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Khan ZA, Waqar M, Raja MJAA, Chaudhary NI, Khan ATMA, Raja MAZ. Generalized fractional optimization-based explainable lightweight CNN model for malaria disease classification. Comput Biol Med 2024; 185:109593. [PMID: 39709870 DOI: 10.1016/j.compbiomed.2024.109593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2024] [Revised: 12/13/2024] [Accepted: 12/16/2024] [Indexed: 12/24/2024]
Abstract
Over the past few decades, machine learning and deep learning (DL) have incredibly influenced a broader range of scientific disciplines. DL-based strategies have displayed superior performance in image processing compared to conventional standard methods, especially in healthcare settings. Among the biggest threats to global public health is the fast spread of malaria. The plasmodium falciparum infection, the disease origin causes the intestinal illness. Fortunately, advances in artificial intelligence techniques have made it possible to use visual data sets to quickly and effectively diagnose malaria which has also proven to be cost and time effective. In literature, several DL approaches have previously been used with good precision but suffer from computational inefficiency and interpretability. Therefore, this research proposes a generalized fractional order-based explainable lightweight convolutional neural network model to overcome these limitations. The fractional order optimization algorithms have proven worth in terms of estimation accuracy and convergence speed for different applications. The proposed fractional order optimizer-based model offers an improved solution to malaria disease diagnosis with a percentage accuracy of 95 % using the standard NIH dataset and outperforms the existing complex models concerning speed and effectiveness. The proposed fractionally optimized lightweight CNN model has shown substantial performance on the external MP-IDB dataset and M5 test set as well by achieving a generalized test accuracy of 92 % and 90.4 % which verifies the robustness and generalizability of the proposed solution under available circumstances. Moreover, the efficacy of the proposed lightweight architecture is endorsed through evaluation metrics of precision, recall, and F1-score.
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Affiliation(s)
- Zeshan Aslam Khan
- International Graduate Institute of Artificial Intelligence, National Yunlin University of Science and Technology, 123 University Road, Section 3, Douliou, Yunlin, 64002, Taiwan.
| | - Muhammad Waqar
- International Graduate Institute of Artificial Intelligence, National Yunlin University of Science and Technology, 123 University Road, Section 3, Douliou, Yunlin, 64002, Taiwan.
| | - Muhammad Junaid Ali Asif Raja
- Department of Computer Science and Information Engineering, National Yunlin University of Science and Technology, 123 University Road, Section 3, Douliou, Yunlin, 64002, Taiwan.
| | - Naveed Ishtiaq Chaudhary
- Future Technology Research Center, National Yunlin University of Science and Technology, 123 University Road, Section 3, Douliou, Yunlin, 64002, Taiwan.
| | | | - Muhammad Asif Zahoor Raja
- Future Technology Research Center, National Yunlin University of Science and Technology, 123 University Road, Section 3, Douliou, Yunlin, 64002, Taiwan.
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Pandiaraj A, Kshirsagar PR, Thiagarajan R, Tak TK, Sivaneasan B. A Robust Malaria Cell Detection Framework Using Adaptive and Atrous Convolution-Based Recurrent Mobilenetv2 with Trans-MobileUNet + + -Based Abnormality Segmentation. JOURNAL OF IMAGING INFORMATICS IN MEDICINE 2024:10.1007/s10278-024-01311-7. [PMID: 39633208 DOI: 10.1007/s10278-024-01311-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Revised: 10/16/2024] [Accepted: 10/17/2024] [Indexed: 12/07/2024]
Abstract
The highly contagious malaria disease is spread by the female Anopheles mosquito. This disease results in a patient's death or incapacity to move their muscles, if it is not appropriately identified in the early stages. A Rapid Diagnostic Test (RDT) is a frequently used approach to find malaria cells in red blood cells. However, it might not be able to identify infections with small amounts of samples. In the microscopic detection model, blood stains are placed under a microscope for diagnosing malaria. But accurate diagnosis is hard in this method, particularly in developing nations where the disease is most common. The microscopic detection processes are expensive and time-consuming due to the usage of microscopes. The quality of the blood smears and the availability of a qualified specialist, who is skilled in recognizing the disease, impact the accuracy of malaria detection results. The traditional deep learning-based malaria identification models need more processing power. Therefore, a deep learning-based adaptive method is designed to detect malaria cells through the medical image. Hence, the images are gathered from the standard sites and then fed to the segmentation process. Here, the abnormality segmentation is carried out with the help of a developed Trans-MobileUNet + + (T-MUnet + +) network. Trans-MobileUNet + + captures global context, so it is well-suited for segmentation tasks. The segmented image is applied to the adaptive detection phase where the Adaptive and Atrous Convolution-based Recurrent MobilenetV2 (AA-CRMV2) model is designed for the effective recognition of malaria cells. The efficiency of the designed approach is elevated by optimizing the parameters from the AA-CRMV2 network with the help of the Updated Random Parameter-based Fennec Fox Optimization (URP-FFO) algorithm. Several experimental analyses are evaluated in the implemented model over classical techniques to display their effectualness rate.
