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Srikamwang C, onsa NE, Sunanta P, Sangta J, Chanway CP, Thanakkasaranee S, Sommano SR. Role of Microbial Volatile Organic Compounds in Promoting Plant Growth and Disease Resistance in Horticultural Production. PLANT SIGNALING & BEHAVIOR 2023; 18:2227440. [PMID: 37366146 PMCID: PMC10730190 DOI: 10.1080/15592324.2023.2227440] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Revised: 06/12/2023] [Accepted: 06/15/2023] [Indexed: 06/28/2023]
Abstract
Microbial volatile organic compounds (MVOCs) are a diverse group of volatile organic compounds that microorganisms may produce and release into the environment. These compounds have both positive and negative effects on plants, as they have been shown to be effective at mitigating stresses and functioning as immune stimulants. Furthermore, MVOCs modulate plant growth and systemic plant resistance, while also serving as attractants or repellents for insects and other stressors that pose threats to plants. Considering the economic value of strawberries as one of the most popular and consumed fruits worldwide, harnessing the benefits of MVOCs becomes particularly significant. MVOCs offer cost-effective and efficient solutions for disease control and pest management in horticultural production, as they can be utilized at low concentrations. This paper provides a comprehensive review of the current knowledge on microorganisms that contribute to the production of beneficial volatile organic compounds for enhancing disease resistance in fruit products, with a specific emphasis on broad horticultural production. The review also identifies research gaps and highlights the functions of MVOCs in horticulture, along with the different types of MVOCs that impact plant disease resistance in strawberry production. By offering a novel perspective on the application and utilization of volatile organic compounds in sustainable horticulture, this review presents an innovative approach to maximizing the efficiency of horticultural production through the use of natural products.
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Affiliation(s)
- Chonlada Srikamwang
- Plant Bioactive Compound Laboratory, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
- Interdisciplinary Program in Biotechnology, Graduate School, Chiang Mai University, Chiang Mai, Thailand
| | - Nuttacha Eva onsa
- Plant Bioactive Compound Laboratory, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
- Department of Plant and Soil Science, Chiang Mai University, Chiang Mai, Thailand
| | - Piyachat Sunanta
- Department of Plant and Soil Science, Chiang Mai University, Chiang Mai, Thailand
- Postharvest Technology Research Center, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
| | - Jiraporn Sangta
- Plant Bioactive Compound Laboratory, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
- Interdisciplinary Program in Biotechnology, Graduate School, Chiang Mai University, Chiang Mai, Thailand
| | - Christopher P. Chanway
- Department of Forest and Conservation Sciences, Faculty of Forestry, University of British Columbia, Vancouver, Canada
| | - Sarinthip Thanakkasaranee
- Division of Packaging Technology, School of Agro-Industry, Faculty of Agro Industry, Chiang Mai University, Chiang Mai, Thailand
- Center of Excellence in Materials Science and Technology, Chiang Mai University, Chiang Mai, Thailand
- Center of Excellence in Agro Bio-Circular-Green Industry (Agro BCG), Chiang Mai University, Chiang Mai, Thailand
| | - Sarana Rose Sommano
- Plant Bioactive Compound Laboratory, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
- Department of Plant and Soil Science, Chiang Mai University, Chiang Mai, Thailand
- Center of Excellence in Agro Bio-Circular-Green Industry (Agro BCG), Chiang Mai University, Chiang Mai, Thailand
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Hussain A, Farooq M, Naqvi RZ, Aslam MQ, Siddiqui HA, Amin I, Liu C, Liu X, Scheffler J, Asif M, Mansoor S. Whole-Genome Resequencing Deciphers New Insight Into Genetic Diversity and Signatures of Resistance in Cultivated Cotton Gossypium hirsutum. Mol Biotechnol 2023; 65:34-51. [PMID: 35778659 DOI: 10.1007/s12033-022-00527-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2022] [Accepted: 06/07/2022] [Indexed: 01/11/2023]
Abstract
Cotton is an important crop that produces fiber and cottonseed oil for the textile and oil industry. However, cotton leaf curl virus disease (CLCuD) stress is limiting its yield in several Asian countries. In this study, we have sequenced Mac7 accession, a Gossypium hirsutum resistance source against several biotic stresses. By aligning with the Gossypium hirsutum (AD1) 'TM-1' genome, a total of 4.7 and 1.2 million SNPs and InDels were identified in the Mac7 genome. The gene ontology and metabolic pathway enrichment indicated SNPs and InDels role in nucleotide bindings, secondary metabolite synthesis, and plant-pathogen interaction pathways. Furthermore, the RNA-seq data in different tissues and qPCR expression profiling under CLCuD provided individual gene roles in resistant and susceptible accessions. Interestingly, the differential NLR genes demonstrated higher expression in resistant plants rather than in susceptible plants expression. The current resequencing results may provide primary data to identify DNA resistance markers which will be helpful in marker-assisted breeding for development of Mac7-derived resistance lines.
