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Su R, Li F, Liang Y, Sheoran N, Bai J, Hao L, Ke W, Hu C, Jia M, Usman S, Chen M, Guo X. Responses of microbial community dynamics, co-occurrences, functional shifts, and natural fermentation profiles of Elymus nutans silage to altitudinal gradients. Microbiol Spectr 2024; 12:e0251623. [PMID: 38054628 PMCID: PMC10783144 DOI: 10.1128/spectrum.02516-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Accepted: 11/07/2023] [Indexed: 12/07/2023] Open
Abstract
IMPORTANCE On the Qinghai-Tibet Plateau (QTP), feed shortages are common due to cold environmental conditions and the short growing season of crops. Therefore, effective preservation, such as the ensiling of local forage, is becoming increasingly important to balance the seasonal imbalance between the forage supply and the nutritional needs of domestic animals in this area. However, the structure of the microbial community of the forage, which is influenced by climatic conditions such as altitude differences, has a major impact on the fermentation quality and microbial succession of the ensiled forage. Therefore, we investigated microbial community dynamics, co-occurrence, functional shifts, and natural fermentation profiles of Elymus nutans silage as a function of altitudinal gradients. Results show that silage from Chenduo at higher elevations has better fermentation quality and higher abundance of Lacticaseibacillus and Levilactobacillus than ensiled forage from other regions. This work may contribute to guiding for silage production in QTP.
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Affiliation(s)
- Rina Su
- State Key Laboratory of Grassland Agro-ecosystems, Lanzhou University, Lanzhou, China
- Probiotics and Biological Feed Research Centre, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Fuhou Li
- State Key Laboratory of Grassland Agro-ecosystems, Lanzhou University, Lanzhou, China
- Probiotics and Biological Feed Research Centre, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Ying Liang
- State Key Laboratory of Grassland Agro-ecosystems, Lanzhou University, Lanzhou, China
- Probiotics and Biological Feed Research Centre, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Neha Sheoran
- State Key Laboratory of Grassland Agro-ecosystems, Lanzhou University, Lanzhou, China
- Probiotics and Biological Feed Research Centre, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Jie Bai
- College of Grassland Science, Gansu Agricultural University, Lanzhou, China
| | - Lizhuang Hao
- State Key Laboratory of Plateau Ecology and Agriculture, Key Laboratory of Plateau Grazing Animal Nutrition and Feed Science of Qinghai Province, Academy of Science and Veterinary Medicine of Qinghai University, Xining, China
| | - Wencan Ke
- Department of Animal Science, Ningxia University, Yinchuan, China
| | - Chen Hu
- State Key Laboratory of Grassland Agro-ecosystems, Lanzhou University, Lanzhou, China
- Probiotics and Biological Feed Research Centre, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Mengya Jia
- State Key Laboratory of Grassland Agro-ecosystems, Lanzhou University, Lanzhou, China
- Probiotics and Biological Feed Research Centre, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Samaila Usman
- State Key Laboratory of Grassland Agro-ecosystems, Lanzhou University, Lanzhou, China
- Probiotics and Biological Feed Research Centre, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Mengyan Chen
- State Key Laboratory of Grassland Agro-ecosystems, Lanzhou University, Lanzhou, China
- Probiotics and Biological Feed Research Centre, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Xusheng Guo
- State Key Laboratory of Grassland Agro-ecosystems, Lanzhou University, Lanzhou, China
- Probiotics and Biological Feed Research Centre, School of Life Sciences, Lanzhou University, Lanzhou, China
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Li J, Jia S, Ma D, Deng X, Tian J, Wang R, Li J, Shan A. Effects of citric acid and heterofermentative inoculants on anaerobic co-fermentation of Chinese cabbage waste and wheat bran. BIORESOURCE TECHNOLOGY 2023; 377:128942. [PMID: 36963696 DOI: 10.1016/j.biortech.2023.128942] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Revised: 03/16/2023] [Accepted: 03/19/2023] [Indexed: 06/18/2023]
Abstract
The effects of Lactobacillus buchneri, Lactobacillus hilgardii and citric acid on organic acid production, substrate consumption, protein degradation and microbial community were investigated in this study. The results indicated that combined inoculants induced a significant increase in levels of lactic acid (43 g/kg dry matter), acetic acid (14 g/kg dry matter), butyric acid (5 g/kg dry matter), total organic acid (60 g/kg dry matter) and ammonia nitrogen (20 g/kg total nitrogen). Furthermore, citric acid addition into the combined inoculants caused a significant increase in levels of acetic acid (12 g/kg dry matter), water-soluble carbohydrate (12 g/kg dry matter) and a reduction in ammonia nitrogen formation (22 g/kg total nitrogen). Microbiologically, combining inoculants and citric acid enriched Lactobacillus buchneri and Lactobacillus hilgardii and upregulated the functional pathways related to acid production and resistance. Collectively, combining citric acid and heterofermentative inoculants was beneficial to recycle Chinese cabbage waste in producing organic acids.
