1
|
Wang D, Yang H, Ma S, Liu T, Yan M, Dong M, Zhang M, Zhang T, Zhang X, Xu L, Huang X, Chen H. Transcriptomic Changes and Regulatory Networks Associated with Resistance to Mastitis in Xinjiang Brown Cattle. Genes (Basel) 2024; 15:465. [PMID: 38674399 PMCID: PMC11049461 DOI: 10.3390/genes15040465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2024] [Revised: 03/29/2024] [Accepted: 04/01/2024] [Indexed: 04/28/2024] Open
Abstract
Xinjiang brown cattle are highly resistant to disease and tolerant of roughage feeding. The identification of genes regulating mastitis resistance in Xinjiang brown cattle is a novel means of genetic improvement. In this study, the blood levels of IL-1β, IL-6, IL-10, TNF-α, and TGF-β in Xinjiang brown cattle with high and low somatic cell counts (SCCs) were investigated, showing that cytokine levels were higher in cattle with high SCCs. The peripheral blood transcriptomic profiles of healthy and mastitis-affected cattle were constructed by RNA-seq. Differential expression analysis identified 1632 differentially expressed mRNAs (DE-mRNAs), 1757 differentially expressed lncRNAs (DE-lncRNAs), and 23 differentially expressed circRNAs (DE-circRNAs), which were found to be enriched in key pathways such as PI3K/Akt, focal adhesion, and ECM-receptor interactions. Finally, ceRNA interaction networks were constructed using the differentially expressed genes and ceRNAs. It was found that keynote genes or mRNAs were also enriched in pathways such as PI3K-Akt, cholinergic synapses, cell adhesion molecules, ion binding, cytokine receptor activity, and peptide receptor activity, suggesting that the key genes and ncRNAs in the network may play an important role in the regulation of bovine mastitis.
Collapse
Affiliation(s)
- Dan Wang
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Haiyan Yang
- College of Animal Science and Technology, Northwest A&F University, Yangling, Xianyang 712100, China;
| | - Shengchao Ma
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Tingting Liu
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Mengjie Yan
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Mingming Dong
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Menghua Zhang
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Tao Zhang
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Xiaoxue Zhang
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Lei Xu
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Xixia Huang
- College of Animal Science, Xinjiang Agricultural University, Urumqi 830091, China; (D.W.); (S.M.); (T.L.); (M.Y.); (M.D.); (M.Z.); (T.Z.); (X.Z.); (L.X.)
| | - Hong Chen
- College of Animal Science and Technology, Northwest A&F University, Yangling, Xianyang 712100, China;
| |
Collapse
|
2
|
Choudhary RK, Olszanski L, McFadden TB, Lalonde C, Spitzer A, Shangraw EM, Rodrigues RO, Zhao FQ. Systemic and local responses of cytokines and tissue histology following intramammary lipopolysaccharide challenge in dairy cows. J Dairy Sci 2024; 107:1299-1310. [PMID: 37777007 DOI: 10.3168/jds.2023-23543] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Accepted: 09/14/2023] [Indexed: 10/02/2023]
Abstract
During bovine mastitis, immune responses include the release of cytokines and the recruitment of leukocytes, resulting in profound structural and functional changes in the mammary gland. Our aims were to delineate systemic and local cytokine responses and to quantify histological changes in the mammary tissue of lactating cows after acute intramammary lipopolysaccharide (LPS) challenge. Ten multiparous dairy cows were paired to either treatment (TRT) or control (CON) groups. For TRT cows, one side of the udder was randomly assigned to receive treatment with LPS (50 µg in 10 mL of saline, TL) into both the front and rear quarters; the contralateral quarters received saline (10 mL). Udder-halves of CON cows were similarly assigned randomly to receive either saline (10 mL, CS) or no infusion (untreated). Temporal changes in the concentrations of 15 cytokines in the blood (0, 3, 6, 12, and 24 h relative to the LPS infusion) and in mammary tissue (0, 3, and 12 h) were determined, as were concomitant changes in mammary histology. The cytokines IL-6, IL-10, MCP-1, and MIP-1β showed a systemic response as their concentrations were significantly different in the plasma of TRT cows as compared with CON cows after LPS challenge. The cytokines IL-1α, IL-1β, IL-6, IL-8, IL-17A, IL-36RA, IP-10, MCP-1, MIP-1α, MIP-1β, TNF-α, and VEGF-A showed a local response in TL glands, and 8 cytokines, IL-1β, IL-6, IL-10, IL-17A, IL-36RA, IP-10, MIP-1β, and VEGF-A showed systemic changes in the nonchallenged mammary glands adjacent to LPS-infused glands. Endotoxin challenge evoked changes in the histology of mammary tissue that included a 5.2- and 7.2-fold increases in the number of neutrophils in alveolar lumens at 3 h and 12 h, respectively. In summary, LPS challenge induced specific local and systemic responses in cytokine induction and elicited neutrophil infiltration in bovine mammary tissue.
