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Wang H, Liu Y, Ding Y. Identifying Diagnostic Biomarkers for Autism Spectrum Disorder From Higher-order Interactions Using the PED Algorithm. Neuroinformatics 2024; 22:285-296. [PMID: 38771433 DOI: 10.1007/s12021-024-09662-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/23/2024] [Indexed: 05/22/2024]
Abstract
In the field of neuroimaging, more studies of abnormalities in brain regions of the autism spectrum disorder (ASD) usually focused on two brain regions connected, and less on abnormalities of higher-order interactions of brain regions. To explore the complex relationships of brain regions, we used the partial entropy decomposition (PED) algorithm to capture higher-order interactions by computing the higher-order dependencies of all three brain regions (triads). We proposed a method for examining the effect of individual brain regions on triads based on the PED and surrogate tests. The key triads were discovered by analyzing the effects. Further, the hypergraph modularity maximization algorithm revealed the higher-order brain structures, of which the link between right thalamus and left thalamus in ASD was more loose compared with the typical control (TC). Redundant key triad (left cerebellum crus 1 and left precuneus and right inferior occipital gyrus) exhibited a discernible attenuation in interaction in ASD, while the synergistic key triad (right cerebellum crus 1 and left postcentral gyrus and left lingual gyrus) indicated a notable decline. The results of classification model further confirmed the potential of the key triads as diagnostic biomarkers.
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Affiliation(s)
- Hao Wang
- School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - Yanting Liu
- School of Science, Jiangnan University, Wuxi, Jiangsu, China
| | - Yanrui Ding
- School of Science, Jiangnan University, Wuxi, Jiangsu, China.
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Ma Y, Zou Y, Liu X, Chen T, Kemp GJ, Gong Q, Wang S. Social intelligence mediates the protective role of resting-state brain activity in the social cognition network against social anxiety. PSYCHORADIOLOGY 2024; 4:kkae009. [PMID: 38799033 PMCID: PMC11119848 DOI: 10.1093/psyrad/kkae009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/20/2024] [Revised: 04/02/2024] [Accepted: 04/23/2024] [Indexed: 05/29/2024]
Abstract
Background Social intelligence refers to an important psychosocial skill set encompassing an array of abilities, including effective self-expression, understanding of social contexts, and acting wisely in social interactions. While there is ample evidence of its importance in various mental health outcomes, particularly social anxiety, little is known on the brain correlates underlying social intelligence and how it can mitigate social anxiety. Objective This research aims to investigate the functional neural markers of social intelligence and their relations to social anxiety. Methods Data of resting-state functional magnetic resonance imaging and behavioral measures were collected from 231 normal students aged 16 to 20 years (48% male). Whole-brain voxel-wise correlation analysis was conducted to detect the functional brain clusters related to social intelligence. Correlation and mediation analyses explored the potential role of social intelligence in the linkage of resting-state brain activities to social anxiety. Results Social intelligence was correlated with neural activities (assessed as the fractional amplitude of low-frequency fluctuations, fALFF) among two key brain clusters in the social cognition networks: negatively correlated in left superior frontal gyrus (SFG) and positively correlated in right middle temporal gyrus. Further, the left SFG fALFF was positively correlated with social anxiety; brain-personality-symptom analysis revealed that this relationship was mediated by social intelligence. Conclusion These results indicate that resting-state activities in the social cognition networks might influence a person's social anxiety via social intelligence: lower left SFG activity → higher social intelligence → lower social anxiety. These may have implication for developing neurobehavioral interventions to mitigate social anxiety.
