1
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Fischer MHF, Zibrandtsen IC, Høgh P, Musaeus CS. Systematic Review of EEG Coherence in Alzheimer's Disease. J Alzheimers Dis 2023; 91:1261-1272. [PMID: 36641665 DOI: 10.3233/jad-220508] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
BACKGROUND Magnitude-squared coherence (MSCOH) is an electroencephalography (EEG) measure of functional connectivity. MSCOH has been widely applied to investigate pathological changes in patients with Alzheimer's disease (AD). However, significant heterogeneity exists between the studies using MSOCH. OBJECTIVE We systematically reviewed the literature on MSCOH changes in AD as compared to healthy controls to investigate the clinical utility of MSCOH as a marker of AD. METHODS We searched PubMed, Embase, and Scopus to identify studies reporting EEG MSCOH used in patients with AD. The identified studies were independently screened by two researchers and the data was extracted, which included cognitive scores, preprocessing steps, and changes in MSCOH across frequency bands. RESULTS A total of 35 studies investigating changes in MSCOH in patients with AD were included in the review. Alpha coherence was significantly decreased in patients with AD in 24 out of 34 studies. Differences in other frequency bands were less consistent. Some studies showed that MSCOH may serve as a diagnostic marker of AD. CONCLUSION Reduced alpha MSCOH is present in patients with AD and MSCOH may serve as a diagnostic marker. However, studies validating MSCOH as a diagnostic marker are needed.
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Affiliation(s)
| | | | - Peter Høgh
- Department of Neurology, University Hospital of Zealand, Roskilde, Denmark.,Department of Clinical Medicine, University of Copenhagen, Copenhagen, Denmark
| | - Christian Sandøe Musaeus
- Department of Neurology, Danish Dementia Research Centre (DDRC), Copenhagen University Hospital Rigshospitalet, Copenhagen, Denmark
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2
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Using CNN Saliency Maps and EEG Modulation Spectra for Improved and More Interpretable Machine Learning-Based Alzheimer's Disease Diagnosis. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2023; 2023:3198066. [PMID: 36818579 PMCID: PMC9931465 DOI: 10.1155/2023/3198066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/09/2022] [Revised: 09/15/2022] [Accepted: 01/11/2023] [Indexed: 02/11/2023]
Abstract
Biomarkers based on resting-state electroencephalography (EEG) signals have emerged as a promising tool in the study of Alzheimer's disease (AD). Recently, a state-of-the-art biomarker was found based on visual inspection of power modulation spectrograms where three "patches" or regions from the modulation spectrogram were proposed and used for AD diagnostics. Here, we propose the use of deep neural networks, in particular convolutional neural networks (CNNs) combined with saliency maps, trained on power modulation spectrogram inputs to find optimal patches in a data-driven manner. Experiments are conducted on EEG data collected from fifty-four participants, including 20 healthy controls, 19 patients with mild AD, and 15 moderate-to-severe AD patients. Five classification tasks are explored, including the three-class problem, early-stage detection (control vs. mild-AD), and severity level detection (mild vs. moderate-to-severe). Experimental results show the proposed biomarkers outperform the state-of-the-art benchmark across all five tasks, as well as finding complementary modulation spectrogram regions not previously seen via visual inspection. Lastly, experiments are conducted on the proposed biomarkers to test their sensitivity to age, as this is a known confound in AD characterization. Across all five tasks, none of the proposed biomarkers showed a significant relationship with age, thus further highlighting their usefulness for automated AD diagnostics.
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3
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Yang S, Hwang HS, Zhu BH, Chen J, Enkhzaya G, Wang ZJ, Kim ES, Kim NY. Evaluating the Alterations Induced by Virtual Reality in Cerebral Small-World Networks Using Graph Theory Analysis with Electroencephalography. Brain Sci 2022; 12:brainsci12121630. [PMID: 36552090 PMCID: PMC9776076 DOI: 10.3390/brainsci12121630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2022] [Revised: 11/13/2022] [Accepted: 11/25/2022] [Indexed: 11/30/2022] Open
Abstract
Virtual reality (VR), a rapidly evolving technology that simulates three-dimensional virtual environments for users, has been proven to activate brain functions. However, the continuous alteration pattern of the functional small-world network in response to comprehensive three-dimensional stimulation rather than realistic two-dimensional media stimuli requires further exploration. Here, we aimed to validate the effect of VR on the pathways and network parameters of a small-world organization and interpret its mechanism of action. Fourteen healthy volunteers were selected to complete missions in an immersive VR game. The changes in the functional network in six different frequency categories were analyzed using graph theory with electroencephalography data measured during the pre-, VR, and post-VR stages. The mutual information matrix revealed that interactions between the frontal and posterior areas and those within the frontal and occipital lobes were strengthened. Subsequently, the betweenness centrality (BC) analysis indicated more robust and extensive pathways among hubs. Furthermore, a specific lateralized channel (O1 or O2) increment in the BC was observed. Moreover, the network parameters improved simultaneously in local segregation, global segregation, and global integration. The overall topological improvements of small-world organizations were in high-frequency bands and exhibited some degree of sustainability.
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Affiliation(s)
- Shan Yang
- RFIC Center, Department of Electronic Engineering, Kwangwoon University, Seoul 01897, Republic of Korea
- NDAC Center, Kwangwoon University, Seoul 01897, Republic of Korea
| | - Hyeon-Sik Hwang
- RFIC Center, Department of Electronic Engineering, Kwangwoon University, Seoul 01897, Republic of Korea
| | - Bao-Hua Zhu
- RFIC Center, Department of Electronic Engineering, Kwangwoon University, Seoul 01897, Republic of Korea
- NDAC Center, Kwangwoon University, Seoul 01897, Republic of Korea
| | - Jian Chen
- RFIC Center, Department of Electronic Engineering, Kwangwoon University, Seoul 01897, Republic of Korea
- NDAC Center, Kwangwoon University, Seoul 01897, Republic of Korea
| | - Ganbold Enkhzaya
- RFIC Center, Department of Electronic Engineering, Kwangwoon University, Seoul 01897, Republic of Korea
- NDAC Center, Kwangwoon University, Seoul 01897, Republic of Korea
| | - Zhi-Ji Wang
- RFIC Center, Department of Electronic Engineering, Kwangwoon University, Seoul 01897, Republic of Korea
- Department of Pediatrics, Severance Children’s Hospital, Yonsei University, Seoul 03722, Republic of Korea
- Correspondence: (Z.-J.W.); (E.-S.K.); (N.-Y.K.)
| | - Eun-Seong Kim
- RFIC Center, Department of Electronic Engineering, Kwangwoon University, Seoul 01897, Republic of Korea
- WAVEPIA Co., Ltd., 557, Dongtangiheung-ro, Hwaseong-si 18469, Republic of Korea
- Correspondence: (Z.-J.W.); (E.-S.K.); (N.-Y.K.)
| | - Nam-Young Kim
- RFIC Center, Department of Electronic Engineering, Kwangwoon University, Seoul 01897, Republic of Korea
- NDAC Center, Kwangwoon University, Seoul 01897, Republic of Korea
- Correspondence: (Z.-J.W.); (E.-S.K.); (N.-Y.K.)
