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Tessnow AE, Nagoshi RN, Meagher RL, Gilligan TM, Sadd BM, Carrière Y, Davis HN, Fleischer SJ, Richers K, Palumbo JC, Porter P, Verle Rodrigues JC, Sword GA. Genomic patterns of strain-specific genetic structure, linkage, and selection across fall armyworm populations. BMC Genomics 2025; 26:116. [PMID: 39920597 PMCID: PMC11803928 DOI: 10.1186/s12864-025-11214-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2024] [Accepted: 01/06/2025] [Indexed: 02/09/2025] Open
Abstract
BACKGROUND Molecular genetic approaches have become vital to understanding the evolutionary processes that act on insect pest populations. From mapping the development of resistance to monitoring and predicting pest movement, genomic tools can inform and enhance pest management programs. Here, we used whole genome sequencing population genomics to unravel novel patterns of population structure, linkage, and selection across the genome of a notorious agricultural pest, the fall armyworm. RESULTS Our data strongly support the existence of two genetically distinct strains of fall armyworm in North America, which have previously been referred to as the C-strain and the R-strain. Although these strains have diverged genetically, we find that differentiation is not uniform across the genome. The Z-chromosome appears to drive divergence between strains with high levels of linkage observed across this chromosome. We also show that a region of the Z-chromosome containing a circadian clock gene implicated in allochronic reproductive isolation is under strain-specific selection. Our data indicates that strains differ in their geographic distributions and exhibit distinct patterns of geographic sub-structuring indicative of unique dispersal patterns. We provide the first evidence for nuclear genomic differentiation between the two major overwintering populations of fall armyworm in the US. Finally, our data reveal population-specific patterns of selection on genomic regions containing putative insecticide resistance alleles, which could relate to their biogeography. CONCLUSIONS Our results support the existence of the fall armyworm as a pest dyad in the US, with genetically-distinct strains differing in their population structure, dispersal patterns, and genomic signatures of selection on regions likely involved reproductive isolation and insecticide resistance. These differences should be considered when devising and implementing management strategies.
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Affiliation(s)
- Ashley E Tessnow
- Department of Entomology, Texas A&M University, College Station, TX, United States of America.
| | - Rodney N Nagoshi
- Center for Medical, Agricultural and Veterinary Entomology, Department of Agriculture-Agricultural Research Service, Gainesville, FL, United States of America
| | - Robert L Meagher
- Center for Medical, Agricultural and Veterinary Entomology, Department of Agriculture-Agricultural Research Service, Gainesville, FL, United States of America
| | - Todd M Gilligan
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO, United States of America
| | - Ben M Sadd
- School of Biological Sciences, Illinois State University, Normal, IL, United States of America
| | - Yves Carrière
- Department of Entomology, University of Arizona, Tucson, AZ, United States of America
| | - Holly N Davis
- Texas A&M AgriLife Research and Extension, Weslaco, TX, United States of America
| | - Shelby J Fleischer
- Department of Entomology, The Pennsylvania State University, University Park, PA, United States of America
| | - Kelly Richers
- The Wedge Entomological Research Foundation, Bakersfield, CA, United States of America
| | - John C Palumbo
- Department of Entomology, University of Arizona, Yuma, Arizona, United States of America
| | - Patrick Porter
- Texas A&M AgriLife Research and Extension, Lubbock, TX, United States of America
| | - Jose Carlos Verle Rodrigues
- Insect Management and Molecular Diagnostics Lab, Department of Agriculture - Animal and Plant Health Inspection Service, Edinburg Texas, United States of America
| | - Gregory A Sword
- Department of Entomology, Texas A&M University, College Station, TX, United States of America
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Cramer ME, Hamby KA. Preventative insecticides reduce seedling injury, but do not increase yield in Bt and non-Bt corn grown in the mid-Atlantic. PEST MANAGEMENT SCIENCE 2025. [PMID: 39901597 DOI: 10.1002/ps.8694] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Revised: 01/15/2025] [Accepted: 01/17/2025] [Indexed: 02/05/2025]
Abstract