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Affiliation(s)
- Yingqiao Ma
- Department of Radiology and Huaxi MR Research Center (HMRRC), Functional and Molecular lmaging Key Laboratory of Sichuan Province, West China Hospital, Sichuan University, Chengdu, China
| | - Yuhan Zou
- Department of Psychiatry, University of Cambridge, Cambridgeshire, United Kingdom
| | - Xiqin Liu
- Department of Radiology and Huaxi MR Research Center (HMRRC), Functional and Molecular lmaging Key Laboratory of Sichuan Province, West China Hospital, Sichuan University, Chengdu, China
| | - Taolin Chen
- Department of Radiology and Huaxi MR Research Center (HMRRC), Functional and Molecular lmaging Key Laboratory of Sichuan Province, West China Hospital, Sichuan University, Chengdu, China
- Research Unit of Psychoradiology, Chinese Academy of Medical Sciences, Chengdu, China
| | - Graham J Kemp
- Liverpool Magnetic Resonance Imaging Centre (LiMRIC) and Institute of Life Course and Medical Sciences, University of Liverpool, Liverpool L69 3BX, United Kingdom
| | - Qiyong Gong
- Department of Radiology, West China Xiamen Hospital of Sichuan University, Xiamen, China
| | - Song Wang
- Department of Radiology and Huaxi MR Research Center (HMRRC), Functional and Molecular lmaging Key Laboratory of Sichuan Province, West China Hospital, Sichuan University, Chengdu, China
- Research Unit of Psychoradiology, Chinese Academy of Medical Sciences, Chengdu, China
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Xu K, Sun Z, Qiao Z, Chen A. Diagnosing autism severity associated with physical fitness and gray matter volume in children with autism spectrum disorder: Explainable machine learning method. Complement Ther Clin Pract 2024; 54:101825. [PMID: 38169278 DOI: 10.1016/j.ctcp.2023.101825] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Revised: 12/18/2023] [Accepted: 12/29/2023] [Indexed: 01/05/2024]
Abstract
PURPOSE This study aimed to investigate the relationship between physical fitness, gray matter volume (GMV), and autism severity in children with autism spectrum disorder (ASD). Besides, we sought to diagnose autism severity associated with physical fitness and GMV using machine learning methods. METHODS Ninety children diagnosed with ASD underwent physical fitness tests, magnetic resonance imaging scans, and autism severity assessments. Diagnosis models were established using extreme gradient boosting (XGB), random forest (RF), support vector machine (SVM), and decision tree (DT) algorithms. Hyperparameters were optimized through the grid search cross-validation method. The shapley additive explanation (SHAP) method was employed to explain the diagnosis results. RESULTS Our study revealed associations between muscular strength in physical fitness and GMV in specific brain regions (left paracentral lobule, bilateral thalamus, left inferior temporal gyrus, and cerebellar vermis I-II) with autism severity in children with ASD. The accuracy (95 % confidence interval) of the XGB, RF, SVM, and DT models were 77.9 % (77.3, 78.6 %), 72.4 % (71.7, 73.2 %), 71.9 % (71.1, 72.6 %), and 66.9 % (66.2, 67.7 %), respectively. SHAP analysis revealed that muscular strength and thalamic GMV significantly influenced the decision-making process of the XGB model. CONCLUSION Machine learning methods can effectively diagnose autism severity associated with physical fitness and GMV in children with ASD. In this respect, the XGB model demonstrated excellent performance across various indicators, suggesting its potential for diagnosing autism severity.
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Affiliation(s)
- Keyun Xu
- College of Physical Education, Yangzhou University, Yangzhou, 225127, China
| | - Zhiyuan Sun
- College of Physical Education, Yangzhou University, Yangzhou, 225127, China
| | - Zhiyuan Qiao
- College of Physical Education, Yangzhou University, Yangzhou, 225127, China
| | - Aiguo Chen
- Nanjing Sport Institute, Nanjing, 210014, China.
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Ali MT, Gebreil A, ElNakieb Y, Elnakib A, Shalaby A, Mahmoud A, Sleman A, Giridharan GA, Barnes G, Elbaz AS. A personalized classification of behavioral severity of autism spectrum disorder using a comprehensive machine learning framework. Sci Rep 2023; 13:17048. [PMID: 37813914 PMCID: PMC10562430 DOI: 10.1038/s41598-023-43478-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Accepted: 09/25/2023] [Indexed: 10/11/2023] Open
Abstract
Autism Spectrum Disorder (ASD) is characterized as a neurodevelopmental disorder with a heterogeneous nature, influenced by genetics and exhibiting diverse clinical presentations. In this study, we dissect Autism Spectrum Disorder (ASD) into its behavioral components, mirroring the diagnostic process used in clinical settings. Morphological features are extracted from magnetic resonance imaging (MRI) scans, found in the publicly available dataset ABIDE II, identifying the most discriminative features that differentiate ASD within various behavioral domains. Then, each subject is categorized as having severe, moderate, or mild ASD, or typical neurodevelopment (TD), based on the behavioral domains of the Social Responsiveness Scale (SRS). Through this study, multiple artificial intelligence (AI) models are utilized for feature selection and classifying each ASD severity and behavioural group. A multivariate feature selection algorithm, investigating four different classifiers with linear and non-linear hypotheses, is applied iteratively while shuffling the training-validation subjects to find the set of cortical regions with statistically significant association with ASD. A set of six classifiers are optimized and trained on the selected set of features using 5-fold cross-validation for the purpose of severity classification for each behavioural group. Our AI-based model achieved an average accuracy of 96%, computed as the mean accuracy across the top-performing AI models for feature selection and severity classification across the different behavioral groups. The proposed AI model has the ability to accurately differentiate between the functionalities of specific brain regions, such as the left and right caudal middle frontal regions. We propose an AI-based model that dissects ASD into behavioral components. For each behavioral component, the AI-based model is capable of identifying the brain regions which are associated with ASD as well as utilizing those regions for diagnosis. The proposed system can increase the speed and accuracy of the diagnostic process and result in improved outcomes for individuals with ASD, highlighting the potential of AI in this area.