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4
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Trambaiolli LR, Cassani R, Biazoli CE, Cravo AM, Sato JR, Falk TH. Multimodal resting-state connectivity predicts affective neurofeedback performance. Front Hum Neurosci 2022; 16:977776. [PMID: 36158618 PMCID: PMC9493361 DOI: 10.3389/fnhum.2022.977776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Accepted: 08/03/2022] [Indexed: 11/13/2022] Open
Abstract
Neurofeedback has been suggested as a potential complementary therapy to different psychiatric disorders. Of interest for this approach is the prediction of individual performance and outcomes. In this study, we applied functional connectivity-based modeling using electroencephalography (EEG) and functional near-infrared spectroscopy (fNIRS) modalities to (i) investigate whether resting-state connectivity predicts performance during an affective neurofeedback task and (ii) evaluate the extent to which predictive connectivity profiles are correlated across EEG and fNIRS techniques. The fNIRS oxyhemoglobin and deoxyhemoglobin concentrations and the EEG beta and gamma bands modulated by the alpha frequency band (beta-m-alpha and gamma-m-alpha, respectively) recorded over the frontal cortex of healthy subjects were used to estimate functional connectivity from each neuroimaging modality. For each connectivity matrix, relevant edges were selected in a leave-one-subject-out procedure, summed into "connectivity summary scores" (CSS), and submitted as inputs to a support vector regressor (SVR). Then, the performance of the left-out-subject was predicted using the trained SVR model. Linear relationships between the CSS across both modalities were evaluated using Pearson's correlation. The predictive model showed a mean absolute error smaller than 20%, and the fNIRS oxyhemoglobin CSS was significantly correlated with the EEG gamma-m-alpha CSS (r = -0.456, p = 0.030). These results support that pre-task electrophysiological and hemodynamic resting-state connectivity are potential predictors of neurofeedback performance and are meaningfully coupled. This investigation motivates the use of joint EEG-fNIRS connectivity as outcome predictors, as well as a tool for functional connectivity coupling investigation.
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Affiliation(s)
- Lucas R. Trambaiolli
- Basic Neuroscience Division, McLean Hospital–Harvard Medical School, Belmont, MA, United States
| | - Raymundo Cassani
- McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University, Montreal, QC, Canada
| | - Claudinei E. Biazoli
- Center for Mathematics, Computing and Cognition, Federal University of ABC, São Bernardo do Campo, Brazil
- School of Biological and Behavioural Sciences, Queen Mary University of London, London, United Kingdom
| | - André M. Cravo
- Center for Mathematics, Computing and Cognition, Federal University of ABC, São Bernardo do Campo, Brazil
| | - João R. Sato
- Center for Mathematics, Computing and Cognition, Federal University of ABC, São Bernardo do Campo, Brazil
- Big Data, Hospital Israelita Albert Einstein, São Paulo, Brazil
| | - Tiago H. Falk
- Institut National de la Recherche Scientifique, University of Quebec, Montreal, QC, Canada
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5
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Cura OK, Akan A, Yilmaz GC, Ture HS. Detection of Alzheimer's Dementia by Using Signal Decomposition and Machine Learning Methods. Int J Neural Syst 2022; 32:2250042. [DOI: 10.1142/s0129065722500423] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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6
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Tiwari A, Cassani R, Kshirsagar S, Tobon DP, Zhu Y, Falk TH. Modulation Spectral Signal Representation for Quality Measurement and Enhancement of Wearable Device Data: A Technical Note. SENSORS 2022; 22:s22124579. [PMID: 35746361 PMCID: PMC9229858 DOI: 10.3390/s22124579] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 06/14/2022] [Accepted: 06/15/2022] [Indexed: 02/04/2023]
Abstract
Wearable devices are burgeoning, and applications across numerous verticals are emerging, including human performance monitoring, at-home patient monitoring, and health tracking, to name a few. Off-the-shelf wearables have been developed with focus on portability, usability, and low-cost. As such, when deployed in highly ecological settings, wearable data can be corrupted by artifacts and by missing data, thus severely hampering performance. In this technical note, we overview a signal processing representation called the modulation spectrum. The representation quantifies the rate-of-change of different spectral magnitude components and is shown to separate signal from noise, thus allowing for improved quality measurement, quality enhancement, and noise-robust feature extraction, as well as for disease characterization. We provide an overview of numerous applications developed by the authors over the last decade spanning different wearable modalities and list the results obtained from experimental results alongside comparisons with various state-of-the-art benchmark methods. Open-source software is showcased with the hope that new applications can be developed. We conclude with a discussion on possible future research directions, such as context awareness, signal compression, and improved input representations for deep learning algorithms.
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Affiliation(s)
- Abhishek Tiwari
- Institut National de la Recherche Scientifique, University of Quebec, Montréal, QC H5A 1K6, Canada; (A.T.); (S.K.); (Y.Z.)
- Myant Inc., Toronto, ON M9W 1B6, Canada
| | - Raymundo Cassani
- McConnell Brain Imaging Centre, Montreal Neurological Institute, McGill University, Montréal, QC H3A 2B4, Canada;
| | - Shruti Kshirsagar
- Institut National de la Recherche Scientifique, University of Quebec, Montréal, QC H5A 1K6, Canada; (A.T.); (S.K.); (Y.Z.)
| | - Diana P. Tobon
- Faculty of Engineering, Universidad de Medellín, Medellín 050026, Colombia;
| | - Yi Zhu
- Institut National de la Recherche Scientifique, University of Quebec, Montréal, QC H5A 1K6, Canada; (A.T.); (S.K.); (Y.Z.)
| | - Tiago H. Falk
- Institut National de la Recherche Scientifique, University of Quebec, Montréal, QC H5A 1K6, Canada; (A.T.); (S.K.); (Y.Z.)
- Correspondence:
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7
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Li X, Zhou T, Qiu S. Alzheimer's Disease Analysis Algorithm Based on No-threshold Recurrence Plot Convolution Network. Front Aging Neurosci 2022; 14:888577. [PMID: 35619941 PMCID: PMC9127346 DOI: 10.3389/fnagi.2022.888577] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 04/07/2022] [Indexed: 11/13/2022] Open
Abstract
Alzheimer's disease is a neurological disorder characterized by progressive cognitive dysfunction and behavioral impairment that occurs in old. Early diagnosis and treatment of Alzheimer's disease is great significance. Electroencephalography (EEG) signals can be used to detect Alzheimer's disease due to its non-invasive advantage. To solve the problem of insufficient analysis by single-channel EEG signal, we analyze the relationship between multiple channels and build PLV framework. To solve the problem of insufficient representation of 1D signal, a threshold-free recursive plot convolution network was constructed to realize 2D representation. To solve the problem of insufficient EEG signal characterization, a fusion algorithm of clinical features and imaging features was proposed to detect Alzheimer's disease. Experimental results show that the algorithm has good performance and robustness.
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Affiliation(s)
- Xuemei Li
- School of Mechanical and Electrical Engineering, Chengdu University of Technology, Chengdu, China
| | - Tao Zhou
- School of Computer Science and Engineering, North Minzu University, Yinchuan, China
- *Correspondence: Tao Zhou
| | - Shi Qiu
- Key Laboratory of Spectral Imaging Technology CAS, Xi'an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi'an, China
- Shi Qiu
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8
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Jesus B, Cassani R, McGeown WJ, Cecchi M, Fadem KC, Falk TH. Multimodal Prediction of Alzheimer's Disease Severity Level Based on Resting-State EEG and Structural MRI. Front Hum Neurosci 2021; 15:700627. [PMID: 34566600 PMCID: PMC8458963 DOI: 10.3389/fnhum.2021.700627] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Accepted: 08/05/2021] [Indexed: 11/13/2022] Open
Abstract
While several biomarkers have been developed for the detection of Alzheimer's disease (AD), not many are available for the prediction of disease severity, particularly for patients in the mild stages of AD. In this paper, we explore the multimodal prediction of Mini-Mental State Examination (MMSE) scores using resting-state electroencephalography (EEG) and structural magnetic resonance imaging (MRI) scans. Analyses were carried out on a dataset comprised of EEG and MRI data collected from 89 patients diagnosed with minimal-mild AD. Three feature selection algorithms were assessed alongside four machine learning algorithms. Results showed that while MRI features alone outperformed EEG features, when both modalities were combined, improved results were achieved. The top-selected EEG features conveyed information about amplitude modulation rate-of-change, whereas top-MRI features comprised information about cortical area and white matter volume. Overall, a root mean square error between predicted MMSE values and true MMSE scores of 1.682 was achieved with a multimodal system and a random forest regression model.
