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Yang D, Wang R, Lai H, He Y, Chen Y, Xun C, Zhang Y, He Z. Comparative Transcriptomic and Lipidomic Analysis of Fatty Acid Accumulation in Three Camellia oleifera Varieties During Seed Maturing. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:18257-18270. [PMID: 39084609 PMCID: PMC11328181 DOI: 10.1021/acs.jafc.4c03614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/02/2024]
Abstract
Camellia oleifera, a major woody oil crop in China, produces tea oil rich in unsaturated fatty acids, earning it names like liquid gold and eastern olive oil. This study provides an integrated investigation of the transcriptome and lipidome within seeds at the maturing process across three C. oleifera varieties, revealing a significant relationship between fatty acid production and genes involved in lipid synthesis. Through transcriptomic analysis, 26,344 genes with varied expression were found. Functional enrichment analysis highlighted that pathways related to starch and sucrose metabolism, plant hormone signal transduction, and lipid accumulation were highly enriched among the differentially expressed genes. Coordinated high expression of key genes (ACCase, KAS I, KAS II, KAS III, KAR, HAD, EAR, SAD, LPAAT, LACS, DGAT, PDAT) during the late maturation stage contributes largely to high oil content. Additionally, expression variations of SAD and FADs among different varieties were explored. The analysis suggests that high expression of genes such as FAD3, FAD7, and FAD8 notably increased linolenic acid content. This research provides new insights into the molecular mechanisms of oil biosynthesis in C. oleifera, offering valuable references for improving yield and quality.
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Affiliation(s)
- Dayu Yang
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Rui Wang
- Research Institute of Oil Tea Camellia, Hunan Academy of Forestry, Changsha 410004, China
- National Engineering Research Center for Oil-Tea Camellia, State Key Laboratory of Utilization of Woody Oil Resource, Hunan Academy of Forestry, Changsha 410116, China
| | - Hanggui Lai
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Yimin He
- School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, China
| | - Yongzhong Chen
- Research Institute of Oil Tea Camellia, Hunan Academy of Forestry, Changsha 410004, China
- National Engineering Research Center for Oil-Tea Camellia, State Key Laboratory of Utilization of Woody Oil Resource, Hunan Academy of Forestry, Changsha 410116, China
| | - Chengfeng Xun
- Research Institute of Oil Tea Camellia, Hunan Academy of Forestry, Changsha 410004, China
- National Engineering Research Center for Oil-Tea Camellia, State Key Laboratory of Utilization of Woody Oil Resource, Hunan Academy of Forestry, Changsha 410116, China
| | - Ying Zhang
- Research Institute of Oil Tea Camellia, Hunan Academy of Forestry, Changsha 410004, China
- National Engineering Research Center for Oil-Tea Camellia, State Key Laboratory of Utilization of Woody Oil Resource, Hunan Academy of Forestry, Changsha 410116, China
| | - Zhilong He
- Research Institute of Oil Tea Camellia, Hunan Academy of Forestry, Changsha 410004, China
- National Engineering Research Center for Oil-Tea Camellia, State Key Laboratory of Utilization of Woody Oil Resource, Hunan Academy of Forestry, Changsha 410116, China
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Zhou L, Sun X, Yarra R, Iqbal A, Wu Q, Li J, Yang Y. Combined transcriptome and metabolome analysis of sugar and fatty acid of aromatic coconut and non-aromatic coconut in China. FOOD CHEMISTRY. MOLECULAR SCIENCES 2024; 8:100190. [PMID: 38259870 PMCID: PMC10801327 DOI: 10.1016/j.fochms.2023.100190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Revised: 12/04/2023] [Accepted: 12/25/2023] [Indexed: 01/24/2024]
Abstract
Sugar and fatty acid content are among the important factors that contribute to the intensity of flavor in aromatic coconut. Gaining a comprehensive understanding of the sugar and fatty acid metabolites in the flesh of aromatic coconuts, along with identifying the key synthetic genes, is of significant importance for improving the development of desirable character traits in these coconuts. However, the related conjoint analysis of metabolic targets and molecular synthesis mechanisms has not been carried out in aromatic coconut until now. UPLC-MS/MS combined with RNA-Seq were performed in aromatic coconut (AC) and non-aromatic coconut (NAC) meat at 7, 9 and 11 months. The results showed that D-fructose in AC coconut meat was 3.48, 2.56 and 3.45 fold higher than that in NAC coconut meat. Similarly, D-glucose in AC coconut meat was 2.48, 2.25 and 3.91 fold higher than that in NAC coconut meat. The NAC coconut meat showed a 1.22-fold rise in the content of lauric acid compared to the AC coconut meat when it reached 11 months of age. Myristic acid content in NAC coconut meat was 1.47, 1.44 and 1.13 fold higher than that in AC coconut meat. The palmitic acid content in NAC coconut meat was 1.62 and 1.34 fold higher than that in AC coconut meat. The genes SPS, GAE, GALE, GLCAK, UGE, UGDH, FBP, GMLS, PFK, GPI, RHM, ACC, FabF, FatA, FabG, and FabI exhibited a negative correlation with D-fructose (r = -0.81) and D-glucose (r = -0.99) contents, while showing a positive correlation (r = 0.85-0.96) with lauric acid and myristic acid. Furthermore, GALE, GLCAK, FBP, GMLS, and ACC displayed a positive correlation (r = 0.83-0.94) with palmitic acid content. The sugar/organic acid ratio exhibited a positive correlation with SPS, GAE, UGE, FabF, FabZ and FabI.