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Affiliation(s)
- Jiawei Li
- College of Animal Science and Technology, Northeast Agricultural University, Harbin, China
| | - Shuo Jia
- College of Animal Science and Technology, Northeast Agricultural University, Harbin, China
| | - Dongbo Ma
- College of Animal Science and Technology, Northeast Agricultural University, Harbin, China
| | - Xianglong Deng
- College of Animal Science and Technology, Northeast Agricultural University, Harbin, China
| | - Jiahui Tian
- College of Animal Science and Technology, Northeast Agricultural University, Harbin, China
| | - Ruixue Wang
- College of Animal Science and Technology, Northeast Agricultural University, Harbin, China
| | - Jianping Li
- College of Animal Science and Technology, Northeast Agricultural University, Harbin, China
| | - Anshan Shan
- College of Animal Science and Technology, Northeast Agricultural University, Harbin, China.
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Ridwan R, Abdelbagi M, Sofyan A, Fidriyanto R, Astuti WD, Fitri A, Sholikin MM, Rohmatussolihat, Sarwono KA, Jayanegara A, Widyastuti Y. A meta-analysis to observe silage microbiome differentiated by the use of inoculant and type of raw material. Front Microbiol 2023; 14:1063333. [PMID: 36910222 PMCID: PMC9998704 DOI: 10.3389/fmicb.2023.1063333] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Accepted: 01/09/2023] [Indexed: 03/14/2023] Open
Abstract
Silage fermentation is naturally carried out by lactic acid bacteria (LAB) to mainly produce lactic acid (LA) and other organic acids as preservatives. Along with fermentation time, the growth of LAB will replace and suppress undesirable microorganisms. This meta-analysis study aimed to explore silage microbiome differentiated by LAB inoculants and type of raw materials. A total of 37 articles with 185 studies and 475 datasets were used for building up the meta-database. Data were subjected to the mixed model methodology. The parameters observed were silage quality and silage microbiome post-ensiling process. Results revealed that four bacterial genera along with Weissella dominated the post-ensiling process. The addition of lactic acid inoculants in the silage has increased the abundance of Lactobacillus spp. and decreased the Shannon index significantly. Moreover, the abundance of both L. plantarum and L. buchneri increased, and subsequently, Weissella, Pseudomonas, Proteobacteria, pH value, ammoniacal nitrogen (NH3-N), coliforms, and the yeasts were decreased significantly due to the addition of LAB inoculants in silage (p < 0.05). Environmental factors such as temperature affected the existence of Pseudomonas, Exiguobacterium, and Acinetobacter. However, the dry matter, LA, acetic acid (AA), the ratio of LA to AA, and the LAB population were enhanced significantly (p < 0.05). Among the LAB types, the lowest abundance of Pseudomonas was due to the LAB group, while the lowest abundance of Weissella and Proteobacteria was due to the addition of the combined LAB group. In conclusion, the addition of LAB is effectively enhancing the silage microbiome and silage quality by altering bacterial diversity and the metabolic products of the silage materials for safe preservation.
