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O'Donnell AE, Muirhead DK, Brasier AT, Capezzuoli E. Searching for Life in Hot Spring Carbonate Systems: Investigating Raman Spectra of Carotenoid-Bearing Organic Carbonaceous Inclusions from Travertines of Italy. ASTROBIOLOGY 2024; 24:163-176. [PMID: 37955648 DOI: 10.1089/ast.2023.0017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/14/2023]
Abstract
Carotenoid pigments provide some of the most common exclusively biogenic markers on Earth, and these organic pigments may be present in extraterrestrial life. Raman spectroscopy can be used to identify carotenoids quickly and accurately through the inelastic scattering of laser light. In this study, we show that Raman spectra of organic matter found in hot spring bacterial assemblages exhibit "spectral overprinting" of the carotenoid spectrum by the carbon spectrum as the organic matter progressively breaks down. Here, we present how, with increasing thermal maturity, the relative intensity of the carotenoid spectrum increases, and as maturity increases a low-intensity carbon spectrum forms in the same region as the carotenoid spectrum. This carbon spectrum increases in intensity as the thermal maturity increases further, progressively obscuring the carotenoid spectrum until only the carbon spectrum can be observed. This means key carotenoid biogenic signatures in hot spring deposits may be hidden within carbon spectra. A detailed study of the transition from carotenoid to carbon, Raman spectra may help develop deconvolution processes that assist in positively identifying biogenic carbon over abiogenic carbon. Our results are relevant for the data analysis from the Raman spectroscopy instruments on the Perseverance (National Aeronautics and Space Administration [NASA]) and Rosalind Franklin (European Space Agency [ESA]) rovers.
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Affiliation(s)
- Alexander E O'Donnell
- Department of Geology and Geophysics, School of Geosciences, University of Aberdeen, Aberdeen, United Kingdom
| | - David K Muirhead
- Department of Geology and Geophysics, School of Geosciences, University of Aberdeen, Aberdeen, United Kingdom
| | - Alexander T Brasier
- Department of Geology and Geophysics, School of Geosciences, University of Aberdeen, Aberdeen, United Kingdom
| | - Enrico Capezzuoli
- Department of Earth Sciences, University of Florence, Firenze, Italy
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Lorenz C, Bianchi E, Poggiali G, Alemanno G, Benesperi R, Brucato JR, Garland S, Helbert J, Loppi S, Lorek A, Maturilli A, Papini A, de Vera JP, Baqué M. Survivability of the lichen Xanthoria parietina in simulated Martian environmental conditions. Sci Rep 2023; 13:4893. [PMID: 36966209 PMCID: PMC10039903 DOI: 10.1038/s41598-023-32008-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Accepted: 03/21/2023] [Indexed: 03/27/2023] Open
Abstract
Xanthoria parietina (L.) Th. Fr. is a widely spread foliose lichen showing high tolerance against UV-radiation thanks to parietin, a secondary lichen substance. We exposed samples of X. parietina under simulated Martian conditions for 30 days to explore its survivability. The lichen's vitality was monitored via chlorophyll a fluorescence that gives an indication for active light reaction of photosynthesis, performing in situ and after-treatment analyses. Raman spectroscopy and TEM were used to evaluate carotenoid preservation and possible variations in the photobiont's ultrastructure respectively. Significant differences in the photo-efficiency between UV irradiated samples and dark-kept samples were observed. Fluorescence values correlated with temperature and humidity day-night cycles. The photo-efficiency recovery showed that UV irradiation caused significant effects on the photosynthetic light reaction. Raman spectroscopy showed that the carotenoid signal from UV exposed samples decreased significantly after the exposure. TEM observations confirmed that UV exposed samples were the most affected by the treatment, showing chloroplastidial disorganization in photobionts' cells. Overall, X. parietina was able to survive the simulated Mars conditions, and for this reason it may be considered as a candidate for space long-term space exposure and evaluations of the parietin photodegradability.
