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Tao L, Chiarelli MP, Pavlova S, Kolokythas A, Schwartz J, DeFrancesco J, Salameh B, Green SJ, Adami G. Enrichment of polycyclic aromatic hydrocarbon metabolizing microorganisms on the oral mucosa of tobacco users. PeerJ 2024; 12:e16626. [PMID: 38188172 PMCID: PMC10771095 DOI: 10.7717/peerj.16626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 11/16/2023] [Indexed: 01/09/2024] Open
Abstract
Certain soil microbes resist and metabolize polycyclic aromatic hydrocarbons (PAHs). The same is true for a subset of skin microbes. In the human mouth, oral microbes have the potential to oxidize tobacco PAHs, thereby increasing these chemicals' ability to cause cancer of adjacent epithelium. We hypothesized that we could identify, in smokers, the oral mucosal microbes that can metabolize PAH. We isolated bacteria and fungi that survived long-term in minimal media with PAHs as the sole carbon source, under aerobic conditions, from the oral mucosa in 17 of 26 smokers and two of 14 nonsmokers. Of bacteria genera that survived harsh PAH exposure in vitro, most were found at trace levels, except for Staphylococcus, Actinomyces, and Kingella, which were more abundant. Two PAH-resistant strains of Candida albicans (C. albicans) were isolated from smokers. C. albicans was a prime candidate to contribute to carcinogenesis in tobacco users as it is found orally at high levels in tobacco users on the mucosa, and some Candida species can metabolize PAHs. However, when C. albicans isolates were tested for metabolism of two model PAH substrates, pyrene and phenanthrene, they were not capable, suggesting they cannot metabolize PAH under the conditions used. In conclusion, evidence for large scale microbial degradation of tobacco PAHs under aerobic conditions on the oral mucosa remains lacking, though nonabundant PAH metabolizers are certainly present.
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Affiliation(s)
- Lin Tao
- Department of Oral Biology, College of Dentistry, University of Illinois Chicago, Chicago, IL, United States of America
| | - M Paul Chiarelli
- Department of Chemistry and Biochemistry, Loyola University of Chicago, Chicago, IL, United States of America
| | - Sylvia Pavlova
- Department of Oral Biology, College of Dentistry, University of Illinois Chicago, Chicago, IL, United States of America
| | - Antonia Kolokythas
- Department of Oral and Maxillofacial Surgery, Eastman Institute for Oral Health, University of Rochester, Rochester, NY, United States of America
| | - Joel Schwartz
- Oral Medicine and Diagnostic Sciences, University of Illinois Chicago, Chicago, IL, United States of America
| | - James DeFrancesco
- Forensic Science Program — Department of Criminal Justice, Loyola University of Chicago, Chicago, IL, United States of America
| | - Benjamin Salameh
- Oral Medicine and Diagnostic Sciences, University of Illinois Chicago, Chicago, IL, United States of America
| | - Stefan J. Green
- DNA Sequencing Core, Research Resources Center, University of Illinois Chicago, Chicago, IL, United States of America
| | - Guy Adami
- Oral Medicine and Diagnostic Sciences, University of Illinois Chicago, Chicago, IL, United States of America
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Fahmi AM, Summers S, Jones M, Bowler B, Hennige S, Gutierrez T. Effect of ocean acidification on the growth, response and hydrocarbon degradation of coccolithophore-bacterial communities exposed to crude oil. Sci Rep 2023; 13:5013. [PMID: 36973465 PMCID: PMC10042988 DOI: 10.1038/s41598-023-31784-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Accepted: 03/17/2023] [Indexed: 03/29/2023] Open
Abstract
Hydrocarbon-degrading bacteria, which can be found living with eukaryotic phytoplankton, play a pivotal role in the fate of oil spillage to the marine environment. Considering the susceptibility of calcium carbonate-bearing phytoplankton under future ocean acidification conditions and their oil-degrading communities to oil exposure under such conditions, we investigated the response of non-axenic E. huxleyi to crude oil under ambient versus elevated CO2 concentrations. Under elevated CO2 conditions, exposure to crude oil resulted in the immediate decline of E. huxleyi, with concomitant shifts in the relative abundance of Alphaproteobacteria and Gammaproteobacteria. Survival of E. huxleyi under ambient conditions following oil enrichment was likely facilitated by enrichment of oil-degraders Methylobacterium and Sphingomonas, while the increase in relative abundance of Marinobacter and unclassified Gammaproteobacteria may have increased competitive pressure with E. huxleyi for micronutrient acquisition. Biodegradation of the oil was not affected by elevated CO2 despite a shift in relative abundance of known and putative hydrocarbon degraders. While ocean acidification does not appear to affect microbial degradation of crude oil, elevated mortality responses of E. huxleyi and shifts in the bacterial community illustrates the complexity of microalgal-bacterial interactions and highlights the need to factor these into future ecosystem recovery projections.
