Factors Influencing Individual Variation in Farm Animal Cognition and How to Account for These Statistically

Assessment of positive experiences using associative learning in chickens

To determine whether differences in positive experiences can influence associative learning ability, 2 tasks were conducted with 90 laying hens at the peak of the laying period. The selected hens were reared in a larger flock under the same housing conditions without perches, so they had the same rearing experiences and were moved to either enriched cages or to the floor system at 16 wk of age. They belonged to 3 breeds (Slovenian barred hen: Ba; brown hen: Br; silver hen, S), with 30 hens per breed. The predictor signal, the sound of a clicker, with a 3-second delayed reinforcer (commercial layer feed) was used to mark the desired behaviour (pecking for feed). Hens that associated feed with a clicker (85.06%) were taught 2 tasks, the colour discrimination task (CD) and the target following task (TF). In the CD, the hens had to discriminate between yellow, red and blue colors and peck at a yellow magnet only. In the TF, the desired behaviour was to follow a target, a purple ball on a stick, from 1 perch to another and peck it at the end of the perch. The main results of the hens associating the signal with feed were that the Ba hens learned faster than the S hens (P = 0.006) and required fewer clicker sounds than the Br hens in the CD (P = 0.003). Floor hens that completed CD or TF or both took less time to complete the task (CD, P = 0.03, TF, P = 0.06; both tasks, P = 0.02) or with fewer clicker sounds (CD task; P = 0.02) than cage hens. Although these results suggest that Ba hens and floor hens showed better associate learning performance, probably because they perceived their environment as more rewarding and thus potentially more positive, caution is needed in interpretation considering social experiences and that the ability to perch and the ability to move quickly on a perch can be confounded in TF and both tasks can be confounded with foraging ability.

Quantification of play behaviour in calves using automated ultra-wideband location data and its association with age, weaning and health status

Play behaviour can act as an indicator of positive animal welfare. Previous attempts to predict play behaviour in farmed calves are limited because of the classification methods used, which lead to overestimation, and the short time periods that calves are observed. The study aimed to automatically classify and quantify play behaviour in farmed calves using location data from ultra-wide band sensors and to investigate factors associated with play behaviour. Location data were collected from 46 calves in three cohorts for a period of 18 weeks. Behavioural observations from video footage were merged with location data to obtain a total of 101.36 h of labelled data. An AdaBoost ensemble learning algorithm was implemented to classify play behaviour. To account for overestimation, generally seen in low-prevalence behaviours, an adjusted count technique was applied to the outputs of the classifier. Two generalized linear mixed models were fitted to investigate factors (e.g. age, health) associated with duration of play and number of play instances per day. Our algorithm identified play behaviour with > 94% accuracy when evaluated on the test set with no animals used for training, and 16% overestimation, which was computed based on the predicted number of samples of play versus the number of samples labelled as play on the test set. The instances and duration of play behaviour per day significantly decreased with age and sickness, whilst play behaviour significantly increased during and after weaning. The instances of play also significantly decreased as mean temperature increased. We suggest that the quantification method that we used could be used to detect and monitor other low prevalence behaviours (e.g. social grooming) from location data, including indicators of positive welfare.

How do grazing beef and dairy cattle respond to virtual fences? A review

Virtual fencing (VF) is a modern fencing technology that requires the animal to wear a device (e.g., a collar) that emits acoustic signals to replace the visual cue of traditional physical fences (PF) and, if necessary, mild electric signals. The use of devices that provide electric signals leads to concerns regarding the welfare of virtually fenced animals. The objective of this review is to give an overview of the current state of VF research into the welfare and learning behavior of cattle. Therefore, a systematic literature search was conducted using two online databases and reference lists of relevant articles. Studies included were peer-reviewed and written in English, used beef or dairy cattle, and tested neck-mounted VF devices. Further inclusion criteria were a combination of audio and electrical signals and a setup as a pasture trial, which implied that animals grazed in groups on grassland for 4 h minimum while at least one fence side was virtually fenced. The eligible studies (n = 13) were assigned to one or two of the following categories: animal welfare (n studies = 8) or learning behavior (n studies = 9). As data availability for conducting a meta-analysis was not sufficient, a comparison of the means of welfare indicators (daily weight gain, daily lying time, steps per hour, daily number of lying bouts, and fecal cortisol metabolites [FCM]) for virtually and physically fenced animals was done instead. In an additional qualitative approach, the results from the welfare-related studies were assembled and discussed. For the learning behavior, the number of acoustic and electric signals and their ratio were used in a linear regression model with duration in days as a numeric predictor to assess the learning trends over time. There were no significant differences between VF and PF for most welfare indicators (except FCM with lower values for VF; P = 0.0165). The duration in days did not have a significant effect on the number of acoustic and electric signals. However, a significant effect of trial duration on the ratio of electric-to-acoustic signals (P = 0.0014) could be detected, resulting in a decreasing trend of the ratio over time, which suggests successful learning. Overall, we conclude that the VF research done so far is promising but is not yet sufficient to ensure that the technology could not have impacts on the welfare of certain cattle types. More research is necessary to investigate especially possible long-term effects of VF.