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Affiliation(s)
- Belmir Jesus
- Institut National de la Recherche Scientifique, University of Quebec, Montreal, QC, Canada
| | - Raymundo Cassani
- Institut National de la Recherche Scientifique, University of Quebec, Montreal, QC, Canada
| | - William J McGeown
- School of Psychological Sciences and Health, University of Strathclyde, Glasgow, United Kingdom
| | | | - K C Fadem
- COGNISION, Louisville, KY, United States
| | - Tiago H Falk
- Institut National de la Recherche Scientifique, University of Quebec, Montreal, QC, Canada
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9
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Bisht A, Singh P, Kaur C, Agarwal S, Ajmani M. Progress and Challenges in Physiological Artifacts' Detection in Electroencephalographic Readings. Curr Med Imaging 2021; 18:509-531. [PMID: 34503420 DOI: 10.2174/1573405617666210908124704] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2020] [Revised: 05/04/2021] [Accepted: 06/08/2021] [Indexed: 11/22/2022]
Abstract
BACKGROUND Electroencephalographic (EEG) recordings are used to trace neural activity within the cortex to study brain functioning over time. INTRODUCTION During data acquisition, the unequivocal way to reduce artifact is to avoid artifact stimulating events. Though there are certain artifacts that make this task challenging due to their association with the internal human mechanism, in the human-computer interface, these physiological artifacts are of great assistance and act as a command signal for controlling a device or an application (communication). That is why pre-processing of electroencephalographic readings has been a progressive area of exploration, as none of the published work can be viewed as a benchmark for constructive artifact handling. METHOD This review offers a comprehensive insight into state of the art physiological artifact removal techniques listed so far. The study commences from the single-stage traditional techniques to the multistage techniques, examining the pros and cons of each discussed technique. Also, this review paper gives a general idea of various datasets available and briefs the topical trend in EEG signal processing. RESULT Comparing the state of the art techniques with hybrid ones on the basis of performance and computational complexity, it has been observed that the single-channel techniques save computational time but lack in effective artifact removal especially physiological artifacts. On the other hand, hybrid techniques merge the essential characteristics resulting in increased performance, but time consumption and complexity remain an issue. CONCLUSION Considering the high probability of the presence of multiple artifacts in EEG channels, a trade-off between performance, time and computational complexity is the only key for effective processing of artifacts in the time ahead. This paper is anticipated to facilitate upcoming researchers in enriching the contemporary artifact handling techniques to mitigate the expert's burden.
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Affiliation(s)
- Amandeep Bisht
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
| | - Preeti Singh
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
| | - Chamandeep Kaur
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
| | - Sunil Agarwal
- Department of Electronics and Communications, UIET, Sector 25, Panjab University, Chandigarh-160014. India
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10
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Ranjan R, Chandra Sahana B, Kumar Bhandari A. Ocular artifact elimination from electroencephalography signals: A systematic review. Biocybern Biomed Eng 2021. [DOI: 10.1016/j.bbe.2021.06.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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11
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Rosanne O, Albuquerque I, Cassani R, Gagnon JF, Tremblay S, Falk TH. Adaptive Filtering for Improved EEG-Based Mental Workload Assessment of Ambulant Users. Front Neurosci 2021; 15:611962. [PMID: 33897342 PMCID: PMC8058356 DOI: 10.3389/fnins.2021.611962] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Accepted: 03/08/2021] [Indexed: 11/13/2022] Open
Abstract
Recently, due to the emergence of mobile electroencephalography (EEG) devices, assessment of mental workload in highly ecological settings has gained popularity. In such settings, however, motion and other common artifacts have been shown to severely hamper signal quality and to degrade mental workload assessment performance. Here, we show that classical EEG enhancement algorithms, conventionally developed to remove ocular and muscle artifacts, are not optimal in settings where participant movement (e.g., walking or running) is expected. As such, an adaptive filter is proposed that relies on an accelerometer-based referential signal. We show that when combined with classical algorithms, accurate mental workload assessment is achieved. To test the proposed algorithm, data from 48 participants was collected as they performed the Revised Multi-Attribute Task Battery-II (MATB-II) under a low and a high workload setting, either while walking/jogging on a treadmill, or using a stationary exercise bicycle. Accuracy as high as 95% could be achieved with a random forest based mental workload classifier with ambulant users. Moreover, an increase in gamma activity was found in the parietal cortex, suggesting a connection between sensorimotor integration, attention, and workload in ambulant users.
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Affiliation(s)
- Olivier Rosanne
- Institut National de la Recherche Scientifique - Centre Énergie, Matériaux et Télécomunication, Université du Québec, Montréal, QC, Canada
| | - Isabela Albuquerque
- Institut National de la Recherche Scientifique - Centre Énergie, Matériaux et Télécomunication, Université du Québec, Montréal, QC, Canada
| | - Raymundo Cassani
- Institut National de la Recherche Scientifique - Centre Énergie, Matériaux et Télécomunication, Université du Québec, Montréal, QC, Canada
| | | | | | - Tiago H Falk
- Institut National de la Recherche Scientifique - Centre Énergie, Matériaux et Télécomunication, Université du Québec, Montréal, QC, Canada
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12
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Yang W, Pilozzi A, Huang X. An Overview of ICA/BSS-Based Application to Alzheimer's Brain Signal Processing. Biomedicines 2021; 9:386. [PMID: 33917280 PMCID: PMC8067382 DOI: 10.3390/biomedicines9040386] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Revised: 03/29/2021] [Accepted: 03/30/2021] [Indexed: 11/16/2022] Open
Abstract
Alzheimer's disease (AD) is by far the most common cause of dementia associated with aging. Early and accurate diagnosis of AD and ability to track progression of the disease is increasingly important as potential disease-modifying therapies move through clinical trials. With the advent of biomedical techniques, such as computerized tomography (CT), electroencephalography (EEG), magnetoencephalography (MEG), positron emission tomography (PET), magnetic resonance imaging (MRI), and functional magnetic resonance imaging (fMRI), large amounts of data from Alzheimer's patients have been acquired and processed from which AD-related information or "signals" can be assessed for AD diagnosis. It remains unknown how best to mine complex information from these brain signals to aid in early diagnosis of AD. An increasingly popular technique for processing brain signals is independent component analysis or blind source separation (ICA/BSS) that separates blindly observed signals into original signals that are as independent as possible. This overview focuses on ICA/BSS-based applications to AD brain signal processing.
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Affiliation(s)
- Wenlu Yang
- Department of Electrical Engineering, Information Engineering College, Shanghai Maritime University, Shanghai 200135, China;
| | - Alexander Pilozzi
- Department of Psychiatry, Massachusetts General Hospital and Harvard Medical School, Charlestown, MA 02129, USA;
| | - Xudong Huang
- Department of Psychiatry, Massachusetts General Hospital and Harvard Medical School, Charlestown, MA 02129, USA;
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13
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Perez-Valero E, Lopez-Gordo MA, Morillas C, Pelayo F, Vaquero-Blasco MA. A Review of Automated Techniques for Assisting the Early Detection of Alzheimer's Disease with a Focus on EEG. J Alzheimers Dis 2021; 80:1363-1376. [PMID: 33682717 DOI: 10.3233/jad-201455] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
In this paper, we review state-of-the-art approaches that apply signal processing (SP) and machine learning (ML) to automate the detection of Alzheimer's disease (AD) and its prodromal stages. In the first part of the document, we describe the economic and social implications of the disease, traditional diagnosis techniques, and the fundaments of automated AD detection. Then, we present electroencephalography (EEG) as an appropriate alternative for the early detection of AD, owing to its reduced cost, portability, and non-invasiveness. We also describe the main time and frequency domain EEG features that are employed in AD detection. Subsequently, we examine some of the main studies of the last decade that aim to provide an automatic detection of AD and its previous stages by means of SP and ML. In these studies, brain data was acquired using multiple medical techniques such as magnetic resonance imaging, positron emission tomography, and EEG. The main aspects of each approach, namely feature extraction, classification model, validation approach, and performance metrics, are compiled and discussed. Lastly, a set of conclusions and recommendations for future research on AD automatic detection are drawn in the final section of the paper.
