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Lutter F, Brenner W, Krajinski-Barth F, Safavi-Rizi V. Nitric oxide and cytokinin cross-talk and their role in plant hypoxia response. PLANT SIGNALING & BEHAVIOR 2024; 19:2329841. [PMID: 38521996 PMCID: PMC10962617 DOI: 10.1080/15592324.2024.2329841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Accepted: 03/07/2024] [Indexed: 03/25/2024]
Abstract
Nitric oxide (NO) and cytokinins (CKs) are known for their crucial contributions to plant development, growth, senescence, and stress response. Despite the importance of both signals in stress responses, their interaction remains largely unexplored. The interplay between NO and CKs emerges as particularly significant not only regarding plant growth and development but also in addressing plant stress response, particularly in the context of extreme weather events leading to yield loss. In this review, we summarize NO and CKs metabolism and signaling. Additionally, we emphasize the crosstalk between NO and CKs, underscoring its potential impact on stress response, with a focus on hypoxia tolerance. Finally, we address the most urgent questions that demand answers and offer recommendations for future research endeavors.
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Affiliation(s)
- Felix Lutter
- Institute of Biology, Department of General and Applied Botany, University of Leipzig, Leipzig, Germany
| | - Wolfram Brenner
- Institute of Biology, Department of General and Applied Botany, University of Leipzig, Leipzig, Germany
| | - Franziska Krajinski-Barth
- Institute of Biology, Department of General and Applied Botany, University of Leipzig, Leipzig, Germany
| | - Vajiheh Safavi-Rizi
- Institute of Biology, Department of General and Applied Botany, University of Leipzig, Leipzig, Germany
- Institute of Biology, Department of Plant physiology, University of Leipzig, Leipzig, Germany
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2
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Wong WS, Ruscalleda-Alvarez J, Yong JWH, Stevens JC, Valliere JM, Veneklaas EJ. Limited efficacy of a commercial microbial inoculant for improving growth and physiological performance of native plant species. CONSERVATION PHYSIOLOGY 2024; 12:coae037. [PMID: 38894755 PMCID: PMC11184453 DOI: 10.1093/conphys/coae037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Revised: 04/28/2024] [Accepted: 06/10/2024] [Indexed: 06/21/2024]
Abstract
Soil microbial inoculants are increasingly being explored as means to improve soil conditions to facilitate ecological restoration. In southwestern Western Australia, highly biodiverse Banksia woodland plant communities are increasingly threatened by various factors including climate change, land development and mining. Banksia woodland restoration is necessary to conserve this plant community. The use of microbial inoculation in Banksia woodland restoration has not yet been investigated. Here, we evaluated the efficacy of a commercial microbial inoculant (GOGO Juice, Neutrog Australia Pty Ltd) for improving the performance of 10 ecologically diverse Banksia woodland plant species in a pot experiment. Plants were subjected to one of two watering regimes (well-watered and drought) in combination with microbial inoculation treatments (non-inoculated and inoculated). Plants were maintained under these two watering treatments for 10 weeks, at which point plants in all treatments were subjected to a final drought period lasting 8 weeks. Plant performance was evaluated by plant biomass and allocation, gas exchange parameters, foliar carbon and nitrogen and stable isotope (δ15N and δ13C) compositions. Plant xylem sap phytohormones were analysed to investigate the effect of microbial inoculation on plant phytohormone profiles and potential relationships with other observed physiological parameters. Across all investigated plant species, inoculation treatments had small effects on plant growth. Further analysis within each species revealed that inoculation treatments did not result in significant biomass gain under well-watered or drought-stressed conditions, and effects on nitrogen nutrition and photosynthesis were variable and minimal. This suggests that the selected commercial microbial inoculant had limited benefits for the tested plant species. Further investigations on the compatibility between the microorganisms (present in the inoculant) and plants, timing of inoculation, viability of the microorganisms and concentration(s) required to achieve effectiveness, under controlled conditions, and field trials are required to test the feasibility and efficacy in actual restoration environments.
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Affiliation(s)
- Wei San Wong
- School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
- ARC Centre for Mine Site Restoration, School of Molecular and Life Sciences, Curtin University, Kent Street, Bentley, WA 6102, Australia
| | - Jaume Ruscalleda-Alvarez
- School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
- ARC Centre for Mine Site Restoration, School of Molecular and Life Sciences, Curtin University, Kent Street, Bentley, WA 6102, Australia
| | - Jean W H Yong
- School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
- ARC Centre for Mine Site Restoration, School of Molecular and Life Sciences, Curtin University, Kent Street, Bentley, WA 6102, Australia
- Department of Biosystems and Technology, Swedish University of Agricultural Sciences, Sundsvägen 14, Alnarp, Sweden
| | - Jason C Stevens
- School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
- ARC Centre for Mine Site Restoration, School of Molecular and Life Sciences, Curtin University, Kent Street, Bentley, WA 6102, Australia
- Department of Biodiversity, Conservation and Attractions, Kings Park Science, 1 Kattidj Close, Kings Park, WA 6005, Australia
| | - Justin M Valliere
- School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
- ARC Centre for Mine Site Restoration, School of Molecular and Life Sciences, Curtin University, Kent Street, Bentley, WA 6102, Australia
- Department of Plant Sciences, University of California Davis, Davis, CA 95616, United States
| | - Erik J Veneklaas
- School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
- ARC Centre for Mine Site Restoration, School of Molecular and Life Sciences, Curtin University, Kent Street, Bentley, WA 6102, Australia
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3
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Schmidt V, Skokan R, Depaepe T, Kurtović K, Haluška S, Vosolsobě S, Vaculíková R, Pil A, Dobrev PI, Motyka V, Van Der Straeten D, Petrášek J. Phytohormone profiling in an evolutionary framework. Nat Commun 2024; 15:3875. [PMID: 38719800 PMCID: PMC11079000 DOI: 10.1038/s41467-024-47753-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Accepted: 04/09/2024] [Indexed: 05/12/2024] Open
Abstract
The genomes of charophyte green algae, close relatives of land plants, typically do not show signs of developmental regulation by phytohormones. However, scattered reports of endogenous phytohormone production in these organisms exist. We performed a comprehensive analysis of multiple phytohormones in Viridiplantae, focusing mainly on charophytes. We show that auxin, salicylic acid, ethylene and tRNA-derived cytokinins including cis-zeatin are found ubiquitously in Viridiplantae. By contrast, land plants but not green algae contain the trans-zeatin type cytokinins as well as auxin and cytokinin conjugates. Charophytes occasionally produce jasmonates and abscisic acid, whereas the latter is detected consistently in land plants. Several phytohormones are excreted into the culture medium, including auxin by charophytes and cytokinins and salicylic acid by Viridiplantae in general. We note that the conservation of phytohormone biosynthesis and signaling pathways known from angiosperms does not match the capacity for phytohormone biosynthesis in Viridiplantae. Our phylogenetically guided analysis of established algal cultures provides an important insight into phytohormone biosynthesis and metabolism across Streptophyta.