Social behavior in farm animals: Applying fundamental theory to improve animal welfare

A fundamental understanding of behavior is essential to improving the welfare of billions of farm animals around the world. Despite living in an environment managed by humans, farm animals are still capable of making important behavioral decisions that influence welfare. In this review, we focus on social interactions as perhaps the most dynamic and challenging aspects of the lives of farm animals. Social stress is a leading welfare concern in livestock, and substantial variation in social behavior is seen at the individual and group level. Here, we consider how a fundamental understanding of social behavior can be used to: (i) understand agonistic and affiliative interactions in farm animals; (ii) identify how artificial environments influence social behavior and impact welfare; and (iii) provide insights into the mechanisms and development of social behavior. We conclude by highlighting opportunities to build on previous work and suggest potential fundamental hypotheses of applied relevance. Key areas for further research could include identifying the welfare benefits of socio–positive interactions, the potential impacts of disrupting important social bonds, and the role of skill in allowing farm animals to navigate competitive and positive social interactions. Such studies should provide insights to improve the welfare of farm animals, while also being applicable to other contexts, such as zoos and laboratories.

Domestic hens succeed at serial reversal learning and perceptual concept generalisation using a new automated touchscreen device

Improving the welfare of farm animals depends on our knowledge on how they perceive and interpret their environment; the latter depends on their cognitive abilities. Hence, limited knowledge of the range of cognitive abilities of farm animals is a major concern. An effective approach to explore the cognitive range of a species is to apply automated testing devices, which are still underdeveloped in farm animals. In screen-like studies, the uses of automated devices are few in domestic hens. We developed an original fully automated touchscreen device using digital computer-drawn colour pictures and independent sensible cells adapted for cognitive testing in domestic hens, enabling a wide range of test types from low to high complexity. This study aimed to test the efficiency of our device using two cognitive tests. We focused on tasks related to adaptive capacities to environmental variability, such as flexibility and generalisation capacities as this is a good start to approach more complex cognitive capacities. We implemented a serial reversal learning task, categorised as a simple cognitive test, and a delayed matching-to-sample (dMTS) task on an identity concept, followed by a generalisation test, categorised as more complex. In the serial reversal learning task, the hens performed equally for the two changing reward contingencies in only three reversal stages. In the dMTS task, the hens increased their performance rapidly throughout the training sessions. Moreover, to the best of our knowledge, we present the first positive result of identity concept generalisation in a dMTS task in domestic hens. Our results provide additional information on the behavioural flexibility and concept understanding of domestic hens. They also support the idea that fully automated devices would improve knowledge of farm animals' cognition.

Is Virtual Fencing an Effective Way of Enclosing Cattle? Personality, Herd Behaviour and Welfare

