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Yang Y, Callaham MA, Wu X, Zhang Y, Wu D, Wang D. Gut microbial communities and their potential roles in cellulose digestion and thermal adaptation of earthworms. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 903:166666. [PMID: 37657540 DOI: 10.1016/j.scitotenv.2023.166666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Revised: 08/15/2023] [Accepted: 08/27/2023] [Indexed: 09/03/2023]
Abstract
Adaptations to temperature and food resources, which can be affected by gut microbiota, are two main adaptive strategies allowing soil fauna to survive in their habitats, especially for cold-blooded animals. Earthworms are often referred to as ecosystem engineers because they make up the biggest component of the animal biomass found in the soil. They are considered as an important indicator in the triangle of soil quality, health and functions. However, the roles of gut microbiota in the environmental adaptation of earthworms at a large scale remain obscure. We explored the gut bacterial communities and their functions in the environmental adaptation of two widespread earthworm species (Eisenia nordenskioldi Eisen and Drawida ghilarovi Gates) in Northeast China (1661 km). Based on our findings, the alpha diversity of gut bacterial communities decreased with the increase of latitude, and the gut bacterial community composition was shaped by both mean annual temperature (MAT) and cellulose. Actinobacteria, Proteobacteria, Firmicutes, and Planctomycetes, recognized as the predominant cellulose degraders, were keystone taxa driving gut bacterial interactions. Actinobacteria, Firmicutes, and Planctomycetes were influenced by MAT and cellulose, and had higher contributions to gut total cellulase activity. The optimal temperature for total cellulase in the gut of E. nordenskioldi (25-30 °C) was lower than that of D ghilarovi (40 °C). The gut microbiota-deleted earthworms had the lowest cellulose degradation rate (1.07 %). The cellulose was degraded faster by gut bacteria from the host they were derived, indicating the presence of home field advantage of cellulose decomposition. This study provides a foundation for understanding the biotic strategies adopted by earthworms when they enter a new habitat, with gut microbiota being central to food digestion and environmental adaptability.
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Affiliation(s)
- Yurong Yang
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, 130024, China
| | - Mac A Callaham
- USDA, Forest Service, Southern Research Station, Center for Forest Disturbance Science, Athens, GA 30602, USA
| | - Xuefeng Wu
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, 130024, China
| | - Yufeng Zhang
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, 130024, China; Hebei Key Laboratory of Animal Diversity, Langfang Normal University, Langfang, 065000, China
| | - Donghui Wu
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, 130024, China; Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, 130117, China; Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China; Jilin Songnen Grassland Ecosystem National Observation and Research Station, Changchun, 130024, China.
| | - Deli Wang
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, 130024, China; Jilin Songnen Grassland Ecosystem National Observation and Research Station, Changchun, 130024, China
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Duan B, Xiao R, Cai T, Man X, Ge Z, Gao M, Mencuccini M. Understory species composition mediates soil greenhouse gas fluxes by affecting bacterial community diversity in boreal forests. Front Microbiol 2023; 13:1090169. [PMID: 36741883 PMCID: PMC9894877 DOI: 10.3389/fmicb.2022.1090169] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2022] [Accepted: 12/05/2022] [Indexed: 01/22/2023] Open
Abstract
Introduction Plant species composition in forest ecosystems can alter soil greenhouse gas (GHG) budgets by affecting soil properties and microbial communities. However, little attention has been paid to the forest types characterized by understory vegetation, especially in boreal forests where understory species contribute significantly to carbon and nitrogen cycling. Method In the present study, soil GHG fluxes, soil properties and bacterial community, and soil environmental conditions were investigated among three types of larch forest [Rhododendron simsii-Larix gmelinii forest (RL), Ledum palustre-Larix gmelinii forest (LL), and Sphagnum-Bryum-Ledum palustre-Larix gmelinii forest (SLL)] in the typical boreal region of northeast China to explore whether the forest types characterized by different understory species can affect soil GHG fluxes. Results The results showed that differences in understory species significantly affected soil GHG fluxes, properties, and bacterial composition among types of larch forest. Soil CO2 and N2O fluxes were significantly higher in LL (347.12 mg m-2 h-1 and 20.71 μg m-2 h-1) and RL (335.54 mg m-2 h-1 and 20.73 μg m-2 h-1) than that in SLL (295.58 mg m-2 h-1 and 17.65 μg m-2 h-1), while lower soil CH4 uptake (-21.07 μg m-2 h-1) were found in SLL than in RL (-35.21 μg m-2 h-1) and LL (-35.85 μg m-2 h-1). No significant differences between LL and RL were found in soil CO2, CH4, and N2O fluxes. Soil bacterial composition was mainly dominated by Proteobacteria, Actinobacteria, Acidobacteria, and Chloroflexi among the three types of larch forest, while their abundances differed significantly. Soil environmental variables, soil properties, bacterial composition, and their interactions significantly affected the variations in GHG fluxes with understory species. Specifically, structural equation modeling suggested that soil bacterial composition and temperature had direct close links with variations in soil GHG fluxes among types of larch forest. Moreover, soil NO3 --N and NH4 + - N content also affected soil CO2, CH4, and N2O fluxes indirectly, via their effects on soil bacterial composition. Discussion Our study highlights the importance of understory species in regulating soil GHG fluxes in boreal forests, which furthers our understanding of the role of boreal forests in sustainable development and climate change mitigation.