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Affiliation(s)
- Vojtěch Schmidt
- Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czechia
- Department of Experimental Plant Biology, Charles University, Viničná 5, 128 44, Prague 2, Czechia
| | - Roman Skokan
- Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czechia.
| | - Thomas Depaepe
- Laboratory of Functional Plant Biology, Ghent University, K.L. Ledeganckstraat 35, B-9000, Ghent, Belgium
| | - Katarina Kurtović
- Department of Experimental Plant Biology, Charles University, Viničná 5, 128 44, Prague 2, Czechia
| | - Samuel Haluška
- Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czechia
- Department of Experimental Plant Biology, Charles University, Viničná 5, 128 44, Prague 2, Czechia
| | - Stanislav Vosolsobě
- Department of Experimental Plant Biology, Charles University, Viničná 5, 128 44, Prague 2, Czechia
| | - Roberta Vaculíková
- Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czechia
| | - Anthony Pil
- Laboratory of Functional Plant Biology, Ghent University, K.L. Ledeganckstraat 35, B-9000, Ghent, Belgium
| | - Petre Ivanov Dobrev
- Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czechia
| | - Václav Motyka
- Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czechia
| | - Dominique Van Der Straeten
- Laboratory of Functional Plant Biology, Ghent University, K.L. Ledeganckstraat 35, B-9000, Ghent, Belgium
| | - Jan Petrášek
- Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czechia.
- Department of Experimental Plant Biology, Charles University, Viničná 5, 128 44, Prague 2, Czechia.
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4
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Argueso CT, Kieber JJ. Cytokinin: From autoclaved DNA to two-component signaling. THE PLANT CELL 2024; 36:1429-1450. [PMID: 38163638 PMCID: PMC11062471 DOI: 10.1093/plcell/koad327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Revised: 10/25/2023] [Accepted: 11/03/2023] [Indexed: 01/03/2024]
Abstract
Since its first identification in the 1950s as a regulator of cell division, cytokinin has been linked to many physiological processes in plants, spanning growth and development and various responses to the environment. Studies from the last two and one-half decades have revealed the pathways underlying the biosynthesis and metabolism of cytokinin and have elucidated the mechanisms of its perception and signaling, which reflects an ancient signaling system evolved from two-component elements in bacteria. Mutants in the genes encoding elements involved in these processes have helped refine our understanding of cytokinin functions in plants. Further, recent advances have provided insight into the mechanisms of intracellular and long-distance cytokinin transport and the identification of several proteins that operate downstream of cytokinin signaling. Here, we review these processes through a historical lens, providing an overview of cytokinin metabolism, transport, signaling, and functions in higher plants.
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Affiliation(s)
- Cristiana T Argueso
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO 80523, USA
| | - Joseph J Kieber
- Department of Biology, University of North Carolina, Chapel Hill, NC 27599, USA
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5
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Tobin SW, Seneviratne D, Phan L, Seegobin M, Rico AL, Westby B, Kisiala A, Martic S, Brunetti CR, Emery RJN. Profiling of adenine-derived signaling molecules, cytokinins, in myotubes reveals fluctuations in response to lipopolysaccharide-induced cell stress. Physiol Rep 2023; 11:e15870. [PMID: 38040455 PMCID: PMC10691934 DOI: 10.14814/phy2.15870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 11/03/2023] [Accepted: 11/05/2023] [Indexed: 12/03/2023] Open
Abstract
Cytokinins (CTKs) are a diverse collection of evolutionarily conserved adenine-derived signaling molecules classically studied as phytohormones; however, their roles and production have been less studied in mammalian systems. Skeletal muscles are sensitive to cellular cues such as inflammation and in response, alter their secretome to regulate the muscle stem cell and myofiber niche. Using cultured C2C12 muscle cells, we profiled CTK levels to understand (1) whether CTKs are part of the muscle secretome and (2) whether CTKs are responsive to cellular stress. To induce cellular stress, C2C12 myotubes were treated with lipopolysaccharides (LPS) for 24 h and then media and cell fractions were collected for ultra high-performance liquid chromatography tandem mass spectrometry with electrospray ionization (UHPLC-(ESI+)-HRMS/MS) for metabolomics and CTK profiling. Across LPS-treated and control cells, 11 CTKs were detected in the extracellular space while 6 were detected intracellularly. We found that muscle cells are enriched in isopentenyladenine (iP) species (from free base, riboside to nucleotide forms), and that extracellular levels are increased after LPS treatment. Our study establishes that muscle cells express various forms of CTKs, and that CTK levels are responsive to LPS-induced cell stress, suggesting a role for CTKs in intra- and extracellular signaling of mammalian cells.
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Affiliation(s)
- Stephanie W. Tobin
- Department of BiologyTrent UniversityPeterboroughOntarioCanada
- Environmental and Life Sciences Graduate ProgramTrent UniversityPeterboroughOntarioCanada
| | - Dev Seneviratne
- Environmental and Life Sciences Graduate ProgramTrent UniversityPeterboroughOntarioCanada
- Department of Forensic ScienceTrent UniversityPeterboroughCanada
| | - Lorna Phan
- Department of BiologyTrent UniversityPeterboroughOntarioCanada
| | - Mark Seegobin
- Department of BiologyTrent UniversityPeterboroughOntarioCanada
- Environmental and Life Sciences Graduate ProgramTrent UniversityPeterboroughOntarioCanada
| | | | - Beth Westby
- Department of BiologyTrent UniversityPeterboroughOntarioCanada
| | - Anna Kisiala
- Department of BiologyTrent UniversityPeterboroughOntarioCanada
| | - Sanela Martic
- Environmental and Life Sciences Graduate ProgramTrent UniversityPeterboroughOntarioCanada
- Department of Forensic ScienceTrent UniversityPeterboroughCanada
| | - Craig R. Brunetti
- Department of BiologyTrent UniversityPeterboroughOntarioCanada
- Environmental and Life Sciences Graduate ProgramTrent UniversityPeterboroughOntarioCanada
| | - R. J. Neil Emery
- Department of BiologyTrent UniversityPeterboroughOntarioCanada
- Environmental and Life Sciences Graduate ProgramTrent UniversityPeterboroughOntarioCanada
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6
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Jameson PE. Cytokinin Translocation to, and Biosynthesis and Metabolism within, Cereal and Legume Seeds: Looking Back to Inform the Future. Metabolites 2023; 13:1076. [PMID: 37887400 PMCID: PMC10609209 DOI: 10.3390/metabo13101076] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Revised: 10/08/2023] [Accepted: 10/10/2023] [Indexed: 10/28/2023] Open
Abstract
Early in the history of cytokinins, it was clear that Zea mays seeds contained not just trans-zeatin, but its nucleosides and nucleotides. Subsequently, both pods and seeds of legumes and cereal grains have been shown to contain a complex of cytokinin forms. Relative to the very high quantities of cytokinin detected in developing seeds, only a limited amount appears to have been translocated from the parent plant. Translocation experiments, and the detection of high levels of endogenous cytokinin in the maternal seed coat tissues of legumes, indicates that cytokinin does not readily cross the maternal/filial boundary, indicating that the filial tissues are autonomous for cytokinin biosynthesis. Within the seed, trans-zeatin plays a key role in sink establishment and it may also contribute to sink strength. The roles, if any, of the other biologically active forms of cytokinin (cis-zeatin, dihydrozeatin and isopentenyladenine) remain to be elucidated. The recent identification of genes coding for the enzyme that leads to the biosynthesis of trans-zeatin in rice (OsCYP735A3 and 4), and the identification of a gene coding for an enzyme (CPN1) that converts trans-zeatin riboside to trans-zeatin in the apoplast, further cements the key role played by trans-zeatin in plants.
