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Bernal Oñate CP, Melgarejo Meseguer FM, Carrera EV, Sánchez Muñoz JJ, García Alberola A, Rojo Álvarez JL. Different Ventricular Fibrillation Types in Low-Dimensional Latent Spaces. SENSORS (BASEL, SWITZERLAND) 2023; 23:2527. [PMID: 36904731 PMCID: PMC10006875 DOI: 10.3390/s23052527] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/24/2022] [Revised: 02/08/2023] [Accepted: 02/13/2023] [Indexed: 06/18/2023]
Abstract
The causes of ventricular fibrillation (VF) are not yet elucidated, and it has been proposed that different mechanisms might exist. Moreover, conventional analysis methods do not seem to provide time or frequency domain features that allow for recognition of different VF patterns in electrode-recorded biopotentials. The present work aims to determine whether low-dimensional latent spaces could exhibit discriminative features for different mechanisms or conditions during VF episodes. For this purpose, manifold learning using autoencoder neural networks was analyzed based on surface ECG recordings. The recordings covered the onset of the VF episode as well as the next 6 min, and comprised an experimental database based on an animal model with five situations, including control, drug intervention (amiodarone, diltiazem, and flecainide), and autonomic nervous system blockade. The results show that latent spaces from unsupervised and supervised learning schemes yielded moderate though quite noticeable separability among the different types of VF according to their type or intervention. In particular, unsupervised schemes reached a multi-class classification accuracy of 66%, while supervised schemes improved the separability of the generated latent spaces, providing a classification accuracy of up to 74%. Thus, we conclude that manifold learning schemes can provide a valuable tool for studying different types of VF while working in low-dimensional latent spaces, as the machine-learning generated features exhibit separability among different VF types. This study confirms that latent variables are better VF descriptors than conventional time or domain features, making this technique useful in current VF research on elucidation of the underlying VF mechanisms.
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Affiliation(s)
- Carlos Paúl Bernal Oñate
- Departamento de Eléctrica, Electrónica y Telecomunicaciones, Universidad de las Fuerzas Armadas—ESPE, Sangolqui 171103, Ecuador
| | | | - Enrique V. Carrera
- Departamento de Eléctrica, Electrónica y Telecomunicaciones, Universidad de las Fuerzas Armadas—ESPE, Sangolqui 171103, Ecuador
| | | | | | - José Luis Rojo Álvarez
- Department of Signal Theory and Communications, Telematics and Computing Systems, Universidad Rey Juan Carlos, 28943 Madrid, Spain
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Coult J, Rea TD, Blackwood J, Kudenchuk PJ, Liu C, Kwok H. A method to predict ventricular fibrillation shock outcome during chest compressions. Comput Biol Med 2020; 129:104136. [PMID: 33278632 DOI: 10.1016/j.compbiomed.2020.104136] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Revised: 11/11/2020] [Accepted: 11/18/2020] [Indexed: 12/22/2022]
Abstract
BACKGROUND Out-of-hospital ventricular fibrillation (VF) cardiac arrest is a leading cause of death. Quantitative analysis of the VF electrocardiogram (ECG) can predict patient outcomes and could potentially enable a patient-specific, guided approach to resuscitation. However, VF analysis during resuscitation is confounded by cardiopulmonary resuscitation (CPR) artifact in the ECG, challenging continuous application to guide therapy throughout resuscitation. We therefore sought to design a method to predict VF shock outcomes during CPR. METHODS Study data included 4577 5-s VF segments collected during and without CPR prior to defibrillation attempts in N = 1151 arrest patients. Using training data (460 patients), an algorithm was designed to predict the VF shock outcomes of defibrillation success (return of organized ventricular rhythm) and functional survival (Cerebral Performance Category 1-2). The algorithm was designed with variable-frequency notch filters to reduce CPR artifact in the ECG based on real-time chest compression rate. Ten ECG features and three dichotomous patient characteristics were developed to predict outcomes. These variables were combined using support vector machines and logistic regression. Algorithm performance was evaluated by area under the receiver operating characteristic curve (AUC) to predict outcomes in validation data (691 patients). RESULTS AUC (95% Confidence Interval) for predicting defibrillation success was 0.74 (0.71-0.77) during CPR and 0.77 (0.74-0.79) without CPR. AUC for predicting functional survival was 0.75 (0.72-0.78) during CPR and 0.76 (0.74-0.79) without CPR. CONCLUSION A novel algorithm predicted defibrillation success and functional survival during ongoing CPR following VF arrest, providing a potential proof-of-concept towards real-time guidance of resuscitation therapy.