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Affiliation(s)
- Beixing Duan
- School of Forestry, Northeast Forestry University, Harbin, China,Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin, China,CREAF, Barcelona, Spain
| | - Ruihan Xiao
- School of Forestry, Northeast Forestry University, Harbin, China,Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin, China
| | - Tijiu Cai
- School of Forestry, Northeast Forestry University, Harbin, China,Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin, China,*Correspondence: Tijiu Cai,
| | - Xiuling Man
- School of Forestry, Northeast Forestry University, Harbin, China,Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin, China
| | - Zhaoxin Ge
- School of Forestry, Northeast Forestry University, Harbin, China,Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin, China
| | - Minglei Gao
- School of Forestry, Northeast Forestry University, Harbin, China,Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin, China
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Duan B, Cai T, Man X, Xiao R, Gao M, Ge Z, Mencuccini M. Different variations in soil CO 2, CH 4, and N 2O fluxes and their responses to edaphic factors along a boreal secondary forest successional trajectory. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 838:155983. [PMID: 35588825 DOI: 10.1016/j.scitotenv.2022.155983] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2022] [Revised: 04/22/2022] [Accepted: 05/11/2022] [Indexed: 06/15/2023]
Abstract
Forest succession is an important process regulating the carbon and nitrogen budgets in forest ecosystems. However, little is known about how and extent by which vegetation succession predictably affects soil CO2, CH4, and N2O fluxes, especially in boreal forest. Here, a field study was conducted along a secondary forest succession trajectory from Betula platyphylla forest (early stage), then Betula platyphylla-Larix gmelinii forest (intermediate stage), to Larix gmelinii forest (late stage) to explore the effects of forest succession on soil greenhouse gas fluxes and related soil environmental factors in Northeast China. The results showed significant differences in soil greenhouse gas fluxes during the forest succession. During the study period, the average soil CO2 flux was greatest at mid-successional stage (444.72 mg m-2 h-1), followed by the late (341.81 mg m-2 h-1) and the early-successional (347.12 mg m-2 h-1) stages. The average soil CH4 flux increased significantly during succession, ranging from -0.062 to -0.036 mg m-2 h-1. The average soil N2O flux was measured as 17.95 μg m-2 h-1 at intermediate successional stage, significantly lower than that at late (20.71 μg m-2 h-1) and early-successional (20.85 μg m-2 h-1) stages. During forest succession, soil greenhouse gas fluxes showed significant correlations with soil and environmental factors at both seasonal and successional time scales. The seasonal variations of soil GHG fluxes were mainly influenced by soil temperature and water content. Meanwhile, soil MBN and soil NO3--N content were also important factors for soil N2O fluxes. Structural equation modelling showed that forest succession affected soil CO2 fluxes by changing soil temperature and microbial biomass carbon, affected soil CH4 fluxes mainly by changing soil water content and soil pH value, and affected soil N2O fluxes mainly by changing soil temperature, microbial biomass nitrogen, and soil NO3--N content. Our study suggests that forest succession mainly alters soil nutrient and soil environment/chemical properties affecting soil CO2 and N2O fluxes and soil CH4 fluxes, respectively, in the secondary forest succession process.