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Affiliation(s)
- Paula E Jameson
- School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch 8140, New Zealand
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7
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Mongès A, Yaakoub H, Bidon B, Glévarec G, Héricourt F, Carpin S, Chauderon L, Drašarová L, Spíchal L, Binder BM, Papon N, Rochange S. Are Histidine Kinases of Arbuscular Mycorrhizal Fungi Involved in the Response to Ethylene and Cytokinins? MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2023; 36:656-665. [PMID: 37851914 DOI: 10.1094/mpmi-05-23-0056-r] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2023]
Abstract
Signals are exchanged at all stages of the arbuscular mycorrhizal (AM) symbiosis between fungi and their host plants. Root-exuded strigolactones are well-known early symbiotic cues, but the role of other phytohormones as interkingdom signals has seldom been investigated. Here we focus on ethylene and cytokinins, for which candidate receptors have been identified in the genome of the AM fungus Rhizophagus irregularis. Ethylene is known from the literature to affect asymbiotic development of AM fungi, and in the present study, we found that three cytokinin forms could stimulate spore germination in R. irregularis. Heterologous complementation of a Saccharomyces cerevisiae mutant strain with the candidate ethylene receptor RiHHK6 suggested that this protein can sense and transduce an ethylene signal. Accordingly, its N-terminal domain expressed in Pichia pastoris displayed saturable binding to radiolabeled ethylene. Thus, RiHHK6 displays the expected characteristics of an ethylene receptor. In contrast, the candidate cytokinin receptor RiHHK7 did not complement the S. cerevisiae mutant strain or Medicago truncatula cytokinin receptor mutants and seemed unable to bind cytokinins, suggesting that another receptor is involved in the perception of these phytohormones. Taken together, our results support the hypothesis that AM fungi respond to a range of phytohormones and that these compounds bear multiple functions in the rhizosphere beyond their known roles as internal plant developmental regulators. Our analysis of two phytohormone receptor candidates also sheds new light on the possible perception mechanisms in AM fungi. [Formula: see text] Copyright © 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
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Affiliation(s)
- Ayla Mongès
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, Centre National de la Recherche Scientifique, Université Paul Sabatier, INP Toulouse, 31326 Castanet-Tolosan, France
| | - Hajar Yaakoub
- UNIV Angers, IRF, SFR 4208 ICAT, F-49000 Angers, France
| | | | - Gaëlle Glévarec
- EA2106 Biomolécules et Biotechnologies Végétales, Université de Tours, Tours, France
| | - François Héricourt
- Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), Université d'Orléans, INRAE USC1328, 45067 Orléans Cedex 2, France
| | - Sabine Carpin
- Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), Université d'Orléans, INRAE USC1328, 45067 Orléans Cedex 2, France
| | - Lucie Chauderon
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, Centre National de la Recherche Scientifique, Université Paul Sabatier, INP Toulouse, 31326 Castanet-Tolosan, France
| | - Lenka Drašarová
- Isotope Laboratory, Institute of Experimental Botany, The Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic
| | - Lukáš Spíchal
- Czech Advanced Technology and Research Institute, Šlechtitelů 27, Olomouc CZ-783 71, Palacký University, Olomouc, Czech Republic
| | - Brad M Binder
- Department of Biochemistry and Cellular & Molecular Biology, University of Tennessee, Knoxville, TN, U.S.A
| | - Nicolas Papon
- UNIV Angers, IRF, SFR 4208 ICAT, F-49000 Angers, France
| | - Soizic Rochange
- Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, Centre National de la Recherche Scientifique, Université Paul Sabatier, INP Toulouse, 31326 Castanet-Tolosan, France
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8
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In search of the phytohormone functions in Fungi:Cytokinins. FUNGAL BIOL REV 2023. [DOI: 10.1016/j.fbr.2023.100309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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9
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Powell AE, Heyl A. The origin and early evolution of cytokinin signaling. FRONTIERS IN PLANT SCIENCE 2023; 14:1142748. [PMID: 37457338 PMCID: PMC10338860 DOI: 10.3389/fpls.2023.1142748] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/12/2023] [Accepted: 05/23/2023] [Indexed: 07/18/2023]
Abstract
Angiosperms, especially Arabidopsis and rice, have long been at the center of plant research. However, technological advances in sequencing have led to a dramatic increase in genome and transcriptome data availability across land plants and, more recently, among green algae. These data allowed for an in-depth study of the evolution of different protein families - including those involved in the metabolism and signaling of phytohormones. While most early studies on phytohormone evolution were phylogenetic, those studies have started to be complemented by genetic and biochemical studies in recent years. Examples of such functional analyses focused on ethylene, jasmonic acid, abscisic acid, and auxin. These data have been summarized recently. In this review, we will focus on the progress in our understanding of cytokinin biology. We will use these data to synthesize key points about the evolution of cytokinin metabolism and signaling, which might apply to the evolution of other phytohormones as well.
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10
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Jameson PE. Zeatin: The 60th anniversary of its identification. PLANT PHYSIOLOGY 2023; 192:34-55. [PMID: 36789623 PMCID: PMC10152681 DOI: 10.1093/plphys/kiad094] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Revised: 02/06/2023] [Accepted: 02/08/2023] [Indexed: 05/03/2023]
Abstract
While various labs had shown cell division-inducing activity in a variety of plant extracts for over a decade, the identification of zeatin (Z) in 1964, the first known naturally occurring cytokinin, belongs to Letham and co-workers. Using extracts from maize (Zea mays), they were the first to obtain crystals of pure Z and in sufficient quantity for structural determination by MS, NMR, chromatography, and mixed melting-point analysis. This group also crystallized Z-9-riboside (ZR) from coconut (Cocos nucifera) milk. However, their chemical contributions go well beyond the identification of Z and ZR and include two unambiguous syntheses of trans-Z (to establish stereochemistry), the synthesis of 3H-cytokinins that facilitated metabolic studies, and the synthesis of deuterated internal standards for accurate mass spectral quantification. Letham and associates also unequivocally identified Z nucleotide, the 7-and 9-glucoside conjugates of Z, and the O-glucosides of Z, ZR, dihydro Z (DHZ) and DHZR as endogenous compounds and as metabolites of exogenous Z. Their contributions to the role of cytokinins in plant physiology and development were also substantial, especially the role of cytokinins moving in the xylem. These biological advances are described and briefly related to the genetic/molecular biological contributions of others that established that plants have an absolute requirement for cytokinin.