BACKGROUND Field corn production systems rely on preventative insect management tactics, including hybrids expressing plant-incorporated protectants that are treated with neonicotinoid seed treatments and sometimes in-furrow pyrethroids. While effective seedling pest control can be crucial because of the cost of replanting, these treatments target many of the same pests and may add unnecessary costs for growers. Furthermore, seedling pests in the Mid-Atlantic tend to be sporadic, and preventative insecticides may negatively impact natural enemies. To better understand the value of common preventative tactics, we evaluated pest pressure and compared a neonicotinoid seed treatment (clothianidin) and an in-furrow pyrethroid (bifenthrin) in Bacillus thuringiensis (Bt) and non-Bt corn hybrids. RESULTS In Bt hybrids, the in-furrow pyrethroid did not decrease pest injury, increase stand, or increase yield, while the neonicotinoid seed treatment decreased pest injury and increased stand but did not increase yield. In a non-Bt hybrid, both insecticides decreased pest injury, but neither increased stand or yield. Above- and below-ground pest injury was scarce throughout the study, but even in the site-year with the most extensive injury, insecticides did not result in yield gains. CONCLUSION Implementing efficient economically and environmentally sustainable corn pest management requires a thorough understanding of the contributions of each component of the pest control system. By thoroughly exploring pest pressure in Bt and non-Bt systems, this study shows that preventative insecticide use could be scaled back in many cases, especially given the environmental and economic costs associated with them. © 2025 The Author(s). Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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Affiliation(s)
- Maria E Cramer
- Department of Entomology, University of Maryland, College Park, MD, USA
| | - Kelly A Hamby
- Department of Entomology, University of Maryland, College Park, MD, USA
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Reich MS, Ghouri S, Zabudsky S, Hu L, Le Corre M, Ng’iru I, Benyamini D, Shipilina D, Collins SC, Martins DJ, Vila R, Talavera G, Bataille CP. Trans-Saharan migratory patterns in Vanessa cardui and evidence for a southward leapfrog migration. iScience 2024; 27:111342. [PMID: 39654635 PMCID: PMC11626715 DOI: 10.1016/j.isci.2024.111342] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2024] [Revised: 07/17/2024] [Accepted: 11/05/2024] [Indexed: 12/12/2024] Open
Abstract
Some insects, such as the painted lady butterfly Vanessa cardui, exhibit complex annual migratory cycles spanning multiple generations. Traversing extensive seas or deserts is often a required segment of these migratory journeys. We develop a bioavailable strontium isoscape for Europe and Africa and then use isotope geolocation combining hydrogen and strontium isotopes to estimate the natal origins of painted ladies captured north and south of the Sahara during spring and autumn, respectively. Our findings reveal moderate migratory connectivity across the Sahara characterized by a broad-front, parallel migration. We also report evidence of a leapfrog migration, wherein early autumn migrants from higher latitudes cover greater distances southward than their late autumn counterparts. This work represents a major advancement in understanding insect migratory patterns and connectivity, particularly across extensive barriers, which is essential for understanding population dynamics and predicting the impacts of global change on insect-mediated ecosystem services.
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Affiliation(s)
- Megan S. Reich
- Department of Biology, University of Ottawa, Ottawa, ON, Canada
| | - Sana Ghouri
- Department of Biology, University of Ottawa, Ottawa, ON, Canada
| | | | - Lihai Hu
- Department of Earth and Environmental Sciences, University of Ottawa, Ottawa, ON, Canada
| | - Mael Le Corre
- Department of Archaeology, University of Aberdeen, Aberdeen, UK
- UMR 7209 - AASPE, Muséum national d'Histoire naturelle, Paris, France
| | - Ivy Ng’iru
- Mpala Research Centre, Nanyuki, Laikipia, Kenya
- School of Biosciences, Cardiff University, Cardiff, Wales, UK
- UK Centre for Ecology and Hydrology, Wallingford, Oxfordshire, UK
| | | | - Daria Shipilina
- Department of Ecology and Genetics, Uppsala University, Uppsala, Sweden
| | - Steve C. Collins
- African Butterfly Research Institute, Nairobi, Kenya
- McGuire Center for Lepidoptera and Biodiversity, University of Florida, Gainesville, FL, USA
| | - Dino J. Martins
- Mpala Research Centre, Nanyuki, Laikipia, Kenya
- Turkana Basin Institute, Stony Brook University, Stony Brook, NY, USA
| | - Roger Vila
- Institut de Biologia Evolutiva, CSIC - Universitat Pompeu Fabra, Barcelona, Catalonia, Spain
| | - Gerard Talavera
- Institut Botànic de Barcelona (IBB), CSIC - CMCNB, Barcelona, Catalonia, Spain
| | - Clément P. Bataille
- Department of Biology, University of Ottawa, Ottawa, ON, Canada
- Department of Earth and Environmental Sciences, University of Ottawa, Ottawa, ON, Canada
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Miller AC, Tessnow AE, Meagher RL, Nagoshi RN, Gilligan TM, Sword GA. Assessing fall armyworm ( Spodoptera frugiperda) allochronic behavior as a predictor of local strain composition in United States populations. FRONTIERS IN PLANT SCIENCE 2024; 15:1380624. [PMID: 39512476 PMCID: PMC11540636 DOI: 10.3389/fpls.2024.1380624] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Accepted: 09/24/2024] [Indexed: 11/15/2024]