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Affiliation(s)
- Lixia Zhou
- Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences/ Hainan Key Laboratory of Tropical Oil Crops Biology, Wenchang, Hainan, China
| | - Xiwei Sun
- Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences/ Hainan Key Laboratory of Tropical Oil Crops Biology, Wenchang, Hainan, China
| | - Rajesh Yarra
- Department of Plant and Agroecosytem Sciences, University of Wisconsin-Madison, Madison, WI 53706, USA
| | - Amjad Iqbal
- Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences/ Hainan Key Laboratory of Tropical Oil Crops Biology, Wenchang, Hainan, China
- Department of Food Science & Technology, Abdul Wali Khan University Mardan, Pakistan
| | - Qiufei Wu
- Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences/ Hainan Key Laboratory of Tropical Oil Crops Biology, Wenchang, Hainan, China
| | - Jing Li
- Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences/ Hainan Key Laboratory of Tropical Oil Crops Biology, Wenchang, Hainan, China
| | - Yaodong Yang
- Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences/ Hainan Key Laboratory of Tropical Oil Crops Biology, Wenchang, Hainan, China
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Breygina M, Kochkin D, Voronkov A, Ivanova T, Babushkina K, Klimenko E. Plant Hormone and Fatty Acid Screening of Nicotiana tabacum and Lilium longiflorum Stigma Exudates. Biomolecules 2023; 13:1313. [PMID: 37759713 PMCID: PMC10526190 DOI: 10.3390/biom13091313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 08/21/2023] [Accepted: 08/25/2023] [Indexed: 09/29/2023] Open
Abstract
Pollen germination in vivo on wet stigmas is assisted by the receptive fluid-stigma exudate. Its exact composition is still unknown because only some components have been studied. For the first time, hormonal screening was carried out, and the fatty acid (FA) composition of lipid-rich (Nicotiana tabacum) and sugar-rich (Lilium longiflorum) exudates was studied. Screening of exudate for the presence of plant hormones using HPLC-MS revealed abscisic acid (ABA) in tobacco stigma exudate at the two stages of development, at pre-maturity and in mature stigmas awaiting pollination, increasing at the fertile stage. To assess physiological significance of ABA on stigma, we tested the effect of this hormone in vitro. ABA concentration found in the exudate strongly stimulated the germination of tobacco pollen, a lower concentration had a weaker effect, increasing the concentration did not increase the effect. GC-MS analysis showed that both types of exudate are characterized by a predominance of saturated FAs. The lipids of tobacco stigma exudate contain significantly more myristic, oleic, and linoleic acids, resulting in a higher unsaturation index relative to lily stigma exudate lipids. The latter, in turn, contain more 14-hexadecenoic and arachidic acids. Both exudates were found to contain significant amounts of squalene. The possible involvement of saturated FAs, ABA, and squalene in various exudate functions, as well as their potential relationship on the stigma, is discussed.