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Affiliation(s)
- Athar Hussain
- National Institute for Biotechnology and Genetic Engineering (NIBGE), College of Pakistan Institute of Engineering and Applied Sciences (PIEAS), Faisalabad, Pakistan
| | - Muhammad Farooq
- National Institute for Biotechnology and Genetic Engineering (NIBGE), College of Pakistan Institute of Engineering and Applied Sciences (PIEAS), Faisalabad, Pakistan.,Bioinformatics Group, Wageningen University & Research (WUR), Wageningen, Netherlands
| | - Rubab Zahra Naqvi
- National Institute for Biotechnology and Genetic Engineering (NIBGE), College of Pakistan Institute of Engineering and Applied Sciences (PIEAS), Faisalabad, Pakistan
| | - Muhammad Qasim Aslam
- National Institute for Biotechnology and Genetic Engineering (NIBGE), College of Pakistan Institute of Engineering and Applied Sciences (PIEAS), Faisalabad, Pakistan
| | - Hamid Anees Siddiqui
- National Institute for Biotechnology and Genetic Engineering (NIBGE), College of Pakistan Institute of Engineering and Applied Sciences (PIEAS), Faisalabad, Pakistan
| | - Imran Amin
- National Institute for Biotechnology and Genetic Engineering (NIBGE), College of Pakistan Institute of Engineering and Applied Sciences (PIEAS), Faisalabad, Pakistan
| | | | - Xin Liu
- Beijing Genomics Institute (BGI), Shenzhen, China
| | - Jodi Scheffler
- Genomics and Bioinformatics Research Unit, United States Department of Agriculture-Agricultural Research Service, USDA-ARS), 141 Experimental Station Road, Stoneville, MS, USA
| | - Muhammad Asif
- National Institute for Biotechnology and Genetic Engineering (NIBGE), College of Pakistan Institute of Engineering and Applied Sciences (PIEAS), Faisalabad, Pakistan
| | - Shahid Mansoor
- National Institute for Biotechnology and Genetic Engineering (NIBGE), College of Pakistan Institute of Engineering and Applied Sciences (PIEAS), Faisalabad, Pakistan.
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Herrera H, Sanhueza T, da Silva Valadares RB, Matus F, Pereira G, Atala C, Mora MDLL, Arriagada C. Diversity of Root-Associated Fungi of the Terrestrial Orchids Gavilea lutea and Chloraea collicensis in a Temperate Forest Soil of South-Central Chile. J Fungi (Basel) 2022; 8:jof8080794. [PMID: 36012784 PMCID: PMC9409917 DOI: 10.3390/jof8080794] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 07/18/2022] [Accepted: 07/23/2022] [Indexed: 11/16/2022] Open
Abstract
The diversity of orchid mycorrhizal fungi (OMF) and other beneficial root-associated fungi in temperate forests has scarcely been examined. This study aimed to analyze the diversity of mycorrhizal and rhizosphere-associated fungal communities in the terrestrial orchids Gavilea lutea and Chloraea collicensis growing in high-orchid-population-density areas in the piedmont of the Andes Cordillera with native forest (Nothofagus-Araucaria) and Coastal Cordillera with an exotic plantation (Pinus-Eucalyptus) in south-central Chile. We focused on rhizosphere-inhabiting and peloton-associated OMF in a native forest (Andes Cordillera) and a mixed forest (Coastal Cordillera). The native terrestrial orchids G. lutea and C. collicensis were localized, mycorrhizal root segments were taken to isolate peloton-associated OMF, and rhizosphere soil was taken to perform the metabarcoding approach. The results revealed that Basidiomycota and Ascomycota were the main rhizosphere-inhabiting fungal phyla, showing significant differences in the composition of fungal communities in both sites. Sebacina was the most-abundant OMF genera in the rhizosphere of G. lutea growing in the native forest soil. In contrast, Thanatephorus was the most abundant mycorrhizal taxa growing in the rhizosphere of orchids from the Coastal Cordillera. Besides, other OMF genera such as Inocybe, Tomentella, and Mycena were detected. The diversity of OMF in pelotons differed, being mainly related to Ceratobasidium sp. and Tulasnella sp. These results provide evidence of differences in OMF from pelotons and the rhizosphere soil in G. lutea growing in the Andes Cordillera and a selection of microbial communities in the rhizosphere of C. collicensis in the Coastal Cordillera. This raises questions about the efficiency of propagation strategies based only on mycorrhizal fungi obtained by culture-dependent methods, especially in orchids that depend on non-culturable taxa for seed germination and plantlet development.
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Affiliation(s)
- Héctor Herrera
- Laboratorio de Biorremediación, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Forestales, Universidad de La Frontera, Temuco 4780000, Chile;
- Correspondence: (H.H.); (C.A.)
| | - Tedy Sanhueza
- Laboratorio de Biorremediación, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Forestales, Universidad de La Frontera, Temuco 4780000, Chile;
- Programa de Magister en Manejo de Recursos Naturales, Universidad de La Frontera, Casilla 54-D, Francisco Salazar 01145, Temuco 4780000, Chile
| | | | - Francisco Matus
- Laboratory of Conservation and Dynamics of Volcanic Soils, Department of Chemical Sciences and Natural Resources, Universidad de La Frontera, Temuco 4780000, Chile;
- Network for Extreme Environmental Research (NEXER), Universidad de La Frontera, Temuco 4780000, Chile
| | - Guillermo Pereira
- Departamento de Ciencias y Tecnología Vegetal, Laboratorio Biotecnología de Hongos, Universidad de Concepción, Los Angeles 4440000, Chile;
| | - Cristian Atala
- Instituto de Biología, Facultad de Ciencias, Pontificia Universidad Católica de Valparaíso, Valparaiso 2340000, Chile;
| | - María de la Luz Mora
- Scientific and Technological Bioresource Nucleus, Universidad de La Frontera, Temuco 4780000, Chile;
| | - Cesar Arriagada
- Laboratorio de Biorremediación, Departamento de Ciencias Forestales, Facultad de Ciencias Agropecuarias y Forestales, Universidad de La Frontera, Temuco 4780000, Chile;
- Correspondence: (H.H.); (C.A.)
