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Pallares Di Nunzio M, Montani F. Spike Timing-Dependent Plasticity with Enhanced Long-Term Depression Leads to an Increase of Statistical Complexity. ENTROPY (BASEL, SWITZERLAND) 2022; 24:1384. [PMID: 37420407 DOI: 10.3390/e24101384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 09/21/2022] [Accepted: 09/22/2022] [Indexed: 07/09/2023]
Abstract
Synaptic plasticity is characterized by remodeling of existing synapses caused by strengthening and/or weakening of connections. This is represented by long-term potentiation (LTP) and long-term depression (LTD). The occurrence of a presynaptic spike (or action potential) followed by a temporally nearby postsynaptic spike induces LTP; conversely, if the postsynaptic spike precedes the presynaptic spike, it induces LTD. This form of synaptic plasticity induction depends on the order and timing of the pre- and postsynaptic action potential, and has been termed spike time-dependent plasticity (STDP). After an epileptic seizure, LTD plays an important role as a depressor of synapses, which may lead to their complete disappearance together with that of their neighboring connections until days after the event. Added to the fact that after an epileptic seizure the network seeks to regulate the excess activity through two key mechanisms: depressed connections and neuronal death (eliminating excitatory neurons from the network), LTD becomes of great interest in our study. To investigate this phenomenon, we develop a biologically plausible model that privileges LTD at the triplet level while maintaining the pairwise structure in the STPD and study how network dynamics are affected as neuronal damage increases. We find that the statistical complexity is significantly higher for the network where LTD presented both types of interactions. While in the case where the STPD is defined with purely pairwise interactions an increase is observed as damage becomes higher for both Shannon Entropy and Fisher information.
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Affiliation(s)
| | - Fernando Montani
- Instituto de Física de La Plata (IFLP), CONICET-UNLP, La Plata B1900, Buenos Aires, Argentina
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Fernandes LHS, Araujo FHA, Silva MAR, Acioli-Santos B. Predictability of COVID-19 worldwide lethality using permutation-information theory quantifiers. RESULTS IN PHYSICS 2021; 26:104306. [PMID: 34002129 PMCID: PMC8117539 DOI: 10.1016/j.rinp.2021.104306] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Revised: 04/14/2021] [Accepted: 05/06/2021] [Indexed: 05/26/2023]
Abstract
This paper examines the predictability of COVID-19 worldwide lethality considering 43 countries. Based on the values inherent to Permutation entropy ( H s ) and Fisher information measure ( F s ), we apply the Shannon-Fisher causality plane (SFCP), which allows us to quantify the disorder an evaluate randomness present in the time series of daily death cases related to COVID-19 in each country. We also use Hs and Fs to rank the COVID-19 lethality in these countries based on the complexity hierarchy. Our results suggest that the most proactive countries implemented measures such as facemasks, social distancing, quarantine, massive population testing, and hygienic (sanitary) orientations to limit the impacts of COVID-19, which implied lower entropy (higher predictability) to the COVID-19 lethality. In contrast, the most reactive countries implementing these measures depicted higher entropy (lower predictability) to the COVID-19 lethality. Given this, our findings shed light that these preventive measures are efficient to combat the COVID-19 lethality.
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Affiliation(s)
- Leonardo H S Fernandes
- Department of Economics and Informatics, Federal Rural University of Pernambuco, Serra Talhada, PE 56909-535, Brazil
| | - Fernando H A Araujo
- Department of Statistics and Informatics, Federal Rural University of Pernambuco, Recife, PE 52171-900, Brazil
| | - Maria A R Silva
- Department of Biology, Federal Institute of Education, Science and Technology of Paraíba, Campus Cabedelo, PB 58103-772, Brazil
| | - Bartolomeu Acioli-Santos
- Department of Virology, Aggeu Magalhães Institute (IAM), Oswaldo Cruz Foundation (FIOCRUZ), Recife, PE, Brazil
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Unveiling Informational Properties of the Chen-Ouillon-Sornette Seismo-Electrical Model. ENTROPY 2021; 23:e23030337. [PMID: 33809156 PMCID: PMC8002195 DOI: 10.3390/e23030337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Revised: 03/07/2021] [Accepted: 03/10/2021] [Indexed: 11/26/2022]
Abstract
The seismo-electrical coupling is critical to understand the mechanism of geoelectrical precursors to earthquakes. A novel seismo-electrical model, called Chen–Ouillon–Sornette (COS) model, has been developed by combining the Burridge–Knopoff spring-block system with the mechanisms of stress-activated charge carriers (i.e., electrons and holes) and pressure-stimulated currents. Such a model, thus, can simulate fracture-induced electrical signals at a laboratory scale or earthquake-related geoelectrical signals at a geological scale. In this study, by using information measures of time series analysis, we attempt to understand the influence of diverse electrical conditions on the characteristics of the simulated electrical signals with the COS model. We employ the Fisher–Shannon method to investigate the temporal dynamics of the COS model. The result showed that the electrical parameters of the COS model, particularly for the capacitance and inductance, affect the levels of the order/disorder in the electrical time series. Compared to the field observations, we infer that the underground electrical condition has become larger capacitance or smaller inductance in seismogenic processes. Accordingly, this study may provide a better understanding of the mechanical–electrical coupling of the earth’s crust.