Abstract
The fall armyworm, Spodoptera frugiperda (J.E. Smith), is comprised of two genetically distinct strains that are morphologically identical yet exhibit differences in their behavior and physiology (C-strain and R-strain). Evidence of ongoing genetic differentiation between strains highlights the importance of considering strain identity in research and management of fall armyworm populations, but the logistical and technical burden of genotyping limits strain-specific applications. Controlled experiments with laboratory colonies have shown that the strains engage in allochronic ("allo" - different, "chronic" - time) mating behavior, with C-strain mating early in the evening (0-5 hours after sunset) and R-strain mating late in the evening (5-10 hours after sunset). Using temporal field collections and genotype data, we show that strain-specific variation in allochronic male mating behavior occurs across Texas and Florida fall armyworm populations, both of which act as primary source populations for annual migrations of this pest into the continental United States. Time of capture in pheromone traps was significantly different between strains in both Texas and Florida, with the R-strain males consistently being collected in the traps late in the night. The C-strain males were generally captured earlier in the night than their R-strain counterparts, though there was notable variation in the timing between nights and across locations. Allochronic behavior in field populations is consistent with previous laboratory studies reporting differences in the timing of mating between the strains, however increased variability in behavior within and across native populations was observed. Although allochronic behavior in local populations may partially contribute to reproductive isolation between the strains, the behavior is not consistent enough to serve as a complete reproductive barrier. Furthermore, the observed variability in behavior both within and between independent sampling events, especially in the C-strain, poses a challenge to the development of models that utilize time of capture as a predictive phenotype for monitoring strain identity in local populations.
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Affiliation(s)
- Andie C. Miller
- Department of Entomology, Texas A&M University, College Station, TX, United States
- Ecology and Evolutionary Biology Interdisciplinary Program, Texas A&M University, College Station, TX, United States
| | - Ashley E. Tessnow
- Department of Entomology, Texas A&M University, College Station, TX, United States
| | - Robert L. Meagher
- Center for Medical, Agricultural, and Veterinary Entomology, United States Department of Agriculture - Agricultural Research Service (USDA-ARS), Gainesville, FL, United States
| | - Rodney N. Nagoshi
- Center for Medical, Agricultural, and Veterinary Entomology, United States Department of Agriculture - Agricultural Research Service (USDA-ARS), Gainesville, FL, United States
| | - Todd M. Gilligan
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO, United States
| | - Gregory A. Sword
- Department of Entomology, Texas A&M University, College Station, TX, United States
- Ecology and Evolutionary Biology Interdisciplinary Program, Texas A&M University, College Station, TX, United States
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Chen H, Wan G, Li J, Ma Y, Reynolds DR, Dreyer D, Warrant EJ, Chapman JW, Hu G. Adaptive migratory orientation of an invasive pest on a new continent. iScience 2023; 26:108281. [PMID: 38187194 PMCID: PMC10767162 DOI: 10.1016/j.isci.2023.108281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Revised: 10/12/2023] [Accepted: 10/18/2023] [Indexed: 01/09/2024] Open
Abstract
Many species of insects undertake long-range, seasonally reversed migrations, displaying sophisticated orientation behaviors to optimize their migratory trajectories. However, when invasive insects arrive in new biogeographical regions, it is unclear if migrants retain (or how quickly they regain) ancestral migratory traits, such as seasonally preferred flight headings. Here we present behavioral evidence that an invasive migratory pest, the fall armyworm moth (Spodoptera frugiperda), a native of the Americas, exhibited locally adaptive migratory orientation less than three years after arriving on a new continent. Specimens collected from China showed flight orientations directed north-northwest in spring and southwest in autumn, and this would promote seasonal forward and return migrations in East Asia. We also show that the driver of the seasonal switch in orientation direction is photoperiod. Our results thus provide a clear example of an invasive insect that has rapidly exhibited adaptive migratory behaviors, either inherited or newly evolved, in a completely alien environment.