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Affiliation(s)
- Eduardo Perez-Valero
- Research Centre for Information and Communications Technologies (CITIC), University of Granada, Granada, Spain.,Department of Computer Architecture and Technology, University of Granada, Granada, Spain
| | - Miguel A Lopez-Gordo
- Department of Signal Theory, Telematics and Communications, University of Granada, Granada,Spain.,Nicolo Association, Churriana de la Vega, Spain
| | - Christian Morillas
- Research Centre for Information and Communications Technologies (CITIC), University of Granada, Granada, Spain.,Department of Computer Architecture and Technology, University of Granada, Granada, Spain
| | - Francisco Pelayo
- Research Centre for Information and Communications Technologies (CITIC), University of Granada, Granada, Spain.,Department of Computer Architecture and Technology, University of Granada, Granada, Spain
| | - Miguel A Vaquero-Blasco
- Research Centre for Information and Communications Technologies (CITIC), University of Granada, Granada, Spain.,Department of Signal Theory, Telematics and Communications, University of Granada, Granada,Spain
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14
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Tzimourta KD, Christou V, Tzallas AT, Giannakeas N, Astrakas LG, Angelidis P, Tsalikakis D, Tsipouras MG. Machine Learning Algorithms and Statistical Approaches for Alzheimer's Disease Analysis Based on Resting-State EEG Recordings: A Systematic Review. Int J Neural Syst 2021; 31:2130002. [PMID: 33588710 DOI: 10.1142/s0129065721300023] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Alzheimer's Disease (AD) is a neurodegenerative disorder and the most common type of dementia with a great prevalence in western countries. The diagnosis of AD and its progression is performed through a variety of clinical procedures including neuropsychological and physical examination, Electroencephalographic (EEG) recording, brain imaging and blood analysis. During the last decades, analysis of the electrophysiological dynamics in AD patients has gained great research interest, as an alternative and cost-effective approach. This paper summarizes recent publications focusing on (a) AD detection and (b) the correlation of quantitative EEG features with AD progression, as it is estimated by Mini Mental State Examination (MMSE) score. A total of 49 experimental studies published from 2009 until 2020, which apply machine learning algorithms on resting state EEG recordings from AD patients, are reviewed. Results of each experimental study are presented and compared. The majority of the studies focus on AD detection incorporating Support Vector Machines, while deep learning techniques have not yet been applied on large EEG datasets. Promising conclusions for future studies are presented.
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Affiliation(s)
- Katerina D Tzimourta
- Department of Electrical and Computer Engineering, University of Western Macedonia, Kozani, GR50100, Greece.,Department of Medical Physics, Medical School, University of Ioannina, Ioannina GR45110, Greece
| | - Vasileios Christou
- Q Base R&D, Science & Technology Park of Epirus, University of Ioannina Campus, Ioannina GR45110, Greece.,Department of Informatics and Telecommunications, School of Informatics and Telecommunications, University of Ioannina, Arta GR47100, Greece
| | - Alexandros T Tzallas
- Department of Informatics and Telecommunications, School of Informatics and Telecommunications, University of Ioannina, Arta GR47100, Greece
| | - Nikolaos Giannakeas
- Department of Informatics and Telecommunications, School of Informatics and Telecommunications, University of Ioannina, Arta GR47100, Greece
| | - Loukas G Astrakas
- Department of Medical Physics, Medical School, University of Ioannina, Ioannina GR45110, Greece
| | - Pantelis Angelidis
- Department of Electrical and Computer Engineering, University of Western Macedonia, Kozani GR50100, Greece
| | - Dimitrios Tsalikakis
- Department of Electrical and Computer Engineering, University of Western Macedonia, Kozani GR50100, Greece
| | - Markos G Tsipouras
- Department of Electrical and Computer Engineering, University of Western Macedonia, Kozani GR50100, Greece
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15
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Parent M, Albuquerque I, Tiwari A, Cassani R, Gagnon JF, Lafond D, Tremblay S, Falk TH. PASS: A Multimodal Database of Physical Activity and Stress for Mobile Passive Body/ Brain-Computer Interface Research. Front Neurosci 2020; 14:542934. [PMID: 33363449 PMCID: PMC7753022 DOI: 10.3389/fnins.2020.542934] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2020] [Accepted: 11/16/2020] [Indexed: 12/27/2022] Open
Abstract
With the burgeoning of wearable devices and passive body/brain-computer interfaces (B/BCIs), automated stress monitoring in everyday settings has gained significant attention recently, with applications ranging from serious games to clinical monitoring. With mobile users, however, challenges arise due to other overlapping (and potentially confounding) physiological responses (e.g., due to physical activity) that may mask the effects of stress, as well as movement artifacts that can be introduced in the measured signals. For example, the classical increase in heart rate can no longer be attributed solely to stress and could be caused by the activity itself. This makes the development of mobile passive B/BCIs challenging. In this paper, we introduce PASS, a multimodal database of Physical Activity and StresS collected from 48 participants. Participants performed tasks of varying stress levels at three different activity levels and provided quantitative ratings of their perceived stress and fatigue levels. To manipulate stress, two video games (i.e., a calm exploration game and a survival game) were used. Peripheral physical activity (electrocardiography, electrodermal activity, breathing, skin temperature) as well as cerebral activity (electroencephalography) were measured throughout the experiment. A complete description of the experimental protocol is provided and preliminary analyses are performed to investigate the physiological reactions to stress in the presence of physical activity. The PASS database, including raw data and subjective ratings has been made available to the research community at http://musaelab.ca/pass-database/. It is hoped that this database will help advance mobile passive B/BCIs for use in everyday settings.
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Affiliation(s)
- Mark Parent
- INRS-EMT, Université du Québec, Montréal, QC, Canada
| | | | | | | | | | - Daniel Lafond
- Thales Research and Technology Canada, Quebec City, QC, Canada
| | | | - Tiago H Falk
- INRS-EMT, Université du Québec, Montréal, QC, Canada.,PERFORM Center, Concordia University, Montréal, QC, Canada
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Ge Q, Lin ZC, Gao YX, Zhang JX. A Robust Discriminant Framework Based on Functional Biomarkers of EEG and Its Potential for Diagnosis of Alzheimer's Disease. Healthcare (Basel) 2020; 8:healthcare8040476. [PMID: 33187374 PMCID: PMC7712949 DOI: 10.3390/healthcare8040476] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Revised: 11/08/2020] [Accepted: 11/09/2020] [Indexed: 01/21/2023] Open
Abstract
(1) Background: Growing evidence suggests that electroencephalography (EEG), recording the brain’s electrical activity, can be a promising diagnostic tool for Alzheimer’s disease (AD). The diagnostic biomarkers based on quantitative EEG (qEEG) have been extensively explored, but few of them helped clinicians in their everyday practice, and reliable qEEG markers are still lacking. The study aims to find robust EEG biomarkers and propose a systematic discrimination framework based on signal processing and computer-aided techniques to distinguish AD patients from normal elderly controls (NC). (2) Methods: In the proposed study, EEG signals were preprocessed firstly and Maximal overlap discrete wavelet transform (MODWT) was applied to the preprocessed signals. Variance, Pearson correlation coefficient, interquartile range, Hoeffding’s D measure, and Permutation entropy were extracted as the input of the candidate classifiers. The AD vs. NC discriminant performance of each model was evaluated and an automatic diagnostic framework was eventually developed. (3) Results: A classification procedure based on the extracted EEG features and linear discriminant analysis based classifier achieved the accuracy of 93.18 ± 3.65 (%), the AUC of 97.92 ± 1.66 (%), the F-measure of 94.06 ± 4.04 (%), separately. (4) Conclusions: The developed discrimination framework can identify AD from NC with high performance in a systematic routine.
