PCDH19-Related Epilepsy in Early Onset of Chinese Male Patient: Case Report and Literature Review

A Case Report of Parental Germline Mosaicism in the PCDH19 Gene of Two Iranian Siblings

Introduction

Developmental and epileptic encephalopathy 9 (DEE9) is caused by pathogenic variants in the PCDH19 gene. The clinical features include early-onset seizures that are often provoked by fever and display clustered seizures, mild to profound intellectual disability, autistic traits, and behavioral disturbances. DEE9 is characterized by an unusual X-linked pattern where heterozygous females or rarely mosaic hemizygous males are affected, but hemizygous males and homozygous females are asymptomatic. In recent years, an increasing number of female and male patients with PCDH19-related epilepsy and symptoms have been reported.

Methods

Here, we report two additional female patients with DEE9 who are siblings. After analyzing karyotype testing results, whole-exome sequencing (WES) was performed for the proband. Then, Sanger sequencing was carried out for proband, her affected sister, and parents.

Results

Sequencing results revealed that our two patients had a heterozygous frameshift variant (NM_001184880.2: c.1091delC, p.P364Rfs*4) in the PCDH19 gene. We also reviewed previously reported cases with this mutation in detail.

Conclusion

This is the first report of germline mosaicism in the PCDH19 gene in the Iranian population and expanded the phenotypic spectrum of DEE9. Genetic testing has become an effective way of determining the diagnosis. Parental germline mosaicism should be considered when providing genetic counseling for X-linked/autosomal dominant disorders. This report also emphasizes the importance of considering prenatal diagnosis (PND) in such cases.

PCDH19-related epilepsy in mosaic males: The phenotypic implication of genotype and variant allele frequency

OBJECTIVE

To analyze the genotypes and phenotypes of mosaic male patients with PCDH19-related epilepsy (PCDH19-RE) and explore the correlation between genotype, variant allele frequency (VAF), and phenotypic severity.

METHODS

Clinical data and peripheral blood samples of 11 male mosaic patients were collected and analyzed in our study. The VAF of the PCDH19 gene from peripheral blood was quantified using amplicon-based deep sequencing. Additional 20 mosaic male patients with PCDH19-RE were collected from the published literature, with 10 patients whose VAFs of the PCDH19 gene were available for analytic purposes.

RESULTS

In our cohort of 11 patients, 10 variants were identified, and four were novel. The VAF of the PCDH19 gene from peripheral blood ranged from 27 to 90%. The median seizure onset age was 6 months (range: 4-9 months). Clinical manifestations included cluster seizures (100%), fever sensitivity (73%), focal seizures (91%), developmental delay/intellectual disability (DD/ID, 82%), and autistic features (45%). Thirty-one mosaic male patients collected from our cohort and the literature developed seizures mostly (87%) within one year of age. Variant types included missense variants (42%), truncating variants (52%), splice variants (3%), and whole PCDH19 deletion (3%). Among 21 patients with a definite VAF from our cohort and the literature, nine had a low VAF ( ≤ 50%) and 12 had a high VAF (> 50%). Seventy-five percent of variants from the high VAF group were missense, whereas 89% of those from the low VAF group were truncations. The median seizure onset age was 6 months in the low VAF group and 9 months in the high VAF group (p = 0.018). Forty-four percent (4/9) of patients from the low VAF group achieved seizure-free for ≥1 year, whereas none of the 12 patients from the high VAF group did (p = 0.021). DD/ID was present in 83% (10/12) of the high VAF group and 56% (5/9) of the low VAF group (p = 0.331).

CONCLUSION

The predominant variant types were truncating and missense variants. Missense variants tended to have higher VAFs. Patients with a high VAF were more likely to have a more severe epileptic phenotype. Our findings shed light on the phenotypic implications of VAF in mosaic males with PCDH19-RE.