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Navinraj S, Boopathi NM, Balasubramani V, Nakkeeran S, Raghu R, Gnanam R, Saranya N, Santhanakrishnan VP. Molecular Docking of Nimbolide Extracted from Leaves of Azadirachta indica with Protein Targets to Confirm the Antifungal, Antibacterial and Insecticidal Activity. Indian J Microbiol 2023; 63:494-512. [PMID: 38031617 PMCID: PMC10682360 DOI: 10.1007/s12088-023-01104-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2022] [Accepted: 09/08/2023] [Indexed: 12/01/2023] Open
Abstract
Nimbolide, a tetranortriterpenoid (limonoid) compound isolated from the leaves of Azadirachta indica, was screened both in vitro and in silico for its antimicrobial activity against Fusarium oxysporum f. sp. cubense, Macrophomina phaseolina, Pythium aphanidermatum, Xanthomonas oryzae pv. oryzae, and insecticidal activity against Plutella xylostella. Nimbolide exhibited a concentration-dependent, broad spectrum of antimicrobial and insecticidal activity. P. aphanidermatum (82.77%) was more highly inhibited than F. oxysporum f. sp. cubense (64.46%) and M. phaseolina (43.33%). The bacterium X. oryzae pv. oryzae forms an inhibition zone of about 20.20 mm, and P. xylostella showed about 66.66% mortality against nimbolide. The affinity of nimbolide for different protein targets in bacteria, fungi, and insects was validated by in silico approaches. The 3D structure of chosen protein molecules was built by homology modelling in the SWISS-MODEL server, and molecular docking was performed with the SwissDock server. Docking of homology-modelled protein structures shows most of the chosen target proteins have a higher affinity for the furan ring of nimbolide. Additionally, the stability of the best-docked protein-ligand complex was confirmed using molecular dynamic simulation. Thus, the present in vitro and in silico studies confirm the bioactivity of nimbolide and provide a strong basis for the formulation of nimbolide-based biological pesticides. Supplementary Information The online version contains supplementary material available at 10.1007/s12088-023-01104-6.
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Affiliation(s)
- S. Navinraj
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, 641 003 India
| | - N. Manikanda Boopathi
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, 641 003 India
| | - V. Balasubramani
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, 641 003 India
| | - S. Nakkeeran
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, 641 003 India
| | - R. Raghu
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, 641 003 India
| | - R. Gnanam
- Department of Plant Molecular Biology and Bioinformatics, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, 641 003 India
| | - N. Saranya
- Department of Plant Molecular Biology and Bioinformatics, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, 641 003 India
| | - V. P. Santhanakrishnan
- Department of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, 641 003 India
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Stack GM, Snyder SI, Toth JA, Quade MA, Crawford JL, McKay JK, Jackowetz JN, Wang P, Philippe G, Hansen JL, Moore VM, Rose JKC, Smart LB. Cannabinoids function in defense against chewing herbivores in Cannabis sativa L. HORTICULTURE RESEARCH 2023; 10:uhad207. [PMID: 38023471 PMCID: PMC10681003 DOI: 10.1093/hr/uhad207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/14/2023] [Accepted: 10/07/2023] [Indexed: 12/01/2023]
Abstract
In the decades since the first cannabinoids were identified by scientists, research has focused almost exclusively on the function and capacity of cannabinoids as medicines and intoxicants for humans and other vertebrates. Very little is known about the adaptive value of cannabinoid production, though several hypotheses have been proposed including protection from ultraviolet radiation, pathogens, and herbivores. To test the prediction that genotypes with greater concentrations of cannabinoids will have reduced herbivory, a segregating F2 population of Cannabis sativa was leveraged to conduct lab- and field-based bioassays investigating the function of cannabinoids in mediating interactions with chewing herbivores. In the field, foliar cannabinoid concentration was inversely correlated with chewing herbivore damage. On detached leaves, Trichoplusia ni larvae consumed less leaf area and grew less when feeding on leaves with greater concentrations of cannabinoids. Scanning electron and light microscopy were used to characterize variation in glandular trichome morphology. Cannabinoid-free genotypes had trichomes that appeared collapsed. To isolate cannabinoids from confounding factors, artificial insect diet was amended with cannabinoids in a range of physiologically relevant concentrations. Larvae grew less and had lower rates of survival as cannabinoid concentration increased. These results support the hypothesis that cannabinoids function in defense against chewing herbivores.