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Trambaiolli LR, Biazoli CE. Resting-state global EEG connectivity predicts depression and anxiety severity. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2020:3707-3710. [PMID: 33018806 DOI: 10.1109/embc44109.2020.9176161] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
There is a recent interest in finding neurophysiological biomarkers which will facilitate the diagnosis and understanding of the neural basis of different psychiatric disorders. In this paper, we evaluated the resting-state global EEG connectivity as a potential biomarker for depressive and anxiety symptoms. For this, we evaluated a population of 119 subjects, including 75 healthy subjects and 44 patients with major depressive disorder. We calculated the global connectivity (spectral coherence) in a setup of 60 EEG channels, for six different spectral bands: theta, alpha1, alpha2, beta1, beta2, and gamma. These global connectivity scores were used to train a Support Vector Regressor to predict symptoms measured by the Beck Depression Inventory (BDI) and the Spielberger Trait Anxiety Inventory (TAI). Experiments showed a significant prediction of both symptoms, with a mean absolute error (MAE) of 8.07±6.98 and 11.52±8.7 points, respectively. Among the most discriminating features, the global connectivity in the alpha2 band (10.0-12.0Hz) presented significantly positive Spearman's correlation with the depressive (rho = 0.32, pFDR <0.01), and the anxiety symptoms (rho = 0.26, pFDR<0.01).Clinical relevance-This study demonstrates that EEG global connectivity can be used to predict depression and anxiety symptoms measured by widely used questionnaires.
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18
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Early diagnosis of Alzheimer’s disease: the role of biomarkers including advanced EEG signal analysis. Report from the IFCN-sponsored panel of experts. Clin Neurophysiol 2020; 131:1287-1310. [DOI: 10.1016/j.clinph.2020.03.003] [Citation(s) in RCA: 81] [Impact Index Per Article: 20.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2018] [Revised: 03/01/2020] [Accepted: 03/02/2020] [Indexed: 02/06/2023]
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Rossini PM, Miraglia F, Alù F, Cotelli M, Ferreri F, Di Iorio R, Iodice F, Vecchio F. Neurophysiological Hallmarks of Neurodegenerative Cognitive Decline: The Study of Brain Connectivity as A Biomarker of Early Dementia. J Pers Med 2020; 10:E34. [PMID: 32365890 PMCID: PMC7354555 DOI: 10.3390/jpm10020034] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Revised: 04/26/2020] [Accepted: 04/27/2020] [Indexed: 02/07/2023] Open
Abstract
Neurodegenerative processes of various types of dementia start years before symptoms, but the presence of a "neural reserve", which continuously feeds and supports neuroplastic mechanisms, helps the aging brain to preserve most of its functions within the "normality" frame. Mild cognitive impairment (MCI) is an intermediate stage between dementia and normal brain aging. About 50% of MCI subjects are already in a stage that is prodromal-to-dementia and during the following 3 to 5 years will develop clinically evident symptoms, while the other 50% remains at MCI or returns to normal. If the risk factors favoring degenerative mechanisms are modified during early stages (i.e., in the prodromal), the degenerative process and the loss of abilities in daily living activities will be delayed. It is therefore extremely important to have biomarkers able to identify-in association with neuropsychological tests-prodromal-to-dementia MCI subjects as early as possible. MCI is a large (i.e., several million in EU) and substantially healthy population; therefore, biomarkers should be financially affordable, largely available and non-invasive, but still accurate in their diagnostic prediction. Neurodegeneration initially affects synaptic transmission and brain connectivity; methods exploring them would represent a 1st line screening. Neurophysiological techniques able to evaluate mechanisms of synaptic function and brain connectivity are attracting general interest and are described here. Results are quite encouraging and suggest that by the application of artificial intelligence (i.e., learning-machine), neurophysiological techniques represent valid biomarkers for screening campaigns of the MCI population.
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Affiliation(s)
- Paolo Maria Rossini
- Brain Connectivity Laboratory, Department of Neuroscience & Neurorehabilitation, IRCCS San Raffaele Pisana, 00167 Rome, Italy; (F.M.); (F.A.); (F.I.); (F.V.)
| | - Francesca Miraglia
- Brain Connectivity Laboratory, Department of Neuroscience & Neurorehabilitation, IRCCS San Raffaele Pisana, 00167 Rome, Italy; (F.M.); (F.A.); (F.I.); (F.V.)
| | - Francesca Alù
- Brain Connectivity Laboratory, Department of Neuroscience & Neurorehabilitation, IRCCS San Raffaele Pisana, 00167 Rome, Italy; (F.M.); (F.A.); (F.I.); (F.V.)
| | - Maria Cotelli
- Neuropsychology Unit, IRCCS Istituto Centro San Giovanni di DioFatebenefratelli, 25125 Brescia, Italy;
| | - Florinda Ferreri
- Department of Neuroscience, Unit of Neurology and Neurophysiology, University of Padua, 35100 Padua, Italy;
- Department of Clinical Neurophysiology, Kuopio University Hospital, University of Eastern Finland, 70100 Kuopio, Finland
| | - Riccardo Di Iorio
- Neurology Unit, IRCCS Polyclinic A. Gemelli Foundation, 00168 Rome, Italy;
| | - Francesco Iodice
- Brain Connectivity Laboratory, Department of Neuroscience & Neurorehabilitation, IRCCS San Raffaele Pisana, 00167 Rome, Italy; (F.M.); (F.A.); (F.I.); (F.V.)
- Neurology Unit, IRCCS Polyclinic A. Gemelli Foundation, 00168 Rome, Italy;
| | - Fabrizio Vecchio
- Brain Connectivity Laboratory, Department of Neuroscience & Neurorehabilitation, IRCCS San Raffaele Pisana, 00167 Rome, Italy; (F.M.); (F.A.); (F.I.); (F.V.)
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20
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Cassani R, Falk TH. Alzheimer's Disease Diagnosis and Severity Level Detection Based on Electroencephalography Modulation Spectral "Patch" Features. IEEE J Biomed Health Inform 2019; 24:1982-1993. [PMID: 31725401 DOI: 10.1109/jbhi.2019.2953475] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Over the last two decades, electroencephalography (EEG) has emerged as a reliable tool for the diagnosis of cortical disorders such as Alzheimer's disease (AD). Typically, resting-state EEG (rsEEG) signals have been used, and traditional frequency bands (delta, theta, alpha, beta and gamma) have been explored. Recent studies, however, have suggested that non-conventional bands may lead to improved diagnostic performance. In this work, we propose a new type of features derived from the 2-dimensional modulation spectral domain representation of the rsEEG signal in order to characterize the neuromodulatory deficit emergent with AD. The proposed features are computed as the power in specific "patches" or regions of interest in the power modulation spectrogram, which are shown to be highly discriminant of AD severity levels. The proposed features were compared with traditional features used in the rsEEG AD monitoring literature. Results showed the proposed features not only achieving improved performance at discriminating between healthy normal elderly controls (Nold) and AD patients with varying severity levels, but also at monitoring severity levels (i.e., mild AD versus moderate AD). Moreover, the proposed features were shown to outperform traditional rsEEG features. Finally, we validated the biological origin of the proposed features by using source localization and comparing the obtained results with ones reported in the AD literature.