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Affiliation(s)
- Roni Ridwan
- Research Center for Applied Zoology, National Research and Innovation Agency (BRIN), Cibinong, Indonesia.,Animal Feed and Nutrition Modelling (AFENUE) Research Group, Department of Nutrition and Feed Technology, Faculty of Animal Science, IPB University, Bogor, Indonesia
| | - Mohammed Abdelbagi
- Animal Feed and Nutrition Modelling (AFENUE) Research Group, Department of Nutrition and Feed Technology, Faculty of Animal Science, IPB University, Bogor, Indonesia.,Department of Animal Nutrition, Faculty of Animal Production University of Khartoum, Khartoum North, Sudan.,Study Program of Nutrition and Feed Science, Graduate School of IPB University, Bogor, Indonesia
| | - Ahmad Sofyan
- Animal Feed and Nutrition Modelling (AFENUE) Research Group, Department of Nutrition and Feed Technology, Faculty of Animal Science, IPB University, Bogor, Indonesia.,Research Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Cibinong, Indonesia
| | - Rusli Fidriyanto
- Research Center for Applied Zoology, National Research and Innovation Agency (BRIN), Cibinong, Indonesia.,Animal Feed and Nutrition Modelling (AFENUE) Research Group, Department of Nutrition and Feed Technology, Faculty of Animal Science, IPB University, Bogor, Indonesia.,Study Program of Nutrition and Feed Science, Graduate School of IPB University, Bogor, Indonesia
| | - Wulansih D Astuti
- Research Center for Applied Zoology, National Research and Innovation Agency (BRIN), Cibinong, Indonesia.,Animal Feed and Nutrition Modelling (AFENUE) Research Group, Department of Nutrition and Feed Technology, Faculty of Animal Science, IPB University, Bogor, Indonesia
| | - Ainissya Fitri
- Research Center for Applied Zoology, National Research and Innovation Agency (BRIN), Cibinong, Indonesia.,Animal Feed and Nutrition Modelling (AFENUE) Research Group, Department of Nutrition and Feed Technology, Faculty of Animal Science, IPB University, Bogor, Indonesia
| | - Mohammad M Sholikin
- Animal Feed and Nutrition Modelling (AFENUE) Research Group, Department of Nutrition and Feed Technology, Faculty of Animal Science, IPB University, Bogor, Indonesia.,Research Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Cibinong, Indonesia
| | - Rohmatussolihat
- Research Center for Applied Zoology, National Research and Innovation Agency (BRIN), Cibinong, Indonesia.,Study Program of Nutrition and Feed Science, Graduate School of IPB University, Bogor, Indonesia
| | - Ki A Sarwono
- Research Center for Applied Zoology, National Research and Innovation Agency (BRIN), Cibinong, Indonesia.,Animal Feed and Nutrition Modelling (AFENUE) Research Group, Department of Nutrition and Feed Technology, Faculty of Animal Science, IPB University, Bogor, Indonesia
| | - Anuraga Jayanegara
- Animal Feed and Nutrition Modelling (AFENUE) Research Group, Department of Nutrition and Feed Technology, Faculty of Animal Science, IPB University, Bogor, Indonesia.,Department of Nutrition and Feed Technology, IPB University, Bogor, Indonesia
| | - Yantyati Widyastuti
- Research Center for Applied Zoology, National Research and Innovation Agency (BRIN), Cibinong, Indonesia
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Xie Y, Du E, Yao Y, Wang W, Huang X, Sun H, Zheng Y, Cheng Q, Wang C, Chen C, Li P. Effect of epiphytic microflora after aerobic enrichment and reconstitution on fermentation quality and microbial community of corn stalk silage and Pennisetum sinese silage. Front Microbiol 2022; 13:1078408. [DOI: 10.3389/fmicb.2022.1078408] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Accepted: 11/14/2022] [Indexed: 12/03/2022] Open
Abstract
IntroductionThe objective of this study was to evaluate the effects of enrichment and reconstitution of the forage epiphytic microflora on the fermentation quality, chemical composition, and bacterial community composition of corn stalk and Pennisetum sinese silages.MethodsThe forage juice of fresh corn stalk and P. sinese were collected, diluted by gradient (10–1 to 10–5), and aerobically incubated to enrich and reconstitute the epiphytic microflora. Fresh corn stalk and P. sinese were ensiled for 3, 15, and 45 days after inoculation with either the original (D0) pre-incubated juices, or 10–1 (D1), 10–3 (D3), or 10–5 (D5) diluted and pre-incubated juices.ResultsThe lowest pH was found in the D3 treatment of the corn stalk silage. In P. sinese silage, the hemicellulose content of D3 and D5 treatments was 9.50 and 11.81% lower than that of D0 treatment (P < 0.05). In corn stalk silage, the neutral detergent fiber content was significantly lower in the D3 treatment than in the other treatments (P < 0.05). Both corn stalk and P. sinese silages exhibited a high abundance of Enterobacter during ensiling, resulting in high levels of acetic acid.ConclusionAlthough the dilution and enrichment of the epiphytic microflora did not lead to full lactic acid fermentation, these pre-treatments were found to alter the microbial metabolites and chemical composition of the silage. These results provide a new perspective on the production of pre-fermented silage inoculant.
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