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Affiliation(s)
- Jason Coult
- Department of Medicine, University of Washington, Seattle, WA, USA; Center for Progress in Resuscitation, University of Washington, Seattle, WA, USA.
| | - Thomas D Rea
- Department of Medicine, University of Washington, Seattle, WA, USA; Center for Progress in Resuscitation, University of Washington, Seattle, WA, USA; King County Emergency Medical Services, Public Health, Seattle & King County, Seattle, WA, USA
| | - Jennifer Blackwood
- Center for Progress in Resuscitation, University of Washington, Seattle, WA, USA; King County Emergency Medical Services, Public Health, Seattle & King County, Seattle, WA, USA
| | - Peter J Kudenchuk
- Department of Medicine, University of Washington, Seattle, WA, USA; Center for Progress in Resuscitation, University of Washington, Seattle, WA, USA; King County Emergency Medical Services, Public Health, Seattle & King County, Seattle, WA, USA
| | - Chenguang Liu
- Philips Emergency Care & Resuscitation, Bothell, WA, USA
| | - Heemun Kwok
- Center for Progress in Resuscitation, University of Washington, Seattle, WA, USA; Department of Emergency Medicine, University of Washington, Seattle, WA, USA
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Isasi I, Irusta U, Aramendi E, Idris AH, Sörnmo L. Restoration of the electrocardiogram during mechanical cardiopulmonary resuscitation. Physiol Meas 2020; 41:105006. [DOI: 10.1088/1361-6579/ab9e53] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Manibardo E, Irusta U, Ser JD, Aramendi E, Isasi I, Olabarria M, Corcuera C, Veintemillas J, Larrea A. ECG-based Random Forest Classifier for Cardiac Arrest Rhythms. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2020; 2019:1504-1508. [PMID: 31946179 DOI: 10.1109/embc.2019.8857893] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Rhythm annotation of out-of-hospital cardiac episodes (OHCA) is key for a better understanding of the interplay between resuscitation therapy and OHCA patient outcome. OHCA rhythms are classified in five categories, asystole (AS), pulseless electrical activity (PEA), pulsed rhythms (PR), ventricular fibrillation (VF) and ventricular tachycardia (VT). Manual OHCA annotation by expert clinicians is onerous and time consuming, so there is a need for accurate and automatic OHCA rhythm annotation methods. For this study 852 OHCA episodes of patients treated with Automated External Defibrillators (AED) by the Emergency Medical Services of the Basque Country were analyzed. Six expert clinicians reviewed the electrocardiogram (ECG) of 4214 AED rhythm analyses and annotated the rhythm. Their consensus decision was used as ground truth. There were a total of 2418 AS, 294 PR, 1008 PEA, 472 VF and 22 VT. The ECG analysis intervals were extracted and used to develop an automatic rhythm annotator. Data was partitioned patient-wise into training (70%) and test (30%). Performance was evaluated in terms of per class sensitivity (Se) and F-score (F1). The unweighted mean of sensitivity (UMS) and F-score were used as global performance metrics. The classification method is composed of a feature extraction and denoising stage based on the stationary wavelet transform of the ECG, and on a random forest classifier. The best model presented a per rhythm Se/F1 of 95.8/95.7, 43.3/52.2, 85.3/81.3, 94.2/96.1, 81.9/72.2 for AS, PR, PEA, VF and VT, respectively. The UMS for the test set was 80.2%, 2-points above that of previous solutions. This method could be used to retrospectively annotate large OHCA datasets and ameliorate the workload of manual OHCA rhythm annotation.
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Picon A, Irusta U, Álvarez-Gila A, Aramendi E, Alonso-Atienza F, Figuera C, Ayala U, Garrote E, Wik L, Kramer-Johansen J, Eftestøl T. Mixed convolutional and long short-term memory network for the detection of lethal ventricular arrhythmia. PLoS One 2019; 14:e0216756. [PMID: 31107876 PMCID: PMC6527215 DOI: 10.1371/journal.pone.0216756] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2019] [Accepted: 04/26/2019] [Indexed: 11/29/2022] Open
Abstract
Early defibrillation by an automated external defibrillator (AED) is key for the survival of out-of-hospital cardiac arrest (OHCA) patients. ECG feature extraction and machine learning have been successfully used to detect ventricular fibrillation (VF) in AED shock decision algorithms. Recently, deep learning architectures based on 1D Convolutional Neural Networks (CNN) have been proposed for this task. This study introduces a deep learning architecture based on 1D-CNN layers and a Long Short-Term Memory (LSTM) network for the detection of VF. Two datasets were used, one from public repositories of Holter recordings captured at the onset of the arrhythmia, and a second from OHCA patients obtained minutes after the onset of the arrest. Data was partitioned patient-wise into training (80%) to design the classifiers, and test (20%) to report the results. The proposed architecture was compared to 1D-CNN only deep learners, and to a classical approach based on VF-detection features and a support vector machine (SVM) classifier. The algorithms were evaluated in terms of balanced accuracy (BAC), the unweighted mean of the sensitivity (Se) and specificity (Sp). The BAC, Se, and Sp of the architecture for 4-s ECG segments was 99.3%, 99.7%, and 98.9% for the public data, and 98.0%, 99.2%, and 96.7% for OHCA data. The proposed architecture outperformed all other classifiers by at least 0.3-points in BAC in the public data, and by 2.2-points in the OHCA data. The architecture met the 95% Sp and 90% Se requirements of the American Heart Association in both datasets for segment lengths as short as 3-s. This is, to the best of our knowledge, the most accurate VF detection algorithm to date, especially on OHCA data, and it would enable an accurate shock no shock diagnosis in a very short time.