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Senthilkumar S, Vinod KK, Parthiban S, Thirugnanasambandam P, Lakshmi Pathy T, Banerjee N, Sarath Padmanabhan TS, Govindaraj P. Identification of potential MTAs and candidate genes for juice quality- and yield-related traits in Saccharum clones: a genome-wide association and comparative genomic study. Mol Genet Genomics 2022; 297:635-654. [PMID: 35257240 DOI: 10.1007/s00438-022-01870-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Accepted: 02/06/2022] [Indexed: 11/30/2022]
Abstract
Sugarcane is an economically important commercial crop which provides raw material for the production of sugar, jaggery, bioethanol, biomass and other by-products. Sugarcane breeding till today heavily relies on conventional breeding approaches which is time consuming, laborious and costly. Integration of marker-assisted selection (MAS) in sugarcane genetic improvement programs for difficult to select traits like sucrose content, resistance to pests and diseases and tolerance to abiotic stresses will accelerate varietal development. In the present study, association mapping approach was used to identify QTLs and genes associated with sucrose and other important yield-contributing traits. A mapping panel of 110 diverse sugarcane genotypes and 148 microsatellite primers were used for structured association mapping study. An optimal subpopulation number (ΔK) of 5 was identified by structure analysis. GWAS analysis using TASSEL identified a total of 110 MTAs which were localized into 27 QTLs by GLM and MLM (Q + K, PC + K) approaches. Among the 24 QTLs sequenced, 12 were able to identify potential candidate genes, viz., starch branching enzyme, starch synthase 4, sugar transporters and G3P-DH related to carbohydrate metabolism and hormone pathway-related genes ethylene insensitive 3-like 1, reversion to ethylene sensitive1-like, and auxin response factor associated to juice quality- and yield-related traits. Six markers, NKS 5_185, SCB 270_144, SCB 370_256, NKS 46_176 and UGSM 648_245, associated with juice quality traits and marker SMC31CUQ_304 associated with NMC were validated and identified as significantly associated to the traits by one-way ANOVA analysis. In conclusion, 24 potential QTLs identified in the present study could be used in sugarcane breeding programs after further validation in larger population. The candidate genes from carbohydrate and hormone response pathway presented in this study could be manipulated with genome editing approaches to further improve sugarcane crop.
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Affiliation(s)
- Shanmugavel Senthilkumar
- Division of Crop Improvement, ICAR-Sugarcane Breeding Institute, Coimbatore, Tamil Nadu, 641007, India
| | - K K Vinod
- Division of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Selvaraj Parthiban
- Division of Crop Improvement, ICAR-Sugarcane Breeding Institute, Coimbatore, Tamil Nadu, 641007, India
| | | | - Thalambedu Lakshmi Pathy
- Division of Crop Improvement, ICAR-Sugarcane Breeding Institute, Coimbatore, Tamil Nadu, 641007, India
| | - Nandita Banerjee
- Division of Crop Improvement, ICAR-Indian Institute of Sugarcane Research, Lucknow, Uttar Pradesh, 226002, India
| | | | - P Govindaraj
- Division of Crop Improvement, ICAR-Sugarcane Breeding Institute, Coimbatore, Tamil Nadu, 641007, India.
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Tiwari M, Singh B, Min D, Jagadish SVK. Omics Path to Increasing Productivity in Less-Studied Crops Under Changing Climate-Lentil a Case Study. FRONTIERS IN PLANT SCIENCE 2022; 13:813985. [PMID: 35615121 PMCID: PMC9125188 DOI: 10.3389/fpls.2022.813985] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Accepted: 04/04/2022] [Indexed: 05/08/2023]
Abstract
Conventional breeding techniques for crop improvement have reached their full potential, and hence, alternative routes are required to ensure a sustained genetic gain in lentils. Although high-throughput omics technologies have been effectively employed in major crops, less-studied crops such as lentils have primarily relied on conventional breeding. Application of genomics and transcriptomics in lentils has resulted in linkage maps and identification of QTLs and candidate genes related to agronomically relevant traits and biotic and abiotic stress tolerance. Next-generation sequencing (NGS) complemented with high-throughput phenotyping (HTP) technologies is shown to provide new opportunities to identify genomic regions and marker-trait associations to increase lentil breeding efficiency. Recent introduction of image-based phenotyping has facilitated to discern lentil responses undergoing biotic and abiotic stresses. In lentil, proteomics has been performed using conventional methods such as 2-D gel electrophoresis, leading to the identification of seed-specific proteome. Metabolomic studies have led to identifying key metabolites that help differentiate genotypic responses to drought and salinity stresses. Independent analysis of differentially expressed genes from publicly available transcriptomic studies in lentils identified 329 common transcripts between heat and biotic stresses. Similarly, 19 metabolites were common across legumes, while 31 were common in genotypes exposed to drought and salinity stress. These common but differentially expressed genes/proteins/metabolites provide the starting point for developing high-yielding multi-stress-tolerant lentils. Finally, the review summarizes the current findings from omic studies in lentils and provides directions for integrating these findings into a systems approach to increase lentil productivity and enhance resilience to biotic and abiotic stresses under changing climate.
