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Chakraborty S, Paidi MK, Dhinakarasamy I, Sivakumar M, Clements C, Thirumurugan NK, Sivakumar L. Adaptive mechanism of the marine bacterium Pseudomonas sihuiensis-BFB-6S towards pCO 2 variation: Insights into synthesis of extracellular polymeric substances and physiochemical modulation. Int J Biol Macromol 2024; 261:129860. [PMID: 38309406 DOI: 10.1016/j.ijbiomac.2024.129860] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Revised: 01/11/2024] [Accepted: 01/29/2024] [Indexed: 02/05/2024]
Abstract
Marine bacteria can adapt to various extreme environments by the production of extracellular polymeric substances (EPS). Throughout this investigation, impact of variable pCO2 levels on the metabolic activity and physiochemical modulation in EPS matrix of marine bacterium Pseudomonas sihuiensis - BFB-6S was evaluated using a fluorescence microscope, excitation-emission matrix (EEM), 2D-Fourier transform infrared correlation spectroscopy (2D-ATR-FTIR-COS), FT-NMR and TGA-DSC. From the results at higher pCO2 levels, there was a substantial reduction in EPS production by 58-62.8 % (DW). In addition to the biochemical composition of EPS, reduction in carbohydrates (8.7-47.6 %), protein (7.1-91.5 %), and lipids (16.9-68.6 %) content were observed at higher pCO2 levels. Functional discrepancies of fluorophores (tyrosine and tryptophan-like) in EPS, speckled differently in response to variable pCO2. The 2D-ATR-FTIR-COS analysis revealed functional amides (CN, CC, CO bending, -NH bending in amines) of EPS were preferentially altered, which led to the domination of polysaccharides relevant functional groups at higher pCO2. 1H NMR analysis of EPS confirmed the absence of chemical signals from H-C-COOH of proteins, α, β anomeric protons, and acetyl group relevant region at higher pCO2 levels. These findings can contribute new insights into the influence of pCO2 on the adaptation of marine microbes in future ocean acidification scenarios.
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Affiliation(s)
- Subham Chakraborty
- Centre for Ocean Research (DST-FIST Sponsored Centre), MoES-Earth Science & Technology Cell, Sathyabama Institute of Science and Technology, Chennai 600119, Tamil Nadu, India
| | - Murali Krishna Paidi
- CSIR-Central Salt and Marine Chemicals Research Institute, G. B. Marg, Bhavnagar 364002, Gujarat, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Inbakandan Dhinakarasamy
- Centre for Ocean Research (DST-FIST Sponsored Centre), MoES-Earth Science & Technology Cell, Sathyabama Institute of Science and Technology, Chennai 600119, Tamil Nadu, India.
| | - Manikandan Sivakumar
- Centre for Ocean Research (DST-FIST Sponsored Centre), MoES-Earth Science & Technology Cell, Sathyabama Institute of Science and Technology, Chennai 600119, Tamil Nadu, India
| | - Clarita Clements
- Centre for Ocean Research (DST-FIST Sponsored Centre), MoES-Earth Science & Technology Cell, Sathyabama Institute of Science and Technology, Chennai 600119, Tamil Nadu, India
| | - Naren Kumar Thirumurugan
- Centre for Ocean Research (DST-FIST Sponsored Centre), MoES-Earth Science & Technology Cell, Sathyabama Institute of Science and Technology, Chennai 600119, Tamil Nadu, India
| | - Lakshminarayanan Sivakumar
- Centre for Ocean Research (DST-FIST Sponsored Centre), MoES-Earth Science & Technology Cell, Sathyabama Institute of Science and Technology, Chennai 600119, Tamil Nadu, India
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Daly G, Decorosi F, Viti C, Adessi A. Shaping the phycosphere: Analysis of the EPS in diatom-bacterial co-cultures. JOURNAL OF PHYCOLOGY 2023; 59:791-797. [PMID: 37399119 DOI: 10.1111/jpy.13361] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2022] [Revised: 05/31/2023] [Accepted: 06/05/2023] [Indexed: 07/05/2023]
Abstract
The phycosphere is a unique niche that fosters complex interactions between microalgae and associated bacteria. The formation of this extracellular environment, and the associated bacterial biodiversity, is heavily influenced by the secretion of extracellular polymers, primarily driven by phototrophic organisms. The exopolysaccharides (EPS) represent the largest fraction of the microalgae-derived exudates, which can be specifically used by heterotrophic bacteria as substrates for metabolic processes. Furthermore, it has been proposed that bacteria and their extracellular factors play a role in both the release and composition of the EPS. In this study, two model microorganisms, the diatom Phaeodactylum tricornutum CCAP 1055/15 and the bacterium Pseudoalteromonas haloplanktis TAC125, were co-cultured in a dual system to assess how their interactions modify the phycosphere chemical composition by analyzing the EPS monosaccharide profile released in the culture media by the two partners. We demonstrate that microalgal-bacterial interactions in this simplified model significantly influenced the architecture of their extracellular environment. We observed that the composition of the exo-environment, as described by the EPS monosaccharide profiles, varied under different culture conditions and times of incubation. This study reports an initial characterization of the molecular modifications occurring in the extracellular environment surrounding two relevant representatives of marine systems.