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Affiliation(s)
- Artzai Picon
- Computer Vision Group, Tecnalia Research & Innovation, Derio, Spain
| | - Unai Irusta
- Department of Communications Engineering, University of the Basque Country UPV/EHU, Bilbao, Spain
| | | | - Elisabete Aramendi
- Department of Communications Engineering, University of the Basque Country UPV/EHU, Bilbao, Spain
| | - Felipe Alonso-Atienza
- Department of Signal Theory and Communications, Rey Juan Carlos University, Madrid, Spain
- Client Solutions Advanced Analytics, BBVA, Madrid, Spain
| | - Carlos Figuera
- Department of Signal Theory and Communications, Rey Juan Carlos University, Madrid, Spain
- Client Solutions Advanced Analytics, BBVA, Madrid, Spain
| | - Unai Ayala
- Electronics and Computing Department, Mondragon Unibertsitatea, Faculty of Engineering (MU-ENG), Mondragón, Spain
| | | | - Lars Wik
- Norwegian National Advisory Unit on Prehospital Emergency Medicine (NAKOS), Oslo University Hospital and University of Oslo, Oslo, Norway
| | - Jo Kramer-Johansen
- Norwegian National Advisory Unit on Prehospital Emergency Medicine (NAKOS), Oslo University Hospital and University of Oslo, Oslo, Norway
| | - Trygve Eftestøl
- Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway
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Chicote B, Aramendi E, Irusta U, Owens P, Daya M, Idris A. Value of capnography to predict defibrillation success in out-of-hospital cardiac arrest. Resuscitation 2019; 138:74-81. [PMID: 30836170 PMCID: PMC6504568 DOI: 10.1016/j.resuscitation.2019.02.028] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2018] [Revised: 02/12/2019] [Accepted: 02/18/2019] [Indexed: 11/21/2022]
Abstract
BACKGROUND AND AIM Unsuccessful defibrillation shocks adversely affect survival from out-of-hospital cardiac arrest (OHCA). Ventricular fibrillation (VF) waveform analysis is the tool-of-choice for the non-invasive prediction of shock success, but surrogate markers of perfusion like end-tidal CO2 (EtCO2) could improve the prediction. The aim of this study was to evaluate EtCO2 as predictor of shock success, both individually and in combination with VF-waveform analysis. MATERIALS AND METHODS In total 514 shocks from 214 OHCA patients (75 first shocks) were analysed. For each shock three predictors of defibrillation success were automatically calculated from the device files: two VF-waveform features, amplitude spectrum area (AMSA) and fuzzy entropy (FuzzyEn), and the median EtCO2 (MEtCO2) in the minute before the shock. Sensitivity, specificity, receiver operating characteristic (ROC) curves and area under the curve (AUC) were calculated, for each predictor individually and for the combination of MEtCO2 and VF-waveform predictors. Separate analyses were done for first shocks and all shocks. RESULTS MEtCO2 in first shocks was significantly higher for successful than for unsuccessful shocks (31mmHg/25mmHg, p<0.05), but differences were not significant for all shocks (32mmHg/29mmHg, p>0.05). MEtCO2 predicted shock success with an AUC of 0.66 for first shocks, but was not a predictor for all shocks (AUC 0.54). AMSA and FuzzyEn presented AUCs of 0.76 and 0.77 for first shocks, and 0.75 and 0.75 for all shocks. For first shocks, adding MEtCO2 improved the AUC of AMSA and FuzzyEn to 0.79 and 0.83, respectively. CONCLUSIONS MEtCO2 predicted defibrillation success only for first shocks. Adding MEtCO2 to VF-waveform analysis in first shocks improved prediction of shock success. VF-waveform features and MEtCO2 were automatically calculated from the device files, so these methods could be introduced in current defibrillators adding only new software.