Collapse
Affiliation(s)
- Ratan K Choudhary
- Department of Animal and Veterinary Sciences, University of Vermont, Burlington, VT 05405
| | - Laura Olszanski
- Department of Animal and Veterinary Sciences, University of Vermont, Burlington, VT 05405
| | - Thomas B McFadden
- Division of Animal Sciences, University of Missouri, Columbia, MO 65211
| | - Christian Lalonde
- Department of Animal and Veterinary Sciences, University of Vermont, Burlington, VT 05405
| | - Alexander Spitzer
- Department of Animal and Veterinary Sciences, University of Vermont, Burlington, VT 05405
| | - Erin M Shangraw
- Division of Animal Sciences, University of Missouri, Columbia, MO 65211
| | | | - Feng-Qi Zhao
- Department of Animal and Veterinary Sciences, University of Vermont, Burlington, VT 05405.
| |
Collapse
|
3
|
Mahala S, Kumar A, Pandey HO, Saxena S, Khanna S, Kumar M, Kumar D, De UK, Pandey AK, Dutt T. Milk exosomal microRNA profiling identified miR-375 and miR-199-5p for regulation of immune response during subclinical mastitis of crossbred cattle. Mol Biol Rep 2024; 51:59. [PMID: 38165514 DOI: 10.1007/s11033-023-09070-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Accepted: 11/10/2023] [Indexed: 01/03/2024]
Abstract
BACKGROUND The dairy industry has experienced significant economic losses as a result of mastitis, an inflammatory disease of cows, including both subclinical and clinical cases. Milk exosome microRNAs have gained attention due to their stable and selective wrapping nature, offering potential for the prognosis and diagnosis of bovine mastitis, the most common pathological condition of the mammary gland. METHODS AND RESULTS In the present investigation, the microRNA profile of milk exosomes was explored using high-throughput small RNA sequencing data in sub-clinical mastitic and healthy crossbred Vrindavani cattle. In both groups, 349 microRNAs were identified, with 238 (68.19%) microRNAs co-expressed; however, 35 and 76 distinct microRNAs were found in subclinical mastitic and healthy cattle, respectively. Differential expression analysis revealed 11 microRNAs upregulated, and 18 microRNAs were downregulated in sub-clinical mastitic cattle. The functional annotation of the target genes of differentially expressed known and novel microRNAs including bta-miR-375, bta-miR-199-5p and bta-miR-12030 reveals their involvement in the regulation of immune response and inflammatory mechanisms and could be involved in development of mastitis. CONCLUSIONS The analysis of milk exosomal miRNAs cargos hold great promise as an approach to study the underlying molecular mechanisms associated with mastitis in high milk producing dairy cattle. Concurrently, the significantly downregulated miR-375 may upregulate key target genes, including CTLA4, IHH, IRF1, and IL7R. These genes are negative regulators of immune response pathways, which could be associated with impaired inflammatory mechanisms in mammary cells. According to the findings, bta-miR-375 could be a promising biomarker for the development of mastitis in dairy cattle.