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Affiliation(s)
- Manish Tiwari
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
- *Correspondence: Manish Tiwari,
| | - Baljinder Singh
- National Institute of Plant Genome Research, New Delhi, India
| | - Doohong Min
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
| | - S. V. Krishna Jagadish
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
- S. V. Krishna Jagadish,
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Jiang L, Lee MH, Kim CY, Kim SW, Kim PI, Min SR, Lee J. Plant Growth Promotion by Two Volatile Organic Compounds Emitted From the Fungus Cladosporium halotolerans NGPF1. FRONTIERS IN PLANT SCIENCE 2021; 12:794349. [PMID: 34925431 PMCID: PMC8678569 DOI: 10.3389/fpls.2021.794349] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Accepted: 11/09/2021] [Indexed: 06/14/2023]
Abstract
Microbial volatiles have beneficial roles in the agricultural ecological system, enhancing plant growth and inducing systemic resistance against plant pathogens without being hazardous to the environment. The interactions of plant and fungal volatiles have been extensively studied, but there is limited research specifically elucidating the effects of distinct volatile organic compounds (VOCs) on plant growth promotion. The current study was conducted to investigate the impact of VOCs from Cladosporium halotolerans NGPF1 on plant growth, and to elucidate the mechanisms for the plant growth-promoting (PGP) activity of these VOCs. The VOCs from C. halotolerans NGPF1 significantly promoted plant growth compared with the control, and this PGP activity of the VOCs was culture medium-dependent. Headspace solid-phase microextraction (HS-SPME) coupled with gas chromatography-mass spectrometry (GC-MS) identified two VOC structures with profiles that differed depending on the culture medium. The two compounds that were only produced in potato dextrose (PD) medium were identified as 2-methyl-butanal and 3-methyl-butanal, and both modulated plant growth promotion and root system development. The PGP effects of the identified synthetic compounds were analyzed individually and in blends using N. benthamiana plants. A blend of the two VOCs enhanced growth promotion and root system development compared with the individual compounds. Furthermore, real-time PCR revealed markedly increased expression of genes involved in auxin, expansin, and gibberellin biosynthesis and metabolism in plant leaves exposed to the two volatile blends, while cytokinin and ethylene expression levels were decreased or similar in comparison with the control. These findings demonstrate that naturally occurring fungal VOCs can induce plant growth promotion and provide new insights into the mechanism of PGP activity. The application of stimulatory volatiles for growth enhancement could be used in the agricultural industry to increase crop yield.
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Affiliation(s)
- Lingmin Jiang
- Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, South Korea
| | - Myoung Hui Lee
- Wheat Research team, National Institute of Crop Science, Rural Development Administration, Wanju, South Korea
| | - Cha Young Kim
- Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, South Korea
| | - Suk Weon Kim
- Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, South Korea
| | - Pyoung Il Kim
- Center for Industrialization of Agricultural and Livestock Microorganisms (CIALM), Jeongeup, South Korea
| | - Sung Ran Min
- Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea
| | - Jiyoung Lee
- Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, South Korea
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Wang Y, Dai X, Xu G, Dai Z, Chen P, Zhang T, Zhang H. The Ca 2+-CaM Signaling Pathway Mediates Potassium Uptake by Regulating Reactive Oxygen Species Homeostasis in Tobacco Roots Under Low-K + Stress. FRONTIERS IN PLANT SCIENCE 2021; 12:658609. [PMID: 34163499 PMCID: PMC8216240 DOI: 10.3389/fpls.2021.658609] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Accepted: 04/19/2021] [Indexed: 05/31/2023]
Abstract
Potassium (K+) deficiency severely threatens crop growth and productivity. Calcium (Ca2+) signaling and its sensors play a central role in the response to low-K+ stress. Calmodulin (CaM) is an important Ca2+ sensor. However, the mechanism by which Ca2+ signaling and CaM mediate the response of roots to low-K+ stress remains unclear. In this study, we found that the K+ concentration significantly decreased in both shoots and roots treated with Ca2+ channel blockers, a Ca2+ chelator, and CaM antagonists. Under low-K+ stress, reactive oxygen species (ROS) accumulated, and the activity of antioxidant enzymes, NAD kinase (NADK), and NADP phosphatase (NADPase) decreased. This indicates that antioxidant enzymes, NADK, and NADPase might be downstream target proteins in the Ca2+-CaM signaling pathway, which facilitates K+ uptake in plant roots by mediating ROS homeostasis under low-K+ stress. Moreover, the expression of NtCNGC3, NtCNGC10, K+ channel genes, and transporter genes was significantly downregulated in blocker-treated, chelator-treated, and antagonist-treated plant roots in the low K+ treatment, suggesting that the Ca2+-CaM signaling pathway may mediate K+ uptake by regulating the expression of these genes. Overall, this study shows that the Ca2+-CaM signaling pathway promotes K+ absorption by regulating ROS homeostasis and the expression of K+ uptake-related genes in plant roots under low-K+ stress.
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Ruprecht U, Socher SA, Dötterl S. Unexpected Occurrence of Cladosporium spp. on the Inner Surface of the Spathe of the Titan Arum, Amorphophallus titanum. ACTA MYCOLOGICA 2021. [DOI: 10.5586/am.563] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
Abstract
Abstract
The air-borne distributed genus
Cladosporium
Link is globally one of the most common fungal genera. By sequencing the barcode marker ITS, here, we document two taxa belonging to this genus –
C.
cf.
dominicanum
Zalar, de Hoog & Gunde-Cimerman and
C. halotolerans
Zalar, de Hoog & Gunde-Cimerman (
C. sphaerospermum
Penz complex) – which were detected on the inner surface of the spathe of the titan arum,
Amorphophallus titanum
(Becc.) Becc. (Araceae). Titan arum holds the record for the largest unbranched inflorescence in the plant kingdom, with a height reaching up to 3 meters. The two identified
Cladosporium
species are part of a clearly defined fungal layer inside the proximal region of the spathe, surrounding the flower-containing region of the spadix. To the best of our knowledge, this is the first record of a macroscopically visible layer of
Cladosporium
on a living plant material. Furthermore, this study also discusses why this layer occurs only in a spatially restricted region of the spathe, and the possible consequences that the occurrence of these fungi might have on the development and reproduction of the plant.