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Affiliation(s)
- Maria Breygina
- Department of Plant Physiology, Biological Faculty, Lomonosov Moscow State University, LeninskiyeGory 1-12, 119991 Moscow, Russia
| | - Dmitry Kochkin
- Department of Plant Physiology, Biological Faculty, Lomonosov Moscow State University, LeninskiyeGory 1-12, 119991 Moscow, Russia
- Russian Academy of Sciences, Timiryazev Institute of Plant Physiology, Botanicheskaya St. 35, 127276 Moscow, Russia
| | - Alexander Voronkov
- Russian Academy of Sciences, Timiryazev Institute of Plant Physiology, Botanicheskaya St. 35, 127276 Moscow, Russia
| | - Tatiana Ivanova
- Russian Academy of Sciences, Timiryazev Institute of Plant Physiology, Botanicheskaya St. 35, 127276 Moscow, Russia
| | - Ksenia Babushkina
- Department of Plant Physiology, Biological Faculty, Lomonosov Moscow State University, LeninskiyeGory 1-12, 119991 Moscow, Russia
| | - Ekaterina Klimenko
- Department of Plant Physiology, Biological Faculty, Lomonosov Moscow State University, LeninskiyeGory 1-12, 119991 Moscow, Russia
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Wu C, Wang Y, Sun H. Targeted and untargeted metabolomics reveals deep analysis of drought stress responses in needles and roots of Pinus taeda seedlings. FRONTIERS IN PLANT SCIENCE 2023; 13:1031466. [PMID: 36798806 PMCID: PMC9927248 DOI: 10.3389/fpls.2022.1031466] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Accepted: 12/28/2022] [Indexed: 06/01/2023]
Abstract
Drought stress is one of major environmental stresses affecting plant growth and yield. Although Pinus taeda trees are planted in rainy southern China, local drought sometime occurs and can last several months, further affecting their growth and resin production. In this study, P. taeda seedlings were treated with long-term drought (42 d), and then targeted and untargeted metabolomics analysis were carried out to evaluate drought tolerance of P. taeda. Targeted metabolomics analysis showed that levels of some sugars, phytohormones, and amino acids significantly increased in the roots and needles of water-stressed (WS) P. taeda seedlings, compared with well-watered (WW) pine seedlings. These metabolites included sucrose in pine roots, the phytohormones abscisic acid and sacylic acid in pine needles, the phytohormone gibberellin (GA4) and the two amino acids, glycine and asparagine, in WS pine roots. Compared with WW pine seedlings, the neurotransmitter acetylcholine significantly increased in needles of WS pine seedlings, but significantly reduced in their roots. The neurotransmitters L-glutamine and hydroxytyramine significantly increased in roots and needles of WS pine seedlings, respectively, compared with WW pine seedlings, but the neurotransmitter noradrenaline significantly reduced in needles of WS pine seedlings. Levels of some unsaturated fatty acids significantly reduced in roots or needles of WS pine seedlings, compared with WW pine seedlings, such as linoleic acid, oleic acid, myristelaidic acid, myristoleic acid in WS pine roots, and palmitelaidic acid, erucic acid, and alpha-linolenic acid in WS pine needles. However, three saturated fatty acids significantly increased in WS pine seedlings, i.e., dodecanoic acid in WS pine needles, tricosanoic acid and heptadecanoic acid in WS pine roots. Untargeted metabolomics analysis showed that levels of some metabolites increased in WS pine seedlings, especially sugars, long-chain lipids, flavonoids, and terpenoids. A few of specific metabolites increased greatly, such as androsin, piceatanol, and panaxatriol in roots and needles of WS pine seedlings. Comparing with WW pine seedlings, it was found that the most enriched pathways in WS pine needles included flavone and flavonol biosynthesis, ABC transporters, diterpenoid biosynthesis, plant hormone signal transduction, and flavonoid biosynthesis; in WS pine roots, the most enriched pathways included tryptophan metabolism, caffeine metabolism, sesquiterpenoid and triterpenoid biosynthesis, plant hormone signal transduction, biosynthesis of phenylalanine, tyrosine, and tryptophan. Under long-term drought stress, P. taeda seedlings showed their own metabolomics characteristics, and some new metabolites and biosynthesis pathways were found, providing a guideline for breeding drought-tolerant cultivars of P. taeda.
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Affiliation(s)
- Chu Wu
- College of Horticulture & Gardening, Yangtze University, Jingzhou, Hubei, China
| | - Yun Wang
- College of Life Sciences, Yangtze University, Jingzhou, Hubei, China
| | - Honggang Sun
- Institute of Subtropic Forestry, Chinese Academy of Forestry, Fuyang, Zhejiang, China
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Linking Changes in Fatty Acid Composition to Postharvest Needle Abscission Resistance in Balsam Fir Trees. FORESTS 2022. [DOI: 10.3390/f13050800] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Balsam fir needle retention and fatty acid profile changes due to cold acclimation throughout autumn, but little is known about the relationship between these two phenomena. The objective was to examine differences in FAs in contrasting needle abscission resistant balsam fir genotypes throughout autumn and early winter. Branches from genotypes with low and high needle abscission resistance (NAR) were collected from September to January and analyzed for FA composition. High NAR genotypes retained needles 120–130% longer than low NAR genotypes and NAR increased through autumn in both genotypes. There was approximately a 3:1 ratio of unsaturated: saturated FAs, which increased by 4% in favor of unsaturated fatty acids through autumn. Palmitic, palmitoleic, and linolenic acid content was significantly higher in high NAR versus low NAR genotypes; arachidic, oleic, linoleic, pinolenic, coniferonic, icosadienoic, and sciadonic acids were lower in high NAR genotypes versus low. Linolenic acid was of particular interest because it tended to decrease throughout autumn, to the point that high NAR genotypes were significantly lower in linolenic acid than low NAR genotypes in January. These changes may be linked to an increase in abscisic acid and/or jasmonic acid synthesis depleting linolenic acid stores and promoting postharvest needle abscission resistance.
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