Collapse
Affiliation(s)
- Sudarshan Mahala
- Animal Genetics Division, Indian Council of Agricultural Research (ICAR)-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - Amit Kumar
- Animal Genetics Division, Indian Council of Agricultural Research (ICAR)-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India.
| | - Hari Om Pandey
- Livestock Production and Management Section, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, Uttar Pradesh, 243122, India
| | - Shikha Saxena
- Animal Genetics Division, Indian Council of Agricultural Research (ICAR)-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - Shivani Khanna
- Animal Genetics Division, Indian Council of Agricultural Research (ICAR)-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - Manoj Kumar
- Animal Genetics Division, Indian Council of Agricultural Research (ICAR)-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - Deepak Kumar
- Veterinary Biotechnology Division, Indian Council of Agricultural Research (ICAR)-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - Ujjwal Kumar De
- Medicine Division, Indian Council of Agricultural Research (ICAR)-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - Ashwni Kumar Pandey
- Animal Genetics Division, Indian Council of Agricultural Research (ICAR)-Indian Veterinary Research Institute, Bareilly, Uttar Pradesh, 243122, India
| | - Triveni Dutt
- Livestock Production and Management Section, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, Uttar Pradesh, 243122, India
| |
Collapse
|
4
|
Shandilya UK, Sharma A, Xu R, Muniz MMM, Karrow NA. Evaluation of Immunomodulatory Effects of Fusarium Mycotoxins Using Bacterial Endotoxin-Stimulated Bovine Epithelial Cells and Macrophages in Co-Culture. Genes (Basel) 2023; 14:2014. [PMID: 38002956 PMCID: PMC10671659 DOI: 10.3390/genes14112014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 10/20/2023] [Accepted: 10/26/2023] [Indexed: 11/26/2023] Open
Abstract
Mycotoxins are secondary metabolites produced by a variety of fungi that contaminate animal food and feeds and are capable of inducing a wide range of toxicities. Predictive in vitro models represent valuable substitutes for animal experiments to assess the toxicity of mycotoxins. The complexities of the interactions between epithelial and innate immune cells, vital for upholding barrier integrity and averting infections, remain inadequately understood. In the current study, a co-culture model of bovine epithelial cells (MAC-T) and macrophages (BoMac) was used to investigate the impact of exposure to Fusarium mycotoxins, namely deoxynivalenol (DON), zearalenone (ZEN), enniatin B (ENB), and beauvericin (BEA), on the inflammatory response elicited by the bacterial lipopolysaccharide (LPS) endotoxin. The MAC-T cells and BoMac were seeded on the apical side of a Transwell membrane and in the lower chamber, respectively, and mycotoxin exposure on the apical side of the membrane was carried out with the different mycotoxins (LC20; concentrations that elicited 20% cytotoxicity) for 48 h followed by an LPS immunity challenge for 24 h. The culture supernatants were collected from the basolateral compartment and these samples were submitted for cytokine/chemokine multiplex analysis. RNA-Seq analysis was performed using total RNA extracted from the MAC-T cells to acquire a more detailed insight into their cellular functions. The multiplex analysis indicated that IFN-γ, IL-1α, IL-8, and MCP-1 were significantly induced post-DON treatment when compared to control cells, and levels of IL-1α and IL-8 were enhanced significantly in all mycotoxin-treated groups post-LPS challenge. Analysis of the sequencing results showed that there were 341, 357, and 318 differentially expressed MAC-T cell genes that were up-regulated in the DON, ENB, and BEA groups, respectively. Gene ontology and pathway analysis revealed that these DEGs were significantly enriched in various biological processes and pathways related to inflammation, apoptosis signaling, and Wnt signaling. These results provide a comprehensive analysis of the co-culture cytokine/chemokine production and MAC-T cells' gene expression profiles elicited by Fusarium mycotoxins, which further contributes to the understanding of early endotoxemia post-mycotoxin exposure.