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Affiliation(s)
- Paula Elizabeth Jameson
- School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch 8140, New Zealand
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11
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Sun X, Liu L, Cheng L. Photo- and Tetrazine-Responsive Modulation of trans-Zeatin. J Org Chem 2023. [PMID: 36763518 DOI: 10.1021/acs.joc.2c02601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/11/2023]
Abstract
Photoirradiation and small organic molecule triggering of appropriately designed caged hormones enable the control and manipulation of the corresponding biological processes with high spatial and temporal resolution. Caged trans-zeatin substituted with nitrobenzene carbonates as photoremovable protecting groups and trans-cyclooctene as the tetrazine-responsive motif have been synthesized. A smooth release of the trapped trans-zeatin molecule has been achieved, permitting targeted perturbation of biological processes, including degradation, glucosylation, and recognition by appropriate enzymes.
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Affiliation(s)
- Xin Sun
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Li Liu
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Liang Cheng
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
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12
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Breygina M, Voronkov A, Galin I, Akhiyarova G, Polevova S, Klimenko E, Ivanov I, Kudoyarova G. Dynamics of endogenous levels and subcellular localization of ABA and cytokinins during pollen germination in spruce and tobacco. PROTOPLASMA 2023; 260:237-248. [PMID: 35579760 DOI: 10.1007/s00709-022-01766-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Accepted: 04/24/2022] [Indexed: 06/15/2023]
Abstract
We used the enzyme-linked immunosorbent assay (ELISA) to assess the level of endogenous hormones in spruce pollen, and immunolocalization and confocal microscopy to study hormone localization in spruce and tobacco pollen. During pollen activation, the levels of ABA, zeatin, and its riboside significantly decreased. After the initiation of polar growth, the levels of all cytokinins increased sharply; ABA level also increased. In dormant spruce pollen grains, zeatin and ABA were localized uniformly throughout the cytoplasm. Zeatin was not detected in the nuclei, and the antheridial cell showed higher levels than the vegetative cell; ABA signal was detected in the cytoplasm and the nuclei. In germinating pollen, both hormones were detected mainly in plastids. The similar pattern was found in growing pollen tubes; signal from ABA also had a noticeable level in the cytosol of the tube cell, and was weaker in the antheridial cell. Zeatin fluorescence, on the other hand, was more pronounced in the antheridial cell. In non-germinated grains of tobacco, zeatin was localized mainly in organelles. ABA in dormant pollen grains demonstrated uniform localization, including the nuclei and cytoplasm of both cells. After germination, zeatin was accumulated in the plasmalemma or cell wall. ABA signal in the cytoplasm decreased; in the nuclei, it remained high. In growing tubes, the strongest zeatin and ABA signals were observed at the plasma membrane. The differences in ABA and cytokinin localization between species and dynamic changes in their level in spruce pollen highlight the key spatial and temporal parameters of hormonal regulation of gymnosperm pollen germination.
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Affiliation(s)
- Maria Breygina
- Biological Faculty, Lomonosov Moscow State University, Leninskiye gory 1-12, Moscow, 119991, Russia.
| | - Alexander Voronkov
- Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya St. 35, Moscow, 127276, Russia
| | - Ilshat Galin
- Institute of Biology, Ufa Research Centre, Russian Academy of Sciences, pr. Oktyabrya 69, 450054, Ufa, Russia
| | - Guzel Akhiyarova
- Institute of Biology, Ufa Research Centre, Russian Academy of Sciences, pr. Oktyabrya 69, 450054, Ufa, Russia
| | - Svetlana Polevova
- Biological Faculty, Lomonosov Moscow State University, Leninskiye gory 1-12, Moscow, 119991, Russia
| | - Ekaterina Klimenko
- Biological Faculty, Lomonosov Moscow State University, Leninskiye gory 1-12, Moscow, 119991, Russia
| | - Igor Ivanov
- Institute of Biology, Ufa Research Centre, Russian Academy of Sciences, pr. Oktyabrya 69, 450054, Ufa, Russia
| | - Guzel Kudoyarova
- Institute of Biology, Ufa Research Centre, Russian Academy of Sciences, pr. Oktyabrya 69, 450054, Ufa, Russia
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Matušková V, Zatloukal M, Pospíšil T, Voller J, Vylíčilová H, Doležal K, Strnad M. From synthesis to the biological effect of isoprenoid 2'-deoxyriboside and 2',3'-dideoxyriboside cytokinin analogues. PHYTOCHEMISTRY 2023; 205:113481. [PMID: 36283448 DOI: 10.1016/j.phytochem.2022.113481] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2022] [Revised: 10/16/2022] [Accepted: 10/17/2022] [Indexed: 06/16/2023]
Abstract
Isoprenoid cytokinins are a class of naturally occurring plant signaling molecules. A series of prepared compounds derived from isoprenoid cytokinins (isopentenyladenine, trans-zeatin and cis-zeatin) with attached 2'-deoxy-d-ribose or 2',3'-dideoxy-d-ribose at the N9 position of the purine were prepared and their biological activities were examined. Different synthetic approaches were employed. The final compounds were characterized with variety of physicochemical methods (TLC, HPLC-MS, and NMR) and their cytokinin activity was determined in classical bioassays such as Amaranthus, tobacco callus, detached wheat leaf senescence and Arabidopsis thaliana root elongation inhibition assay. In addition, compounds were screened for activation of the cytokinin signaling pathway (bacterial receptor, competitive ligand binding and ARR5::GUS assay) to provide a detailed assessment of CK structure-activity relationship. The prepared compounds were found to be non-toxic to human cells and the majority of assays exhibited the highest activity of free bases while 2',3'-dideoxyribosides had very weak or no activity. In contrast to the free bases, all 2'-deoxyriboside derivatives were not toxic to tobacco callus even at the highest tested concentration (10-4 moL/l) and compound 1 (iPdR) induced betacyanin synthesis at higher concentration even stronger than iP free base in the Amaranthus bioassay. The general cytokinin activity pattern base > riboside >2'-deoxyriboside > 2',3'-dideoxyriboside was distinguished.
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Affiliation(s)
- Vlasta Matušková
- Department of Chemical Biology, Faculty of Science, Palacký University, Šlechtitelů 241/27, CZ-78371 Olomouc, Czech Republic.