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Affiliation(s)
- Afiq Mohd Fahmi
- School of Engineering and Physical Science, Heriot-Watt University, Edinburgh, EH14 4AS, UK
- Fakulti Sains dan Sekitaran Marin, Universiti Malaysia Terengganu, 21030, Kuala, Terengganu, Malaysia
| | - Stephen Summers
- School of Engineering and Physical Science, Heriot-Watt University, Edinburgh, EH14 4AS, UK
- The Singapore Centre for Environmental Life Sciences Engineering and the School of Biological Sciences, Nanyang Technological University, Singapore, 637551, Singapore
| | - Martin Jones
- School of Civil Engineering and Geosciences, Newcastle University, Newcastle Upon Tyne, NE17RU, UK
| | - Bernard Bowler
- School of Civil Engineering and Geosciences, Newcastle University, Newcastle Upon Tyne, NE17RU, UK
| | - Sebastian Hennige
- School of Geosciences, University of Edinburgh, Edinburgh, EH9 3JW, UK.
| | - Tony Gutierrez
- School of Engineering and Physical Science, Heriot-Watt University, Edinburgh, EH14 4AS, UK.
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Cao P, Zhang Y, Dong G, Wu H, Yang Y, Liu Y. Clinical Oral Condition Analysis and the Influence of Highly Active Antiretroviral Therapy on Human Salivary Microbial Community Diversity in HIV-Infected/AIDS Patients. Front Cell Infect Microbiol 2022; 12:937039. [PMID: 35846778 PMCID: PMC9277119 DOI: 10.3389/fcimb.2022.937039] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Accepted: 06/01/2022] [Indexed: 11/13/2022] Open
Abstract
The purpose of this study was to assess the clinical oral status and investigate the effect of highly active antiretroviral therapy (HAART) on oral flora diversity in human immunodeficiency virus (HIV)-infected/acquired immune deficiency syndrome (AIDS) patients. We first recorded and analyzed the demographic indicators of 108 HIV-infected patients and assessed their periodontal health, dental health and oral lesion status by oral examination. Besides, we compared the changes in salivary microbial communities of healthy controls, before and after treatment of HAART-processed AIDS patients by Roche 454 sequencing and RT-qPCR. In HIV-infected/AIDS patients, age, sex, marital status, income level, smoking and oral health behaviors had an effect on periodontal clinical indicators; age and marital status were correlated with dental clinical indicators; most of them were accompanied by oral manifestations, mainly including candidiasis albicans, salivary gland disease, AIDS-associated periodontitis, and oral ulcers. Besides, a total of 487 species were detected in the saliva of AIDS patients. The microbial communities of HAART-unprocessed AIDS patients significantly differed from those processed patients, with 112 unique microbial species. More importantly, a large number of conditioned pathogens were also detected in the saliva samples of AIDS patients, which may be associated with opportunistic infections. Therefore, HAART might have a crucial role in salivary microecological balance in AIDS patients. And these patients should pay attention to the maintenance of oral health, and the early initiation of HAART may be important for the development of oral lesions.
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Affiliation(s)
- Peilin Cao
- Department of Stomatology, Sichuan Provincial People’s Hospital, University of Electronic Science and Technology of China, Chengdu, China
| | - Yifan Zhang
- State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, China
- Department of Stomatology, Hangzhou Dental Hospital Group, Hangzhou, China
- Division of Advanced Prosthetic Dentistry, Tohoku University Graduate School of Dentistry, Sendai, Japan
| | - Guangyan Dong
- State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, China
| | - Hongkun Wu
- State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, China
| | - Yuxiang Yang
- Department of Radiology, West China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, China
- *Correspondence: Yuxiang Yang, ; Yi Liu,
| | - Yi Liu
- Department of Stomatology, Sichuan Provincial People’s Hospital, University of Electronic Science and Technology of China, Chengdu, China
- *Correspondence: Yuxiang Yang, ; Yi Liu,
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