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Fincheira P, Quiroz A, Tortella G, Diez MC, Rubilar O. Current advances in plant-microbe communication via volatile organic compounds as an innovative strategy to improve plant growth. Microbiol Res 2021; 247:126726. [PMID: 33640574 DOI: 10.1016/j.micres.2021.126726] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 01/25/2021] [Accepted: 02/10/2021] [Indexed: 12/18/2022]
Abstract
Volatile organic compounds (VOCs) emitted by microorganisms have demonstrated an important role to improve growth and tolerance against abiotic stress on plants. Most studies have used Arabidopsis thaliana as a model plant, extending to other plants of commercial interest in the last years. Interestingly, the microbial VOCs are characterized by its biodegradable structure, quick action, absence of toxic substances, and acts at lower concentration to regulate plant physiological changes. These compounds modulate plant physiological processes such as phytohormone pathways, photosynthesis, nutrient acquisition, and metabolisms. Besides, the regulation of gene expression associated with cell components, biological processes, and molecular function are triggered by microbial VOCs. Otherwise, few studies have reported the important role of VOCs for confer plant tolerance to abiotic stress, such as drought and salinity. Although VOCs have shown an efficient action to enhance the plant growth under controlled conditions, there are still great challenges for their greenhouse or field application. Therefore, in this review, we summarize the current knowledge about the technical procedures, study cases, and physiological mechanisms triggered by microbial VOCs to finally discuss the challenges of its application in agriculture.
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Affiliation(s)
- Paola Fincheira
- Centro de Excelencia en Investigación Biotecnológica Aplicada al Medio Ambiente (CIBAMA), Facultad de Ingeniería y Ciencias, Universidad de La Frontera, Av. Francisco Salazar 01145, Temuco, Chile.
| | - Andrés Quiroz
- Centro de Excelencia en Investigación Biotecnológica Aplicada al Medio Ambiente (CIBAMA), Facultad de Ingeniería y Ciencias, Universidad de La Frontera, Av. Francisco Salazar 01145, Temuco, Chile; Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Av. Francisco Salazar 01145, Casilla 54-D, Temuco, Chile
| | - Gonzalo Tortella
- Centro de Excelencia en Investigación Biotecnológica Aplicada al Medio Ambiente (CIBAMA), Facultad de Ingeniería y Ciencias, Universidad de La Frontera, Av. Francisco Salazar 01145, Temuco, Chile; Departamento de Ingeniería Química, Universidad de La Frontera, Av. Francisco Salazar 01145, Casilla 54-D, Temuco, Chile
| | - María Cristina Diez
- Centro de Excelencia en Investigación Biotecnológica Aplicada al Medio Ambiente (CIBAMA), Facultad de Ingeniería y Ciencias, Universidad de La Frontera, Av. Francisco Salazar 01145, Temuco, Chile; Departamento de Ingeniería Química, Universidad de La Frontera, Av. Francisco Salazar 01145, Casilla 54-D, Temuco, Chile
| | - Olga Rubilar
- Centro de Excelencia en Investigación Biotecnológica Aplicada al Medio Ambiente (CIBAMA), Facultad de Ingeniería y Ciencias, Universidad de La Frontera, Av. Francisco Salazar 01145, Temuco, Chile; Departamento de Ingeniería Química, Universidad de La Frontera, Av. Francisco Salazar 01145, Casilla 54-D, Temuco, Chile
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Camarena-Pozos DA, Flores-Núñez VM, López MG, Partida-Martínez LP. Fungal volatiles emitted by members of the microbiome of desert plants are diverse and capable of promoting plant growth. Environ Microbiol 2021; 23:2215-2229. [PMID: 33432727 DOI: 10.1111/1462-2920.15395] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Revised: 01/06/2021] [Accepted: 01/07/2021] [Indexed: 12/11/2022]
Abstract
Fungi represent a group of eukaryotic microorganisms that are an important part of the plant microbiome. They produce a vast array of metabolites, including fungal volatile organic compounds (fVOCs). However, the diversity and biological activities of fVOCs emitted by the mycobiota of plants native to arid and semi-arid environments remain under-explored. We characterized the chemical diversity of fVOCs produced by 22 representative members of the microbiome of agaves and cacti using SPME-GC-MS. We further tested the effects of pure compounds on the growth and development of Arabidopsis thaliana and host plants. Members of the Sordariomycetes (nine strains), Eurotiomycetes (three), Dothideomycetes (eight), Saccharomycetes (one) and Mucoromycetes (one) were included in our study. We identified 94 fungal organic volatiles classified into nine chemical classes. Terpenes showed the greatest chemical diversity, followed by alcohols and aliphatic compounds. We discovered that camphene and benzyl benzoate, together with the widely distributed and already tested benzyl alcohol, 2-phenylethyl alcohol and 3-methyl-1-butanol, improved plant growth and development of A. thaliana, Agave tequilana and Agave salmiana. Our studies on the fungal VOCs from desert plants underscore an untapped chemical diversity with promising biotechnological applications.