| | - Marek Zatloukal
- Department of Chemical Biology, Faculty of Science, Palacký University, Šlechtitelů 241/27, CZ-78371 Olomouc, Czech Republic
| | - Tomáš Pospíšil
- Department of Chemical Biology, Faculty of Science, Palacký University, Šlechtitelů 241/27, CZ-78371 Olomouc, Czech Republic
| | - Jiří Voller
- Department of Experimental Biology, Faculty of Science, Palacký University, Šlechtitelů 241/27, CZ-78371 Olomouc, Czech Republic
| | - Hana Vylíčilová
- Department of Chemical Biology, Faculty of Science, Palacký University, Šlechtitelů 241/27, CZ-78371 Olomouc, Czech Republic
| | - Karel Doležal
- Department of Chemical Biology, Faculty of Science, Palacký University, Šlechtitelů 241/27, CZ-78371 Olomouc, Czech Republic; Laboratory of Growth Regulators, Faculty of Science, Institute of Experimental Botany of the Czech Academy of Sciences, Palacký University, Šlechtitelů 241/27, CZ-78371 Olomouc, Czech Republic
| | - Miroslav Strnad
- Laboratory of Growth Regulators, Faculty of Science, Institute of Experimental Botany of the Czech Academy of Sciences, Palacký University, Šlechtitelů 241/27, CZ-78371 Olomouc, Czech Republic
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Phytohormones 2020. Biomolecules 2022; 12:biom12091305. [PMID: 36139144 PMCID: PMC9496212 DOI: 10.3390/biom12091305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2022] [Accepted: 09/04/2022] [Indexed: 11/27/2022] Open
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Sharma A, Prakash S, Chattopadhyay D. Killing two birds with a single stone-genetic manipulation of cytokinin oxidase/dehydrogenase ( CKX) genes for enhancing crop productivity and amelioration of drought stress response. Front Genet 2022; 13:941595. [PMID: 35923693 PMCID: PMC9340367 DOI: 10.3389/fgene.2022.941595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Accepted: 06/29/2022] [Indexed: 12/02/2022] Open
Abstract
The development of high-yielding, bio-fortified, stress-tolerant crop cultivars is the need of the hour in the wake of increasing global food insecurity, abrupt climate change, and continuous shrinking of resources and landmass suitable for agriculture. The cytokinin group of phytohormones positively regulates seed yield by simultaneous regulation of source capacity (leaf senescence) and sink strength (grain number and size). Cytokinins also regulate root-shoot architecture by promoting shoot growth and inhibiting root growth. Cytokinin oxidase/dehydrogenase (CKX) are the only enzymes that catalyze the irreversible degradation of active cytokinins and thus negatively regulate the endogenous cytokinin levels. Genetic manipulation of CKX genes is the key to improve seed yield and root-shoot architecture through direct manipulation of endogenous cytokinin levels. Downregulation of CKX genes expressed in sink tissues such as inflorescence meristem and developing seeds, through reverse genetics approaches such as RNAi and CRISPR/Cas9 resulted in increased yield marked by increased number and size of grains. On the other hand, root-specific expression of CKX genes resulted in decreased endogenous cytokinin levels in roots which in turn resulted in increased root growth indicated by increased root branching, root biomass, and root-shoot biomass ratio. Enhanced root growth provided enhanced tolerance to drought stress and improved micronutrient uptake efficiency. In this review, we have emphasized the role of CKX as a genetic factor determining yield, micronutrient uptake efficiency, and response to drought stress. We have summarised the efforts made to increase crop productivity and drought stress tolerance in different crop species through genetic manipulation of CKX family genes.
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Zhai B, He JJ, Xie SC, Qiu Y, Miao Z, Liu Y, Zhu XQ, Zhang J. Metabolomics study of cat small intestine during the early stage of Toxoplasma gondii oocyst formation identifies potential biomarkers. Vet Parasitol 2022; 309:109764. [PMID: 35870221 DOI: 10.1016/j.vetpar.2022.109764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2022] [Revised: 07/13/2022] [Accepted: 07/14/2022] [Indexed: 11/30/2022]
Abstract
Toxoplasma gondii (T. gondii) is a zoonotic intracellular protozoan parasite that can invade, replicate and survive in almost all cells of warm-blooded animals. T. gondii infection threatens the life of the fetus or can cause morbidity in the infant. As the only definitive host of T. gondii, felids spread the pathogen mainly by forming oocysts in the small intestines and discharging the oocysts into the ambient environment, consequently polluting water, vegetables, and meat products. In this study, we used untargeted metabolomics technology to study the changes in metabolites that occurred during the early stage of oocyst formation in the cat small intestine following T. gondii infection and attempted to identify metabolic biomarkers that could potentially be used as diagnostic molecular markers in the future. Domestic cats (Felis catus) were infected with T. gondii Pru tissue cysts, and samples of their small intestinal epithelium were collected at 2 and 4 days post-infection (DPI) for metabolic analysis. LC-MS/MS and multivariate statistical analysis were employed to detect metabolomic signatures that discriminated between the infected and control groups. A total of 1673 ions and 1201 ions were obtained in the positive and negative modes, respectively. Of these ions, 175 were up-regulated and 127 were down-regulated in the positive ion mode; whereas, 123 were up-regulated and 81 were down-regulated in the negative ion mode. Three commonly altered ions (0.74_313.0414 m/z, 8.82_615.2621 m/z and 8.16_325.2362 m/z) were determined to have potential research value. Seventy common metabolic pathways were enriched at two time points, with arginine biosynthesis, pyrimidine metabolism, pantothenate and CoA biosynthesis being the three most significant pathways related to T. gondii. The area under the curve (AUC) of differential metabolites combined with relevant literature analysis showed that N-Methylpelletierine and 3,3-Difluoro-17-methyl-5alpha-androstan-17beta-ol have higher predictability and better potential application value than other metabolites. Our analysis of metabolic markers during the early stage of T. gondii oocyst formation in the small intestine of the definitive host (cat) provided novel insight for understanding oocyst development and a theoretical basis for the application of potential biomarkers.
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Affiliation(s)
- Bintao Zhai
- Key Laboratory of Veterinary Pharmaceutical Development, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, Ministry of Agriculture, Lanzhou, Gansu Province 730050, People's Republic of China
| | - Jun-Jun He
- Key Laboratory of Veterinary Public Health of Yunnan Province, College of Veterinary Medicine, Yunnan Agricultural University, Kunming, Yunnan Province 650201, People's Republic of China
| | - Shi-Chen Xie
- College of Veterinary Medicine, Shanxi Agricultural University, Taigu, Shanxi Province 030801, People's Republic of China; Research Center for Parasites & Vectors, College of Veterinary Medicine, Hunan Agricultural University, Changsha, Hunan Province 410128, People's Republic of China
| | - Yanhua Qiu
- Key Laboratory of Veterinary Pharmaceutical Development, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, Ministry of Agriculture, Lanzhou, Gansu Province 730050, People's Republic of China
| | - Zengqiang Miao
- Medical College of Qinghai University, Qinghai University, Xining, Qinghai Province 810016, People's Republic of China
| | - Yang Liu
- College of Life Science, Ningxia University, Yinchuan, Ningxia Hui Autonomous Region 750021, People's Republic of China
| | - Xing-Quan Zhu
- Key Laboratory of Veterinary Public Health of Yunnan Province, College of Veterinary Medicine, Yunnan Agricultural University, Kunming, Yunnan Province 650201, People's Republic of China; College of Veterinary Medicine, Shanxi Agricultural University, Taigu, Shanxi Province 030801, People's Republic of China.
| | - Jiyu Zhang
- Key Laboratory of Veterinary Pharmaceutical Development, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, Ministry of Agriculture, Lanzhou, Gansu Province 730050, People's Republic of China.