Collapse
Affiliation(s)
| | | | | | | | - Niel A. Karrow
- Department of Animal Biosciences, University of Guelph, 50 Stone Rd. E., Guelph, ON N1G2W1, Canada; (U.K.S.); (A.S.); (R.X.); (M.M.M.M.)
| |
Collapse
|
5
|
Zhou M, Barkema HW, Gao J, Yang J, Wang Y, Kastelic JP, Khan S, Liu G, Han B. MicroRNA miR-223 modulates NLRP3 and Keap1, mitigating lipopolysaccharide-induced inflammation and oxidative stress in bovine mammary epithelial cells and murine mammary glands. Vet Res 2023; 54:78. [PMID: 37710276 PMCID: PMC10503159 DOI: 10.1186/s13567-023-01206-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 08/12/2023] [Indexed: 09/16/2023] Open
Abstract
Bovine mastitis, the most prevalent and costly disease in dairy cows worldwide, decreases milk quality and quantity, and increases cow culling. However, involvement of microRNAs (miRNAs) in mastitis is not well characterized. The objective was to determine the role of microRNA-223 (miR-223) in regulation of the nucleotide-binding oligomerization domain-like receptor containing pyrin domain 3 (NLRP3) inflammasome and kelch like ECH-associated protein 1 (Keap1)/nuclear factor erythroid 2-related factor 2 (Nrf2) oxidative stress pathway in mastitis models induced by lipopolysaccharide (LPS) treatment of immortalized bovine mammary epithelial cells (bMECs) and murine mammary glands. In bMECs cultured in vitro, LPS-induced inflammation downregulated bta-miR-223; the latter interacted directly with the 3' untranslated region (3' UTR) of NLRP3 and Keap1. Overexpression of bta-miR-223 in bMECs decreased LPS and Adenosine 5'-triphosphate (ATP)-induced NLRP3 and its mediation of caspase 1 and IL-1β, and inhibited LPS-induced Keap1 and Nrf2 mediated oxidative stress, whereas inhibition of bta-miR-223 had opposite effects. In an in vivo murine model of LPS-induced mastitis, increased miR-223 mitigated pathology in the murine mammary gland, whereas decreased miR-223 increased inflammatory changes and oxidative stress. In conclusion, bta-miR-223 mitigated inflammation and oxidative injury by downregulating the NLRP3 inflammasome and Keap1/Nrf2 signaling pathway. This study implicated bta-miR-223 in regulation of inflammatory responses, with potential as a novel target for treating bovine mastitis and other diseases.
Collapse
Affiliation(s)
- Man Zhou
- Department of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, 100193, China
| | - Herman W Barkema
- Faculty of Veterinary Medicine, University of Calgary, Calgary, AB, T2N 4N1, Canada
| | - Jian Gao
- Department of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, 100193, China
| | - Jingyue Yang
- Department of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, 100193, China
| | - Yue Wang
- Department of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, 100193, China
| | - John P Kastelic
- Faculty of Veterinary Medicine, University of Calgary, Calgary, AB, T2N 4N1, Canada
| | - Sohrab Khan
- Department of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, 100193, China
| | - Gang Liu
- Department of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, 100193, China.
| | - Bo Han
- Department of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing, 100193, China.