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Affiliation(s)
- Christian Lorenz
- Department of Biology, University of Florence, Via la Pira 4, 50121, Florence, Italy
| | - Elisabetta Bianchi
- Department of Biology, University of Florence, Via la Pira 4, 50121, Florence, Italy
| | - Giovanni Poggiali
- LESIA-Observatoire de Paris, CNRS, Université PSL, Sorbonne Université, Université de Paris, 5 Place Jules Janssen, 92190, Meudon, France
- INAF-Astrophysical Observatory of Arcetri, Largo E. Fermi 5, 50125, Florence, Italy
| | - Giulia Alemanno
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Renato Benesperi
- Department of Biology, University of Florence, Via la Pira 4, 50121, Florence, Italy
| | - John Robert Brucato
- INAF-Astrophysical Observatory of Arcetri, Largo E. Fermi 5, 50125, Florence, Italy.
| | - Stephen Garland
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Jörn Helbert
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Stefano Loppi
- Department of Environmental Sciences, University of Siena, Via P. A. Mattioli 4, 53100, Siena, Italy
| | - Andreas Lorek
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Alessandro Maturilli
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
| | - Alessio Papini
- Department of Biology, University of Florence, Via la Pira 4, 50121, Florence, Italy
| | - Jean-Pierre de Vera
- Microgravity User Support Center (MUSC), Space Operations and Astronaut Training, German Aerospace Center (DLR), Linder Höhe, 51147, Cologne, Germany
| | - Mickaël Baqué
- Planetary Laboratories Department, Institute of Planetary Research, German Aerospace Center (DLR), Ruthefordstraße 2, 12489, Berlin, Germany
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Wu JH, McGenity TJ, Rettberg P, Simões MF, Li WJ, Antunes A. The archaeal class Halobacteria and astrobiology: Knowledge gaps and research opportunities. Front Microbiol 2022; 13:1023625. [PMID: 36312929 PMCID: PMC9608585 DOI: 10.3389/fmicb.2022.1023625] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2022] [Accepted: 09/07/2022] [Indexed: 09/19/2023] Open
Abstract
Water bodies on Mars and the icy moons of the outer solar system are now recognized as likely being associated with high levels of salt. Therefore, the study of high salinity environments and their inhabitants has become increasingly relevant for Astrobiology. Members of the archaeal class Halobacteria are the most successful microbial group living in hypersaline conditions and are recognized as key model organisms for exposure experiments. Despite this, data for the class is uneven across taxa and widely dispersed across the literature, which has made it difficult to properly assess the potential for species of Halobacteria to survive under the polyextreme conditions found beyond Earth. Here we provide an overview of published data on astrobiology-linked exposure experiments performed with members of the Halobacteria, identifying clear knowledge gaps and research opportunities.
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Affiliation(s)
- Jia-Hui Wu
- State Key Laboratory of Lunar and Planetary Sciences, Macau University of Science and Technology (MUST), Taipa, Macau SAR, China
- China National Space Administration (CNSA), Macau Center for Space Exploration and Science, Taipa, Macau SAR, China
| | - Terry J. McGenity
- School of Life Sciences, University of Essex, Colchester, United Kingdom
| | - Petra Rettberg
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Köln, Germany
| | - Marta F. Simões
- State Key Laboratory of Lunar and Planetary Sciences, Macau University of Science and Technology (MUST), Taipa, Macau SAR, China
- China National Space Administration (CNSA), Macau Center for Space Exploration and Science, Taipa, Macau SAR, China
| | - Wen-Jun Li
- State Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Resources and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - André Antunes
- State Key Laboratory of Lunar and Planetary Sciences, Macau University of Science and Technology (MUST), Taipa, Macau SAR, China
- China National Space Administration (CNSA), Macau Center for Space Exploration and Science, Taipa, Macau SAR, China
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Baqué M, Backhaus T, Meeßen J, Hanke F, Böttger U, Ramkissoon N, Olsson-Francis K, Baumgärtner M, Billi D, Cassaro A, de la Torre Noetzel R, Demets R, Edwards H, Ehrenfreund P, Elsaesser A, Foing B, Foucher F, Huwe B, Joshi J, Kozyrovska N, Lasch P, Lee N, Leuko S, Onofri S, Ott S, Pacelli C, Rabbow E, Rothschild L, Schulze-Makuch D, Selbmann L, Serrano P, Szewzyk U, Verseux C, Wagner D, Westall F, Zucconi L, de Vera JPP. Biosignature stability in space enables their use for life detection on Mars. SCIENCE ADVANCES 2022; 8:eabn7412. [PMID: 36070383 PMCID: PMC9451166 DOI: 10.1126/sciadv.abn7412] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Accepted: 07/20/2022] [Indexed: 06/14/2023]
Abstract
Two rover missions to Mars aim to detect biomolecules as a sign of extinct or extant life with, among other instruments, Raman spectrometers. However, there are many unknowns about the stability of Raman-detectable biomolecules in the martian environment, clouding the interpretation of the results. To quantify Raman-detectable biomolecule stability, we exposed seven biomolecules for 469 days to a simulated martian environment outside the International Space Station. Ultraviolet radiation (UVR) strongly changed the Raman spectra signals, but only minor change was observed when samples were shielded from UVR. These findings provide support for Mars mission operations searching for biosignatures in the subsurface. This experiment demonstrates the detectability of biomolecules by Raman spectroscopy in Mars regolith analogs after space exposure and lays the groundwork for a consolidated space-proven database of spectroscopy biosignatures in targeted environments.