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Affiliation(s)
- A Pandiaraj
- Department of Computing Technologies, School of Computing, SRM Institute of Science and Technology, Kattankulathur, Chennai, Tamil Nadu, 603203, India.
| | | | - R Thiagarajan
- Department of Information Technology, Prathyusha Engineering College, Periyamet, Chennai, Tamil Nadu, 600007, India
| | - Tan Kuan Tak
- Engineering Cluster, Singapore Institute of Technology, Singapore, Singapore
| | - B Sivaneasan
- Engineering Cluster, Singapore Institute of Technology, Singapore, Singapore
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Otesteanu CF, Caldelari R, Heussler V, Sznitman R. Machine learning for predicting Plasmodium liver stage development in vitro using microscopy imaging. Comput Struct Biotechnol J 2024; 24:334-342. [PMID: 38690550 PMCID: PMC11059334 DOI: 10.1016/j.csbj.2024.04.029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2023] [Revised: 04/09/2024] [Accepted: 04/10/2024] [Indexed: 05/02/2024] Open
Abstract
Malaria, a significant global health challenge, is caused by Plasmodium parasites. The Plasmodium liver stage plays a pivotal role in the establishment of the infection. This study focuses on the liver stage development of the model organism Plasmodium berghei, employing fluorescent microscopy imaging and convolutional neural networks (CNNs) for analysis. Convolutional neural networks have been recently proposed as a viable option for tasks such as malaria detection, prediction of host-pathogen interactions, or drug discovery. Our research aimed to predict the transition of Plasmodium-infected liver cells to the merozoite stage, a key development phase, 15 hours in advance. We collected and analyzed hourly imaging data over a span of at least 38 hours from 400 sequences, encompassing 502 parasites. Our method was compared to human annotations to validate its efficacy. Performance metrics, including the area under the receiver operating characteristic curve (AUC), sensitivity, and specificity, were evaluated on an independent test dataset. The outcomes revealed an AUC of 0.873, a sensitivity of 84.6%, and a specificity of 83.3%, underscoring the potential of our CNN-based framework to predict liver stage development of P. berghei. These findings not only demonstrate the feasibility of our methodology but also could potentially contribute to the broader understanding of parasite biology.
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Affiliation(s)
- Corin F. Otesteanu
- Artificial Intelligence in Medicine group, University of Bern, Switzerland
| | - Reto Caldelari
- Institute of Cell Biology, University of Bern, Switzerland
| | | | - Raphael Sznitman
- Artificial Intelligence in Medicine group, University of Bern, Switzerland
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Zhang Z, Ding C, Zhang M, Luo Y, Mai J. DCDLN: A densely connected convolutional dynamic learning network for malaria disease diagnosis. Neural Netw 2024; 176:106339. [PMID: 38703420 DOI: 10.1016/j.neunet.2024.106339] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2023] [Revised: 03/26/2024] [Accepted: 04/23/2024] [Indexed: 05/06/2024]
Abstract
Malaria is a significant health concern worldwide, particularly in Africa where its prevalence is still alarmingly high. Using artificial intelligence algorithms to diagnose cells with malaria provides great convenience for clinicians. In this paper, a densely connected convolutional dynamic learning network (DCDLN) is proposed for the diagnosis of malaria disease. Specifically, after data processing and partitioning of the dataset, the densely connected block is trained as a feature extractor. To classify the features extracted by the feature extractor, a classifier based on a dynamic learning network is proposed in this paper. Based on experimental results, the proposed DCDLN method demonstrates a diagnostic accuracy rate of 97.23%, surpassing the diagnostic performance than existing advanced methods on an open malaria cell dataset. This accurate diagnostic effect provides convincing evidence for clinicians to make a correct diagnosis. In addition, to validate the superiority and generalization capability of the DCDLN algorithm, we also applied the algorithm to the skin cancer and garbage classification datasets. DCDLN achieved good results on these datasets as well, demonstrating that the DCDLN algorithm possesses superiority and strong generalization performance.