| |
Collapse
|
6
|
Sadovnikova A, Garcia SC, Trott JF, Mathews AT, Britton MT, Durbin-Johnson BP, Hovey RC. Transcriptomic changes underlying glucocorticoid-induced suppression of milk production by dairy cows. Front Genet 2022; 13:1072853. [PMID: 36561310 PMCID: PMC9763454 DOI: 10.3389/fgene.2022.1072853] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Accepted: 11/23/2022] [Indexed: 12/12/2022] Open
Abstract
Milk production by dairy cows is sensitive to increased levels of stress hormones such as glucocorticoids (GC) that also regulate the transcription of several genes required for milk synthesis. Whereas previous studies identified that an exogenous GC such as dexamethasone (DEX) transiently suppresses milk yield in several species without any pronounced effect on milk protein or fat percentage, the mechanism underlying this effect has not been established. In this study we sought to establish changes within the mammary glands of non-pregnant dairy cows in their second lactation (n = 3-4; 648-838 kg) following a single dose of exogenous DEX. Changes in the udder were monitored by serial biopsy of alternating quarters, concurrent with quarter-level monitoring of milk yield and composition. Dexamethasone increased serum glucose levels from 12-36 h (p <0 .05), reduced milk yield from 12-48 h (p <0 .05), increased % milk protein content at 24 h post-DEX, and transiently decreased both milk lactose and α-lactalbumin content, while not altering the level of milk fat. After 72 h, all aspects of milk production had returned to pre-treatment levels. Transcriptomic changes in the mammary glands in response to DEX were identified by RNA sequencing followed by differential gene expression analysis. Coincident with the milk yield and composition changes was the differential expression of 519 and 320 genes at 12 and 24 h after DEX (adjusted p <0 .05), respectively, with the return of all gene expression to baseline levels by 72 h. Among the transcriptomic changes in response to DEX, there was notable downregulation of elements in the lactose synthesis pathway, specifically AQP3, GALE and LALBA (α-lactalbumin) at 12 h, and sustained downregulation of LALBA at 24 h. One gene in the pathway, UGP2, was upregulated at 12-24 h post-DEX. This work supports the hypothesis that there is a direct relationship between the response to DEX and the concurrent suppression of milk yield due to the reduced synthesis of α-lactalbumin and lactose by the mammary epithelium. The ability of glucocorticoids to modulate the homeorrhetic requirements for glucose during stressful states concurrent with immune activation bears significance for dairy animals as well as a broad range of lactating mammals.
Collapse
Affiliation(s)
- Anna Sadovnikova
- Department of Animal Science, University of California, Davis, Davis, CA, United States,School of Medicine, University of California, Davis, Sacramento, CA, United States
| | - Sergio C. Garcia
- School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, Australia
| | - Josephine F. Trott
- Department of Animal Science, University of California, Davis, Davis, CA, United States
| | - Alice T. Mathews
- Department of Animal Science, University of California, Davis, Davis, CA, United States
| | - Monica T. Britton
- UC Davis Bioinformatics Core, University of California, Davis, Davis, CA, United States
| | | | - Russell C. Hovey
- Department of Animal Science, University of California, Davis, Davis, CA, United States,*Correspondence: Russell C. Hovey,
| |
Collapse
|
7
|
Shangraw EM, McFadden TB. Graduate Student Literature Review: Systemic mediators of inflammation during mastitis and the search for mechanisms underlying impaired lactation. J Dairy Sci 2021; 105:2718-2727. [PMID: 34955254 DOI: 10.3168/jds.2021-20776] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2021] [Accepted: 11/01/2021] [Indexed: 12/17/2022]
Abstract
The negative effect of mastitis on lactation is well established, yet the mechanisms causing reduced milk production in the afflicted dairy cow are not. As one of the major inflammatory diseases in the dairy industry, mastitis has rightly received considerable research interest for decades. However, the focus on distinct, pathologic effects in mastitic glands has largely overlooked systemic effects on noninflamed mammary glands. This is particularly evident in the severe, acute response to the potent inflammatory mediator, lipopolysaccharide (LPS). Whereas secretory cell death, impaired tight junctions, and migration of leukocytes are locally restricted to an inflamed, LPS-challenged gland, changes in milk yield and milk components may be detectable in all mammary glands. Further, these differences extend to the mammary transcriptome. Notably, few transcriptomic studies have been designed to test for effects of systemic mediators of inflammation on gene expression. Relevant changes in the noninflamed mammary gland, identified through biochemical analyses and transcriptional studies, warrant further research. Current evidence suggests proinflammatory cytokines play a role in regulating lactose synthesis, but additional candidates and mechanisms continue to be identified. Ultimately, understanding how systemic mediators of inflammation affect mammary function may lead to the development of interventions that enable more efficient milk production without sacrificing the benefits of inflammation.
Collapse
Affiliation(s)
- E M Shangraw
- Division of Animal Sciences, University of Missouri, Columbia 65211.
| | - T B McFadden
- Division of Animal Sciences, University of Missouri, Columbia 65211
| |
Collapse
|