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Affiliation(s)
- D A Camarena-Pozos
- Departamento de Ingeniería Genética, Centro de Investigación y de Estudios Avanzados, Irapuato, 36824, Mexico
| | - V M Flores-Núñez
- Departamento de Ingeniería Genética, Centro de Investigación y de Estudios Avanzados, Irapuato, 36824, Mexico
| | - M G López
- Departamento de Biotecnología y Bioquímica, Centro de Investigación y de Estudios Avanzados, Irapuato, 36824, Mexico
| | - L P Partida-Martínez
- Departamento de Ingeniería Genética, Centro de Investigación y de Estudios Avanzados, Irapuato, 36824, Mexico
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11
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Biostimulant-Treated Seedlings under Sustainable Agriculture: A Global Perspective Facing Climate Change. AGRONOMY-BASEL 2020. [DOI: 10.3390/agronomy11010014] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
The primary objectives of modern agriculture includes the environmental sustainability, low production costs, improved plants’ resilience to various biotic and abiotic stresses, and high sowing seed value. Delayed and inconsistent field emergence poses a significant threat in the production of agri-crop, especially during drought and adverse weather conditions. To open new routes of nutrients’ acquisition and revolutionizing the adapted solutions, stewardship plans will be needed to address these questions. One approach is the identification of plant based bioactive molecules capable of altering plant metabolism pathways which may enhance plant performance in a brief period of time and in a cost-effective manner. A biostimulant is a plant material, microorganism, or any other organic compound that not only improves the nutritional aspects, vitality, general health but also enhances the seed quality performance. They may be effectively utilized in both horticultural and cereal crops. The biologically active substances in biostimulant biopreparations are protein hydrolysates (PHs), seaweed extracts, fulvic acids, humic acids, nitrogenous compounds, beneficial bacterial, and fungal agents. In this review, the state of the art and future prospects for biostimulant seedlings are reported and discussed. Biostimulants have been gaining interest as they stimulate crop physiology and biochemistry such as the ratio of leaf photosynthetic pigments (carotenoids and chlorophyll), enhanced antioxidant potential, tremendous root growth, improved nutrient use efficiency (NUE), and reduced fertilizers consumption. Thus, all these properties make the biostimulants fit for internal market operations. Furthermore, a special consideration has been given to the application of biostimulants in intensive agricultural systems that minimize the fertilizers’ usage without affecting quality and yield along with the limits imposed by European Union (EU) regulations.
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12
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Jayawardena RS, Hyde KD, Chen YJ, Papp V, Palla B, Papp D, Bhunjun CS, Hurdeal VG, Senwanna C, Manawasinghe IS, Harischandra DL, Gautam AK, Avasthi S, Chuankid B, Goonasekara ID, Hongsanan S, Zeng X, Liyanage KK, Liu N, Karunarathna A, Hapuarachchi KK, Luangharn T, Raspé O, Brahmanage R, Doilom M, Lee HB, Mei L, Jeewon R, Huanraluek N, Chaiwan N, Stadler M, Wang Y. One stop shop IV: taxonomic update with molecular phylogeny for important phytopathogenic genera: 76–100 (2020). FUNGAL DIVERS 2020. [DOI: 10.1007/s13225-020-00460-8] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
AbstractThis is a continuation of a series focused on providing a stable platform for the taxonomy of phytopathogenic fungi and fungus-like organisms. This paper focuses on one family: Erysiphaceae and 24 phytopathogenic genera: Armillaria, Barriopsis, Cercospora, Cladosporium, Clinoconidium, Colletotrichum, Cylindrocladiella, Dothidotthia,, Fomitopsis, Ganoderma, Golovinomyces, Heterobasidium, Meliola, Mucor, Neoerysiphe, Nothophoma, Phellinus, Phytophthora, Pseudoseptoria, Pythium, Rhizopus, Stemphylium, Thyrostroma and Wojnowiciella. Each genus is provided with a taxonomic background, distribution, hosts, disease symptoms, and updated backbone trees. Species confirmed with pathogenicity studies are denoted when data are available. Six of the genera are updated from previous entries as many new species have been described.
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13
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Nishad R, Ahmed TA. Survey and Identification of Date Palm Pathogens and Indigenous Biocontrol Agents. PLANT DISEASE 2020; 104:2498-2508. [PMID: 32631200 DOI: 10.1094/pdis-12-19-2556-re] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Fungal diseases are considered a major threat to plant growth and productivity. However, some beneficial fungi growing in the same environment protect plants from various pathogens, either by secreting antifungal metabolites or by stimulating the host immune defense mechanism. Date palms are susceptible to several fungal pathogens. Nevertheless, information on the pathogenic fungal distribution in date palm fields across different seasons is limited, especially that from Qatar. Therefore, the current study's aim was to evaluate the pathogenic and beneficial fungal diversity and distribution, including the endophytic fungi from the date palm tissues and root-associated soil fungi, during different seasons, for the identification of indigenous biocontrol agents. Our results showed that the highest number of fungal species was isolated in fall and spring, and pathogenic fungi were isolated mainly in spring. This is the first report that in Qatar, Neodeightonia phoenicum and Thielaviopsis punctulata cause date palm root rot disease, Fusarium brachygibbosum and Fusarium equiseti cause date palm wilting, and N. phoenicum causes diplodia disease in date palm offshoots. The combinations of the fungi that did not frequently occur together in date palm rhizosphere soil were investigated to identify indigenous biocontrol agents. Based on the results, we determined that Trichoderma harzianum and Trichoderma longibrachiatum are effective antagonistic fungi against T. punctulata, N. phoenicum, F. brachygibbosum, and Fusarium solani, qualifying them as potential biocontrol agents. Antagonistic activity of endophytic fungi against the pathogens was tested; except for Ulocladium chartarum, no endophytic fungi showed antagonistic activity against the tested pathogens.[Formula: see text] Copyright © 2020 The Author(s). This is an open access article distributed under the CC BY 4.0 International license.