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Affiliation(s)
- Zhijun Zhang
- School of Automation Science and Engineering, South China University of Technology, China; College of Computer Science and Engineering, Jishou University, Jishou, China; School of Automation, Guangdong University of Petrochemical Technology, Maoming, China; Guangdong Artificial Intelligence and Digital Economy Laboratory (Pazhou Lab), Guangzhou, China; Shaanxi Provincial Key Laboratory of Industrial Automation, School of Mechanical Engineering, Shaanxi University of Technology, Hanzhong, China; School of Information Technology and Management, Hunan University of Finance and Economics, Changsha, China.
| | - Cheng Ding
- School of Automation Science and Engineering, South China University of Technology, China.
| | - Mingyang Zhang
- School of Automation Science and Engineering, South China University of Technology, China.
| | - YaMei Luo
- School of Automation Science and Engineering, South China University of Technology, China.
| | - Jiajie Mai
- City University of HongKong, Hongkong, China.
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Ramos JDS, Vieira IHP, Rocha WS, Esquerdo RP, Watanabe CYV, Zanchi FB. A transfer learning approach to identify Plasmodium in microscopic images. PLoS Comput Biol 2024; 20:e1012327. [PMID: 39102445 PMCID: PMC11326699 DOI: 10.1371/journal.pcbi.1012327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Revised: 08/15/2024] [Accepted: 07/15/2024] [Indexed: 08/07/2024] Open
Abstract
Plasmodium parasites cause Malaria disease, which remains a significant threat to global health, affecting 200 million people and causing 400,000 deaths yearly. Plasmodium falciparum and Plasmodium vivax remain the two main malaria species affecting humans. Identifying the malaria disease in blood smears requires years of expertise, even for highly trained specialists. Literature studies have been coping with the automatic identification and classification of malaria. However, several points must be addressed and investigated so these automatic methods can be used clinically in a Computer-aided Diagnosis (CAD) scenario. In this work, we assess the transfer learning approach by using well-known pre-trained deep learning architectures. We considered a database with 6222 Region of Interest (ROI), of which 6002 are from the Broad Bioimage Benchmark Collection (BBBC), and 220 were acquired locally by us at Fundação Oswaldo Cruz (FIOCRUZ) in Porto Velho Velho, Rondônia-Brazil, which is part of the legal Amazon. We exhaustively cross-validated the dataset using 100 distinct partitions with 80% train and 20% test for each considering circular ROIs (rough segmentation). Our experimental results show that DenseNet201 has a potential to identify Plasmodium parasites in ROIs (infected or uninfected) of microscopic images, achieving 99.41% AUC with a fast processing time. We further validated our results, showing that DenseNet201 was significantly better (99% confidence interval) than the other networks considered in the experiment. Our results support claiming that transfer learning with texture features potentially differentiates subjects with malaria, spotting those with Plasmodium even in Leukocytes images, which is a challenge. In Future work, we intend scale our approach by adding more data and developing a friendly user interface for CAD use. We aim at aiding the worldwide population and our local natives living nearby the legal Amazon's rivers.
