Feasibility Study of Native Ureolytic Bacteria for Biocementation Towards Coastal Erosion Protection by MICP Method

Microbially induced carbonate precipitation with Arthrobacter creatinolyticus: An eco-friendly strategy for mitigation of chromium contamination

Chromium contamination from abandoned industrial sites and inadequately managed waste disposal areas poses substantial environmental threat. Microbially induced carbonate precipitation (MICP) has shown promising, eco-friendly solution to remediate Cr(VI) and divalent heavy metals. In this study, MICP was carried out for chromium immobilization by an ureolytic bacterium Arthrobacter creatinolyticus which is capable of reducing Cr(VI) to less toxic Cr(III) via extracellular polymeric substances (EPS) production. The efficacy of EPS driven reduction was confirmed by cellular fraction analysis. MICP carried out in aqueous solution with 100 ppm of Cr(VI) co-precipitated 82.21% of chromium with CaCO3 and the co-precipitation is positively correlated with reduction of Cr(VI). The organism was utilized to remediate chromium spiked sand and found that MICP treatment decreased the exchangeable fraction of chromium to 0.54 ± 0.11% and increased the carbonate bound fraction to 26.1 ± 1.15% compared to control. XRD and SEM analysis revealed that Cr(III) produced during reduction, influenced the polymorph selection of vaterite during precipitation. Evaluation of MICP to remediate Cr polluted soil sample collected from Ranipet, Tamil Nadu also showed effective immobilization of chromium. Thus, A. creatinolyticus proves to be viable option for encapsulating chromium contaminated soil via MICP process, and effectively mitigating the infiltration of Cr(VI) into groundwater and adjacent water bodies.

Fruit and vegetable waste used as bacterial growth media for the biocementation of two geomaterials

This paper investigates the feasibility of using randomly collected fruit and vegetable (FV) waste as a cheap growing medium of bacteria for biocementation applications. Biocementation has been proposed in the literature as an environmentally-friendly ground improvement method to increase the stability of geomaterials, prevent erosion and encapsulate waste, but currently suffers from the high costs involved, such as bacteria cultivation costs. After analysis of FV waste of varied composition in terms of sugar and protein content, diluted FV waste was used to grow ureolytic (S. pasteurii, and B.licheniformis) and also an autochthonous heterotrophic carbonic anhydase (CA)-producing B.licheniformis strain, whose growth in FV media had not been attempted before. Bacterial growth and enzymatic activity in FV were of appropriate levels, although reduced compared to commercial media. Namely, the CA-producing B.licheniformis had a maximum OD600 of 1.799 and a CA activity of 0.817 U/mL in FV media. For the ureolytic pathway, B. licheniformis reached a maximum OD600 of 0.986 and a maximum urease activity of 0.675 mM urea/min, and S. pasteurii a maximum OD600 = 0.999 and a maximum urease activity of 0.756 mM urea/min. Biocementation of a clay and locomotive ash, a geomaterial specific to UK railway embankments, using precultured bacteria in FV was then proven, based on recorded unconfined compressive strengths of 1-3 MPa and calcite content increases of up to 4.02 and 8.62 % for the clay and ash respectively. Scanning Electron Microscope (SEM) and energy dispersive X-ray spectroscopy (EDS), attested the formation of bioprecipitates with characteristic morphologies and elementary composition of calcite crystals. These findings suggest the potential of employing FV to biocement these problematic geomaterials and are of wider relevance for environmental and geoenvironmental applications involving bioaugmentation. Such applications that require substrates in very large quantities can help tackle the management of the very voluminous fruit and vegetable waste produced worldwide.

Soil microbial improvement using enriched vinasse as a new abundant waste

This study proposes the use of vinasse, an inexpensive and readily available waste biopolymer, as a fundamental component of a waste culture medium that can enhance the effectiveness and cost-efficiency of the microbial-induced calcite precipitation (MICP) method for sustainable soil improvement. Vinasse enriched with urea, sodium caseinate, or whey protein concentrate is employed to optimize bacterial growth and urease activity of Sporosarcina pasteurii (S. pasteurii) bacterium. The best culture medium is analyzed using Taguchi design of experiments (TDOE) and statistical analysis, considering the concentration of vinasse and urea as effective parameters during growth time. To test the best culture medium for bio-treated soil, direct shear tests were performed on loose and bio-treated sand. The results demonstrate a substantial cost reduction from $0.455 to $0.005 per liter when using the new culture medium (vinasse and urea) compared to the conventional Nutrient Broth (NB) culture medium. Additionally, the new medium enhances soil shear strength, increasing the friction angle by 2.5 degrees and cohesion to 20.7 kPa compared to the conventional medium. Furthermore, the recycling of vinasse as a waste product can promote the progress of a circular economy and reduce environmental pollution. As ground improvement is essential for many construction projects, especially those that require high shear strength or are built on loose soil, this study provides a promising approach to achieving cost-effective and sustainable soil microbial improvement using enriched vinasse.

