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Goh G, Vesterdorf K, Fuller A, Blache D, Maloney SK. Optimal sampling interval for characterisation of the circadian rhythm of body temperature in homeothermic animals using periodogram and cosinor analysis. Ecol Evol 2024; 14:e11243. [PMID: 38601852 PMCID: PMC11004550 DOI: 10.1002/ece3.11243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Revised: 03/19/2024] [Accepted: 03/25/2024] [Indexed: 04/12/2024] Open
Abstract
Core body temperature (T c) is a critical aspect of homeostasis in birds and mammals and is increasingly used as a biomarker of the fitness of an animal to its environment. Periodogram and cosinor analysis can be used to estimate the characteristics of the circadian rhythm of T c from data obtained on loggers that have limited memory capacity and battery life. The sampling interval can be manipulated to maximise the recording period, but the impact of sampling interval on the output of periodogram or cosinor analysis is unknown. Some basic guidelines are available from signal analysis theory, but those guidelines have never been tested on T c data. We obtained data at 1-, 5- or 10-min intervals from nine avian or mammalian species, and re-sampled those data to simulate logging at up to 240-min intervals. The period of the rhythm was first analysed using the Lomb-Scargle periodogram, and the mesor, amplitude, acrophase and adjusted coefficient of determination (R 2) from the original and the re-sampled data were obtained using cosinor analysis. Sampling intervals longer than 60 min did not affect the average mesor, amplitude, acrophase or adjusted R 2, but did impact the estimation of the period of the rhythm. In most species, the period was not detectable when intervals longer than 120 min were used. In all individual profiles, a 30-min sampling interval modified the values of the mesor and amplitude by less than 0.1°C, and the adjusted R 2 by less than 0.1. At a 30-min interval, the acrophase was accurate to within 15 min for all species except mice. The adjusted R 2 increased as sampling frequency decreased. In most cases, a 30-min sampling interval provides a reliable estimate of the circadian T c rhythm using periodogram and cosinor analysis. Our findings will help biologists to select sampling intervals to fit their research goals.
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Affiliation(s)
- Grace Goh
- School of Human SciencesThe University of Western AustraliaCrawleyWestern AustraliaAustralia
| | - Kristine Vesterdorf
- School of Human SciencesThe University of Western AustraliaCrawleyWestern AustraliaAustralia
| | - Andrea Fuller
- Brain Function Research Group, School of Physiology, Faculty of Health SciencesUniversity of the WitwatersrandJohannesburgSouth Africa
| | - Dominique Blache
- School of Agriculture and EnvironmentThe University of Western AustraliaCrawleyWestern AustraliaAustralia
| | - Shane K. Maloney
- School of Human SciencesThe University of Western AustraliaCrawleyWestern AustraliaAustralia
- Brain Function Research Group, School of Physiology, Faculty of Health SciencesUniversity of the WitwatersrandJohannesburgSouth Africa
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Hazlerigg DG, Appenroth D, Tomotani BM, West AC, Wood SH. Biological timekeeping in polar environments: lessons from terrestrial vertebrates. J Exp Biol 2023; 226:jeb246308. [PMID: 38031958 DOI: 10.1242/jeb.246308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2023]
Abstract
The polar regions receive less solar energy than anywhere else on Earth, with the greatest year-round variation in daily light exposure; this produces highly seasonal environments, with short summers and long, cold winters. Polar environments are also characterised by a reduced daily amplitude of solar illumination. This is obvious around the solstices, when the Sun remains continuously above (polar 'day') or below (polar 'night') the horizon. Even at the solstices, however, light levels and spectral composition vary on a diel basis. These features raise interesting questions about polar biological timekeeping from the perspectives of function and causal mechanism. Functionally, to what extent are evolutionary drivers for circadian timekeeping maintained in polar environments, and how does this depend on physiology and life history? Mechanistically, how does polar solar illumination affect core daily or seasonal timekeeping and light entrainment? In birds and mammals, answers to these questions diverge widely between species, depending on physiology and bioenergetic constraints. In the high Arctic, photic cues can maintain circadian synchrony in some species, even in the polar summer. Under these conditions, timer systems may be refined to exploit polar cues. In other instances, temporal organisation may cease to be dominated by the circadian clock. Although the drive for seasonal synchronisation is strong in polar species, reliance on innate long-term (circannual) timer mechanisms varies. This variation reflects differing year-round access to photic cues. Polar chronobiology is a productive area for exploring the adaptive evolution of daily and seasonal timekeeping, with many outstanding areas for further investigation.
