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Huang L, Rosado AS, Wright A, Corrêa RS, Silva L, Mazza Rodrigues JL. Microbiota recovery in a chronosquences of impoverished Cerrado soils with biosolids applications. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 931:172958. [PMID: 38714255 DOI: 10.1016/j.scitotenv.2024.172958] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Revised: 04/25/2024] [Accepted: 05/01/2024] [Indexed: 05/09/2024]
Abstract
Mining activities put the Brazilian savannas, a global biodiversity hotspot, in danger of species and soil carbon losses. Experiments employing biosolids have been applied to rejuvenate this degraded ecosystem, but a lingering question yet to be answered is whether the microbiota that inhabits these impoverished soils can be recovered towards its initial steady state after vegetation recovery. Here, we selected an 18-year-old restoration chronosequence of biosolids-treated, untreated mining and native soils to investigate the soil microbiota recovery based on composition, phylogeny, and diversity, as well as the potential factors responsible for ecosystem recovery. Our results revealed that the soil microbiota holds a considerable recovery potential in the degraded Cerrado biome. Biosolids application not only improved soil health, but also led to 41.7 % recovery of the whole microbial community, featuring significantly higher microbiota diversity and enriched groups (e.g., Firmicutes) that benefit carbon storage compared to untreated mining and native soils. The recovered community showed significant compositional distinctions from the untreated mining or native soils, rather than phylogenetic differences, with physiochemical properties explaining 55 % of the overall community changes. This study advances our understanding of soil microbiota dynamics in response to disturbance and restoration by shedding light on its recovery associated with biosolid application in a degraded biodiverse ecosystem.
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Affiliation(s)
- Laibin Huang
- Department of Biology, Saint Louis University, St. Louis, MO 63103, USA
| | - Alexandre Soares Rosado
- Biological and Environmental Sciences and Engineering (BESE) Division, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955, Saudi Arabia
| | - Alonna Wright
- Genome Center, University of California, Davis, CA 95616, USA
| | - Rodrigo Studart Corrêa
- Postgraduate Program in Environmental Sciences, University of Brasília - UnB/FUP/ PPGCA, Brasília, DF 70910, Brazil
| | - Lucas Silva
- Environmental Studies Program, Department of Geography, Institute of Ecology and Evolution, University of Oregon, Eugene 97403, USA
| | - Jorge L Mazza Rodrigues
- Department of Land, Air, and Water Resources, University of California, Davis, CA 95616, USA; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
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Ellison RJ, Horwath WR. Reducing greenhouse gas emissions and stabilizing nutrients from dairy manure using chemical coagulation. JOURNAL OF ENVIRONMENTAL QUALITY 2021; 50:375-383. [PMID: 33410151 DOI: 10.1002/jeq2.20195] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2020] [Accepted: 12/28/2020] [Indexed: 06/12/2023]
Abstract
Two primary concerns of dairies that store manure wastewater in anaerobic ponds are greenhouse gas (GHG) emissions and unpredictable nutrient availability after applying it to forage crops. Solid-liquid separation of dairy manure wastewater with chemical coagulants significantly reduces the fraction of organic matter stored in anaerobic conditions. However, the effects of coagulants on methane emissions from ponds and nutrient availability following field application are not well understood. In this experiment, several metal salts and organic polymers were used to coagulate dairy manure wastewater for separation into solid (floc) and liquid (effluent) fractions. The coagulants tested were ferric sulfate, ferric chloride, polyaluminum chloride, Superfloc C-569, and chitosan. An anaerobic incubation of manure effluent to simulate liquid manure storage and an aerobic incubation of manure floc-amended soil to simulate field application were conducted with analysis of GHGs and carbon and nitrogen transformations. The treatment of chemically separating organic matter from manure wastewater effectively eliminated methane emissions under anaerobic conditions in the laboratory. In the solid manure fraction, organic carbon was stabilized in the chemically separated flocs, and, apart from flocs produced with ferric iron, nitrogen mineralization was reduced as well. Carbon dioxide emissions were also reduced from the flocs applied to soil compared with untreated manure solids.