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Affiliation(s)
- Hui Chen
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
- Lund Vision Group, Department of Biology, Lund University, Sölvegatan 35, 22362 Lund, Sweden
| | - Guijun Wan
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
| | - Jianchun Li
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
| | - Yibo Ma
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
| | - Don R. Reynolds
- Natural Resources Institute, University of Greenwich, Chatham ME4 4TB, UK
- Rothamsted Research, Harpenden AL5 2JQ, UK
| | - David Dreyer
- Lund Vision Group, Department of Biology, Lund University, Sölvegatan 35, 22362 Lund, Sweden
| | - Eric J. Warrant
- Lund Vision Group, Department of Biology, Lund University, Sölvegatan 35, 22362 Lund, Sweden
| | - Jason W. Chapman
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- Centre for Ecology and Conservation, University of Exeter, Penryn, Cornwall TR10 9FE, UK
- Environment and Sustainability Institute, University of Exeter, Penryn, Cornwall TR10 9FE, UK
| | - Gao Hu
- Department of Entomology, Nanjing Agricultural University, Nanjing 210095, China
- National Key Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing 210095, China
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Nagoshi RN, Davis JA, Meagher RL, Musser FR, Head GP, Portillo H, Teran H. Investigating the Migratory Behavior of Soybean Looper, a Major Pest of Soybean, through Comparisons with the Corn Pest Fall Armyworm Using Mitochondrial Haplotypes and a Sex-Linked Marker. Genes (Basel) 2023; 14:1495. [PMID: 37510399 PMCID: PMC10379838 DOI: 10.3390/genes14071495] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Revised: 07/07/2023] [Accepted: 07/20/2023] [Indexed: 07/30/2023] Open
Abstract
The Noctuid moth soybean looper (SBL), Chrysodeixis includens (Walker), is an economically important pest of soybean (Glycine max (Linnaeus) Merrill). Because it is not known to survive freezing winters, permanent populations in the United States are believed to be limited to the southern regions of Texas and Florida, yet its geographical range of infestations annually extend to Canada. This indicates annual migrations of thousands of kilometers during the spring and summer growing season. This behavior is like that of the fall armyworm (FAW), Spodoptera frugiperda (J.E. Smith), also a Noctuid that is a major global pest of corn. SBL and FAW are projected to have very similar distributions of permanent populations in North America based on climate suitability modeling and the overlap in the distribution of their preferred host plants (corn and soybean). It therefore seems likely that the two species will display similar migratory behavior in the United States. This was tested by identifying genetic markers in SBL analogous to those successfully used to delineate FAW migratory pathways and comparing the distribution patterns of the markers from the two species. Contrary to expectations, the results indicate substantial differences in migratory behavior that appear to be related to differences in the timing of corn and soybean plantings. These findings underscore the importance of agricultural practices in influencing pest migration patterns, in particular the timing of host availability relative to mean seasonal air transport patterns.
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Affiliation(s)
- Rodney N Nagoshi
- Center for Medical, Agricultural and Veterinary Entomology, United States Department of Agriculture-Agricultural Research Service, Gainesville, FL 32608, USA
| | - Jeffrey A Davis
- Department of Entomology, LSU Agricultural Center, 404 Life Science Building, Baton Rouge, LA 70803, USA
| | - Robert L Meagher
- Center for Medical, Agricultural and Veterinary Entomology, United States Department of Agriculture-Agricultural Research Service, Gainesville, FL 32608, USA
| | - Fred R Musser
- Department of Biochemistry, Molecular Biology, Entomology, and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA
| | | | - Hector Portillo
- FMC Agricultural Solutions, Stine Research Center, Newark, DE 19711, USA
| | - Henry Teran
- Corteva Agriscience™, Carr #3 Km 156.5, Salinas, PR 00751, USA
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