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Affiliation(s)
- Beixing Duan
- School of Forestry, Northeast Forestry University, Harbin 150040, China; Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin 150040, China; CREAF, Barcelona, Cerdanyola del Valles, Spain.
| | - Tijiu Cai
- School of Forestry, Northeast Forestry University, Harbin 150040, China; Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin 150040, China.
| | - Xiuling Man
- School of Forestry, Northeast Forestry University, Harbin 150040, China; Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin 150040, China.
| | - Ruihan Xiao
- School of Forestry, Northeast Forestry University, Harbin 150040, China; Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin 150040, China.
| | - Minglei Gao
- School of Forestry, Northeast Forestry University, Harbin 150040, China; Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin 150040, China.
| | - Zhaoxin Ge
- School of Forestry, Northeast Forestry University, Harbin 150040, China; Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin 150040, China.
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How Potential Evapotranspiration Regulates the Response of Canopy Transpiration to Soil Moisture and Leaf Area Index of the Boreal Larch Forest in China. FORESTS 2022. [DOI: 10.3390/f13040571] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Transpiration is a critical component of the hydrological cycle in the terrestrial forest ecosystem. However, how potential evapotranspiration regulates the response of canopy transpiration to soil moisture and leaf area index of the boreal larch forest in China has rarely been evaluated. The present study was conducted in the larch (Larix gmelinii (Rupr.) Rupr.) forest, which is a typical boreal forest in China. The canopy transpiration was measured using sap flow techniques from May to September in 2021 and simultaneously observing the meteorological variables, leaf area index (LAI) and soil moisture (SWC). The results showed that there were significant differences in canopy transpiration of Larix gmelinii among the months. The correlation and regression analysis indicated that canopy transpiration was mainly influenced by potential evapotranspiration (PET), while the effect of soil moisture on canopy transpiration was lowest compared with other environmental factors. Furthermore, our results revealed that the effect of PET on canopy transpiration was not regulated by soil moisture when soil moisture exceeded 0.2 cm3 cm−3. More importantly, under the condition of sufficient soil moisture, it was demonstrated that the response of canopy transpiration to leaf area index was limited when PET exceeded 9 mm/day. These results provide valuable implications for supporting forest management and water resource utilization in the boreal forest ecosystem under the context of global warming.
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Wang W, Sun J, Zhong Z, Xiao L, Wang Y, Wang H. Relating macrofungal diversity and forest characteristics in boreal forests in China: Conservation effects, inter-forest-type variations, and association decoupling. Ecol Evol 2021; 11:13268-13282. [PMID: 34646468 PMCID: PMC8495802 DOI: 10.1002/ece3.8049] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Revised: 08/04/2021] [Accepted: 08/09/2021] [Indexed: 11/11/2022] Open
Abstract
QUESTION How conservation and forest type affect macrofungal compositional diversity is not well understood. Even less is known about macrofungal associations with plants, soils, and geoclimatic conditions. LOCATION Southern edge of boreal forest distribution in China, named as Huzhong Nature Reserve. METHODS We surveyed a total of 72 plots for recording macrofungi, plants, and topography in 2015 and measured soil organic carbon, nitrogen, and bulk density. Effects of conservation and forest types on macrofungi and plants were compared, and their associations were decoupled by structural equation modeling (SEM) and redundancy ordination (RDA). RESULTS Conservation and forest type largely shaped macrofungal diversity. Most of the macrofungal traits declined with the conservation intensities or peaked at the middle conservation region. Similarly, 91% of macrofungal traits declined or peaked in the middle succession stage of birch-larch forests. Forest conservation resulted in the observation of sparse, larch-dominant, larger tree forests. Moreover, the soil outside the Reserve had more water, higher fertility, and lower bulk density, showing miscellaneous wood forest preference. There is a complex association between conservation site characteristics, soils, plants, and macrofungi. Variation partitioning showed that soil N was the top-one factor explaining the macrofungal variations (10%). As shown in SEM coefficients, conservation effect to macrofungi (1.1-1.2, p < .05) was like those from soils (1.2-1.6, p < .05), but much larger than the effect from plants (0.01-0.14, p > .10). For all tested macrofungal traits, 89%-97% of their variations were from soils, and 5%-21% were from conservation measures, while plants compensated 1%-10% of these effects. Our survey found a total of 207 macrofungal species, and 65 of them are new updates in this Reserve, indicating data shortage for the macrofungi list here. CONCLUSION Our findings provide new data for the joint conservation of macrofungi and plant communities, highlighting the crucial importance of soil matrix for macrofungal conservation in boreal forests.