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Affiliation(s)
- Rylie J Ellison
- Dep. of Land, Air, & Water Resources, Univ. of California, 1110 Plant & Environmental Sciences Building, Davis, CA, 95616, USA
| | - William R Horwath
- Dep. of Land, Air, & Water Resources, Univ. of California, 1110 Plant & Environmental Sciences Building, Davis, CA, 95616, USA
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Silva LCR, Corrêa RS, Wright JL, Bomfim B, Hendricks L, Gavin DG, Muniz AW, Martins GC, Motta ACV, Barbosa JZ, Melo VDF, Young SD, Broadley MR, Santos RV. A new hypothesis for the origin of Amazonian Dark Earths. Nat Commun 2021; 12:127. [PMID: 33397930 PMCID: PMC7782733 DOI: 10.1038/s41467-020-20184-2] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Accepted: 10/29/2020] [Indexed: 11/09/2022] Open
Abstract
Amazonian Dark Earths (ADEs) are unusually fertile soils characterised by elevated concentrations of microscopic charcoal particles, which confer their distinctive colouration. Frequent occurrences of pre-Columbian artefacts at ADE sites led to their ubiquitous classification as Anthrosols (soils of anthropic origin). However, it remains unclear how indigenous peoples created areas of high fertility in one of the most nutrient-impoverished environments on Earth. Here, we report new data from a well-studied ADE site in the Brazilian Amazon, which compel us to reconsider its anthropic origin. The amounts of phosphorus and calcium-two of the least abundant macronutrients in the region-are orders of magnitude higher in ADE profiles than in the surrounding soil. The elevated levels of phosphorus and calcium, which are often interpreted as evidence of human activity at other sites, correlate spatially with trace elements that indicate exogenous mineral sources rather than in situ deposition. Stable isotope ratios of neodymium, strontium, and radiocarbon activity of microcharcoal particles also indicate exogenous inputs from alluvial deposition of carbon and mineral elements to ADE profiles, beginning several thousands of years before the earliest evidence of soil management for plant cultivation in the region. Our data suggest that indigenous peoples harnessed natural processes of landscape formation, which led to the unique properties of ADEs, but were not responsible for their genesis. If corroborated elsewhere, this hypothesis would transform our understanding of human influence in Amazonia, opening new frontiers for the sustainable use of tropical landscapes going forward.
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Affiliation(s)
- Lucas C R Silva
- Environmental Studies Program, University of Oregon, Eugene, OR, USA. .,Department of Geography, University of Oregon, Eugene, OR, USA.
| | - Rodrigo Studart Corrêa
- Environmental Sciences Program - PPGCA/FUP, University of Brasília, Planaltina, DF, Brazil
| | - Jamie L Wright
- Environmental Studies Program, University of Oregon, Eugene, OR, USA
| | - Barbara Bomfim
- Environmental Studies Program, University of Oregon, Eugene, OR, USA.,Lawrence Berkeley National Laboratory, Berkeley, CA, USA
| | | | - Daniel G Gavin
- Department of Geography, University of Oregon, Eugene, OR, USA
| | | | - Gilvan Coimbra Martins
- Brazilian Agricultural Research Corporation - CPAA/Embrapa Amazônia Ocidental, Manaus, AM, Brazil
| | | | | | | | - Scott D Young
- School of Biosciences, University of Nottingham, Nottingham, UK
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Wright JL, Bomfim B, Wong CI, Marimon-Júnior BH, Marimon BS, Silva LCR. Sixteen hundred years of increasing tree cover prior to modern deforestation in Southern Amazon and Central Brazilian savannas. GLOBAL CHANGE BIOLOGY 2021; 27:136-150. [PMID: 33128306 DOI: 10.1111/gcb.15382] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Accepted: 08/31/2020] [Indexed: 06/11/2023]
Abstract
Tropical ecosystems are under increasing pressure from land-use change and deforestation. Changes in tropical forest cover are expected to affect carbon and water cycling with important implications for climatic stability at global scales. A major roadblock for predicting how tropical deforestation affects climate is the lack of baseline conditions (i.e., prior to human disturbance) of forest-savanna dynamics. To address this limitation, we developed a long-term analysis of forest and savanna distribution across the Amazon-Cerrado transition of central Brazil. We used soil organic carbon isotope ratios as a proxy for changes in woody vegetation cover over time in response to fluctuations in precipitation inferred from speleothem oxygen and strontium stable isotope records. Based on stable isotope signatures and radiocarbon activity of organic matter in soil profiles, we quantified the magnitude and direction of changes in forest and savanna ecosystem cover. Using changes in tree cover measured in 83 different locations for forests and savannas, we developed interpolation maps to assess the coherence of regional changes in vegetation. Our analysis reveals a broad pattern of woody vegetation expansion into savannas and densification within forests and savannas for at least the past ~1,600 years. The rates of vegetation change varied significantly among sampling locations possibly due to variation in local environmental factors that constrain primary productivity. The few instances in which tree cover declined (7.7% of all sampled profiles) were associated with savannas under dry conditions. Our results suggest a regional increase in moisture and expansion of woody vegetation prior to modern deforestation, which could help inform conservation and management efforts for climate change mitigation. We discuss the possible mechanisms driving forest expansion and densification of savannas directly (i.e., increasing precipitation) and indirectly (e.g., decreasing disturbance) and suggest future research directions that have the potential to improve climate and ecosystem models.