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Affiliation(s)
- Jonathan da Silva Ramos
- Computer Science Department, Federal University of Rondônia (DACC/UNIR), Porto Velho, Rondônia, Brazil
| | - Ivo Henrique Provensi Vieira
- Laboratório de Bioinformática e Química Medicinal, Fundação Oswaldo Cruz Rondônia, Porto Velho, Rondônia, Brazil
- Instituto Nacional de Epidemiologia na Amazônia Ocidental (INCT-EPIAMO), Porto Velho, Rondônia, Brazil
| | - Wan Song Rocha
- Instituto Nacional de Epidemiologia na Amazônia Ocidental (INCT-EPIAMO), Porto Velho, Rondônia, Brazil
- Programa de Pós-Graduação em Biologia Experimental, Universidade Federal de Rondônia (PGBIOEXP/UNIR), Porto Velho, Rondônia, Brazil
| | - Rosimar Pires Esquerdo
- Laboratório de Bioinformática e Química Medicinal, Fundação Oswaldo Cruz Rondônia, Porto Velho, Rondônia, Brazil
| | | | - Fernando Berton Zanchi
- Laboratório de Bioinformática e Química Medicinal, Fundação Oswaldo Cruz Rondônia, Porto Velho, Rondônia, Brazil
- Instituto Nacional de Epidemiologia na Amazônia Ocidental (INCT-EPIAMO), Porto Velho, Rondônia, Brazil
- Programa de Pós-Graduação em Biologia Experimental, Universidade Federal de Rondônia (PGBIOEXP/UNIR), Porto Velho, Rondônia, Brazil
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Mujahid M, Rustam F, Shafique R, Montero EC, Alvarado ES, de la Torre Diez I, Ashraf I. Efficient deep learning-based approach for malaria detection using red blood cell smears. Sci Rep 2024; 14:13249. [PMID: 38858481 PMCID: PMC11164904 DOI: 10.1038/s41598-024-63831-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Accepted: 06/03/2024] [Indexed: 06/12/2024] Open
Abstract
Malaria is an extremely malignant disease and is caused by the bites of infected female mosquitoes. This disease is not only infectious among humans, but among animals as well. Malaria causes mild symptoms like fever, headache, sweating and vomiting, and muscle discomfort; severe symptoms include coma, seizures, and kidney failure. The timely identification of malaria parasites is a challenging and chaotic endeavor for health staff. An expert technician examines the schematic blood smears of infected red blood cells through a microscope. The conventional methods for identifying malaria are not efficient. Machine learning approaches are effective for simple classification challenges but not for complex tasks. Furthermore, machine learning involves rigorous feature engineering to train the model and detect patterns in the features. On the other hand, deep learning works well with complex tasks and automatically extracts low and high-level features from the images to detect disease. In this paper, EfficientNet, a deep learning-based approach for detecting Malaria, is proposed that uses red blood cell images. Experiments are carried out and performance comparison is made with pre-trained deep learning models. In addition, k-fold cross-validation is also used to substantiate the results of the proposed approach. Experiments show that the proposed approach is 97.57% accurate in detecting Malaria from red blood cell images and can be beneficial practically for medical healthcare staff.
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Affiliation(s)
- Muhammad Mujahid
- Artificial Intelligence and Data Analytics (AIDA) Lab, CCIS, Prince Sultan University, 11586, Riyadh, Saudi Arabia
| | - Furqan Rustam
- School of Computer Science, University College Dublin, Dublin, D04 V1W8, Ireland
| | - Rahman Shafique
- Department of Information and Communication Engineering, Yeungnam University, Gyeongsan, 38541, Republic of Korea
| | - Elizabeth Caro Montero
- Universidad Europea del Atlantico, 39011, Santander, Spain
- Universidad Internacional Iberoamericana Arecibo, Puerto Rico, 00613, USA
- Universidade Internacional do Cuanza, Cuito, EN250, Angola
| | - Eduardo Silva Alvarado
- Universidad Europea del Atlantico, 39011, Santander, Spain
- Universidad Internacional Iberoamericana, 24560, Campeche, Mexico
- Universidad de La Romana, La Romana, República Dominicana
| | - Isabel de la Torre Diez
- Department of Signal Theory, Communications and Telematics Engineering, University of Valladolid, 47011, Valladolid, Spain
| | - Imran Ashraf
- Department of Information and Communication Engineering, Yeungnam University, Gyeongsan, 38541, Republic of Korea.