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Affiliation(s)
- Mickael Baqué
- German Aerospace Center (DLR), Institute of Planetary Research, Planetary Laboratories Department, Rutherfordstr. 2, 12489 Berlin, Germany
| | - Theresa Backhaus
- Heinrich-Heine-Universität (HHU), Institut für Botanik, Universitätsstr. 1, 40225 Düsseldorf, Germany
| | - Joachim Meeßen
- Heinrich-Heine-Universität (HHU), Institut für Botanik, Universitätsstr. 1, 40225 Düsseldorf, Germany
| | - Franziska Hanke
- German Aerospace Center (DLR), Institute of Optical Sensor Systems, Rutherfordstr. 2, 12489 Berlin, Germany
| | - Ute Böttger
- German Aerospace Center (DLR), Institute of Optical Sensor Systems, Rutherfordstr. 2, 12489 Berlin, Germany
| | - Nisha Ramkissoon
- AstrobiologyOU, Faculty of Science, Technology, Engineering and Mathematics, The Open University, Milton Keynes, MK7 6AA, UK
| | - Karen Olsson-Francis
- AstrobiologyOU, Faculty of Science, Technology, Engineering and Mathematics, The Open University, Milton Keynes, MK7 6AA, UK
| | - Michael Baumgärtner
- Microbial Geoecology and Astrobiology, Department of Ecology and Environmental Sciences, Umeå university, Linnaeus väg 6, 901 87 Umeå, Sweden
| | - Daniela Billi
- Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, 00133, Rome, Italy
| | - Alessia Cassaro
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Largo dell’Università snc, 01100 Viterbo, Italy
| | - Rosa de la Torre Noetzel
- Departamento de Observación de la Tierra, Instituto Nacional de Técnica Aeroespacial (INTA), Torrejón de Ardoz-28850, Madrid, Spain
| | - René Demets
- European Space Agency (ESA), European Space Research and Technology Centre (ESTEC),, Noordwijk, Netherlands
| | - Howell Edwards
- University of Bradford, University Analytical Centre, Division of Chemical and Forensic Sciences, Raman Spectroscopy Group, West Yorkshire, UK
| | - Pascale Ehrenfreund
- Leiden Observatory, Laboratory Astrophysics, Leiden University, Leiden, Netherlands
- George Washington University, Space Policy Institute, Washington, DC 20052, USA
| | - Andreas Elsaesser
- Freie Universitaet Berlin, Experimental Biophysics and Space Sciences, Institute of Experimental Physics; Arnimallee 14, 14195 Berlin, Germany
| | - Bernard Foing
- Leiden Observatory, Laboratory Astrophysics, Leiden University, Leiden, Netherlands
- Faculty of Earth and Life Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1081-1087, 1081 HV, Amsterdam, Netherlands
| | - Frédéric Foucher
- CNRS Centre de Biophysique Moléculaire, UPR-4301, Rue Charles Sadron, CS80054, 45071 Orléans Cedex 2, France
| | - Björn Huwe
- Biodiversity Research/Systematic Botany, University of Potsdam, Maulbeerallee 1, D-14469 Potsdam, Germany
- Department Technology Assessment and Substance Cycles, Leibniz- Institute for Agriculture Engineering and Bioeconomy, Max-Eyth-Allee 100, D-14469 Potsdam, Germany
| | - Jasmin Joshi
- Institute for Landscape and Open Space, Eastern Switzerland University of Applied Sciences, Seestrasse 10, 8640 Rapperswil, Switzerland
| | - Natalia Kozyrovska
- Institute of Molecular Biology and Genetics of NASU, Acad. Zabolotnoho str.150, 03680, Kyiv Ukraine
| | - Peter Lasch
- Centre for Biological Threats and Special Pathogens (ZBS 6), Robert Koch Institute, Nordufer 20, 13353 Berlin, Germany
| | - Natuschka Lee
- Microbial Geoecology and Astrobiology, Department of Ecology and Environmental Sciences, Umeå university, Linnaeus väg 6, 901 87 Umeå, Sweden
| | - Stefan Leuko
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Linder Höhe, 51147 Köln, Germany
| | - Silvano Onofri
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Largo dell’Università snc, 01100 Viterbo, Italy
| | - Sieglinde Ott
- Heinrich-Heine-Universität (HHU), Institut für Botanik, Universitätsstr. 1, 40225 Düsseldorf, Germany