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Affiliation(s)
- David G Hazlerigg
- Arctic Seasonal Timekeeping Initiative (ASTI), Arctic chronobiology and physiology research group, Department of Arctic and Marine Biology, UiT - The Arctic University of Norway, Tromsø NO-9037, Norway
| | - Daniel Appenroth
- Arctic Seasonal Timekeeping Initiative (ASTI), Arctic chronobiology and physiology research group, Department of Arctic and Marine Biology, UiT - The Arctic University of Norway, Tromsø NO-9037, Norway
| | - Barbara M Tomotani
- Arctic Seasonal Timekeeping Initiative (ASTI), Arctic chronobiology and physiology research group, Department of Arctic and Marine Biology, UiT - The Arctic University of Norway, Tromsø NO-9037, Norway
| | - Alexander C West
- Arctic Seasonal Timekeeping Initiative (ASTI), Arctic chronobiology and physiology research group, Department of Arctic and Marine Biology, UiT - The Arctic University of Norway, Tromsø NO-9037, Norway
| | - Shona H Wood
- Arctic Seasonal Timekeeping Initiative (ASTI), Arctic chronobiology and physiology research group, Department of Arctic and Marine Biology, UiT - The Arctic University of Norway, Tromsø NO-9037, Norway
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Boom MP, Lameris TK, Schreven KHT, Buitendijk NH, Moonen S, de Vries PP, Zaynagutdinova E, Nolet BA, van der Jeugd HP, Eichhorn G. Year-round activity levels reveal diurnal foraging constraints in the annual cycle of migratory and non-migratory barnacle geese. Oecologia 2023:10.1007/s00442-023-05386-x. [PMID: 37270441 DOI: 10.1007/s00442-023-05386-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 05/11/2023] [Indexed: 06/05/2023]
Abstract
Performing migratory journeys comes with energetic costs, which have to be compensated within the annual cycle. An assessment of how and when such compensation occurs is ideally done by comparing full annual cycles of migratory and non-migratory individuals of the same species, which is rarely achieved. We studied free-living migratory and resident barnacle geese belonging to the same flyway (metapopulation), and investigated when differences in foraging activity occur, and when foraging extends beyond available daylight, indicating a diurnal foraging constraint in these usually diurnal animals. We compared foraging activity of migratory (N = 94) and resident (N = 30) geese throughout the annual cycle using GPS-transmitters and 3D-accelerometers, and corroborated this with data on seasonal variation in body condition. Migratory geese were more active than residents during most of the year, amounting to a difference of over 370 h over an entire annual cycle. Activity differences were largest during the periods that comprised preparation for spring and autumn migration. Lengthening days during spring facilitated increased activity, which coincided with an increase in body condition. Both migratory and resident geese were active at night during winter, but migratory geese were also active at night before autumn migration, resulting in a period of night-time activity that was 6 weeks longer than in resident geese. Our results indicate that, at least in geese, seasonal migration requires longer daily activity not only during migration but throughout most of the annual cycle, with migrants being more frequently forced to extend foraging activity into the night.
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Affiliation(s)
- Michiel P Boom
- Vogeltrekstation-Dutch Centre for Avian Migration and Demography (NIOO-KNAW), Wageningen, The Netherlands.
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands.
- Theoretical and Computational Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands.