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Affiliation(s)
- Giulia Daly
- Department of Agriculture, Food, Environment and Forestry (DAGRI), University of Florence, Florence, Italy
| | - Francesca Decorosi
- Department of Agriculture, Food, Environment and Forestry (DAGRI), University of Florence, Florence, Italy
| | - Carlo Viti
- Department of Agriculture, Food, Environment and Forestry (DAGRI), University of Florence, Florence, Italy
- NBFC, National Biodiversity Future Center, Palermo, Italy
| | - Alessandra Adessi
- Department of Agriculture, Food, Environment and Forestry (DAGRI), University of Florence, Florence, Italy
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Wang H, Zhao Y, Yin S, Dai Y, Zhao J, Wang Z, Xing B. Antagonism toxicity of CuO nanoparticles and mild ocean acidification to marine algae. JOURNAL OF HAZARDOUS MATERIALS 2023; 448:130857. [PMID: 36709738 DOI: 10.1016/j.jhazmat.2023.130857] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Revised: 01/14/2023] [Accepted: 01/22/2023] [Indexed: 06/18/2023]
Abstract
The toxicity of CuO nanoparticles (NPs) to marine microalgae (Emiliania huxleyi) under ocean acidification (OA) conditions (pHs 8.10, 7.90, 7.50) was investigated. CuO NPs (5.0 mg/L) caused significant toxicity (e.g., 48-h growth inhibition, 20%) under normal pH (8.10), and severe OA (pH 7.50) increased the toxicity of CuO NPs (e.g., 48-h growth inhibition, 68%). However, toxicity antagonism was observed with a growth inhibition (48 h) decreased to 37% after co-exposure to CuO NPs and mild OA (pH 7.90), which was attributed to the released Cu2+ ions from CuO NPs. Based on biological responses as obtained from RNA-sequencing, the dissolved Cu2+ ions (0.078 mg/L) under mild OA were found to increase algae division (by 17%) and photosynthesis (by 28%) through accelerating photosynthetic electron transport and promoting ATP synthesis. In addition, mild OA enhanced EPS secretion by 41% and further increased bioavailable Cu2+ ions, thus mitigating OA-induced toxicity. In addition, excess Cu2+ ions could be transformed into less toxic Cu2S and Cu2O based on X-ray absorption near-edge spectroscopy (XANES) and high-resolution transmission electron microscopy (HR-TEM), which could additionally regulate the antagonism effect of CuO NPs and mild OA. The information advances our knowledge in nanotoxicity to marine organisms under global climate change.
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Affiliation(s)
- Hao Wang
- Institute of Coastal Environmental Pollution Control, Key Laboratory of Marine Environment and Ecology (Ministry of Education), Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao 266100, PR China
| | - Yating Zhao
- Institute of Coastal Environmental Pollution Control, Key Laboratory of Marine Environment and Ecology (Ministry of Education), Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao 266100, PR China
| | - Shuang Yin
- Institute of Coastal Environmental Pollution Control, Key Laboratory of Marine Environment and Ecology (Ministry of Education), Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao 266100, PR China
| | - Yanhui Dai
- Institute of Coastal Environmental Pollution Control, Key Laboratory of Marine Environment and Ecology (Ministry of Education), Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao 266100, PR China
| | - Jian Zhao
- Institute of Coastal Environmental Pollution Control, Key Laboratory of Marine Environment and Ecology (Ministry of Education), Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao 266100, PR China; Laboratory for Marine Ecology and Environmental Science, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266237, PR China.
| | - Zhenyu Wang
- Institute of Environmental Processes and Pollution Control, and School of Environmental and Civil Engineering, Jiangnan University, Wuxi 214122, PR China.
| | - Baoshan Xing
- Stockbridge School of Agriculture, University of Massachusetts, Amherst, MA 01003, USA
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Isolation and identification of allelochemicals produced by Phaeodactylum tricornutum for Prorocentrum donghaiense. ALGAL RES 2022. [DOI: 10.1016/j.algal.2022.102808] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Sethi D, Butler TO, Shuhaili F, Vaidyanathan S. Diatoms for Carbon Sequestration and Bio-Based Manufacturing. BIOLOGY 2020; 9:E217. [PMID: 32785088 PMCID: PMC7464044 DOI: 10.3390/biology9080217] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Revised: 08/03/2020] [Accepted: 08/05/2020] [Indexed: 12/12/2022]
Abstract
Carbon dioxide (CO2) is a major greenhouse gas responsible for climate change. Diatoms, a natural sink of atmospheric CO2, can be cultivated industrially in autotrophic and mixotrophic modes for the purpose of CO2 sequestration. In addition, the metabolic diversity exhibited by this group of photosynthetic organisms provides avenues to redirect the captured carbon into products of value. These include lipids, omega-3 fatty acids, pigments, antioxidants, exopolysaccharides, sulphated polysaccharides, and other valuable metabolites that can be produced in environmentally sustainable bio-manufacturing processes. To realize the potential of diatoms, expansion of our knowledge of carbon supply, CO2 uptake and fixation by these organisms, in conjunction with ways to enhance metabolic routing of the fixed carbon to products of value is required. In this review, current knowledge is explored, with an evaluation of the potential of diatoms for carbon capture and bio-based manufacturing.
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Affiliation(s)
- Deepak Sethi
- Department of Chemical and Biological Engineering, The University of Sheffield, Sheffield S1 3JD, UK; (F.S.); (S.V.)
| | - Thomas O. Butler
- Department of Chemical and Biological Engineering, The University of Sheffield, Sheffield S1 3JD, UK; (F.S.); (S.V.)
| | - Faqih Shuhaili
- Department of Chemical and Biological Engineering, The University of Sheffield, Sheffield S1 3JD, UK; (F.S.); (S.V.)
- School of Bioprocess Engineering, Universiti Malaysia Perlis (UniMAP), Arau 02600, Perlis, Malaysia
| | - Seetharaman Vaidyanathan
- Department of Chemical and Biological Engineering, The University of Sheffield, Sheffield S1 3JD, UK; (F.S.); (S.V.)
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