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Iaconis FR, Jiménez Gandica AA, Del Punta JA, Delrieux CA, Gasaneo G. Information-theoretic characterization of eye-tracking signals with relation to cognitive tasks. CHAOS (WOODBURY, N.Y.) 2021; 31:033107. [PMID: 33810719 DOI: 10.1063/5.0042104] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2020] [Accepted: 02/17/2021] [Indexed: 06/12/2023]
Abstract
Eye tracking is being increasingly used as a more powerful diagnosis instrument when compared with traditional pen-and-paper tests in psychopedagogy and psychology. This technology may significantly improve neurocognitive assessments in gathering indirect latent information about the subjects' performance. However, the meaning and implications of these data are far from being fully understood. In this work, we present a comprehensive study of eye tracking time series in terms of statistical complexity measures. We registered the eye tracking movements of several subjects solving the two parts of the commonly applied Trail Making Test (TMT-A and TMT-B) and studied their Shannon entropy, disequilibrium, statistical complexity, and Fisher information with respect to three different probability distributions. The results show that these quantifiers reveal information about different features of the gaze depending on the distribution considered. As a meaningful result, we found that Fisher information in the position distribution reflects the difficulties encountered by the subject when solving the task. Such a characterization may be of interest to understand the underlying cognitive tasks performed by the subjects, and, additionally, it can serve as a source of valuable parameters to quantitatively assess how and why the subjects budget their attention, providing psychologists and psychopedagogues with more refined neuropsychological evaluation features and tools.
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Affiliation(s)
- F R Iaconis
- Departamento de Física, Universidad Nacional del Sur-CONICET, 8000 Bahía Blanca, Argentina
| | - A A Jiménez Gandica
- Departamento de Física, Universidad Nacional del Sur-CONICET, 8000 Bahía Blanca, Argentina
| | - J A Del Punta
- Departamento de Física, Universidad Nacional del Sur-CONICET, 8000 Bahía Blanca, Argentina
| | - C A Delrieux
- Departamento de Ingeniería Eléctrica y Computadoras, Universidad Nacional del Sur-CONICET, 8000 Bahía Blanca, Argentina
| | - G Gasaneo
- Departamento de Física, Universidad Nacional del Sur-CONICET, 8000 Bahía Blanca, Argentina
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Mendoza-Ruiz J, Alonso-Malaver CE, Valderrama M, Rosso OA, Martinez JH. Dynamics in cortical activity revealed by resting-state MEG rhythms. CHAOS (WOODBURY, N.Y.) 2020; 30:123138. [PMID: 33380010 DOI: 10.1063/5.0025189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2020] [Accepted: 11/30/2020] [Indexed: 06/12/2023]
Abstract
The brain is a biophysical system subject to information flows that may be thought of as a many-body architecture with a spatiotemporal dynamics described by its neuronal structures. The oscillatory nature of brain activity allows these structures (nodes) to be described as a set of coupled oscillators forming a network where the node dynamics and that of the network topology can be studied. Quantifying its dynamics at various scales is an issue that claims to be explored for several brain activities, e.g., activity at rest. The resting-state (RS) associates the underlying brain dynamics of healthy subjects that are not actively compromised with sensory or cognitive processes. Studying its dynamics is highly non-trivial but opens the door to understand the general principles of brain functioning, as well as to contrast a passive null condition vs the dynamics of pathologies or non-resting activities. Here, we hypothesize about how the spatiotemporal dynamics of cortical fluctuations could be for healthy subjects at RS. To do that, we retrieve the alphabet that reconstructs the dynamics (entropy-complexity) of magnetoencephalography (MEG) signals. We assemble the cortical connectivity to elicit the dynamics in the network topology. We depict an order relation between entropy and complexity for frequency bands that is ubiquitous for different temporal scales. We unveiled that the posterior cortex conglomerates nodes with both stronger dynamics and high clustering for α band. The existence of an order relation between dynamic properties suggests an emergent phenomenon characteristic of each band. Interestingly, we find the posterior cortex as a domain of dual character that plays a cardinal role in both the dynamics and structure regarding the activity at rest. To the best of our knowledge, this is the first study with MEG involving information theory and network science to better understand the dynamics and structure of brain activity at rest for different bands and scales.