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Affiliation(s)
- George M Stack
- Horticulture Section, School of Integrative Plant Science, Cornell University, Cornell AgriTech, Geneva, NY 14456, United States
| | - Stephen I Snyder
- Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, United States
| | - Jacob A Toth
- Horticulture Section, School of Integrative Plant Science, Cornell University, Cornell AgriTech, Geneva, NY 14456, United States
| | - Michael A Quade
- Horticulture Section, School of Integrative Plant Science, Cornell University, Cornell AgriTech, Geneva, NY 14456, United States
| | - Jamie L Crawford
- Plant Breeding Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, United States
| | - John K McKay
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO 80523, United States
| | | | - Ping Wang
- Department of Entomology, Cornell University, Cornell AgriTech, Geneva, NY 14456, United States
| | - Glenn Philippe
- Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, United States
| | - Julie L Hansen
- Plant Breeding Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, United States
| | - Virginia M Moore
- Plant Breeding Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, United States
| | - Jocelyn K C Rose
- Plant Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, United States
| | - Lawrence B Smart
- Horticulture Section, School of Integrative Plant Science, Cornell University, Cornell AgriTech, Geneva, NY 14456, United States
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Huang S, Huang H, Xie J, Wang F, Fan S, Yang M, Zheng C, Han L, Zhang D. The latest research progress on the prevention of storage pests by natural products: Species, mechanisms, and sources of inspiration. ARAB J CHEM 2022. [DOI: 10.1016/j.arabjc.2022.104189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Foong SY, Chan YH, Loy ACM, How BS, Tamothran AM, Yip AJK, Liew RK, Peng W, Alstrup AK, Lam SS, Sonne C. The nexus between biofuels and pesticides in agroforestry: Pathways toward United Nations sustainable development goals. ENVIRONMENTAL RESEARCH 2022; 214:113751. [PMID: 35753369 DOI: 10.1016/j.envres.2022.113751] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Revised: 06/14/2022] [Accepted: 06/19/2022] [Indexed: 06/15/2023]
Abstract
The growth of global population continuously increases the demands for agroforestry-derived products, underpinning a sustainable growth of energy matrix in the sectors of food security, transportation, and industrial is momentous. The high demand for the sustainable energy sources has led to an increase in the application of pesticides associated with growing crops for the production of biofuel. In 2019, the global consumption of pesticides was 4.2 million tonnes. Case studies on life cycle assessment (LCA) of pesticides showed that toxicity is the major severe impact of pesticide usage, contributing to human toxicity (∼70%) and freshwater eco-toxicity (>50%). This alarming situation needs a solution as conventional pesticides pose various negative impacts to human and the environment, rendering the biofuel production process unsustainable. In this review, we focus on the interaction between pesticide use, biofuel production, food security for a sustainable balancing in between government benefits, environmental, and human health, aiming to track the implications and impact to the global efforts towards achieving the UN Sustainable Development Goals (SDGs). Even though, there are strict government regulations and legislations pertaining to pesticide use, and policies devised as guidelines for agroforestry sectors to implement and monitor these measures, the discrepancies still exist in between national and supranational entities. To cater the above issue, many efforts have been made to upscale the biofuel production, for example, the United States, Brazil, China and Indonesia have ventured into biofuels production from non-food-crops based feedstock while other developing nations are rapidly catching up. In this perspective, a sustainable nexus between Biofuels-Pesticides-Agroforestry (BPA) is essential to create a sustainable roadmap toward the UN SDGs, to fulfilling the energy, food, and land security. The contribution of technologies in BPA includes genetic modified crops, integrated pest and weed management with controlled release pesticides, use of nano-biopesticides is being reviewed. As a whole, the concept of biofuel processing complex (BPC) and farmers upskilling, together with the effective implementation of efficient policies and Internet of Things (IoT) would be the key to drive the BPA nexus towards fulfilment of SDGs.
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Affiliation(s)
- Shin Ying Foong
- Henan Province Engineering Research Center for Biomass Value-added Products, School of Forestry, Henan Agricultural University, Zhengzhou 450002, China; Pyrolysis Technology Research Group, Institute of Tropical Aquaculture and Fisheries (AKUATROP), Universiti Malaysia Terengganu, 21030 Kuala Nerus, Terengganu, Malaysia
| | - Yi Herng Chan
- PETRONAS Research Sdn. Bhd. (PRSB), Lot 3288 & 3289, off Jalan Ayer Itam, Kawasan Institusi Bangi, 43000 Kajang, Selangor, Malaysia
| | | | - Bing Shen How
- Biomass Waste-to-Wealth Special Interest Group, Research Centre for Sustainable Technologies, Faculty of Engineering, Computing and Science, Swinburne University of Technology, Jalan Simpang Tiga, 93350 Kuching, Sarawak, Malaysia.