Identification of coastal pesticide pollutants as potent inhibitors of Bacillus pasteurii urease mediated calcium carbonate precipitation: a computational approach

Microbially induced calcite precipitation (MICP) through urease enzyme has attained a lot of recognition in various fields of civil engineering and geotechnology for stabilizing the strength of soil and various concrete materials. The activity of urease has been found to be affected by various factors like temperature, substrate concentrations, pH of the medium, presence of inhibitors, etc. Through this study, the outcome of the interaction of pesticides (commonly found in Indian coastal regions) on Bacillus pasteurii urease, a major organism reported for MICP studies has been investigated in silico. The results from the study revealed that the enzyme has higher interactions of -4.1, -3.2, and -3.4 kJ/mol with common pesticides like dichloro diphenyl dichloro ethane(DDD), dichloro diphenyl trichloroe thane (DDT), and methyl parathion of organochlorides and organophosphates class. From the molecular dynamics simulation analysis, complex 1 (DDD -receptor) has been found to have the highest and more compact structure followed by methyl parathion -receptor. Prime MM-GBSA analysis also revealed the highest binding energy of -27.8 kcal/mol with the protein and DDD. Thus, it can be inferred from the current study that pesticides, particularly, DDD, DDT, and methyl parathion present in the coastal areas may have an impact on urease. This interaction can result in the inhibition of the urease activity of B. pasteurii, thus preventing the biomineralization process. This study would be the first report on the computational approach to understanding the interaction of prominent pesticides on the coastal region and B. pasteurii urease.Communicated by Ramaswamy H. Sarma.

A Study on Bio-Stabilisation of Sub-Standard Soil by Indigenous Soil Urease-Producing Bacteria

Sub-standard soils are of great concern worldwide due to diverse economic losses and the possibility of severe environmental hazards ranging from catastrophic landslides, building collapse, and erosion to loss of lives and properties. This study explored the potential of urease-producing bacteria, <i>Bacillus cereus</i> and <i>Bacillus paramycoides</i>, to stabilise sub-standard soil bio-stabilisation. The maximum urease activity measured by <i>B. cereus</i> and <i>B. paramycoides</i> was 665 U/mL and 620 U/mL, respectively. <i>B. cereus</i> and <i>B. paramycoides</i> precipitated 943 ± 57 mg/L and 793 ± 51 mg/L of CaCO₃ at an optical density (425 nm) of 1.01 and 1.09 and pH 8.83 and 8.59, respectively, after 96 hours of incubation. SEM microstructural analysis of the precipitated CaCO₃ revealed crystals of various sizes (2.0–23.0 µm) with different morphologies. XRD analysis confirmed that the precipitated CaCO₃ comprised calcite and aragonite crystals. SEM analysis of the microstructure of organic and sandy clay soils treated with <i>B. cereus</i> and <i>B. paramycoides</i> showed the formation of bio-precipitated calcium carbonate deposits on the soil particles (biocementing soil grains), with <i>B. cereus</i> precipitating more CaCO₃ crystals with a better biocementing effect compared to <i>B. paramycoides</i>. Overall, the experimental results attributed CaCO₃ formation to bacterial-associated processes, suggesting that soil ureolytic bacteria are potentially useful to stabilise sub-standard soil.