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Affiliation(s)
- Jamie L Wright
- Environmental Studies Program, Institute of Ecology & Evolution, University of Oregon, Eugene, OR, USA
| | - Barbara Bomfim
- Environmental Studies Program, Institute of Ecology & Evolution, University of Oregon, Eugene, OR, USA
- Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
| | - Corrine I Wong
- Department of Geological Sciences, University of Texas, Austin, TX, USA
| | - Ben H Marimon-Júnior
- Laboratório de Ecologia Vegetal, State University of Mato Grosso, Nova Xavantina, Brazil
| | - Beatriz S Marimon
- Laboratório de Ecologia Vegetal, State University of Mato Grosso, Nova Xavantina, Brazil
| | - Lucas C R Silva
- Environmental Studies Program, Institute of Ecology & Evolution, University of Oregon, Eugene, OR, USA
- Department of Geography, University of Oregon, Eugene, OR, USA
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Albuquerque N, Meehan B, Hughes J, Surapaneni A. Determination of total carbon in biosolids using MID-infrared spectroscopy. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 698:134195. [PMID: 31505338 DOI: 10.1016/j.scitotenv.2019.134195] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2019] [Revised: 08/28/2019] [Accepted: 08/28/2019] [Indexed: 06/10/2023]
Abstract
This study was designed to determine if MID-Infrared (MID-IR) spectroscopy combined with Partial Least Squares (PLS) modelling could be used to predict total carbon (C) in biosolids generated from wastewater treatment plants. Biosolids samples were selected and analysed for total C, and MID-IR spectra were recorded. Using the total C and MID-IR data, a PLS model was developed using both the full spectral range and selected wavelengths regions. The PLS modelling showed that an R2 of 0.97 was achieved for both approaches. To validate the modelling, PLS prediction was applied to a randomly selected validation set of 20 samples and prediction uncertainties determined using The Unscrambler software. A prediction error (or uncertainty) of approximately ±2% carbon was achieved using both full spectra and selected wavelengths regions. Based on the results of the study, MID-IR combined with PLS could be used as an alternate and inexpensive method to determine the total C of biosolids compared to conventional methods such as the Dumas combustion method using a LECO C analyser.
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Affiliation(s)
- N Albuquerque
- School of Science, RMIT University, GPO Box 2476, Melbourne 3001, Victoria, Australia
| | - B Meehan
- School of Science, RMIT University, GPO Box 2476, Melbourne 3001, Victoria, Australia
| | - J Hughes
- School of Science, RMIT University, GPO Box 2476, Melbourne 3001, Victoria, Australia.
| | - A Surapaneni
- South East Water Corporation, Water's Edge, 101 Wells Street, Frankston 3199, Victoria, Australia
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Liang YL, Kraus TEC, Silva LCR, Bachand PAM, Bachand SM, Doane TA, Horwath WR. Effects of ferric sulfate and polyaluminum chloride coagulation enhanced treatment wetlands on Typha growth, soil and water chemistry. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 648:116-124. [PMID: 30118934 DOI: 10.1016/j.scitotenv.2018.07.341] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2018] [Revised: 07/23/2018] [Accepted: 07/24/2018] [Indexed: 06/08/2023]
Abstract
Land surface subsidence is a concern in many deltas worldwide as it contributes to water quality degradation, loss of fertile land and increased potential for levee failure. As a possible solution to these concerns, on-site coagulation enhanced treatment wetlands (CETWs), coagulation water treatment followed by wetland passage serving as a settling basin, were implemented in a field-scale study located on a subsided island of the Sacramento-San Joaquin Delta in northern California under three treatments; coagulation with polyaluminum chloride (PAC), coagulation with ferric sulfate and an untreated control. Because CETWs offer a relatively novel solution for water quality improvement and subsidence reversal due to its low-infrastructure requirements and in-situ nature, effects from these systems remain uncharted and they may have adverse effects on plant biomass production that also contribute to sediment accretion. This study focuses on the effect CETWs had on the growth of Typha spp.; the dominant vegetation in the wetlands. Plant growth parameters and nutrient content were measured in conjunction with soil, pore water and surface water chemistry. Soil analysis indicated there was no intermixing of newly formed flocs and original soil material. Where there was significant deposition of floc, PAC treatment reduced phosphate concentrations and ferric sulfate treatment increased total Fe concentrations in surrounding water compared to the control. Results indicated coagulation treatments had no negative effects on Typha leaf nutrient content, Typha growth or allometric parameters. Additionally, no signs of plant toxicity such as necrosis, wilting or chlorosis were observed in any of the treatments. Overall, this study suggests that CETWs are viable treatment option for water quality improvement and sediment accretion while having no negative impact on the growth of Typha plants.