| | - Claudia Pacelli
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Largo dell’Università snc, 01100 Viterbo, Italy
- Research and Science Department, Italian Space Agency (ASI), Via del Politecnico snc, 00133, Rome, Italy
| | - Elke Rabbow
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Linder Höhe, 51147 Köln, Germany
| | - Lynn Rothschild
- NASA Ames Research Center, Mail Stop 239-20, P.O. Box 1, Moffett Field, CA 94035-0001, USA
- Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, 185 Meeting Street, Providence, RI 02912, USA
| | - Dirk Schulze-Makuch
- Technical University Berlin, ZAA, Hardenbergstr. 36, D-10623 Berlin, Germany
- Section Geomicrobiology, German Research Centre for Geosciences (GFZ), Telegrafenberg, 14473 Potsdam, Germany
- Department of Experimental Limnology, Leibniz-Institute of Freshwater Ecology and Inland Fisheries (IGB), 12587, Stechlin, Germany
| | - Laura Selbmann
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Largo dell’Università snc, 01100 Viterbo, Italy
- Mycological Section, Italian Antarctic National Museum (MNA), 16121 Genoa, Italy
| | - Paloma Serrano
- Section Geomicrobiology, German Research Centre for Geosciences (GFZ), Telegrafenberg, 14473 Potsdam, Germany
- Helmholtz Centre for Polar and Marine Research, Alfred Wegener Institute (AWI), Telegrafenberg, 14473 Potsdam, Germany
| | - Ulrich Szewzyk
- Institute of Environmental Technology, Environmental Microbiology, Technical University Berlin, Ernst-Reuter-Platz 1, Berlin, 10587 Berlin, Germany
| | - Cyprien Verseux
- Center of Applied Space Technology and Microgravity (ZARM), University of Bremen, Am Fallturm 2, 28359, Bremen, Germany
| | - Dirk Wagner
- Section Geomicrobiology, German Research Centre for Geosciences (GFZ), Telegrafenberg, 14473 Potsdam, Germany
- Institute of Geosciences, University of Potsdam, Karl-Liebknecht-Str. 24, 14476, Potsdam, Germany
| | - Frances Westall
- CNRS Centre de Biophysique Moléculaire, UPR-4301, Rue Charles Sadron, CS80054, 45071 Orléans Cedex 2, France
| | - Laura Zucconi
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, Largo dell’Università snc, 01100 Viterbo, Italy
| | - Jean-Pierre P. de Vera
- German Aerospace Center (DLR), Microgravity User Support Center (MUSC), Linder Höhe, 51147 Köln, Germany
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Fernández-Remolar DC, Carrizo D, Harir M, Huang T, Amils R, Schmitt-Kopplin P, Sánchez-García L, Gomez-Ortiz D, Malmberg P. Unveiling microbial preservation under hyperacidic and oxidizing conditions in the Oligocene Rio Tinto deposit. Sci Rep 2021; 11:21543. [PMID: 34728655 PMCID: PMC8563943 DOI: 10.1038/s41598-021-00730-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Accepted: 10/11/2021] [Indexed: 11/22/2022] Open
Abstract
The preservation of biosignatures on Mars is largely associated with extensive deposits of clays formed under mild early Noachian conditions (> 3.9 Ga). They were followed by widespread precipitation of acidic sulfates considered adverse for biomolecule preservation. In this paper, an exhaustive mass spectrometry investigation of ferric subsurface materials in the Rio Tinto gossan deposit (~ 25 Ma) provides evidence of well-preserved molecular biosignatures under oxidative and acidic conditions. Time of flight secondary ion mass spectrometry (ToF–SIMS) analysis shows a direct association between physical-templating biological structures and molecular biosignatures. This relation implies that the quality of molecular preservation is exceptional and provides information on microbial life formerly operating in the shallow regions of the Rio Tinto subsurface. Consequently, low-pH oxidative environments on Mars could also record molecular information about ancient life in the same way as the Noachian clay-rich deposits.