Microbial‑induced carbonate precipitation (MICP) technology: a review on the fundamentals and engineering applications

The microbial‑induced carbonate precipitation (MICP), as an emerging biomineralization technology mediated by specific bacteria, has been a popular research focus for scientists and engineers through the previous two decades as an interdisciplinary approach. It provides cutting-edge solutions for various engineering problems emerging in the context of frequent and intense human activities. This paper is aimed at reviewing the fundaments and engineering applications of the MICP technology through existing studies, covering realistic need in geotechnical engineering, construction materials, hydraulic engineering, geological engineering, and environmental engineering. It adds a new perspective on the feasibility and difficulty for field practice. Analysis and discussion within different parts are generally carried out based on specific considerations in each field. MICP may bring comprehensive improvement of static and dynamic characteristics of geomaterials, thus enhancing their bearing capacity and resisting liquefication. It helps produce eco-friendly and durable building materials. MICP is a promising and cost-efficient technology in preserving water resources and subsurface fluid leakage. Piping, internal erosion and surface erosion could also be addressed by this technology. MICP has been proved suitable for stabilizing soils and shows promise in dealing with problematic soils like bentonite and expansive soils. It is also envisaged that this technology may be used to mitigate against impacts of geological hazards such as liquefaction associated with earthquakes. Moreover, global environment issues including fugitive dust, contaminated soil and climate change problems are assumed to be palliated or even removed via the positive effects of this technology. Bioaugmentation, biostimulation, and enzymatic approach are three feasible paths for MICP. Decision makers should choose a compatible, efficient and economical way among them and develop an on-site solution based on engineering conditions. To further decrease the cost and energy consumption of the MICP technology, it is reasonable to make full use of industrial by-products or wastes and non-sterilized media. The prospective direction of this technology is to make construction more intelligent without human intervention, such as autogenous healing. To reach this destination, MICP could be coupled with other techniques like encapsulation and ductile fibers. MICP is undoubtfully a mainstream engineering technology for the future, while ecological balance, environmental impact and industrial applicability should still be cautiously treated in its real practice.

Research status and development of microbial induced calcium carbonate mineralization technology

In nature, biomineralization is a common phenomenon, which can be further divided into authigenic and artificially induced mineralization. In recent years, artificially induced mineralization technology has been gradually extended to major engineering fields. Therefore, by elaborating the reaction mechanism and bacteria of mineralization process, and summarized various molecular dynamics equations involved in the mineralization process, including microbial and nutrient transport equations, microbial adsorption equations, growth equations, urea hydrolysis equations, and precipitation equations. Because of the environmental adaptation stage of microorganisms in sandy soil, their reaction rate in sandy soil environment is slower than that in solution environment, the influencing factors are more different, in general, including substrate concentration, temperature, pH, particle size and grouting method. Based on the characteristics of microbial mineralization such as strong cementation ability, fast, efficient, and easy to control, there are good prospects for application in sandy soil curing, building improvement, heavy metal fixation, oil reservoir dissection, and CO₂ capture. Finally, it is discussed and summarized the problems and future development directions on the road of commercialization of microbial induced calcium carbonate precipitation technology from laboratory to field application.

Durability Improvement of Biocemented Sand by Fiber-Reinforced MICP for Coastal Erosion Protection

Soil improvement via MICP (microbially induced carbonate precipitation) technologies has recently received widespread attention in the geoenvironmental and geotechnical fields. The durability of MICP-treated samples remains a critical concern in this novel method. In this work, fiber (jute)-reinforced MICP-treated samples were investigated to evaluate their durability under exposure to distilled water (DW) and artificial seawater (ASW), so as to advance the understanding of long-term performance mimicking real field conditions, along with improvement of the MICP-treated samples for use in coastal erosion protection. Primarily, the results showed that the addition of fiber (jute) improved the durability of the MICP-treated samples by more than 50%. Results also showed that the wet–dry (WD) cyclic process resulted in adverse effects on the mechanical and physical characteristics of fiber-reinforced MICP-treated samples in both DW and ASW. The breakdown of calcium carbonates and bonding effects in between the sand particles was discovered to be involved in the deterioration of MICP samples caused by WD cycles, and this occurs in two stages. The findings of this study would be extremely beneficial to extend the insight and understanding of improvement and durability responses for significant and effective MICP treatments and/or re-treatments.

A review on the applications of microbially induced calcium carbonate precipitation in solid waste treatment and soil remediation

Improper disposal and accumulation of solid waste can cause a number of environmental problems, such as the heavy metal contamination of soil. Microbially induced calcium carbonate precipitation (MICP) is considered as a promising technology to solve many environmental problems. Calcium-based solid waste can be utilized as an alternative source of calcium for the MICP process, and carbonate-based biominerals can be used for soil remediation, solid waste treatment, remediation of construction concrete, and generation of bioconcrete. This paper describes the metabolic pathways and mechanisms of microbially induced calcium carbonate precipitation and highlights the value of MICP for solid waste treatment and soil remediation applications. The factors affecting the effectiveness of MICP are discussed and analyzed through an overview of recent studies on the application of MICP in environmental engineering. The paper also summarizes the current challenges for the large-scale application of this innovative technology. In prospective study, MICP can be an effective alternative to conventional technologies in solid waste treatment, soil remediation and CO₂ sequestration, as it can reduce negative environmental impacts and provide long-term economic benefits.