In modern nature conservation and rewilding there is a need for controlling the movements of large grazers in extensively managed areas. The inflexibility of physical fencing can be a limitation in nature management, and the physical boundaries created by physical fencing can have detrimental effects on wildlife. Virtual fencing systems provide boundaries without physical structures. These systems utilise collars with GPS technology to track animals and deliver auditory or electric cues to encourage the animals to stay within the predefined boundaries. This study aims to assess the use of virtual fencing (Nofence©) to keep twelve Angus cows (Bos taurus) within a virtual enclosure without compromising their welfare. As such, the study examines inter-individual differences between the cows as well as their herd behaviour, when reacting and learning to respond appropriately to virtual fencing. Moreover, the activity of the cows was used as an indicator of welfare. The virtual fencing was successful in keeping the herd within the designated area. Moreover, the cattle learned to avoid the virtual border and respond to auditory cues, where the cows received significantly more auditory warning and electric impulses per week throughout the first 14 days than the remaining 125 days (p < 0.001). The cows were found to express both inter-individual differences (p < 0.001) and herd behaviour. The cattle did not express any significant changes in their activity upon receiving an electrical impulse from the collar. Thus, indicating that there were little to no acute welfare implications associated with the use of virtual fencing in this study. This study clearly supports the potential for virtual fencing as a viable alternative to physical electric fencing. However, it also shows that both individual differences in personality and herd structure should be considered when selecting individuals for virtual fencing.

Do sex differences in construction behavior relate to differences in physical cognitive abilities?

Nest-building behaviour in birds may be particularly relevant to investigating the evolution of physical cognition, as nest building engages cognitive mechanisms for the use and manipulation of materials. We hypothesized that nest-building ecology may be related to physical cognitive abilities. To test our hypothesis, we used zebra finches, which have sex-differentiated roles in nest building. We tested 16 male and 16 female zebra finches on three discrimination tasks in the following order: length discrimination, flexibility discrimination, and color discrimination, using different types of string. We predicted that male zebra finches, which select and deposit the majority of nesting material and are the primary nest builders in this species, would learn to discriminate string length and flexibility-structural traits relevant to nest building-in fewer trials compared to females, but that the sexes would learn color discrimination (not structurally relevant to nest building) in a similar number of trials. Contrary to these predictions, male and female zebra finches did not differ in their speed to learn any of the three tasks. There was, however, consistent among-individual variation in performance: learning speed was positively correlated across the tasks. Our findings suggest that male and female zebra finches either (1) do not differ in their physical cognitive abilities, or (2) any cognitive sex differences in zebra finches are more specific to tasks more closely associated with nest building. Our experiment is the first to examine the potential evolutionary relationship between nest building and physical cognitive abilities.

Incorporating inter-individual variability in experimental design improves the quality of results of animal experiments

Inter-individual variability in quantitative traits is believed to potentially inflate the quality of results in animal experimentation. Yet, to our knowledge this effect has not been empirically tested. Here we test whether inter-individual variability in emotional response within mouse inbred strains affects the outcome of a pharmacological experiment. Three mouse inbred strains (BALB/c, C57BL/6 and 129S2) were behaviorally characterized through repeated exposure to a mild aversive stimulus (modified Hole Board, five consecutive trials). A multivariate clustering procedure yielded two multidimensional response types which were displayed by individuals of all three strains. We show that systematic incorporation of these individual response types in the design of a pharmacological experiment produces different results from an experimental pool in which this variation was not accounted for. To our knowledge, this is the first study that empirically confirms that inter-individual variability affects the interpretation of behavioral phenotypes and may obscure experimental results in a pharmacological experiment.

Exploratory behaviour towards novel objects is associated with enhanced learning in young horses

The mechanisms underlying individual variation in learning are key to understanding the development of cognitive abilities. In humans and primates, curiosity has been suggested as an important intrinsic factor that enhances learning, whereas in domesticated species research has primarily identified factors with a negative effect on cognitive abilities, such as stress and fearfulness. This study presents the first evidence of a link between object-directed curiosity and learning performance in young horses in two very different learning tasks (visual discrimination and pressure-release). We exposed young horses (n = 44) to standardised novel object tests at 5 months and 1 year of age and found consistency in responses. Standard indicators of fearfulness (e.g. heart rate and alertness) were unrelated to learning performance, whereas exploratory behaviour towards the novel objects correlated to performance in both learning tasks. Exploratory behaviour was unreinforced in the novel object tests and likely reflects the animal’s intrinsic motivation (i.e. curiosity), suggesting that this trait is favourable for learning performance. In addition to the insights that these results provide into cognition in a domesticated species, they also raise questions in relation to fostering of curiosity in animals and the impact that such manipulation may have on cognitive abilities.