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Wang W, Ren Z, Li L, Du Y, Zhou Y, Zhang M, Li Z, Yi F, Duan L. Meta-QTL analysis explores the key genes, especially hormone related genes, involved in the regulation of grain water content and grain dehydration rate in maize. BMC PLANT BIOLOGY 2022; 22:346. [PMID: 35842577 PMCID: PMC9287936 DOI: 10.1186/s12870-022-03738-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Accepted: 07/06/2022] [Indexed: 06/15/2023]
Abstract
BACKGROUND Low grain water content (GWC) at harvest of maize (Zea mays L.) is essential for mechanical harvesting, transportation and storage. Grain drying rate (GDR) is a key determinant of GWC. Many quantitative trait locus (QTLs) related to GDR and GWC have been reported, however, the confidence interval (CI) of these QTLs are too large and few QTLs has been fine-mapped or even been cloned. Meta-QTL (MQTL) analysis is an effective method to integrate QTLs information in independent populations, which helps to understand the genetic structure of quantitative traits. RESULTS In this study, MQTL analysis was performed using 282 QTLs from 25 experiments related GDR and GWC. Totally, 11 and 34 MQTLs were found to be associated with GDR and GWC, respectively. The average CI of GDR and GWC MQTLs was 24.44 and 22.13 cM which reduced the 57 and 65% compared to the average QTL interval for initial GDR and GWC QTL, respectively. Finally, 1494 and 5011 candidate genes related to GDR and GWC were identified in MQTL intervals, respectively. Among these genes, there are 48 genes related to hormone metabolism. CONCLUSIONS Our studies combined traditional QTL analyses, genome-wide association study and RNA-seq to analysis major locus for regulating GWC in maize.
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Affiliation(s)
- Wei Wang
- State Key Laboratory of Plant Physiology and Biochemistry, Engineering Research Center of Plant Growth Regulator, Ministry of Education &College of Agronomy and Biotechnology, China Agricultural University, No.2 Yuanmingyuan West Road, Haidian, Beijing, 100193, China
| | - Zhaobin Ren
- State Key Laboratory of Plant Physiology and Biochemistry, Engineering Research Center of Plant Growth Regulator, Ministry of Education &College of Agronomy and Biotechnology, China Agricultural University, No.2 Yuanmingyuan West Road, Haidian, Beijing, 100193, China
| | - Lu Li
- State Key Laboratory of Plant Physiology and Biochemistry, Engineering Research Center of Plant Growth Regulator, Ministry of Education &College of Agronomy and Biotechnology, China Agricultural University, No.2 Yuanmingyuan West Road, Haidian, Beijing, 100193, China
| | - Yiping Du
- State Key Laboratory of Plant Physiology and Biochemistry, Engineering Research Center of Plant Growth Regulator, Ministry of Education &College of Agronomy and Biotechnology, China Agricultural University, No.2 Yuanmingyuan West Road, Haidian, Beijing, 100193, China
| | - Yuyi Zhou
- State Key Laboratory of Plant Physiology and Biochemistry, Engineering Research Center of Plant Growth Regulator, Ministry of Education &College of Agronomy and Biotechnology, China Agricultural University, No.2 Yuanmingyuan West Road, Haidian, Beijing, 100193, China
| | - Mingcai Zhang
- State Key Laboratory of Plant Physiology and Biochemistry, Engineering Research Center of Plant Growth Regulator, Ministry of Education &College of Agronomy and Biotechnology, China Agricultural University, No.2 Yuanmingyuan West Road, Haidian, Beijing, 100193, China
| | - Zhaohu Li
- State Key Laboratory of Plant Physiology and Biochemistry, Engineering Research Center of Plant Growth Regulator, Ministry of Education &College of Agronomy and Biotechnology, China Agricultural University, No.2 Yuanmingyuan West Road, Haidian, Beijing, 100193, China
| | - Fei Yi
- State Key Laboratory of Plant Physiology and Biochemistry, Engineering Research Center of Plant Growth Regulator, Ministry of Education &College of Agronomy and Biotechnology, China Agricultural University, No.2 Yuanmingyuan West Road, Haidian, Beijing, 100193, China.
| | - Liusheng Duan
- State Key Laboratory of Plant Physiology and Biochemistry, Engineering Research Center of Plant Growth Regulator, Ministry of Education &College of Agronomy and Biotechnology, China Agricultural University, No.2 Yuanmingyuan West Road, Haidian, Beijing, 100193, China
- College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China
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Chen L, Jameson GB, Guo Y, Song J, Jameson PE. The LONELY GUY gene family: from mosses to wheat, the key to the formation of active cytokinins in plants. PLANT BIOTECHNOLOGY JOURNAL 2022; 20:625-645. [PMID: 35108444 PMCID: PMC8989509 DOI: 10.1111/pbi.13783] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2021] [Revised: 01/06/2022] [Accepted: 01/13/2022] [Indexed: 05/19/2023]
Abstract
LONELY GUY (LOG) was first identified in a screen of rice mutants with defects in meristem maintenance. In plants, LOG codes for cytokinin riboside 5'-monophosphate phosphoribohydrolase, which converts inactive cytokinin nucleotides directly to the active free bases. Many enzymes with the PGGxGTxxE motif have been misannotated as lysine decarboxylases; conversely not all enzymes containing this motif are cytokinin-specific LOGs. As LOG mutants clearly impact yield in rice, we investigated the LOG gene family in bread wheat. By interrogating the wheat (Triticum aestivum) genome database, we show that wheat has multiple LOGs. The close alignment of TaLOG1, TaLOG2 and TaLOG6 with the X-ray structures of two functional Arabidopsis thaliana LOGs allows us to infer that the wheat LOGs 1-11 are functional LOGs. Using RNA-seq data sets, we assessed TaLOG expression across 70 tissue types, their responses to various stressors, the pattern of cis-regulatory elements (CREs) and intron/exon patterns. TaLOG gene family members are expressed variously across tissue types. When the TaLOG CREs are compared with those of the cytokinin dehydrogenases (CKX) and glucosyltransferases (CGT), there is close alignment of CREs between TaLOGs and TaCKXs reflecting the key role of CKX in maintaining cytokinin homeostasis. However, we suggest that the main homeostatic mechanism controlling cytokinin levels in response to biotic and abiotic challenge resides in the CGTs, rather than LOG or CKX. However, LOG transgenics and identified mutants in rice variously impact yield, providing interesting avenues for investigation in wheat.
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Affiliation(s)
- Lei Chen
- School of Life SciencesYantai UniversityYantaiChina
| | | | - Yichu Guo
- School of Life SciencesYantai UniversityYantaiChina
| | - Jiancheng Song
- School of Life SciencesYantai UniversityYantaiChina
- Yantai Jien Biological Science & Technology LtdYEDAYantaiChina
| | - Paula E. Jameson
- School of Life SciencesYantai UniversityYantaiChina
- School of Biological SciencesUniversity of CanterburyChristchurchNew Zealand
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Palberg D, Kisiała A, Jorge GL, Emery RJN. A survey of Methylobacterium species and strains reveals widespread production and varying profiles of cytokinin phytohormones. BMC Microbiol 2022; 22:49. [PMID: 35135483 PMCID: PMC8822675 DOI: 10.1186/s12866-022-02454-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2021] [Accepted: 01/21/2022] [Indexed: 12/02/2022] Open
Abstract
Background Symbiotic Methylobacterium strains comprise a significant part of plant microbiomes. Their presence enhances plant productivity and stress resistance, prompting classification of these strains as plant growth-promoting bacteria (PGPB). Methylobacteria can synthesize unusually high levels of plant hormones, called cytokinins (CKs), including the most active form, trans-Zeatin (tZ). Results This study provides a comprehensive inventory of 46 representatives of Methylobacterium genus with respect to phytohormone production in vitro, including 16 CK forms, abscisic acid (ABA) and indole-3-acetic acid (IAA). High performance-liquid chromatography—tandem mass spectrometry (HPLC–MS/MS) analyses revealed varying abilities of Methylobacterium strains to secrete phytohormones that ranged from 5.09 to 191.47 pmol mL−1 for total CKs, and 0.46 to 82.16 pmol mL−1 for tZ. Results indicate that reduced methanol availability, the sole carbon source for bacteria in the medium, stimulates CK secretion by Methylobacterium. Additionally, select strains were able to transform L-tryptophan into IAA while no ABA production was detected. Conclusions To better understand features of CKs in plants, this study uncovers CK profiles of Methylobacterium that are instrumental in microbe selection for effective biofertilizer formulations. Supplementary Information The online version contains supplementary material available at 10.1186/s12866-022-02454-9.