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Affiliation(s)
- Yan Ling Liang
- Department of Land, Air, and Water Resources, 1 Shields Avenue, University of California Davis, Davis, CA 95616, USA.
| | - Tamara E C Kraus
- United States Geological Survey California Water Science Center, 6000 J Street Placer Hall, Sacramento, CA 95819, USA.
| | - Lucas C R Silva
- Department of Land, Air, and Water Resources, 1 Shields Avenue, University of California Davis, Davis, CA 95616, USA; Environmental Studies Program, Department of Geography, Institute of Ecology & Evolution, University of Oregon, 1585 E 13th Ave, Eugene, OR 97403, USA.
| | | | | | - Timothy A Doane
- Department of Land, Air, and Water Resources, 1 Shields Avenue, University of California Davis, Davis, CA 95616, USA.
| | - William R Horwath
- Department of Land, Air, and Water Resources, 1 Shields Avenue, University of California Davis, Davis, CA 95616, USA.
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Hot Spots and Hot Moments of Soil Moisture Explain Fluctuations in Iron and Carbon Cycling in a Humid Tropical Forest Soil. SOIL SYSTEMS 2018. [DOI: 10.3390/soilsystems2040059] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Soils from humid forests undergo spatial and temporal variations in moisture and oxygen (O2) in response to rainfall, and induce changes in iron (Fe) and carbon (C) biogeochemistry. We hypothesized that high rainfall periods stimulate Fe and C cycling, with the greatest effects in areas of high soil moisture. To test this, we measured Fe and C cycling across three catenas at valley, slope, and ridge positions every two days for a two-month period in a rainforest in Puerto Rico. Over 12 days without rain, soil moisture, FeII, rapidly reducible Fe oxides (FeIIIRR), and dissolved organic C (DOC) declined, but Eh and O2 increased; conversely, during a 10-day period of intense rain (290 mm), we observed the opposite trends. Mixed-effects models suggest precipitation predicted soil moisture, soil redox potential (Eh), and O2, which in turn influenced Fe reduction/oxidation, C dissolution, and mineralization processes. The approximate turnover time for HCl-extractable FeII was four days for both production and consumption, and may be driven by fluctuations in FeIIIRR, which ranged from 42% to 100% of citrate–ascorbate-extractable FeIII (short-range order (SRO)-FeIII) at a given site. Our results demonstrated that periods of high precipitation (hot moments) influenced Fe and C-cycling within day-to-week timescales, and were more pronounced in humid valleys (hot spots).
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Abstract
The tremendous reservoir of soil organic carbon (SOC) in wetlands is being threatened by water-table decline (WTD) globally. However, the SOC response to WTD remains highly uncertain. Here we examine the under-investigated role of iron (Fe) in mediating soil enzyme activity and lignin stabilization in a mesocosm WTD experiment in an alpine wetland. In contrast to the classic ‘enzyme latch’ theory, phenol oxidative activity is mainly controlled by ferrous iron [Fe(II)] and declines with WTD, leading to an accumulation of dissolvable aromatics and a reduced activity of hydrolytic enzyme. Furthermore, using dithionite to remove Fe oxides, we observe a significant increase of Fe-protected lignin phenols in the air-exposed soils. Fe oxidation hence acts as an ‘iron gate’ against the ‘enzyme latch’ in regulating wetland SOC dynamics under oxygen exposure. This newly recognized mechanism may be key to predicting wetland soil carbon storage with intensified WTD in a changing climate. The response of soil organic carbon in wetlands to water-table decline remains uncertain. Here, the authors examine the role of iron in mediating soil enzyme activity and lignin stabilization and find that iron protecting lignin phenols in soils exposed to air acts as an iron gate against the enzyme latch.
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