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7
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Saha A, Ganie SM, Dutta Pramanik PK, Yadav RK, Mallik S, Zhao Z. Correction: VER-Net: a hybrid transfer learning model for lung cancer detection using CT scan images. BMC Med Imaging 2024; 24:128. [PMID: 38822231 PMCID: PMC11140995 DOI: 10.1186/s12880-024-01315-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/02/2024] Open
Affiliation(s)
- Anindita Saha
- Department of Computing Science and Engineering, IFTM University, Moradabad, Uttar Pradesh, India
| | - Shahid Mohammad Ganie
- AI Research Centre, Department of Analytics, School of Business, Woxsen University, Hyderabad, Telangana, 502345, India
| | - Pijush Kanti Dutta Pramanik
- School of Computer Applications and Technology, Galgotias University, Greater Noida, Uttar Pradesh, 203201, India.
| | - Rakesh Kumar Yadav
- Department of Computer Science & Engineering, MSOET, Maharishi University of Information Technology, Lucknow, Uttar Pradesh, India
| | - Saurav Mallik
- Department of Environmental Health, Harvard T. H. Chan School of Public Health, Boston, MA, USA
| | - Zhongming Zhao
- Center for Precision Health, McWilliams School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.
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Saha A, Ganie SM, Pramanik PKD, Yadav RK, Mallik S, Zhao Z. VER-Net: a hybrid transfer learning model for lung cancer detection using CT scan images. BMC Med Imaging 2024; 24:120. [PMID: 38789925 PMCID: PMC11127393 DOI: 10.1186/s12880-024-01238-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Accepted: 03/05/2024] [Indexed: 05/26/2024] Open
Abstract
BACKGROUND Lung cancer is the second most common cancer worldwide, with over two million new cases per year. Early identification would allow healthcare practitioners to handle it more effectively. The advancement of computer-aided detection systems significantly impacted clinical analysis and decision-making on human disease. Towards this, machine learning and deep learning techniques are successfully being applied. Due to several advantages, transfer learning has become popular for disease detection based on image data. METHODS In this work, we build a novel transfer learning model (VER-Net) by stacking three different transfer learning models to detect lung cancer using lung CT scan images. The model is trained to map the CT scan images with four lung cancer classes. Various measures, such as image preprocessing, data augmentation, and hyperparameter tuning, are taken to improve the efficacy of VER-Net. All the models are trained and evaluated using multiclass classifications chest CT images. RESULTS The experimental results confirm that VER-Net outperformed the other eight transfer learning models compared with. VER-Net scored 91%, 92%, 91%, and 91.3% when tested for accuracy, precision, recall, and F1-score, respectively. Compared to the state-of-the-art, VER-Net has better accuracy. CONCLUSION VER-Net is not only effectively used for lung cancer detection but may also be useful for other diseases for which CT scan images are available.
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Affiliation(s)
- Anindita Saha
- Department of Computing Science and Engineering, IFTM University, Moradabad, Uttar Pradesh, India
| | - Shahid Mohammad Ganie
- AI Research Centre, Department of Analytics, School of Business, Woxsen University, Hyderabad, Telangana, 502345, India
| | - Pijush Kanti Dutta Pramanik
- School of Computer Applications and Technology, Galgotias University, Greater Noida, Uttar Pradesh, 203201, India.
| | - Rakesh Kumar Yadav
- Department of Computer Science & Engineering, MSOET, Maharishi University of Information Technology, Lucknow, Uttar Pradesh, India
| | - Saurav Mallik
- Department of Environmental Health, Harvard T. H. Chan School of Public Health, Boston, MA, USA
| | - Zhongming Zhao
- Center for Precision Health, McWilliams School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.