An individual based, multidimensional approach to identify emotional reactivity profiles in inbred mice

BACKGROUND

Despite extensive environmental standardization and the use of genetically and microbiologically defined mice of similar age and sex, individuals of the same mouse inbred strain commonly differ in quantitative traits. This is a major issue as it affects the quality of experimental results. Standard analysis practices summarize numerical data by means and associated measures of dispersion, while individual values are ignored. Perhaps taking individual values into account in statistical analysis may improve the quality of results.

NEW METHOD

The present study re-inspected existing data on emotional reactivity profiles in 125 BALB/cJ and 129 mice, which displayed contrasting patterns of habituation and sensitization when repeatedly exposed to a novel environment (modified Hole Board). Behaviors were re-analyzed on an individual level, using a multivariate approach, in order to explore whether this yielded new information regarding subtypes of response, and their expression between and within strains.

RESULTS

Clustering individual mice across multiple behavioral dimensions identified two response profiles: a habituation and a sensitization cluster.

COMPARISON WITH EXISTING METHOD(S)

These retrospect analyses identified habituation and sensitization profiles that were similar to those observed in the original data but also yielded new information such as a more pronounced sensitization response. Also, it allowed for the identification of individuals that deviated from the predominant response profile within a strain.

CONCLUSIONS

The present approach allows for the behavioral characterization of experimental animals on an individual level and as such provides a valuable contribution to existing approaches that take individual variation into account in statistical analysis.

Effects of Three Distinct 2-Week Long Diet Strategies After Transport on Weaned Pigs' Short and Long-Term Welfare Markers, Behaviors, and Microbiota

Alternative feed supplements have shown promising effects in terms of performance, but their effects on welfare have had little evaluation. In the present study, we aimed at evaluating the effect of diet supplementation on welfare indicators. A total of 246 piglets were weaned and transported for 12 h. After transport, they were assigned to one of 3 diets for a 14-day period: A-an antibiotic diet including chlortetracycline and tiamulin, NA-a control diet without any antibiotic or feed supplement, GLN-a diet including 0.20% L-glutamine. After the 14-day period, all piglets were fed the same diet. Tear staining was measured 11 times post-weaning (from d0 to 147). Skin lesions were counted before and after weaning (d-2, 2, and 36). Novel object tests (NOT) were done in groups 4 times post-weaning (d17, 47, 85, 111). Samples for 16S rRNA gene composition were collected prior to transport (d0), following the 14-day period (d14) and at the conclusion of the nursery phase (d34). The NA pigs appeared less interested in novel objects. On d17, they avoided the object less than A pigs (P < 0.05). They spent less time exploring the object on d85 and took longer to interact with the object on d111 than A and GLN pigs (P < 0.05). NA pigs also appeared more sensitive to environment and management. They had larger tear stains than GLN pigs on d84 and 110 (P < 0.05). On d2, NA pigs had more lesions than A and GLN (P < 0.01). In terms of microbiota composition, GLN had higher α-diversity than A and NA (P < 0.001). Differences between dietary treatments were absent at d0, were demonstrated at d14 and disappeared at d34. Pearson correlations between aggression, stress and anxiety indicators and bacterial populations were medium to high from 0.31 to 0.69. The results demonstrate that short-term feeding strategy can have both short- and long-term effects on behavior and welfare, that may partly be explained by changes in gut microbiota composition. Supplementation with GLN appears to confer similar benefits to dietary antibiotics and thus could be a viable alternative.

Pre-Exposure to an Electrical Stimulus Primes Associative Pairing of Audio and Electrical Stimuli for Dairy Heifers in a Virtual Fencing Feed Attractant Trial

Simple Summary

Virtual fencing may soon provide an alternative to electric fencing in livestock production systems. In virtual fencing systems, a collar is worn by each animal and emits an audio cue when the animal approaches a virtual boundary that has been set via a Global Positioning System (GPS). An electrical stimulus is delivered by the collar if the animal continues to walk forward, but not if they stop or turn. Over time, the animal increasingly responds to the audio cue alone. A better understanding of factors that influence learning of the association between audio and electrical stimuli may ensure all animals adapt in systems that utilise virtual fencing. Dairy heifers were reared with or without exposure to electric fencing. Heifers with experience of electric fencing showed more rapid learning of the association between audio and electrical stimuli. There were differences between heifers in the speed of associative learning, perhaps due to individual differences in the significance of the audio cue, the aversive nature of the electrical stimulus, or the animal’s motivation to feed. Ethically acceptable virtual fencing requires that all animals learn quickly how to interact with the technology. The technology and training protocols may require continual refinement to account for individual differences in learning.