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Affiliation(s)
- David C Fernández-Remolar
- CEA, CNRS, IBS, Metalloproteins Unit, Université Grenoble Alpes, 38000, Grenoble, France. .,State Key Laboratory of Lunar and Planetary Sciences, Macau University of Science and Technology, Macau, 999078, PR China. .,CNSA Macau Center for Space Exploration and Science, Macau, 999078, PR China.
| | | | - Mourad Harir
- Research Unit Analytical Biogeochemistry, Helmholtz Zentrum München, Neuherberg, Germany
| | - Ting Huang
- State Key Laboratory of Lunar and Planetary Sciences, Macau University of Science and Technology, Macau, China
| | - Ricardo Amils
- Centro de Astrobiología (INTA-CSIC), Madrid, Spain.,Centro de Biología Molecular Severo Ochoa, Universidad Autónoma de Madrid, Madrid, Spain
| | - Philippe Schmitt-Kopplin
- Research Unit Analytical Biogeochemistry, Helmholtz Zentrum München, Neuherberg, Germany.,Chair of Analytical Food Chemistry, Technical University Munich, 85354, Freising-Weihenstephan, Germany
| | | | - David Gomez-Ortiz
- ESCET-Área de Geología, Universidad Rey Juan Carlos, 28933, Móstoles, Madrid, Spain
| | - Per Malmberg
- Chemistry and Chemical Engineering, Chalmers University of Technology, Kemivägen 10, 412 96, Gothenburg, Sweden
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Ott E, Kawaguchi Y, Kölbl D, Rabbow E, Rettberg P, Mora M, Moissl-Eichinger C, Weckwerth W, Yamagishi A, Milojevic T. Molecular repertoire of Deinococcus radiodurans after 1 year of exposure outside the International Space Station within the Tanpopo mission. MICROBIOME 2020; 8:150. [PMID: 33121542 PMCID: PMC7597052 DOI: 10.1186/s40168-020-00927-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Accepted: 09/24/2020] [Indexed: 05/10/2023]
Abstract
BACKGROUND The extraordinarily resistant bacterium Deinococcus radiodurans withstands harsh environmental conditions present in outer space. Deinococcus radiodurans was exposed for 1 year outside the International Space Station within Tanpopo orbital mission to investigate microbial survival and space travel. In addition, a ground-based simulation experiment with conditions, mirroring those from low Earth orbit, was performed. METHODS We monitored Deinococcus radiodurans cells during early stage of recovery after low Earth orbit exposure using electron microscopy tools. Furthermore, proteomic, transcriptomic and metabolomic analyses were performed to identify molecular mechanisms responsible for the survival of Deinococcus radiodurans in low Earth orbit. RESULTS D. radiodurans cells exposed to low Earth orbit conditions do not exhibit any morphological damage. However, an accumulation of numerous outer-membrane-associated vesicles was observed. On levels of proteins and transcripts, a multi-faceted response was detected to alleviate cell stress. The UvrABC endonuclease excision repair mechanism was triggered to cope with DNA damage. Defense against reactive oxygen species is mirrored by the increased abundance of catalases and is accompanied by the increased abundance of putrescine, which works as reactive oxygen species scavenging molecule. In addition, several proteins and mRNAs, responsible for regulatory and transporting functions showed increased abundances. The decrease in primary metabolites indicates alternations in the energy status, which is needed to repair damaged molecules. CONCLUSION Low Earth orbit induced molecular rearrangements trigger multiple components of metabolic stress response and regulatory networks in exposed microbial cells. Presented results show that the non-sporulating bacterium Deinococcus radiodurans survived long-term low Earth orbit exposure if wavelength below 200 nm are not present, which mirrors the UV spectrum of Mars, where CO2 effectively provides a shield below 190 nm. These results should be considered in the context of planetary protection concerns and the development of new sterilization techniques for future space missions. Video Abstract.