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Alsulimani A, Akhter N, Jameela F, Ashgar RI, Jawed A, Hassani MA, Dar SA. The Impact of Artificial Intelligence on Microbial Diagnosis. Microorganisms 2024; 12:1051. [PMID: 38930432 PMCID: PMC11205376 DOI: 10.3390/microorganisms12061051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Revised: 05/19/2024] [Accepted: 05/21/2024] [Indexed: 06/28/2024] Open
Abstract
Traditional microbial diagnostic methods face many obstacles such as sample handling, culture difficulties, misidentification, and delays in determining susceptibility. The advent of artificial intelligence (AI) has markedly transformed microbial diagnostics with rapid and precise analyses. Nonetheless, ethical considerations accompany AI adoption, necessitating measures to uphold patient privacy, mitigate biases, and ensure data integrity. This review examines conventional diagnostic hurdles, stressing the significance of standardized procedures in sample processing. It underscores AI's significant impact, particularly through machine learning (ML), in microbial diagnostics. Recent progressions in AI, particularly ML methodologies, are explored, showcasing their influence on microbial categorization, comprehension of microorganism interactions, and augmentation of microscopy capabilities. This review furnishes a comprehensive evaluation of AI's utility in microbial diagnostics, addressing both advantages and challenges. A few case studies including SARS-CoV-2, malaria, and mycobacteria serve to illustrate AI's potential for swift and precise diagnosis. Utilization of convolutional neural networks (CNNs) in digital pathology, automated bacterial classification, and colony counting further underscores AI's versatility. Additionally, AI improves antimicrobial susceptibility assessment and contributes to disease surveillance, outbreak forecasting, and real-time monitoring. Despite a few limitations, integration of AI in diagnostic microbiology presents robust solutions, user-friendly algorithms, and comprehensive training, promising paradigm-shifting advancements in healthcare.
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Affiliation(s)
- Ahmad Alsulimani
- Medical Laboratory Technology Department, College of Applied Medical Sciences, Jazan University, Jazan 45142, Saudi Arabia; (A.A.); (M.A.H.)
| | - Naseem Akhter
- Department of Biology, Arizona State University, Lake Havasu City, AZ 86403, USA;
| | - Fatima Jameela
- Modern American Dental Clinic, West Warren Avenue, Dearborn, MI 48126, USA;
| | - Rnda I. Ashgar
- College of Nursing, Jazan University, Jazan 45142, Saudi Arabia; (R.I.A.); (A.J.)
| | - Arshad Jawed
- College of Nursing, Jazan University, Jazan 45142, Saudi Arabia; (R.I.A.); (A.J.)
| | - Mohammed Ahmed Hassani
- Medical Laboratory Technology Department, College of Applied Medical Sciences, Jazan University, Jazan 45142, Saudi Arabia; (A.A.); (M.A.H.)
| | - Sajad Ahmad Dar
- College of Nursing, Jazan University, Jazan 45142, Saudi Arabia; (R.I.A.); (A.J.)
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Baddal B, Taner F, Uzun Ozsahin D. Harnessing of Artificial Intelligence for the Diagnosis and Prevention of Hospital-Acquired Infections: A Systematic Review. Diagnostics (Basel) 2024; 14:484. [PMID: 38472956 DOI: 10.3390/diagnostics14050484] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Revised: 01/23/2024] [Accepted: 02/19/2024] [Indexed: 03/14/2024] Open
Abstract
Healthcare-associated infections (HAIs) are the most common adverse events in healthcare and constitute a major global public health concern. Surveillance represents the foundation for the effective prevention and control of HAIs, yet conventional surveillance is costly and labor intensive. Artificial intelligence (AI) and machine learning (ML) have the potential to support the development of HAI surveillance algorithms for the understanding of HAI risk factors, the improvement of patient risk stratification as well as the prediction and timely detection and prevention of infections. AI-supported systems have so far been explored for clinical laboratory testing and imaging diagnosis, antimicrobial resistance profiling, antibiotic discovery and prediction-based clinical decision support tools in terms of HAIs. This review aims to provide a comprehensive summary of the current literature on AI applications in the field of HAIs and discuss the future potentials of this emerging technology in infection practice. Following the PRISMA guidelines, this study examined the articles in databases including PubMed and Scopus until November 2023, which were screened based on the inclusion and exclusion criteria, resulting in 162 included articles. By elucidating the advancements in the field, we aim to highlight the potential applications of AI in the field, report related issues and shortcomings and discuss the future directions.