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Affiliation(s)
- Resna Nishad
- Department of Biological and Environmental Sciences, College of Arts and Science, Qatar University, Doha, Qatar
| | - Talaat A Ahmed
- Department of Biological and Environmental Sciences, College of Arts and Science, Qatar University, Doha, Qatar
- Environmental Science Centre, Qatar University, Doha, Qatar
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14
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Ricci A, Sabbadini S, Prieto H, Padilla IM, Dardick C, Li Z, Scorza R, Limera C, Mezzetti B, Perez-Jimenez M, Burgos L, Petri C. Genetic Transformation in Peach ( Prunus persica L.): Challenges and Ways Forward. PLANTS (BASEL, SWITZERLAND) 2020; 9:E971. [PMID: 32752031 PMCID: PMC7465125 DOI: 10.3390/plants9080971] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 07/28/2020] [Accepted: 07/29/2020] [Indexed: 12/19/2022]
Abstract
Almost 30 years have passed since the first publication reporting regeneration of transformed peach plants. Nevertheless, the general applicability of genetic transformation of this species has not yet been established. Many strategies have been tested in order to obtain an efficient peach transformation system. Despite the amount of time and the efforts invested, the lack of success has significantly limited the utility of peach as a model genetic system for trees, despite its relatively short generation time; small, high-quality genome; and well-studied genetic resources. Additionally, the absence of efficient genetic transformation protocols precludes the application of many biotechnological tools in peach breeding programs. In this review, we provide an overview of research on regeneration and genetic transformation in this species and summarize novel strategies and procedures aimed at producing transgenic peaches. Promising future approaches to develop a robust peach transformation system are discussed, focusing on the main bottlenecks to success including the low efficiency of A. tumefaciens-mediated transformation, the low level of correspondence between cells competent for transformation and those that have regenerative competence, and the high rate of chimerism in the few shoots that are produced following transformation.
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Affiliation(s)
- Angela Ricci
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy
| | - Silvia Sabbadini
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy
| | - Humberto Prieto
- Laboratorio de Biotecnología, La Platina Research Station, Instituto de Investigaciones Agropecuarias, Santa Rosa, La Pintana, Santiago 11610, Chile
| | - Isabel Mg Padilla
- Área de Genómica y Biotecnología, Grupo de Morfogénesis y Modificación Genética, IFAPA-Centro de Churriana, Cortijo de la Cruz s/n, 29140 Málaga, Spain
| | - Chris Dardick
- USDA-ARS-Appalachian Fruit Research Station, 2217 Wiltshire Road, Kearneysville, WV 25430, USA
| | - Zhijian Li
- USDA-ARS-Appalachian Fruit Research Station, 2217 Wiltshire Road, Kearneysville, WV 25430, USA
| | - Ralph Scorza
- Ralph Scorza LLC, Plant Breeding and Biotechnology Consulting Services, P.O. Box 1191, Shepherdstown, WV 25443, USA
| | - Cecilia Limera
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy
| | - Bruno Mezzetti
- Department of Agricultural, Food and Environmental Sciences, Università Politecnica delle Marche, 60131 Ancona, Italy
| | - Margarita Perez-Jimenez
- Mejora Genética de Cítricos, Instituto Murciano de Investigación y Desarrollo Agroalimentario (IMIDA), C/ Mayor s/n, 30150 Murcia, Spain
| | - Lorenzo Burgos
- Departamento de Mejora Vegetal, Grupo de Biotecnología de Frutales, CEBAS-CSIC, Campus Universitario de Espinardo, 30100 Espinardo, Murcia, Spain
| | - Cesar Petri
- Departamento de Fruticultura Subtropical y Mediterránea, IHSM-UMA-CSIC, Avenida Dr. Wienberg, s/n. 29750 Algarrobo-Costa, Málaga, Spain
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15
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Farh MEA, Jeon J. Roles of Fungal Volatiles from Perspective of Distinct Lifestyles in Filamentous Fungi. THE PLANT PATHOLOGY JOURNAL 2020; 36:193-203. [PMID: 32547336 PMCID: PMC7272855 DOI: 10.5423/ppj.rw.02.2020.0025] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Revised: 04/25/2020] [Accepted: 04/27/2020] [Indexed: 05/06/2023]
Abstract
Volatile compounds (VOCs) are not only media for communication within a species but also effective tools for sender to manipulate behavior and physiology of receiver species. Although the influence of VOCs on the interactions among organisms is evident, types of VOCs and specific mechanisms through which VOCs work during such interactions are only beginning to become clear. Here, we review the fungal volatile compounds (FVOCs) and their impacts on different recipient organisms from perspective of distinct lifestyles of the filamentous fungi. Particularly, we discuss the possibility that different lifestyles are intimately associated with an ability to produce a repertoire of FVOCs in fungi. The FVOCs discussed here have been identified and analyzed as relevant signals under a range of experimental settings. However, mechanistic insight into how specific interactions are mediated by such FVOCs at the molecular levels, amidst complex community of microbes and plants, requires further testing. Experimental designs and advanced technologies that attempt to address this question will facilitate our understanding and applications of FVOCs to agriculture and ecosystem management.