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21
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Mulligan BP, Smart CM, Segalowitz SJ. Neuropsychological and resting-state electroencephalographic markers of older adult neurocognitive adaptability. Clin Neuropsychol 2019; 33:390-418. [PMID: 30648474 DOI: 10.1080/13854046.2018.1543453] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
OBJECTIVE This study was undertaken to explore multimethod neurocognitive screening tools to aid in detection of older adults who may be at heightened risk of pathological cognitive decline (preclinical dementia). In so doing, this study advances the theoretical conceptualization of neurocognitive adaptability in the context of aging and dementia. METHOD This article reports original data from the baseline measurement occasion of a longitudinal study of healthy, community-dwelling older adults from the Victoria, British Columbia region. Participants were diagnosed as normal, subtle decline, or mild cognitive impairment according to actuarial neuropsychological criteria (adjusted for age only or adjusted for age and premorbid IQ). Diagnostic classification was employed to illustrate group differences in a novel metric of multi-timescale neural adaptability derived from 4-min of resting-state electroencephalographic data collected from each participant (immediately following their neuropsychological evaluation). RESULTS Prior findings were replicated; adjusting raw neuropsychological test scores for individual differences in estimated premorbid IQ appeared to increase the sensitivity of standardized clinical tasks to subtle cognitive impairment. Moreover, and consistent with prior neuroscientific research, timescale-specific (i.e. at ∼12-20 ms timescales) differences in resting-state neural adaptability appeared to characterize groups who differed in terms of neuropsycholgoical diagnostic classification. CONCLUSIONS Recently proposed actuarial neuropsychological criteria for subtle cognitive decline identify older adults who show timescale-specific changes in resting brain function that may signal the onset of preclinical dementia. The subtle decline stage may represent a critical inflection point-partial loss of neurocognitive adaptability-on a pathological aging trajectory. These findings illustrate areas of potential future development in neurocognitive health care.
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Affiliation(s)
- Bryce P Mulligan
- a Department of Psychology , The Ottawa Hospital , Ottawa , Canada.,b Department of Psychology , University of Victoria , Victoria , Canada.,c Institute on Aging & Lifelong Health , University of Victoria , Victoria , Canada
| | - Colette M Smart
- b Department of Psychology , University of Victoria , Victoria , Canada.,c Institute on Aging & Lifelong Health , University of Victoria , Victoria , Canada
| | - Sidney J Segalowitz
- d Psychology Department , Brock University , St. Catharines , Canada.,e The Jack and Nora Walker Centre for Lifespan Development Research , Brock University , St. Catharines , Canada
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22
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Cassani R, Estarellas M, San-Martin R, Fraga FJ, Falk TH. Systematic Review on Resting-State EEG for Alzheimer's Disease Diagnosis and Progression Assessment. DISEASE MARKERS 2018; 2018:5174815. [PMID: 30405860 PMCID: PMC6200063 DOI: 10.1155/2018/5174815] [Citation(s) in RCA: 147] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/20/2018] [Revised: 07/12/2018] [Accepted: 07/29/2018] [Indexed: 12/17/2022]
Abstract
Alzheimer's disease (AD) is a neurodegenerative disorder that accounts for nearly 70% of the more than 46 million dementia cases estimated worldwide. Although there is no cure for AD, early diagnosis and an accurate characterization of the disease progression can improve the quality of life of AD patients and their caregivers. Currently, AD diagnosis is carried out using standardized mental status examinations, which are commonly assisted by expensive neuroimaging scans and invasive laboratory tests, thus rendering the diagnosis time consuming and costly. Notwithstanding, over the last decade, electroencephalography (EEG) has emerged as a noninvasive alternative technique for the study of AD, competing with more expensive neuroimaging tools, such as MRI and PET. This paper reports on the results of a systematic review on the utilization of resting-state EEG signals for AD diagnosis and progression assessment. Recent journal articles obtained from four major bibliographic databases were analyzed. A total of 112 journal articles published from January 2010 to February 2018 were meticulously reviewed, and relevant aspects of these papers were compared across articles to provide a general overview of the research on this noninvasive AD diagnosis technique. Finally, recommendations for future studies with resting-state EEG were presented to improve and facilitate the knowledge transfer among research groups.
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Affiliation(s)
- Raymundo Cassani
- Institut national de la recherche scientifique (INRS-EMT), University of Québec, Montreal, Canada
| | - Mar Estarellas
- Institut national de la recherche scientifique (INRS-EMT), University of Québec, Montreal, Canada
- Department of Bioengineering, Imperial College London, London, UK
| | - Rodrigo San-Martin
- Center for Mathematics, Computation and Cognition, Universidade Federal do ABC, São Bernardo do Campo, Brazil
| | - Francisco J. Fraga
- Engineering, Modeling and Applied Social Sciences Center, Universidade Federal do ABC, São Bernardo do Campo, Brazil
| | - Tiago H. Falk
- Institut national de la recherche scientifique (INRS-EMT), University of Québec, Montreal, Canada
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Cui D, Qi S, Gu G, Li X, Li Z, Wang L, Yin S. Magnitude Squared Coherence Method based on Weighted Canonical Correlation Analysis for EEG Synchronization Analysis in Amnesic Mild Cognitive Impairment of Diabetes Mellitus. IEEE Trans Neural Syst Rehabil Eng 2018; 26:1908-1917. [DOI: 10.1109/tnsre.2018.2862396] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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24
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Fraga FJ, Mamani GQ, Johns E, Tavares G, Falk TH, Phillips NA. Early diagnosis of mild cognitive impairment and Alzheimer's with event-related potentials and event-related desynchronization in N-back working memory tasks. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2018; 164:1-13. [PMID: 30195417 DOI: 10.1016/j.cmpb.2018.06.011] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2018] [Revised: 05/24/2018] [Accepted: 06/14/2018] [Indexed: 06/08/2023]
Abstract
BACKGROUND AND OBJECTIVE In this study we investigate whether or not event-related potentials (ERP) and/or event-related (de)synchronization (ERD/ERS) can be used to differentiate between 27 healthy elderly (HE), 21 subjects diagnosed with mild cognitive impairment (MCI) and 15 mild Alzheimer's disease (AD) patients. METHODS Using 32-channel EEG recordings, we measured ERP responses to a three-level (N-back, N = 0,1,2) visual working memory task. We also performed ERD analysis over the same EEG data, dividing the full-band signal into the well-known delta, theta, alpha, beta and gamma bands. Both ERP and ERD analyses were followed by cluster analysis with correction for multicomparisons whenever significant differences were found between groups. RESULTS Regarding ERP (full-band analysis), our findings have shown both patient groups (MCI and AD) with reduced P450 amplitude (compared to HE controls) in the execution of the non-match 1-back task at many scalp electrodes, chiefly at parietal and centro-parietal areas. However, no significant differences were found between MCI and AD in ERP analysis whatever was the task. As for sub-band analyses, ERD/ERS measures revealed that HE subjects elicited consistently greater alpha ERD responses than MCI and AD patients during the 1-back task in the match condition, with all differences located at frontal, central and occipital regions. Moreover, in the non-match condition, it was possible to distinguish between MCI and AD patients when they were performing the 0-back task, with MCI presenting more desynchronization than AD on the theta band at temporal and fronto-temporal areas. In summary, ERD analyses have revealed themselves more valuable than ERP, since they showed significant differences in all three group comparisons: HE vs. MCI, HE vs. AD, and MCI vs. AD. CONCLUSIONS Based on these findings, we conclude that ERD responses to working memory (N-back) tasks could be useful not only for early MCI diagnosis or for improved AD diagnosis, but probably also for assessing the likelihood of MCI progression to AD, after further validated by a longitudinal study.