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Affiliation(s)
- J Mendoza-Ruiz
- Department of Statistics, Universidad Nacional de Colombia, Cr 45 #26-85, Bogotá, Colombia
| | - C E Alonso-Malaver
- Department of Statistics, Universidad Nacional de Colombia, Cr 45 #26-85, Bogotá, Colombia
| | - M Valderrama
- Department of Biomedical Engineering, Universidad de los Andes, Cr 1 #18A-12, Bogotá, Colombia
| | - O A Rosso
- Instituto de Física, Universidade Federal de Alagoas (UFAL), BR 104 Norte km 97, 57072-970 Maceió, Alagoas, Brazil
| | - J H Martinez
- Department of Biomedical Engineering, Universidad de los Andes, Cr 1 #18A-12, Bogotá, Colombia
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Echegoyen I, López-Sanz D, Martínez JH, Maestú F, Buldú JM. Permutation Entropy and Statistical Complexity in Mild Cognitive Impairment and Alzheimer's Disease: An Analysis Based on Frequency Bands. ENTROPY 2020; 22:e22010116. [PMID: 33285891 PMCID: PMC7516422 DOI: 10.3390/e22010116] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/17/2019] [Revised: 01/15/2020] [Accepted: 01/16/2020] [Indexed: 12/14/2022]
Abstract
We present one of the first applications of Permutation Entropy (PE) and Statistical Complexity (SC) (measured as the product of PE and Jensen-Shanon Divergence) on Magnetoencephalography (MEG) recordings of 46 subjects suffering from Mild Cognitive Impairment (MCI), 17 individuals diagnosed with Alzheimer's Disease (AD) and 48 healthy controls. We studied the differences in PE and SC in broadband signals and their decomposition into frequency bands ( δ , θ , α and β ), considering two modalities: (i) raw time series obtained from the magnetometers and (ii) a reconstruction into cortical sources or regions of interest (ROIs). We conducted our analyses at three levels: (i) at the group level we compared SC in each frequency band and modality between groups; (ii) at the individual level we compared how the [PE, SC] plane differs in each modality; and (iii) at the local level we explored differences in scalp and cortical space. We recovered classical results that considered only broadband signals and found a nontrivial pattern of alterations in each frequency band, showing that SC does not necessarily decrease in AD or MCI.
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Affiliation(s)
- Ignacio Echegoyen
- Laboratory of Biological Networks, Centre for Biomedical Technology, Universidad Politécnica de Madrid (UPM), 28223 Madrid, Spain;
- Complex Systems Group, Rey Juan Carlos University, 28933 Madrid, Spain
- Grupo Interdisciplinar de Sistemas Complejos (GISC), 28911 Madrid, Spain;
- Correspondence:
| | - David López-Sanz
- Laboratory of Cognitive and Computational Neuroscience, Centre for Biomedical Technology, Universidad Politécnica de Madrid (UPM), 28223 Madrid, Spain; (D.L.-S.); (F.M.)
- Department of Experimental Psychology, Complutense University of Madrid, 28223 Madrid, Spain
| | - Johann H. Martínez
- Grupo Interdisciplinar de Sistemas Complejos (GISC), 28911 Madrid, Spain;
- Biomedical Engineering Department, Universidad de los Andes, Bogotá 111711, Colombia
| | - Fernando Maestú
- Laboratory of Cognitive and Computational Neuroscience, Centre for Biomedical Technology, Universidad Politécnica de Madrid (UPM), 28223 Madrid, Spain; (D.L.-S.); (F.M.)
- Department of Experimental Psychology, Complutense University of Madrid, 28223 Madrid, Spain
- Biomedical Research Networking Center in Bioengineering, Biomaterials and Nanomedicine, 28029 Zaragoza, Spain
| | - Javier M. Buldú
- Laboratory of Biological Networks, Centre for Biomedical Technology, Universidad Politécnica de Madrid (UPM), 28223 Madrid, Spain;
- Complex Systems Group, Rey Juan Carlos University, 28933 Madrid, Spain
- Grupo Interdisciplinar de Sistemas Complejos (GISC), 28911 Madrid, Spain;
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Evaluation of synchronization measures for capturing the lagged synchronization between EEG channels: A cognitive task recognition approach. Comput Biol Med 2019; 114:103441. [PMID: 31561099 DOI: 10.1016/j.compbiomed.2019.103441] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Revised: 08/25/2019] [Accepted: 09/07/2019] [Indexed: 11/22/2022]
Abstract
During cognitive, perceptual and sensory tasks, connectivity profile changes across different regions of the brain. Variations of such connectivity patterns between different cognitive tasks can be evaluated using pairwise synchronization measures applied to electrophysiological signals, such as electroencephalography (EEG). However, connectivity-based task recognition approaches achieving viable recognition performance have been lacking from the literature. By using several synchronization measures, we identify time lags between channel pairs during different cognitive tasks. We employed mutual information, cross correntropy, cross correlation, phase locking value, cosine similarity and nonlinear interdependence measures. In the training phase, for each type of cognitive task, we identify the time lags that maximize the average synchronization between channel pairs. These lags are used to calculate pairwise synchronization values with which we construct the train and test feature vectors for recognition of the cognitive task carried out using Fisher's linear discriminant (FLD) analysis. We tested our framework in a motor imagery activity recognition scenario on PhysioNet Motor Movement/Imagery and BCI Competition-III Ⅳa datasets. For PhysioNet dataset, average performance results ranging between % 51 and % 61 across 20 subjects. For BCI Competition-Ⅲ dataset, we achieve an average recognition performance of % 76 which is above the minimum reliable communication rate (% 70). We achieved an average accuracy over the minimum reliable communication rate on the BCI Competition-Ⅲ dataset. Performance levels were lower on the PhysioNet dataset. These results indicate that a viable task recognition system is achievable using pairwise synchronization measures evaluated at the proper task specific lags.
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