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Affiliation(s)
- Buket Baddal
- Department of Medical Microbiology and Clinical Microbiology, Faculty of Medicine, Near East University, North Cyprus, Mersin 10, 99138 Nicosia, Turkey
- DESAM Research Institute, Near East University, North Cyprus, Mersin 10, 99138 Nicosia, Turkey
| | - Ferdiye Taner
- Department of Medical Microbiology and Clinical Microbiology, Faculty of Medicine, Near East University, North Cyprus, Mersin 10, 99138 Nicosia, Turkey
- DESAM Research Institute, Near East University, North Cyprus, Mersin 10, 99138 Nicosia, Turkey
| | - Dilber Uzun Ozsahin
- Department of Medical Diagnostic Imaging, College of Health Science, University of Sharjah, Sharjah 27272, United Arab Emirates
- Research Institute for Medical and Health Sciences, University of Sharjah, Sharjah 27272, United Arab Emirates
- Operational Research Centre in Healthcare, Near East University, North Cyprus, Mersin 10, 99138 Nicosia, Turkey
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11
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Amin J, Almas Anjum M, Ahmad A, Sharif MI, Kadry S, Kim J. Microscopic parasite malaria classification using best feature selection based on generalized normal distribution optimization. PeerJ Comput Sci 2024; 10:e1744. [PMID: 38196949 PMCID: PMC10773915 DOI: 10.7717/peerj-cs.1744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2023] [Accepted: 11/16/2023] [Indexed: 01/11/2024]
Abstract
Malaria disease can indeed be fatal if not identified and treated promptly. Due to advancements in the malaria diagnostic process, microscopy techniques are employed for blood cell analysis. Unfortunately, the diagnostic process of malaria via microscopy depends on microscopic skills. To overcome such issues, machine/deep learning algorithms can be proposed for more accurate and efficient detection of malaria. Therefore, a method is proposed for classifying malaria parasites that consist of three phases. The bilateral filter is applied to enhance image quality. After that shape-based and deep features are extracted. In shape-based pyramid histograms of oriented gradients (PHOG) features are derived with the dimension of N × 300. Deep features are derived from the residual network (ResNet)-50, and ResNet-18 at fully connected layers having the dimension of N × 1,000 respectively. The features obtained are fused serially, resulting in a dimensionality of N × 2,300. From this set, N × 498 features are chosen using the generalized normal distribution optimization (GNDO) method. The proposed method is accessed on a microscopic malarial parasite imaging dataset providing 99% classification accuracy which is better than as compared to recently published work.
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Affiliation(s)
- Javeria Amin
- University of Wah, Department of Computer Science, Wah Cantt, Pakistan
| | | | - Abraz Ahmad
- University of Wah, Department of Computer Science, Wah Cantt, Pakistan
| | - Muhammad Irfan Sharif
- Department of Information Sciences, University of Education Lahore, Jauharabad Campus, Jauharabad, Pakistan
| | - Seifedine Kadry
- Noroff University College, Kristiansand, Norway
- Artificial Intelligence Research Center (AIRC), Ajman University, Ajman, UAE
- MEU Research Unit, Middle East University, Amman, Jordan
- Department of Electrical and Computer Engineering, Lebanese American University, Byblos, Lebanon
| | - Jungeun Kim
- Department of Software, Kongju National University, Cheonan, Korea
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Application of Machine Learning for Cardiovascular Disease Risk Prediction. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2023. [DOI: 10.1155/2023/9418666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/05/2023]
Abstract
Cardiovascular diseases (CVDs) are a common cause of heart failure globally. The need to explore possible ways to tackle the disease necessitated this study. The study designed a machine learning model for cardiovascular disease risk prediction in accordance with a dataset that contains 11 features which may be used to forecast the disease. The dataset from Kaggle on cardiovascular disease includes approximately 70,000 patient records that were used to determine the outcome. Compared to the UCI dataset, the Kaggle dataset has many more training and validation records. Models created using neural networks, random forests, Bayesian networks, C5.0, and QUEST were compared for this dataset. On training and testing data sets, the results acquired a high accuracy (99.1 percent), which is significantly superior to previous methods. Ahead-of-time detection and diagnosis of cardiac disease, as well as better treatment outcomes, are strong possibilities for the suggested prediction model. Additionally, it may help patients better manage their illness or life forms in order to increase their chances of recovery/survival. The result showed greater accuracy and promising signs that machine-learning algorithms can indeed assist in early identification of the disease and improvement of the treatment outcome.
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