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Affiliation(s)
- Francisco J Fraga
- Engineering, Modelling and Applied Social Sciences Center, Universidade Federal do ABC, Santo André, São Paulo, Brazil.
| | - Godofredo Quispe Mamani
- Engineering, Modelling and Applied Social Sciences Center, Universidade Federal do ABC, Santo André, São Paulo, Brazil; Departamento de Estadística, Universidad Nacional del Altiplano, Puno, Peru
| | - Erin Johns
- Department of Psychology, Concordia University, Montreal, Quebec, Canada
| | - Guilherme Tavares
- Engineering, Modelling and Applied Social Sciences Center, Universidade Federal do ABC, Santo André, São Paulo, Brazil
| | - Tiago H Falk
- Institut National de la Recherche Scientifique (INRS-EMT), University of Quebec, Montreal, Quebec, Canada
| | - Natalie A Phillips
- Department of Psychology, Concordia University, Montreal, Quebec, Canada
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Sebek J, Bortel R, Sovka P. Suppression of overlearning in independent component analysis used for removal of muscular artifacts from electroencephalographic records. PLoS One 2018; 13:e0201900. [PMID: 30106969 PMCID: PMC6091961 DOI: 10.1371/journal.pone.0201900] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Accepted: 07/24/2018] [Indexed: 11/18/2022] Open
Abstract
This paper addresses the overlearning problem in the independent component analysis (ICA) used for the removal of muscular artifacts from electroencephalographic (EEG) records. We note that for short EEG records with high number of channels the ICA fails to separate artifact-free EEG and muscular artifacts, which has been previously attributed to the phenomenon called overlearning. We address this problem by projecting an EEG record into several subspaces with a lower dimension, and perform the ICA on each subspace separately. Due to a reduced dimension of the subspaces, the overlearning is suppressed, and muscular artifacts are better separated. Once the muscular artifacts are removed, the signals in the individual subspaces are combined to provide an artifact free EEG record. We show that for short signals and high number of EEG channels our approach outperforms the currently available ICA based algorithms for muscular artifact removal. The proposed technique can efficiently suppress ICA overlearning for short signal segments of high density EEG signals.
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Affiliation(s)
- Jan Sebek
- Dept. of Circuit Theory, Czech Technical University, Faculty of Electrical Engineering, Prague, Czech Republic
- * E-mail:
| | - Radoslav Bortel
- Dept. of Circuit Theory, Czech Technical University, Faculty of Electrical Engineering, Prague, Czech Republic
| | - Pavel Sovka
- Dept. of Circuit Theory, Czech Technical University, Faculty of Electrical Engineering, Prague, Czech Republic
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Anastasiadou MN, Christodoulakis M, Papathanasiou ES, Papacostas SS, Mitsis GD. Unsupervised detection and removal of muscle artifacts from scalp EEG recordings using canonical correlation analysis, wavelets and random forests. Clin Neurophysiol 2017; 128:1755-1769. [PMID: 28778057 DOI: 10.1016/j.clinph.2017.06.247] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2016] [Revised: 05/19/2017] [Accepted: 06/20/2017] [Indexed: 11/15/2022]
Abstract
OBJECTIVE This paper proposes supervised and unsupervised algorithms for automatic muscle artifact detection and removal from long-term EEG recordings, which combine canonical correlation analysis (CCA) and wavelets with random forests (RF). METHODS The proposed algorithms first perform CCA and continuous wavelet transform of the canonical components to generate a number of features which include component autocorrelation values and wavelet coefficient magnitude values. A subset of the most important features is subsequently selected using RF and labelled observations (supervised case) or synthetic data constructed from the original observations (unsupervised case). The proposed algorithms are evaluated using realistic simulation data as well as 30min epochs of non-invasive EEG recordings obtained from ten patients with epilepsy. RESULTS We assessed the performance of the proposed algorithms using classification performance and goodness-of-fit values for noisy and noise-free signal windows. In the simulation study, where the ground truth was known, the proposed algorithms yielded almost perfect performance. In the case of experimental data, where expert marking was performed, the results suggest that both the supervised and unsupervised algorithm versions were able to remove artifacts without affecting noise-free channels considerably, outperforming standard CCA, independent component analysis (ICA) and Lagged Auto-Mutual Information Clustering (LAMIC). CONCLUSION The proposed algorithms achieved excellent performance for both simulation and experimental data. Importantly, for the first time to our knowledge, we were able to perform entirely unsupervised artifact removal, i.e. without using already marked noisy data segments, achieving performance that is comparable to the supervised case. SIGNIFICANCE Overall, the results suggest that the proposed algorithms yield significant future potential for improving EEG signal quality in research or clinical settings without the need for marking by expert neurophysiologists, EMG signal recording and user visual inspection.
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Affiliation(s)
- Maria N Anastasiadou
- McGill University, Department of Bioengineering, 817 Sherbrooke St. W., Macdonald Engineering Building, Room 270, Montreal, QC H3A 0C3, Canada
| | - Manolis Christodoulakis
- McGill University, Department of Bioengineering, 817 Sherbrooke St. W., Macdonald Engineering Building, Room 270, Montreal, QC H3A 0C3, Canada
| | - Eleftherios S Papathanasiou
- McGill University, Department of Bioengineering, 817 Sherbrooke St. W., Macdonald Engineering Building, Room 270, Montreal, QC H3A 0C3, Canada
| | - Savvas S Papacostas
- McGill University, Department of Bioengineering, 817 Sherbrooke St. W., Macdonald Engineering Building, Room 270, Montreal, QC H3A 0C3, Canada
| | - Georgios D Mitsis
- McGill University, Department of Bioengineering, 817 Sherbrooke St. W., Macdonald Engineering Building, Room 270, Montreal, QC H3A 0C3, Canada.
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Gupta M, Beckett SA, Klerman EB. On-line EEG Denoising and Cleaning Using Correlated Sparse Recovery and Active Learning. INTERNATIONAL JOURNAL OF WIRELESS INFORMATION NETWORKS 2017; 24:109-123. [PMID: 29983539 PMCID: PMC6035011 DOI: 10.1007/s10776-017-0346-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2016] [Accepted: 02/24/2017] [Indexed: 06/08/2023]
Abstract
We have developed two new methods that use sparse recovery and active learning techniques for near real-time artifact identification and removal in EEG recordings. The first algorithm, called Correlated Sparse Signal Recovery (CSSR) addresses the problem of structured sparse signal recovery when statistical rather than exact properties describing the structure of the signal are appropriate, as in the elimination of eye movement artifacts; such tasks cannot be done efficiently using structured models that assume a common sparsity profile of fixed groups of components. Our algorithm learns structured sparse coefficients in a Bayesian paradigm. Using it, we have successfully identified and subtracted eye movement (structured) artifacts in real EEG recordings resulting in minimal data loss. Our method outperforms ICA and standard sparse recovery algorithms by preserving both spectral and complexity properties of the denoised EEG. Our second method uses a new active selection algorithm that we call Output-based Active Selection (OAS). When applied to the task of detection of EEG epochs containing other non-structured artifacts from an ensemble of detectors, OAS boosts accuracy of the ensemble from 91% to 97.5% with only 10% active labels. Our methods can also be applied to real-time artifact removal in magnetoencephalography (MEG) and blood pressure signals.
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Cassani R, Falk TH, Fraga FJ, Cecchi M, Moore DK, Anghinah R. Towards automated electroencephalography-based Alzheimer’s disease diagnosis using portable low-density devices. Biomed Signal Process Control 2017. [DOI: 10.1016/j.bspc.2016.12.009] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Kanda PAM, Oliveira EF, Fraga FJ. EEG epochs with less alpha rhythm improve discrimination of mild Alzheimer's. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2017; 138:13-22. [PMID: 27886711 DOI: 10.1016/j.cmpb.2016.09.023] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2016] [Revised: 09/01/2016] [Accepted: 09/23/2016] [Indexed: 06/06/2023]
Abstract
BACKGROUND AND OBJECTIVE Eyes-closed-awake electroencephalogram (EEG) is a useful tool in the diagnosis of Alzheimer's. However, there is eyes-closed-awake EEG with dominant or rare alpha rhythm. In this paper, we show that random selection of EEG epochs disregarding the alpha rhythm will lead to bias concerning EEG-based Alzheimer's Disease diagnosis. METHODS We compared EEG epochs with more than 30% and with less than 30% alpha rhythm of mild Alzheimer's Disease patients and healthy elderly. We classified epochs as dominant alpha scenario and rare alpha scenario according to alpha rhythm (8-13 Hz) percentage in O1, O2 and Oz channels. Accordingly, we divided the probands into four groups: 17 dominant alpha scenario controls, 15 mild Alzheimer's patients with dominant alpha scenario epochs, 12 rare alpha scenario healthy elderly and 15 mild Alzheimer's Disease patients with rare alpha scenario epochs. We looked for group differences using one-way ANOVA tests followed by post-hoc multiple comparisons (p < 0.05) over normalized energy values (%) on the other four well-known frequency bands (delta, theta, beta and gamma) using two different electrode configurations (parieto-occipital and central). RESULTS After carrying out post-hoc multiple comparisons, for both electrode configurations we found significant differences between mild Alzheimer's patients and healthy elderly on beta- and theta-energy (%) only for the rare alpha scenario. No differences were found for the dominant alpha scenario in any of the five frequency bands. CONCLUSIONS This is the first study of Alzheimer's awake-EEG reporting the influence of alpha rhythm on epoch selection, where our results revealed that, contrarily to what was most likely expected, less synchronized EEG epochs (rare alpha scenario) better discriminated mild Alzheimer's than those presenting abundant alpha (dominant alpha scenario). In addition, we find out that epoch selection is a very sensitive issue in qEEG research. Consequently, for Alzheimer's studies dealing with resting state EEG, we propose that epoch selection strategies should always be cautiously designed and thoroughly explained.