| | - Thomas K Lameris
- NIOZ Royal Netherlands Institute for Sea Research, Den Burg, The Netherlands
| | - Kees H T Schreven
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
- Theoretical and Computational Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
| | - Nelleke H Buitendijk
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
- Theoretical and Computational Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
| | - Sander Moonen
- Wageningen Environmental Reseach (WEnR), Wageningen, The Netherlands
- Institute of Avian Research, Wilhelmshaven, Germany
- Institute for Wetlands and Waterbird Research e.V., Verden (Aller), Germany
| | - Peter P de Vries
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
| | - Elmira Zaynagutdinova
- Department of Vertebrate Zoology, Faculty of Biology, Saint Petersburg State University, St Petersburg, Russia
| | - Bart A Nolet
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
- Theoretical and Computational Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
| | - Henk P van der Jeugd
- Vogeltrekstation-Dutch Centre for Avian Migration and Demography (NIOO-KNAW), Wageningen, The Netherlands
| | - Götz Eichhorn
- Vogeltrekstation-Dutch Centre for Avian Migration and Demography (NIOO-KNAW), Wageningen, The Netherlands
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
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Reider KE, Zerger M, Whiteman HH. Extending the biologging revolution to amphibians: Implantation, extraction, and validation of miniature temperature loggers. JOURNAL OF EXPERIMENTAL ZOOLOGY. PART A, ECOLOGICAL AND INTEGRATIVE PHYSIOLOGY 2022; 337:403-411. [PMID: 34982510 DOI: 10.1002/jez.2575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Revised: 12/13/2021] [Accepted: 12/18/2021] [Indexed: 06/14/2023]
Abstract
Quantifying ectotherm body temperature is important to understand physiological performance under environmental change. The increasing availability of small, commercially-available animal-borne biologgers increases accessibility to high-quality body temperature data. However, amphibians present several challenges to successful datalogger implantation including small body sizes and physiologically active skin. We developed a method for the implantation, extraction, and validation of temperature biologgers in captive salamanders. We assessed the effect of biologger implantation and extraction surgery on body condition. Implantation had no effects on short or long-term body condition. Body condition also did not differ between implant and control groups after datalogger extraction. Biologgers did not alter preferred temperature in a laboratory thermal gradient, indicating that temperature data would not be biased by implantation. We provide detailed recommendations for datalogger placement and refinement of surgical techniques to further improve outcomes, enhance our understanding of fitness, species range limitations, and responses to environmental and climatic change.
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Affiliation(s)
- Kelsey E Reider
- Department of Biological Sciences, Murray State University, Murray, Kentucky, USA
| | - Megan Zerger
- Department of Biological Sciences, Murray State University, Murray, Kentucky, USA
- Watershed Studies Institute, Murray State University, Murray, Kentucky, USA
| | - Howard H Whiteman
- Department of Biological Sciences, Murray State University, Murray, Kentucky, USA
- Watershed Studies Institute, Murray State University, Murray, Kentucky, USA
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Boom MP, van der Jeugd HP, Steffani B, Nolet BA, Larsson K, Eichhorn G. Postnatal growth rate varies with latitude in range-expanding geese: The role of plasticity and day length. J Anim Ecol 2021; 91:417-427. [PMID: 34807466 PMCID: PMC9300058 DOI: 10.1111/1365-2656.13638] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Accepted: 11/09/2021] [Indexed: 11/29/2022]
Abstract
The postnatal growth period is a crucial life stage, with potential lifelong effects on an animal's fitness. How fast animals grow depends on their life-history strategy and rearing environment, and interspecific comparisons generally show higher growth rates at higher latitudes. However, to elucidate the mechanisms behind this gradient in growth rate, intraspecific comparisons are needed. Recently, barnacle geese expanded their Arctic breeding range from the Russian Barents Sea coast southwards, and now also breed along the Baltic and North Sea coasts. Baltic breeders shortened their migration, while barnacle geese breeding along the North Sea stopped migrating entirely. We collected cross-sectional data on gosling tarsus length, head length and body mass, and constructed population-specific growth curves to compare growth rates among three populations (Barents Sea, Baltic Sea and North Sea) spanning 17° in latitude. Growth rate was faster at higher latitudes, and the gradient resembled the latitudinal gradient previously observed in an interspecific comparison of precocial species. Differences in day length among the three breeding regions could largely explain the observed differences in growth rate. In the Baltic, and especially in the Arctic population, growth rate was slower later in the season, most likely because of the stronger seasonal decline in food quality. Our results suggest that differences in postnatal growth rate between the Arctic and temperate populations are mainly a plastic response to local environmental conditions. This plasticity can increase the individuals' ability to cope with annual variation in local conditions, but can also increase the potential to re-distribute and adapt to new breeding environments.
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Affiliation(s)
- Michiel P Boom
- Vogeltrekstation-Dutch Centre for Avian Migration and Demography (NIOO-KNAW), Wageningen, The Netherlands.,Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
| | - Henk P van der Jeugd
- Vogeltrekstation-Dutch Centre for Avian Migration and Demography (NIOO-KNAW), Wageningen, The Netherlands
| | - Boas Steffani
- Vogeltrekstation-Dutch Centre for Avian Migration and Demography (NIOO-KNAW), Wageningen, The Netherlands
| | - Bart A Nolet
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands.,Department of Theoretical and Computational Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
| | - Kjell Larsson
- Kalmar Maritime Academy, Linnaeus University, Kalmar, Sweden
| | - Götz Eichhorn
- Vogeltrekstation-Dutch Centre for Avian Migration and Demography (NIOO-KNAW), Wageningen, The Netherlands.,Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
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