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Affiliation(s)
- Daniel Palberg
- Environmental and Life Sciences Graduate Program, Trent University, 1600 West Bank Drive, Peterborough, ON, K9L 0G2, Canada
| | - Anna Kisiała
- Department of Biology, Trent University, 1600 West Bank Drive, Peterborough, ON, K9L 0G2, Canada.
| | - Gabriel Lemes Jorge
- Department of Biology, Trent University, 1600 West Bank Drive, Peterborough, ON, K9L 0G2, Canada.,Department of Technology, Sao Paulo State University, Jaboticabal, Sao Paulo, Brazil
| | - R J Neil Emery
- Department of Biology, Trent University, 1600 West Bank Drive, Peterborough, ON, K9L 0G2, Canada
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Balotf S, Wilson R, Tegg RS, Nichols DS, Wilson CR. In Planta Transcriptome and Proteome Profiles of Spongospora subterranea in Resistant and Susceptible Host Environments Illuminates Regulatory Principles Underlying Host-Pathogen Interaction. BIOLOGY 2021; 10:biology10090840. [PMID: 34571717 PMCID: PMC8471823 DOI: 10.3390/biology10090840] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Revised: 08/23/2021] [Accepted: 08/25/2021] [Indexed: 01/13/2023]
Abstract
Simple Summary Infections of potato tubers and roots by Spongospora subterranea result in powdery scab and root diseases. Losses due to infections with S. subterranea are substantial in most potato-growing regions of the world with no fully effective treatments available. Understanding the gene regulation of pathogens in their host is dependent on multidimensional datasets. In this study, we profiled the transcriptome and proteome of S. subterranea within the susceptible and resistant host. Enzyme activity and nucleic acid metabolism appear to be important to the virulence of S. subterranea. Our results provide a good resource for future functional studies of powdery scab and might be useful in S. subterranea inoculum management. Abstract Spongospora subterranea is an obligate biotrophic pathogen, causing substantial economic loss to potato industries globally. Currently, there are no fully effective management strategies for the control of potato diseases caused by S. subterranea. To further our understanding of S. subterranea biology during infection, we characterized the transcriptome and proteome of the pathogen during the invasion of roots of a susceptible and a resistant potato cultivar. A total of 7650 transcripts from S. subterranea were identified in the transcriptome analysis in which 1377 transcripts were differentially expressed between two cultivars. In proteome analysis, we identified 117 proteins with 42 proteins significantly changed in comparisons between resistant and susceptible cultivars. The functional annotation of transcriptome data indicated that the gene ontology terms related to the transportation and actin processes were induced in the resistant cultivar. The downregulation of enzyme activity and nucleic acid metabolism in the resistant cultivar suggests a probable influence of these processes in the virulence of S. subterranea. The protein analysis results indicated that the majority of differentially expressed proteins were related to the metabolic processes and transporter activity. The present study provides a comprehensive molecular insight into the multiple layers of gene regulation that contribute to S. subterranea infection and development in planta and illuminates the role of host immunity in affecting pathogen responses.
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Affiliation(s)
- Sadegh Balotf
- Tasmanian Institute of Agriculture, New Town Research Laboratories, University of Tasmania, New Town, TAS 7008, Australia; (S.B.); (R.S.T.)
| | - Richard Wilson
- Central Science Laboratory, University of Tasmania, Hobart, TAS 7001, Australia; (R.W.); (D.S.N.)
| | - Robert S. Tegg
- Tasmanian Institute of Agriculture, New Town Research Laboratories, University of Tasmania, New Town, TAS 7008, Australia; (S.B.); (R.S.T.)
| | - David S. Nichols
- Central Science Laboratory, University of Tasmania, Hobart, TAS 7001, Australia; (R.W.); (D.S.N.)
| | - Calum R. Wilson
- Tasmanian Institute of Agriculture, New Town Research Laboratories, University of Tasmania, New Town, TAS 7008, Australia; (S.B.); (R.S.T.)
- Correspondence:
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Integrating the Roles for Cytokinin and Auxin in De Novo Shoot Organogenesis: From Hormone Uptake to Signaling Outputs. Int J Mol Sci 2021; 22:ijms22168554. [PMID: 34445260 PMCID: PMC8395325 DOI: 10.3390/ijms22168554] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Revised: 08/01/2021] [Accepted: 08/03/2021] [Indexed: 12/01/2022] Open
Abstract
De novo shoot organogenesis (DNSO) is a procedure commonly used for the in vitro regeneration of shoots from a variety of plant tissues. Shoot regeneration occurs on nutrient media supplemented with the plant hormones cytokinin (CK) and auxin, which play essential roles in this process, and genes involved in their signaling cascades act as master regulators of the different phases of shoot regeneration. In the last 20 years, the genetic regulation of DNSO has been characterized in detail. However, as of today, the CK and auxin signaling events associated with shoot regeneration are often interpreted as a consequence of these hormones simply being present in the regeneration media, whereas the roles for their prior uptake and transport into the cultivated plant tissues are generally overlooked. Additionally, sucrose, commonly added to the regeneration media as a carbon source, plays a signaling role and has been recently shown to interact with CK and auxin and to affect the efficiency of shoot regeneration. In this review, we provide an integrative interpretation of the roles for CK and auxin in the process of DNSO, adding emphasis on their uptake from the regeneration media and their interaction with sucrose present in the media to their complex signaling outputs that mediate shoot regeneration.