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Affiliation(s)
- Mohamed T Ali
- Bioengineering Department, University of Louisville, Louisville, KY, 40292, USA
- UT Southwestern Medical Center, UT Southwestern Medical Center, Dallas, TX, 75390, USA
| | - Ahmad Gebreil
- Bioengineering Department, University of Louisville, Louisville, KY, 40292, USA
| | - Yaser ElNakieb
- Bioengineering Department, University of Louisville, Louisville, KY, 40292, USA
- UT Southwestern Medical Center, UT Southwestern Medical Center, Dallas, TX, 75390, USA
| | - Ahmed Elnakib
- Electrical and Computer Engineering, Penn State Erie-The Behrend College, Erie, PA, 16563, USA
| | - Ahmed Shalaby
- Lyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, 75390, USA
| | - Ali Mahmoud
- Bioengineering Department, University of Louisville, Louisville, KY, 40292, USA
| | - Ahmed Sleman
- Bioengineering Department, University of Louisville, Louisville, KY, 40292, USA
| | | | - Gregory Barnes
- Department of Neurology and Pediatric Research Institute, University of Louisville, Louisville, KY, 40202, USA
| | - Ayman S Elbaz
- Bioengineering Department, University of Louisville, Louisville, KY, 40292, USA.
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Sun Z, Yuan Y, Dong X, Liu Z, Cai K, Cheng W, Wu J, Qiao Z, Chen A. Supervised machine learning: A new method to predict the outcomes following exercise intervention in children with autism spectrum disorder. Int J Clin Health Psychol 2023; 23:100409. [PMID: 37711468 PMCID: PMC10498172 DOI: 10.1016/j.ijchp.2023.100409] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 08/22/2023] [Indexed: 09/16/2023] Open
Abstract
The individual differences among children with autism spectrum disorder (ASD) may make it challenging to achieve comparable benefits from a specific exercise intervention program. A new method for predicting the possible outcomes and maximizing the benefits of exercise intervention for children with ASD needs further exploration. Using the mini-basketball training program (MBTP) studies to improve the symptom performance of children with ASD as an example, we used the supervised machine learning method to predict the possible intervention outcomes based on the individual differences of children with ASD, investigated and validated the efficacy of this method. In a long-term study, we included 41 ASD children who received the MBTP. Before the intervention, we collected their clinical information, behavioral factors, and brain structural indicators as candidate factors. To perform the regression and classification tasks, the random forest algorithm from the supervised machine learning method was selected, and the cross validation method was used to determine the reliability of the prediction results. The regression task was used to predict the social communication impairment outcome following the MBTP in children with ASD, and explainable variance was used to evaluate the predictive performance. The classification task was used to distinguish the core symptom outcome groups of ASD children, and predictive performance was assessed based on accuracy. We discovered that random forest models could predict the outcome of social communication impairment (average explained variance was 30.58%) and core symptom (average accuracy was 66.12%) following the MBTP, confirming that the supervised machine learning method can predict exercise intervention outcomes for children with ASD. Our findings provide a novel and reliable method for identifying ASD children most likely to benefit from a specific exercise intervention program in advance and a solid foundation for establishing a personalized exercise intervention program recommendation system for ASD children.
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Affiliation(s)
- Zhiyuan Sun
- College of Physical Education, Yangzhou University, Yangzhou 225127, China
- Institute of Sports, Exercise and Brain, Yangzhou University, Yangzhou 225127, China
| | - Yunhao Yuan
- School of Information Engineering, Yangzhou University, Yangzhou 225127, China
| | - Xiaoxiao Dong
- College of Physical Education, Yangzhou University, Yangzhou 225127, China
- Institute of Sports, Exercise and Brain, Yangzhou University, Yangzhou 225127, China
| | - Zhimei Liu
- College of Physical Education, Yangzhou University, Yangzhou 225127, China
- Institute of Sports, Exercise and Brain, Yangzhou University, Yangzhou 225127, China
| | - Kelong Cai
- College of Physical Education, Yangzhou University, Yangzhou 225127, China
- Institute of Sports, Exercise and Brain, Yangzhou University, Yangzhou 225127, China
| | - Wei Cheng
- College of Physical Education, Yangzhou University, Yangzhou 225127, China
- Institute of Sports, Exercise and Brain, Yangzhou University, Yangzhou 225127, China
| | - Jingjing Wu
- College of Physical Education, Yangzhou University, Yangzhou 225127, China
- Institute of Sports, Exercise and Brain, Yangzhou University, Yangzhou 225127, China
| | - Zhiyuan Qiao
- College of Physical Education, Yangzhou University, Yangzhou 225127, China
- Institute of Sports, Exercise and Brain, Yangzhou University, Yangzhou 225127, China
| | - Aiguo Chen
- College of Physical Education, Yangzhou University, Yangzhou 225127, China
- Institute of Sports, Exercise and Brain, Yangzhou University, Yangzhou 225127, China
- Nanjing Institute of Physical Education, Nanjing 210014, China
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