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Affiliation(s)
- Beatriz Chicote
- Communications Engineering Department, University of the Basque Country UPV/EHU, Ingeniero Torres Quevedo Plaza, 1, 48013 Bilbao, Spain.
| | - Elisabete Aramendi
- Communications Engineering Department, University of the Basque Country UPV/EHU, Ingeniero Torres Quevedo Plaza, 1, 48013 Bilbao, Spain
| | - Unai Irusta
- Communications Engineering Department, University of the Basque Country UPV/EHU, Ingeniero Torres Quevedo Plaza, 1, 48013 Bilbao, Spain
| | - Pamela Owens
- Department of Emergency Medicine, University of Texas Southwesterm Medical Center (UTSW), 5323 Harry Hines Blvd, Dallas, TX, USA
| | - Mohamud Daya
- Department of Emergency Medicine, Oregon Health & Science University, 3181 SW Sam Jackson Park Rd, Portland, OR 97239-3098, USA
| | - Ahamed Idris
- Department of Emergency Medicine, University of Texas Southwesterm Medical Center (UTSW), 5323 Harry Hines Blvd, Dallas, TX, USA
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Coult J, Blackwood J, Sherman L, Rea TD, Kudenchuk PJ, Kwok H. Ventricular Fibrillation Waveform Analysis During Chest Compressions to Predict Survival From Cardiac Arrest. Circ Arrhythm Electrophysiol 2019; 12:e006924. [PMID: 30626208 PMCID: PMC6532650 DOI: 10.1161/circep.118.006924] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
BACKGROUND Quantitative measures of the ventricular fibrillation (VF) ECG waveform can assess myocardial physiology and predict cardiac arrest outcomes, making these measures a candidate to help guide resuscitation. Chest compressions are typically paused for waveform measure calculation because compressions cause ECG artifact. However, such pauses contradict resuscitation guideline recommendations to minimize cardiopulmonary resuscitation interruptions. We evaluated a comprehensive group of VF measures with and without ongoing compressions to determine their performance under both conditions for predicting functionally-intact survival, the study's primary outcome. METHODS Five-second VF ECG segments were collected with and without chest compressions before 2755 defibrillation shocks from 1151 out-of-hospital cardiac arrest patients. Twenty-four individual measures and 3 combination measures were implemented. Measures were optimized to predict functionally-intact survival (Cerebral Performance Category score ≤2) using 460 training cases, and their performance evaluated using 691 independent test cases. RESULTS Measures predicted functionally-intact survival on test data with an area under the receiver operating characteristic curve ranging from 0.56 to 0.75 (median, 0.73) without chest compressions and from 0.53 to 0.75 (median, 0.69) with compressions ( P<0.001 for difference). Of all measures evaluated, the support vector machine model ranked highest both without chest compressions (area under the receiver operating characteristic curve, 0.75; 95% CI, 0.73-0.78) and with compressions (area under the receiver operating characteristic curve, 0.75; 95% CI, 0.72-0.78; P=0.75 for difference). CONCLUSIONS VF waveform measures predict functionally-intact survival when calculated during chest compressions, but prognostic performance is generally reduced compared with compression-free analysis. However, support vector machine models exhibited similar performance with and without compressions while also achieving the highest area under the receiver operating characteristic curve. Such machine learning models may, therefore, offer means to guide resuscitation during uninterrupted cardiopulmonary resuscitation.
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Affiliation(s)
- Jason Coult
- Department of Bioengineering, University of Washington,
Seattle, WA
- Center for Progress in Resuscitation, University of
Washington, Seattle, WA
| | - Jennifer Blackwood
- Center for Progress in Resuscitation, University of
Washington, Seattle, WA
- King County Emergency Medical Services, Seattle King County
Department of Public Health, Seattle, WA
| | - Lawrence Sherman
- Department of Bioengineering, University of Washington,
Seattle, WA
- Center for Progress in Resuscitation, University of
Washington, Seattle, WA
- Department of Medicine, University of Washington School of
Medicine, Seattle, WA
| | - Thomas D. Rea
- Center for Progress in Resuscitation, University of
Washington, Seattle, WA
- King County Emergency Medical Services, Seattle King County
Department of Public Health, Seattle, WA
- Department of Medicine, University of Washington School of
Medicine, Seattle, WA
| | - Peter J. Kudenchuk
- Center for Progress in Resuscitation, University of
Washington, Seattle, WA
- King County Emergency Medical Services, Seattle King County
Department of Public Health, Seattle, WA
- Division of Cardiology, University of Washington School of
Medicine, Seattle, WA
| | - Heemun Kwok
- Center for Progress in Resuscitation, University of
Washington, Seattle, WA
- Department of Emergency Medicine, University of Washington
School of Medicine, Seattle, WA
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