Abstract

This experiment examined whether pre-exposure to an electrical stimulus from electric fencing attenuates associative pairing of audio and electrical stimuli in dairy heifers. Two treatments were applied to 30 weaned heifers naive to electric fencing. Heifers in the ‘electric-fence’ treatment were exposed to an electrified perimeter fence and two periods of strip-grazing using electrified poly-wire. Control heifers remained naïve to electric fencing. The pairing of audio and electrical stimuli was assessed in a feed attractant trial using manually controlled training collars. Heifers received an audio stimulus (2 s; 84 dB) when they breached a virtual fence after which a short electrical stimulus (0.5 s; 120 mW) was administered if they continued to move forward. If the animal stopped moving forward no further stimuli were applied. By the third training session, electric-fence heifers received a lower proportion of electrical stimuli than control heifers (p = 0.03). The more exploratory interactions a heifer had with the electric fence, the lower the proportion of electrical stimuli she received during training (r^s = −0.77, p = 0.002). We conclude that experience with electrical fencing enhanced the salience of the electrical stimulus delivered by manual collars used for virtual fence training.

Welfare of beef cattle in Australian feedlots: a review of the risks and measures

The rising global demand for animal protein is leading to intensification of livestock production systems. At the same time, societal concerns about sustainability and animal welfare in intensive systems is increasing. This review examines the risks to welfare for beef cattle within commercial feedlots in Australia. Several aspects of the feedlot environment have the potential to compromise the physical and psychological welfare of cattle if not properly monitored and managed. These include, but are not limited to, animal factors such as the influence of genetics, temperament and prior health, as well as management factors such as diet, pen design, resource provision, pregnancy management, and stock-person attitudes and skills. While current industry and producer initiatives exist to address some of these issues, continuous improvements in welfare requires accurate, reliable and repeatable measures to allow quantification of current and future welfare states. Existing measures of welfare are explored as well as proxy indicators that may signal the presence of improved or reduced welfare. Finally, potential future measures of welfare that are currently under development are discussed and recommendations for future research are made.

Exploratory study of the effects of intra-uterine growth retardation and neonatal energy supplementation of low birth-weight piglets on their post-weaning cognitive abilities

The present study investigated the effects of intra-uterine growth retardation (IUGR, score 0-3; i.e., "normal" to "severe") level at birth, and the effects of neonatal energy supplementation (dosed with 2 ml of coconut oil, commercial product or water, or sham-dosed), on post-weaning cognitive abilities of low birth-weight piglets (< 1.1 kg). In total, 184 piglets were recruited at weaning (27 ± 0.1 days) for habituation to the test procedures, and were either tested for spatial learning and memory in a T-maze (n = 42; 37 ± 0.5 days) or for short-term memory in a spontaneous object recognition task (SORT; n = 47; 41 ± 0.3 days). Neonatal supplementation did not affect performances of pigs in the T-maze task or SORT. IUGR3 pigs tended to be faster to enter the reward arm and to obtain the reward in the reversal step of the T-Maze task, suggesting a better learning flexibility, compared to IUGR1 (entry t72.8=2.9, P = 0.024; reward t80 = 3.28, P = 0.008) and IUGR2 (entry t70.3=2.5, P = 0.068; reward t73.9 = 2.77, P = 0.034) pigs. However, a higher percentage of IUGR1 pigs tended to approach the novel object first (DSCF-value = 3.07; P = 0.076) and to interact with it more (t40 = 2.19, P = 0.085), relative to IGUR3 pigs. IUGR1 pigs showed a strong preference for the novel object, as they had a greater percentage time difference interacting with the objects when the novel object was presented (t81 = - 3.41, P = 0.013). In conclusion, some low birth-weight piglets are able to perform a spatial task and an object recognition test, but performances in these tests may be modulated by IUGR level.