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Affiliation(s)
| | - Eliezyer F Oliveira
- CECS - Engineering, Modelling and Applied Social Sciences Center, UFABC - Universidade Federal do ABC, Santo André, SP, Brazil
| | - Francisco J Fraga
- CECS - Engineering, Modelling and Applied Social Sciences Center, UFABC - Universidade Federal do ABC, Santo André, SP, Brazil.
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Islam MK, Rastegarnia A, Yang Z. Methods for artifact detection and removal from scalp EEG: A review. Neurophysiol Clin 2016; 46:287-305. [PMID: 27751622 DOI: 10.1016/j.neucli.2016.07.002] [Citation(s) in RCA: 156] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2016] [Revised: 05/29/2016] [Accepted: 07/07/2016] [Indexed: 11/29/2022] Open
Abstract
Electroencephalography (EEG) is the most popular brain activity recording technique used in wide range of applications. One of the commonly faced problems in EEG recordings is the presence of artifacts that come from sources other than brain and contaminate the acquired signals significantly. Therefore, much research over the past 15 years has focused on identifying ways for handling such artifacts in the preprocessing stage. However, this is still an active area of research as no single existing artifact detection/removal method is complete or universal. This article presents an extensive review of the existing state-of-the-art artifact detection and removal methods from scalp EEG for all potential EEG-based applications and analyses the pros and cons of each method. First, a general overview of the different artifact types that are found in scalp EEG and their effect on particular applications are presented. In addition, the methods are compared based on their ability to remove certain types of artifacts and their suitability in relevant applications (only functional comparison is provided not performance evaluation of methods). Finally, the future direction and expected challenges of current research is discussed. Therefore, this review is expected to be helpful for interested researchers who will develop and/or apply artifact handling algorithm/technique in future for their applications as well as for those willing to improve the existing algorithms or propose a new solution in this particular area of research.
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Affiliation(s)
- Md Kafiul Islam
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore
| | - Amir Rastegarnia
- Department of Electrical Engineering, University of Malayer, Malayer, Iran.
| | - Zhi Yang
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore
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31
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Spectral entropy feature subset selection using SEPCOR to detect alcoholic impact on gamma sub band visual event related potentials of multichannel electroencephalograms (EEG). Appl Soft Comput 2016. [DOI: 10.1016/j.asoc.2016.04.041] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Cui D, Pu W, Liu J, Bian Z, Li Q, Wang L, Gu G. A new EEG synchronization strength analysis method: S-estimator based normalized weighted-permutation mutual information. Neural Netw 2016; 82:30-8. [PMID: 27451314 DOI: 10.1016/j.neunet.2016.06.004] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2015] [Revised: 06/17/2016] [Accepted: 06/21/2016] [Indexed: 12/20/2022]
Abstract
Synchronization is an important mechanism for understanding information processing in normal or abnormal brains. In this paper, we propose a new method called normalized weighted-permutation mutual information (NWPMI) for double variable signal synchronization analysis and combine NWPMI with S-estimator measure to generate a new method named S-estimator based normalized weighted-permutation mutual information (SNWPMI) for analyzing multi-channel electroencephalographic (EEG) synchronization strength. The performances including the effects of time delay, embedding dimension, coupling coefficients, signal to noise ratios (SNRs) and data length of the NWPMI are evaluated by using Coupled Henon mapping model. The results show that the NWPMI is superior in describing the synchronization compared with the normalized permutation mutual information (NPMI). Furthermore, the proposed SNWPMI method is applied to analyze scalp EEG data from 26 amnestic mild cognitive impairment (aMCI) subjects and 20 age-matched controls with normal cognitive function, who both suffer from type 2 diabetes mellitus (T2DM). The proposed methods NWPMI and SNWPMI are suggested to be an effective index to estimate the synchronization strength.
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Affiliation(s)
- Dong Cui
- School of Information Science and Engineering, Yanshan University, Qinhuangdao, China
| | - Weiting Pu
- School of Information Science and Engineering, Yanshan University, Qinhuangdao, China
| | - Jing Liu
- School of Information Science and Engineering, Yanshan University, Qinhuangdao, China
| | - Zhijie Bian
- Department of Neurology, The Rocket Force General Hospital of PLA, Beijing, China
| | - Qiuli Li
- Department of Neurology, The Rocket Force General Hospital of PLA, Beijing, China
| | - Lei Wang
- Department of Neurology, The Rocket Force General Hospital of PLA, Beijing, China
| | - Guanghua Gu
- School of Information Science and Engineering, Yanshan University, Qinhuangdao, China.
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Banville H, Falk T. Recent advances and open challenges in hybrid brain-computer interfacing: a technological review of non-invasive human research. BRAIN-COMPUTER INTERFACES 2016. [DOI: 10.1080/2326263x.2015.1134958] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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34
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van Diessen E, Numan T, van Dellen E, van der Kooi AW, Boersma M, Hofman D, van Lutterveld R, van Dijk BW, van Straaten ECW, Hillebrand A, Stam CJ. Opportunities and methodological challenges in EEG and MEG resting state functional brain network research. Clin Neurophysiol 2015; 126:1468-81. [PMID: 25511636 DOI: 10.1016/j.clinph.2014.11.018] [Citation(s) in RCA: 249] [Impact Index Per Article: 27.7] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2014] [Revised: 10/30/2014] [Accepted: 11/20/2014] [Indexed: 12/17/2022]
Affiliation(s)
- E van Diessen
- Department of Pediatric Neurology, Brain Center Rudolf Magnus, University Medical Center Utrecht, The Netherlands.
| | - T Numan
- Department of Intensive Care, University Medical Center Utrecht, The Netherlands
| | - E van Dellen
- Department of Psychiatry, Brain Center Rudolf Magnus, University Medical Center Utrecht, The Netherlands; Department of Clinical Neurophysiology and MEG Center, VU University Medical Center, Amsterdam, The Netherlands
| | - A W van der Kooi
- Department of Intensive Care, University Medical Center Utrecht, The Netherlands
| | - M Boersma
- Department of Experimental Psychology, Utrecht University, The Netherlands
| | - D Hofman
- Department of Experimental Psychology, Utrecht University, The Netherlands
| | - R van Lutterveld
- Center for Mindfulness, University of Massachusetts School of Medicine, Worcester, Massachusetts, USA
| | - B W van Dijk
- Department of Clinical Neurophysiology and MEG Center, VU University Medical Center, Amsterdam, The Netherlands
| | - E C W van Straaten
- Department of Clinical Neurophysiology and MEG Center, VU University Medical Center, Amsterdam, The Netherlands
| | - A Hillebrand
- Department of Clinical Neurophysiology and MEG Center, VU University Medical Center, Amsterdam, The Netherlands
| | - C J Stam
- Department of Clinical Neurophysiology and MEG Center, VU University Medical Center, Amsterdam, The Netherlands
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