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Affiliation(s)
- Mohamed El-Agamy Farh
- Department of Biotechnology, College of Life and Applied Sciences, Yeungnam University, Gyeongsan 38541, Korea
| | - Junhyun Jeon
- Department of Biotechnology, College of Life and Applied Sciences, Yeungnam University, Gyeongsan 38541, Korea
- Corresponding author. Phone) +82-53-810-3030, FAX) +82-53-810-4769, E-mail) , ORCID Junhyun Jeon https://orcid.org/0000-0002-0617-4007
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16
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Lukša J, Vepštaitė-Monstavičė I, Apšegaitė V, Blažytė-Čereškienė L, Stanevičienė R, Strazdaitė-Žielienė Ž, Ravoitytė B, Aleknavičius D, Būda V, Mozūraitis R, Servienė E. Fungal Microbiota of Sea Buckthorn Berries at Two Ripening Stages and Volatile Profiling of Potential Biocontrol Yeasts. Microorganisms 2020; 8:microorganisms8030456. [PMID: 32210172 PMCID: PMC7143951 DOI: 10.3390/microorganisms8030456] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2020] [Revised: 03/08/2020] [Accepted: 03/21/2020] [Indexed: 01/26/2023] Open
Abstract
Sea buckthorn, Hippophae rhamnoides L., has considerable potential for landscape reclamation, food, medicinal, and cosmetics industries. In this study, we analyzed fungal microorganism populations associated with carposphere of sea buckthorn harvested in Lithuania. An amplicon metagenomic approach based on the ITS2 region of fungal rDNA was used to reveal the ripening-affected fungal community alterations on sea buckthorn berries. According to alpha and beta diversity analyses, depending on the ripening stage, sea buckthorn displayed significantly different fungal communities. Unripe berries were shown to be prevalent by Aureobasidium, Taphrina, and Cladosporium, while ripe berries were dominated by Aureobasidium and Metschnikowia. The selected yeast strains from unripe and mature berries were applied for volatile organic compounds identification by gas chromatography and mass spectrometry techniques. It was demonstrated that the patterns of volatiles of four yeast species tested were distinct from each other. The current study for the first time revealed the alterations of fungal microorganism communities colonizing the surface of sea buckthorn berries at different ripening stages. The novel information on specific volatile profiles of cultivable sea buckthorn-associated yeasts with a potential role in biocontrol is important for the development of the strategies for plant cultivation and disease management, as well as for the improvement of the quality and preservation of the postharvest berries. Management of the fungal microorganisms present on the surface of berries might be a powerful instrument for control of phytopathogenic and potentially antagonistic microorganisms affecting development and quality of the berries.
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Affiliation(s)
- Juliana Lukša
- Laboratory of Genetics, Institute of Botany, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania (I.V.-M.); (R.S.); (Ž.S.-Ž.); (B.R.)
| | - Iglė Vepštaitė-Monstavičė
- Laboratory of Genetics, Institute of Botany, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania (I.V.-M.); (R.S.); (Ž.S.-Ž.); (B.R.)
| | - Violeta Apšegaitė
- Laboratory of Chemical and Behavioral Ecology, Institute of Ecology, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania; (V.A.); (L.B.-Č.); (D.A.); (V.B.); (R.M.)
| | - Laima Blažytė-Čereškienė
- Laboratory of Chemical and Behavioral Ecology, Institute of Ecology, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania; (V.A.); (L.B.-Č.); (D.A.); (V.B.); (R.M.)
| | - Ramunė Stanevičienė
- Laboratory of Genetics, Institute of Botany, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania (I.V.-M.); (R.S.); (Ž.S.-Ž.); (B.R.)
| | - Živilė Strazdaitė-Žielienė
- Laboratory of Genetics, Institute of Botany, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania (I.V.-M.); (R.S.); (Ž.S.-Ž.); (B.R.)
| | - Bazilė Ravoitytė
- Laboratory of Genetics, Institute of Botany, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania (I.V.-M.); (R.S.); (Ž.S.-Ž.); (B.R.)
| | - Dominykas Aleknavičius
- Laboratory of Chemical and Behavioral Ecology, Institute of Ecology, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania; (V.A.); (L.B.-Č.); (D.A.); (V.B.); (R.M.)
| | - Vincas Būda
- Laboratory of Chemical and Behavioral Ecology, Institute of Ecology, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania; (V.A.); (L.B.-Č.); (D.A.); (V.B.); (R.M.)
| | - Raimondas Mozūraitis
- Laboratory of Chemical and Behavioral Ecology, Institute of Ecology, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania; (V.A.); (L.B.-Č.); (D.A.); (V.B.); (R.M.)
| | - Elena Servienė
- Laboratory of Genetics, Institute of Botany, Nature Research Centre, Akademijos str. 2, LT-08412 Vilnius, Lithuania (I.V.-M.); (R.S.); (Ž.S.-Ž.); (B.R.)
- Correspondence: ; Tel.: +370-5-272-93-63
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17
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Deyett E, Rolshausen PE. Endophytic microbial assemblage in grapevine. FEMS Microbiol Ecol 2020; 96:5810658. [DOI: 10.1093/femsec/fiaa053] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2020] [Accepted: 03/19/2020] [Indexed: 12/16/2022] Open
Abstract
ABSTRACT
The plant vascular system has remained an underexplored niche despite its potential for hosting beneficial microbes. The aim of this work was to determine the origin of the microbial endophytes inhabiting grapevine. We focused on a single commercial vineyard in California over a two-year period and used an amplicon metagenomics approach to profile the bacterial (16S–V4) and fungal (ITS) communities of the microbiome across a continuum of six grapevine compartments: bulk soil, rhizosphere, root, cordon, cane and sap. Our data supported that roots are a bottleneck to microbial richness and that they are mostly colonized with soilborne microbes, including plant growth-promoting bacteria recruited by the host, but also saprophytic and pathogenic fungal invaders. A core group of taxa was identified throughout the vine; however, there was clear partitioning of the microbiome with niche adaptation of distinct taxonomic groups. Above- and belowground plant tissues displayed distinct microbial fingerprints and were intermixed in a limited capacity mostly by way of the plant sap. We discuss how cultural practices and human contact may shape the endosphere microbiome and identify potential channels for transmission of its residents.
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Affiliation(s)
- E Deyett
- Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA
| | - P E Rolshausen
- Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA
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