| | | | - Andrew Jun Kit Yip
- Faculty of Ocean Engineering Technology and Informatics, Universiti Malaysia Terengganu, 21030 Kuala Nerus, Terengganu, Malaysia
| | - Rock Keey Liew
- NV Western PLT, 208B, Second Floor, Macalister Road, 10400 Georgetown, Penang, Malaysia
| | - Wanxi Peng
- Henan Province Engineering Research Center for Biomass Value-added Products, School of Forestry, Henan Agricultural University, Zhengzhou 450002, China
| | - Aage Ko Alstrup
- Aarhus University Hospital, Department of Nuclear Medicine and PET, Palle Juul-Jensens Boulevard 99, DK-8200 Aarhus, Denmark
| | - Su Shiung Lam
- Henan Province Engineering Research Center for Biomass Value-added Products, School of Forestry, Henan Agricultural University, Zhengzhou 450002, China; Pyrolysis Technology Research Group, Institute of Tropical Aquaculture and Fisheries (AKUATROP), Universiti Malaysia Terengganu, 21030 Kuala Nerus, Terengganu, Malaysia; Sustainability Cluster, School of Engineering, University of Petroleum & Energy Studies, Dehradun, Uttarakhand 248007, India.
| | - Christian Sonne
- Henan Province Engineering Research Center for Biomass Value-added Products, School of Forestry, Henan Agricultural University, Zhengzhou 450002, China; Sustainability Cluster, School of Engineering, University of Petroleum & Energy Studies, Dehradun, Uttarakhand 248007, India; Department of Bioscience, Arctic Research Centre (ARC), Aarhus University, Faculty of Science and Technology, Frederiksborgvej 399, PO Box 358, DK-4000 Roskilde, Denmark.
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Nemati S, Mohammad Rahimi H, Hesari Z, Sharifdini M, Jalilzadeh Aghdam N, Mirjalali H, Zali MR. Formulation of Neem oil-loaded solid lipid nanoparticles and evaluation of its anti-Toxoplasma activity. BMC Complement Med Ther 2022; 22:122. [PMID: 35509076 PMCID: PMC9066750 DOI: 10.1186/s12906-022-03607-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2022] [Accepted: 04/26/2022] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Toxoplasmosis is caused by an intracellular zoonotic protozoan, Toxoplasma gondii, which could be lethal in immunocompromised patients. This study aimed to synthesize Neem oil-loaded solid lipid nanoparticles (NeO-SLNs) and to evaluate the anti-Toxoplasma activity of this component. METHODS The NeO-SLNs were constructed using double emulsification method, and their shape and size distribution were evaluated using transmission electron microscope (TEM) and dynamic light scattering (DLS), respectively. An MTT assay was employed to evaluate the cell toxicity of the component. The anti-Toxoplasma activity of NeO-SLNs was investigated using vital (trypan-blue) staining. Anti-intracellular Toxoplasma activity of NeO-SLNs was evaluated in T. gondii-infected Vero cells. RESULTS The TEM analysis represented round shape NeO-SLNs with clear and stable margins. DLS analysis showed a mean particle size 337.6 nm for SLNs, and most of nanoparticles were in range 30 to 120 nm. The cell toxicity of NeO-SLNs was directly correlated with the concentration of the component (P-value = 0.0013). The concentration of NeO-SLNs, which was toxic for at least 50% of alive T. gondii (cytotoxic concentration (CC50)), was > 10 mg/mL. The ability of NeO-SLNs to kill Toxoplasma was concentration-dependent (P-value < 0.0001), and all concentrations killed at least 70% of alive tachyzoites. Furthermore, the viability of T. gondii- infected Vero cells was inversely correlated with NeO-SLNs concentrations (P-value = 0.0317), and in the concentration 100 μg/mL at least 75% of T. gondii- infected Vero cells remained alive. CONCLUSIONS Overall, our findings demonstrated that the NeO-SLNs was able to kill T. gondii tachyzoites in concentration 100 μg/mL with a cell toxicity lower than 20%. Such results suggest that employing SLNs as carrier for NeO can effectively kill T. gondii tachyzoites with acceptable cell toxicity. Our findings also showed that SLNs capsulation of the NeO can lead to prolonged release of the extract, suggesting that NeO-SLNs could be also employed to clear cyst stages, which should be further investigated in animal models.
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Affiliation(s)
- Sara Nemati
- Foodborne and Waterborne Diseases Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Hanieh Mohammad Rahimi
- Foodborne and Waterborne Diseases Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Zahra Hesari
- Department of Pharmaceutics, School of Pharmacy, Guilan University of Medical Sciences, Rasht, Iran
| | - Meysam Sharifdini
- Department of Medical Parasitology and Mycology, School of Medicine, Guilan University of Medical Sciences, Rasht, Iran
| | | | - Hamed Mirjalali
- Foodborne and Waterborne Diseases Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Mohammad Reza Zali
- Gastroenterology and Liver Diseases Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran
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Ibrahim SS. Polyethylene Glycol Nanocapsules Containing Syzygium aromaticum Essential Oil for the Management of Lesser Grain Borer, Rhyzopertha dominica. FOOD BIOPHYS 2022. [DOI: 10.1007/s11483-022-09738-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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