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22
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Nguyen HN, Nguyen TQ, Kisiala AB, Emery RJN. Beyond transport: cytokinin ribosides are translocated and active in regulating the development and environmental responses of plants. PLANTA 2021; 254:45. [PMID: 34365553 DOI: 10.1007/s00425-021-03693-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Accepted: 08/01/2021] [Indexed: 06/13/2023]
Abstract
Riboside type cytokinins are key components in cytokinin metabolism, transport, and sensitivity, making them important functional signals in plant growth and development and environmental stress responses. Cytokinin (CKs) are phytohormones that regulate multiple processes in plants and are critical for agronomy, as they are involved in seed filling and plant responses to biotic and abiotic stress. Among the over 30 identified CKs, there is uncertainty about the roles of many of the individual CK structural forms. Cytokinin free bases (CKFBs), have been studied in great detail, but, by comparison, roles of riboside-type CKs (CKRs) in CK metabolism and associated signaling pathways and their distal impacts on plant physiology remain largely unknown. Here, recent findings on CKR abundance, transport and localization, are summarized, and their importance in planta is discussed. The history of CKR analyses is reviewed, in the context of the determination of CK metabolic pathways, and research on CKR affinity for CK receptors, all of which yield essential insights into their functions. Recent studies suggest that CKR forms are a lot more than a group of transport CKs and, beyond this, they play important roles in plant development and responses to environmental stress. In this context, this review discusses the involvement of CKRs in plant development, and highlight the less anticipated functions of CKRs in abiotic stress tolerance. Based on this, possible mechanisms for CKR modes of action are proposed and experimental approaches to further uncover their roles and future biotechnological applications are suggested.
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Affiliation(s)
- Hai Ngoc Nguyen
- Department of Biology, Trent University, Peterborough, ON, K9L 0G2, Canada.
| | - Thien Quoc Nguyen
- Department of Biology, Trent University, Peterborough, ON, K9L 0G2, Canada
| | - Anna B Kisiala
- Department of Biology, Trent University, Peterborough, ON, K9L 0G2, Canada
| | - R J Neil Emery
- Department of Biology, Trent University, Peterborough, ON, K9L 0G2, Canada
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Frébortová J, Frébort I. Biochemical and Structural Aspects of Cytokinin Biosynthesis and Degradation in Bacteria. Microorganisms 2021; 9:microorganisms9061314. [PMID: 34208724 PMCID: PMC8234997 DOI: 10.3390/microorganisms9061314] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Revised: 06/11/2021] [Accepted: 06/14/2021] [Indexed: 11/16/2022] Open
Abstract
It has been known for quite some time that cytokinins, hormones typical of plants, are also produced and metabolized in bacteria. Most bacteria can only form the tRNA-bound cytokinins, but there are examples of plant-associated bacteria, both pathogenic and beneficial, that actively synthesize cytokinins to interact with their host. Similar to plants, bacteria produce diverse cytokinin metabolites, employing corresponding metabolic pathways. The identification of genes encoding the enzymes involved in cytokinin biosynthesis and metabolism facilitated their detailed characterization based on both classical enzyme assays and structural approaches. This review summarizes the present knowledge on key enzymes involved in cytokinin biosynthesis, modifications, and degradation in bacteria, and discusses their catalytic properties in relation to the presence of specific amino acid residues and protein structure.
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Záveská Drábková L, Honys D, Motyka V. Evolutionary diversification of cytokinin-specific glucosyltransferases in angiosperms and enigma of missing cis-zeatin O-glucosyltransferase gene in Brassicaceae. Sci Rep 2021; 11:7885. [PMID: 33846460 PMCID: PMC8041765 DOI: 10.1038/s41598-021-87047-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2020] [Accepted: 03/23/2021] [Indexed: 11/09/2022] Open
Abstract
In the complex process of homeostasis of phytohormones cytokinins (CKs), O-glucosylation catalyzed by specific O-glucosyltransferases represents one of important mechanisms of their reversible inactivation. The CK O-glucosyltransferases belong to a highly divergent and polyphyletic multigene superfamily of glycosyltransferases, of which subfamily 1 containing UDP-glycosyltransferases (UGTs) is the largest in the plant kingdom. It contains recently discovered O and P subfamilies present in higher plant species but not in Arabidopsis thaliana. The cis-zeatin O-glucosyltransferase (cisZOG) genes belong to the O subfamily encoding a stereo-specific O-glucosylation of cis-zeatin-type CKs. We studied different homologous genes, their domains and motifs, and performed a phylogenetic reconstruction to elucidate the plant evolution of the cisZOG gene. We found that the cisZOG homologs do not form a clear separate clade, indicating that diversification of the cisZOG gene took place after the diversification of the main angiosperm families, probably within genera or closely related groups. We confirmed that the gene(s) from group O is(are) not present in A. thaliana and is(are) also missing in the family Brassicaceae. However, cisZOG or its metabolites are found among Brassicaceae clade, indicating that remaining genes from other groups (UGT73-group D and UGT85-group G) are able, at least in part, to substitute the function of group O lost during evolution. This study is the first detailed evolutionary evaluation of relationships among different plant ZOGs within angiosperms.
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Affiliation(s)
- Lenka Záveská Drábková
- Laboratory of Pollen Biology, Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czech Republic.
| | - David Honys
- Laboratory of Pollen Biology, Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czech Republic
| | - Václav Motyka
- Laboratory of Hormonal Regulations in Plants, Institute of Experimental Botany of the Czech Academy of Sciences, Rozvojová 263, 165 02, Prague 6, Czech Republic.
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Nedvěd D, Hošek P, Klíma P, Hoyerová K. Differential Subcellular Distribution of Cytokinins: How Does Membrane Transport Fit into the Big Picture? Int J Mol Sci 2021; 22:3428. [PMID: 33810428 PMCID: PMC8037549 DOI: 10.3390/ijms22073428] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Revised: 03/02/2021] [Accepted: 03/22/2021] [Indexed: 12/17/2022] Open
Abstract
Cytokinins are a class of phytohormones, signalling molecules specific to plants. They act as regulators of diverse physiological processes in complex signalling pathways. It is necessary for plants to continuously regulate cytokinin distribution among different organs, tissues, cells, and compartments. Such regulatory mechanisms include cytokinin biosynthesis, metabolic conversions and degradation, as well as cytokinin membrane transport. In our review, we aim to provide a thorough picture of the latter. We begin by summarizing cytokinin structures and physicochemical properties. Then, we revise the elementary thermodynamic and kinetic aspects of cytokinin membrane transport. Next, we review which membrane-bound carrier proteins and protein families recognize cytokinins as their substrates. Namely, we discuss the families of "equilibrative nucleoside transporters" and "purine permeases", which translocate diverse purine-related compounds, and proteins AtPUP14, AtABCG14, AtAZG1, and AtAZG2, which are specific to cytokinins. We also address long-distance cytokinin transport. Putting all these pieces together, we finally discuss cytokinin distribution as a net result of these processes, diverse in their physicochemical nature but acting together to promote plant fitness.
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Affiliation(s)
- Daniel Nedvěd
- The Czech Academy of Sciences, Institute of Experimental Botany, 165 02 Prague, Czech Republic; (D.N.); (P.H.)
- Department of Biochemistry, Faculty of Science, Charles University, 128 00 Prague, Czech Republic
| | - Petr Hošek
- The Czech Academy of Sciences, Institute of Experimental Botany, 165 02 Prague, Czech Republic; (D.N.); (P.H.)
| | - Petr Klíma
- The Czech Academy of Sciences, Institute of Experimental Botany, 165 02 Prague, Czech Republic; (D.N.); (P.H.)
| | - Klára Hoyerová
- The Czech Academy of Sciences, Institute of Experimental Botany, 165 02 Prague, Czech Republic; (D.N.); (P.H.)
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