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Affiliation(s)
- Emanuel Ott
- Space Biochemistry Group, Department of Biophysical Chemistry, University of Vienna, Vienna, Austria
| | - Yuko Kawaguchi
- Planetary Exploration Research Center (PERC), Chiba Institute of Technology (CIT), Chiba, Japan
| | - Denise Kölbl
- Space Biochemistry Group, Department of Biophysical Chemistry, University of Vienna, Vienna, Austria
| | - Elke Rabbow
- Institute of Aerospace Medicine, Radiation Biology Department, German Aerospace Center, Cologne, Germany
| | - Petra Rettberg
- Institute of Aerospace Medicine, Radiation Biology Department, German Aerospace Center, Cologne, Germany
| | - Maximilian Mora
- Department of Internal Medicine, Section of Infectious Diseases and Tropical Medicine, Medical University Graz, Graz, Austria
| | - Christine Moissl-Eichinger
- Department of Internal Medicine, Section of Infectious Diseases and Tropical Medicine, Medical University Graz, Graz, Austria
| | - Wolfram Weckwerth
- Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria
- Vienna Metabolomics Center (VIME), University of Vienna, Vienna, Austria
| | - Akihiko Yamagishi
- Department of Life Science, Tokyo Institute of Technology, Nagatsuta, Yokohama, Japan
| | - Tetyana Milojevic
- Space Biochemistry Group, Department of Biophysical Chemistry, University of Vienna, Vienna, Austria.
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Taubner RS, Olsson-Francis K, Vance SD, Ramkissoon NK, Postberg F, de Vera JP, Antunes A, Camprubi Casas E, Sekine Y, Noack L, Barge L, Goodman J, Jebbar M, Journaux B, Karatekin Ö, Klenner F, Rabbow E, Rettberg P, Rückriemen-Bez T, Saur J, Shibuya T, Soderlund KM. Experimental and Simulation Efforts in the Astrobiological Exploration of Exooceans. SPACE SCIENCE REVIEWS 2020; 216:9. [PMID: 32025060 PMCID: PMC6977147 DOI: 10.1007/s11214-020-0635-5] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2019] [Accepted: 01/06/2020] [Indexed: 05/05/2023]
Abstract
The icy satellites of Jupiter and Saturn are perhaps the most promising places in the Solar System regarding habitability. However, the potential habitable environments are hidden underneath km-thick ice shells. The discovery of Enceladus' plume by the Cassini mission has provided vital clues in our understanding of the processes occurring within the interior of exooceans. To interpret these data and to help configure instruments for future missions, controlled laboratory experiments and simulations are needed. This review aims to bring together studies and experimental designs from various scientific fields currently investigating the icy moons, including planetary sciences, chemistry, (micro-)biology, geology, glaciology, etc. This chapter provides an overview of successful in situ, in silico, and in vitro experiments, which explore different regions of interest on icy moons, i.e. a potential plume, surface, icy shell, water and brines, hydrothermal vents, and the rocky core.
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Affiliation(s)
- Ruth-Sophie Taubner
- Archaea Biology and Ecogenomics Division, University of Vienna, Vienna, Austria
| | | | | | | | | | | | - André Antunes
- State Key Laboratory of Lunar and Planetary Sciences, Macau University of Science and Technology, Macau SAR, China
| | | | | | - Lena Noack
- Freie Universität Berlin, Berlin, Germany
| | | | | | | | | | | | | | - Elke Rabbow
- German Aerospace Center (DLR), Cologne, Germany
| | | | | | | | - Takazo Shibuya
- Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan
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Choi JY, Lee K, Lee PC. Characterization of Carotenoid Biosynthesis in Newly Isolated Deinococcus sp. AJ005 and Investigation of the Effects of Environmental Conditions on Cell Growth and Carotenoid Biosynthesis. Mar Drugs 2019; 17:md17120705. [PMID: 31847382 PMCID: PMC6950390 DOI: 10.3390/md17120705] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2019] [Revised: 12/08/2019] [Accepted: 12/11/2019] [Indexed: 12/30/2022] Open
Abstract
Our purpose was to characterize the structures of deinoxanthin from Deinococcus sp. AJ005. The latter is a novel reddish strain and was found to synthesize two main acyclic carotenoids: deinoxanthin and its derivative. The derivative (2-keto-deinoxanthin) contains a 2-keto functional group instead of a 2-hydroxyl group on a β-ionone ring. A deinoxanthin biosynthesis pathway of Deinococcus sp. AJ005 involving eight putative enzymes was proposed according to genome annotation analysis and chemical identification of deinoxanthin. Optimal culture pH and temperature for Deinococcus sp. AJ005 growth were pH 7.4 and 20 °C. Sucrose as a carbon source significantly enhanced the cell growth in comparison with glucose, glycerol, maltose, lactose, and galactose. When batch fermentation was performed in a bioreactor containing 40g/L sucrose, total carotenoid production was 650% higher than that in a medium without sucrose supplementation. The culture conditions found in this study should provide the basis for the development of fermentation strategies for the production of deinoxanthin and of its derivative by means of Deinococcus sp. AJ005.
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