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Wheat genomic study for genetic improvement of traits in China. SCIENCE CHINA. LIFE SCIENCES 2022; 65:1718-1775. [PMID: 36018491 DOI: 10.1007/s11427-022-2178-7] [Citation(s) in RCA: 55] [Impact Index Per Article: 27.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2022] [Accepted: 08/10/2022] [Indexed: 01/17/2023]
Abstract
Bread wheat (Triticum aestivum L.) is a major crop that feeds 40% of the world's population. Over the past several decades, advances in genomics have led to tremendous achievements in understanding the origin and domestication of wheat, and the genetic basis of agronomically important traits, which promote the breeding of elite varieties. In this review, we focus on progress that has been made in genomic research and genetic improvement of traits such as grain yield, end-use traits, flowering regulation, nutrient use efficiency, and biotic and abiotic stress responses, and various breeding strategies that contributed mainly by Chinese scientists. Functional genomic research in wheat is entering a new era with the availability of multiple reference wheat genome assemblies and the development of cutting-edge technologies such as precise genome editing tools, high-throughput phenotyping platforms, sequencing-based cloning strategies, high-efficiency genetic transformation systems, and speed-breeding facilities. These insights will further extend our understanding of the molecular mechanisms and regulatory networks underlying agronomic traits and facilitate the breeding process, ultimately contributing to more sustainable agriculture in China and throughout the world.
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Smiley RW. Root-Lesion Nematodes Affecting Dryland Cereals in the Semiarid Pacific Northwest U.S.A. PLANT DISEASE 2021; 105:3324-3343. [PMID: 34236212 DOI: 10.1094/pdis-04-21-0883-fe] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Root-lesion nematodes (Pratylenchus spp.) are parasites that invade and deteriorate roots, thereby reducing the efficiency of water and nutrient uptake. Pratylenchus neglectus and P. thornei are the two species that are most prevalent and cause reduced yields of rainfed wheat and barley in semiarid regions of the Pacific Northwest. They are particularly damaging where wheat and barley are produced without irrigation in areas receiving less than 450 mm (18 in.) of precipitation annually. This review is focused on the biology and management of P. neglectus and P. thornei in semiarid rainfed agriculture. Characteristics of climates, soils, and crop production systems are described as a preface to constraints placed upon management options. Discussions include the economic importance, host ranges, and protocols for sampling and species identification. Discussion of disease management options include crop rotation, genetic resistance and tolerance, planting date, trap and biofumigant crops, crop nutrition, chemical and biological nematicides, and tillage. Predictions for rainfed agriculture in a period of changing climate are presented, as are suggestions for important areas of research including crop genetics, nematode testing, and communication of results, Pratylenchus biology, mechanisms of resistance, the phytobiome, and closing the "yield gap" between actual and attainable yields.
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Affiliation(s)
- Richard W Smiley
- Emeritus Professor of Plant Pathology, Oregon State University, Columbia Basin Agricultural Research Center, Pendleton, OR, U.S.A
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Hunt JR, Kirkegaard JA, Harris FA, Porker KD, Rattey AR, Collins MJ, Celestina C, Cann DJ, Hochman Z, Lilley JM, Flohr BM. Exploiting genotype × management interactions to increase rainfed crop production: a case study from south-eastern Australia. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:5189-5207. [PMID: 34228105 DOI: 10.1093/jxb/erab250] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2021] [Accepted: 05/31/2021] [Indexed: 05/08/2023]
Abstract
Crop yield must increase to keep pace with growing global demand. Past increases in crop production have rarely been attributable to an individual innovation but have occurred when technologies and practices combine to form improved farming systems. Inevitably this has involved synergy between genotypic and management improvements. We argue that research focused on developing synergistic systems that overcome clear production constraints will accelerate increases in yield. This offers the opportunity to better focus and multiply the impact of discipline-focused research. Here we use the rainfed grain production systems of south-eastern Australia as a case study of how transformational change in water productivity can be achieved with research focused on genotype × management synergies. In this region, rainfall is low and variable and has declined since 1990. Despite this, growers have maintained yields by implementing synergistic systems combining innovations in (i) soil water conservation, (ii) crop diversity, (iii) earlier sowing, and (iv) matching nitrogen fertilizer to water-limited demand. Further increases are emerging from synergies between genetic improvements to deliver flowering time stability, adjusted sowing times, and potential dual-purpose use. Collaboration between agronomists, physiologists, and crop breeders has led to development of commercial genotypes with stable flowering time that are in early phases of testing and adoption.
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Affiliation(s)
- James R Hunt
- Department of Animal, Plant and Soil Sciences, La Trobe University, Bundoora, VIC, Australia
| | - John A Kirkegaard
- Commonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture & Food, Canberra, ACT, Australia
| | - Felicity A Harris
- New South Wales Department of Primary Industries, Wagga Wagga, NSW, Australia
| | - Kenton D Porker
- South Australian Research & Development Institute & School of Agriculture, Food & Wine, Waite Research Institute, The University of Adelaide, Urrbrae, SA, Australia
| | | | - Marisa J Collins
- Department of Animal, Plant and Soil Sciences, La Trobe University, Bundoora, VIC, Australia
| | - Corinne Celestina
- Department of Animal, Plant and Soil Sciences, La Trobe University, Bundoora, VIC, Australia
| | - David J Cann
- Department of Animal, Plant and Soil Sciences, La Trobe University, Bundoora, VIC, Australia
| | - Zvi Hochman
- Commonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture & Food, St Lucia, QLD, Australia
| | - Julianne M Lilley
- Commonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture & Food, Canberra, ACT, Australia
| | - Bonnie M Flohr
- Commonwealth Scientific and Industrial Research Organisation (CSIRO) Agriculture & Food, Adelaide, ACT, Australia
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