An Experimental Investigation of Microbial-Induced Carbonate Precipitation on Mitigating Beach Erosion

Microbial-induced calcium carbonate precipitation (MICP) has the potential to be an environmentally friendly technique alternative to traditional methods for sustainable coastal stabilization. This study used a non-pathogenic strain that exists in nature to experimentally investigate the application of the MICP technique on mitigating sandy beach erosion. First, the unconfined compressive strength (UCS) test was adopted to explore the consolidation performance of beach sand after the MICP treatment, and then model tests in a wave flume were conducted to investigate the MICP ability to mitigate beach erosion by plunger waves. This study also employed field emission scanning electron microscopy (FE-SEM) and energy-dispersive X-ray spectroscopy (EDS) to observe the crystal forms of MICP-treated sand after wave action. The results reveal that the natural beach sand could be consolidated by the MICP treatment, and the compressive strength increased with the increase in the cementation media concentration. In this study, the maximum compressive strength could be achieved was 517.3 kPa. The one-phase and two-phase MICP treatment strategies were compared of sandy beach erosion tests with various spray and injection methods on the beach surface. The research results indicate that the proper MICP treatment could mitigate beach erosion under various wave conditions; the use of MICP reduced beach erosion up to 33.9% of the maximum scour depth.

Beachrock Formation Mechanism Using Multiproxy Experimental Data from Natural and Artificial Beachrocks: Insights for a Potential Soft Engineering Method

Beachrocks are a window to the past environmental, geological, sedimentological and morphological conditions that were dominant in the coastal zone during their formation. Furthermore, beachrocks have the ability to reduce coastal erosion impact on sandy beaches. This study focuses on the beachrock formation mechanism through the comparison of cement characteristics, mineral chemistry and sedimentology of beachrock occurrences from two different geological and geographical localities: Diolkos, Corinth, Greece and Sumuide, Okinawa, Japan. In addition, in order to investigate a potential soft engineering method to protect coasts from erosion, artificial beachrock samples were created in vitro using sand samples and ureolytic bacteria from both areas under accelerating conditions. For Okinawa artificial beachrock experiments, the bacteria Pararhodobacter sp. was used, and for Diolkos, it was the bacteria Micrococcus yunnainensis sp. For the natural beachrocks, a multi-analytical approach was accomplished with the use of microscopic investigation, a scanning electron microscope, energy-dispersive X-ray spectroscopy, X-ray diffraction and X-ray fluorescence. Correlations were made between natural and artificial beachrocks. Results have shown that Diolkos beachrock was formed in the upper part of the intertidal zone, consisting of detrital material originating from the local bedrock, while Sumuide beachrock formed in the low intertidal–upper subtidal zone, consisting of coral sand and foraminifera fragments. For the artificial beachrocks, three samples were created using the microbial-induced carbonate precipitation (MICP) method, one from Diolkos (Corinth, Greece) and two from Sumuide (Okinawa, Japan). Diolkos artificial beachrock was better consolidated in comparison to Sumuide. Our investigation has shown that bacterial density was the key factor for the creation of the artificial beachrocks, while the samples’ granulometry played a secondary role in the process. The laboratory artificial beachrocks show encouraging results for a new soft engineering method to encounter beach erosion while keeping an ecofriendly character by saving energy, material resources and gas emissions. Artificial beachrocks can share the same properties of a natural beachrock and can contribute positively to marine biodiversity as a natural rocky habitat.

Mechanical Properties of a 3D-Printed Wall Segment Made with an Earthen Mixture

This study provides a contribution to the research field of 3D-printed earthen buildings, focusing, for the first time, on the load-bearing capacity of these structures. The study involves the entire production and testing process of the earthen elements, from the design, to the preparation of the mixture and the 3D printing, up to the uniaxial compression test on a wall segment. The results indicate that 3D-printed earthen elements have a compressive strength of 2.32 MPa, comparable to that of rammed earth structures. The experimental data also made it possible to draw conclusions on the action of the infill, which seems to have the function of stopping the propagation of cracks. This has a positive effect on the overall behavior of 3D-printed earthen elements, since it avoids the onset of dilative behavior in the final stages of the load test and maintains ultimate load values higher than 50% of the maximum load.

Evidence of Coastal Changes in the West Coast of Naxos Island, Cyclades, Greece

Coastal lagoons and dunes are of great ecological importance, not only for providing habitats for rare flora and fauna, but also for protecting coastal areas from rising sea levels and storms, etc. Even though these features are unique for sustainable development and are extremely important to the natural environment and economy, they are one of the most vulnerable and threatened ecosystems due to their small size. The western coasts of Naxos (central Aegean Sea) represent an example of such phenomena, with various wetlands bordered by low-lying sand dunes. The aim of our study is to assess the vulnerability and pressures of the western coasts of Naxos Isl. by taking into consideration both natural and anthropogenic factors. We used a variety of approaches for the environmental and geomorphological study of the coastal zone to achieve this goal, including: (a) study of aerial photography from 1960 until today, (b) systematic seasonal aerial monitoring by drone, since 2015, (c) use of DGPS for the mapping of the coastal zone and for obtaining detailed topographic sections, and (d) dune mapping. Our findings reveal the vulnerability of the western coasts of Naxos due to sea level rise, tectonic subsidence, and a variety of anthropogenic pressures, such as uncontrolled parking, vegetation uprooting, sand extractions, and heavy touristic traffic. Therefore, the protection of the sand dunes, their restoration where they have been eroded, the definition of a zone of control, and restriction of human activities must be a key priority.

Biocementation of Calcareous Beach Sand Using Enzymatic Calcium Carbonate Precipitation

Beach sands are composed of a variety of minerals including quartz and different carbonate minerals. Seawater in beach sand contains several ions such as sodium, magnesium, calcium, chloride, sulfate, and potassium. These variations in mineralogy and the presence of salts in beach sand may affect the treatment via enzyme-induced carbonate precipitation (EICP). In this study, set test tube experiments were conducted to evaluate the precipitation kinetics and mineral phase of the precipitates in the presence of zero, five, and ten percent seawater (v/v). The kinetics were studied by measuring electrical conductivity (EC), pH, ammonium concentration, and carbonate precipitation mass in EICP solution at different time intervals. A beach sand was also treated using EICP solution containing zero and ten percent seawater at one, two, and three cycles of treatment. Unconfined compressive strength (UCS), carbonate content, and mineralogy of the precipitates in the treated specimens were evaluated. The kinetics study showed that the rate of urea hydrolysis and the rate of precipitation for zero, five, and ten percent seawater were similar within the first 16 h of the reaction. After 16 h, it was observed that the rates dropped in the solution containing seawater, which might be attributed to the faster decay rate of urease enzyme when seawater is present. All the precipitates from the test tube experiments contained calcite and vaterite, with an increase in vaterite content by increasing the amount of seawater. The presence of ten percent seawater was found to not significantly affect the UCS, carbonate content, and mineralogy of the precipitates of the treated beach sand.

The Influence of the Addition of Plant-Based Natural Fibers (Jute) on Biocemented Sand Using MICP Method

The microbial-induced carbonate precipitation (MICP) method has gained intense attention in recent years as a safe and sustainable alternative for soil improvement and for use in construction materials. In this study, the effects of the addition of plant-based natural jute fibers to MICP-treated sand and the corresponding microstructures were measured to investigate their subsequent impacts on the MICP-treated biocemented sand. The fibers used were at 0%, 0.5%, 1.5%, 3%, 5%, 10%, and 20% by weight of the sand, while the fiber lengths were 5, 15, and 25 mm. The microbial interactions with the fibers, the CaCO₃ precipitation trend, and the biocemented specimen (microstructure) were also evaluated based on the unconfined compressive strength (UCS) values, scanning electron microscopy (SEM), and fluorescence microscopy. The results of this study showed that the added jute fibers improved the engineering properties (ductility, toughness, and brittleness behavior) of the biocemented sand using MICP method. Furthermore, the fiber content more significantly affected the engineering properties of the MICP-treated sand than the fiber length. In this study, the optimal fiber content was 3%, whereas the optimal fiber length was s 15 mm. The SEM results indicated that the fiber facilitated the MICP process by bridging the pores in the calcareous sand, reduced the brittleness of the treated samples, and increased the mechanical properties of the biocemented sand. The results of this study could significantly contribute to further improvement of fiber-reinforced biocemented sand in geotechnical engineering field applications.