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Affiliation(s)
- Wenjie Wang
- Urban Forests and Wetlands groupNortheast Institute of Geography and AgroecologyChinese Academy of ScienceChangchunChina
- Key Laboratory of Forest Plant EcologyMinistry of EducationNortheast Forestry UniversityHarbinChina
| | - Jingxue Sun
- Key Laboratory of Forest Plant EcologyMinistry of EducationNortheast Forestry UniversityHarbinChina
| | - Zhaoliang Zhong
- Key Laboratory of Forest Plant EcologyMinistry of EducationNortheast Forestry UniversityHarbinChina
| | - Lu Xiao
- Urban Forests and Wetlands groupNortheast Institute of Geography and AgroecologyChinese Academy of ScienceChangchunChina
| | - Yuanyuan Wang
- Urban Forests and Wetlands groupNortheast Institute of Geography and AgroecologyChinese Academy of ScienceChangchunChina
| | - Huimei Wang
- Key Laboratory of Forest Plant EcologyMinistry of EducationNortheast Forestry UniversityHarbinChina
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Bhattacharyya R, Rabbi SMF, Zhang Y, Young IM, Jones AR, Dennis PG, Menzies NW, Kopittke PM, Dalal RC. Soil organic carbon is significantly associated with the pore geometry, microbial diversity and enzyme activity of the macro-aggregates under different land uses. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 778:146286. [PMID: 33725601 DOI: 10.1016/j.scitotenv.2021.146286] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2020] [Revised: 02/22/2021] [Accepted: 02/28/2021] [Indexed: 06/12/2023]
Abstract
Microbial activity strongly influences the stabilization of soil organic matter (SOM), and is affected by the abiotic properties within soil aggregates, which tend to differ between land uses. Here, we assessed the effects of SOM and pore geometry on the diversity and activity of microbial communities within aggregates formed under different land uses (undisturbed, plantation, pasture, and cropping). X-ray micro-computed tomography (μCT) revealed that macro-aggregates (2-8 mm) of undisturbed soils were porous, highly-connected, and had 200% more macro-pores compared with those from pasture and cropping soils. While the macro-aggregates of undisturbed soils had greater soil organic carbon (SOC) contents and N-acetyl β-glucosaminidase, β-glucosidase, and phosphatase activities, those of cropped soils harboured more diverse bacterial communities. Organic carbon was positively associated with the porosity of the macro-aggregates, which was negatively associated with microbial diversity and positively associated with enzyme activity. Thus, the biophysical processes in macro-aggregates may be important for SOC stabilization within the macro-aggregates.
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Affiliation(s)
- Ranjan Bhattacharyya
- School of Agriculture and Food Sciences, The University of Queensland, St Lucia, Queensland 4072, Australia; CESCRA, ICAR-Indian Agricultural Research Institute, New Delhi, India.
| | - Sheikh M F Rabbi
- School of Life and Environmental Sciences, Faculty of Science, The University of Sydney, Camperdown, NSW 2006, Australia
| | - Yaqi Zhang
- School of Agriculture and Food Sciences, The University of Queensland, St Lucia, Queensland 4072, Australia
| | - Iain M Young
- School of Life and Environmental Sciences, Faculty of Science, The University of Sydney, Camperdown, NSW 2006, Australia
| | - Andrew R Jones
- School of Agriculture and Food Sciences, The University of Queensland, St Lucia, Queensland 4072, Australia; Department of Environmental Science, Policy, and Management, University of California, Berkeley, CA 94707, USA
| | - Paul G Dennis
- School of Earth and Environmental Sciences, The University of Queensland, St Lucia, Queensland 4072, Australia
| | - Neal W Menzies
- School of Agriculture and Food Sciences, The University of Queensland, St Lucia, Queensland 4072, Australia
| | - Peter M Kopittke
- School of Agriculture and Food Sciences, The University of Queensland, St Lucia, Queensland 4072, Australia
| | - Ram C Dalal
- School of Agriculture and Food Sciences, The University of Queensland, St Lucia, Queensland 4072, Australia
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Increased Litter Greatly Enhancing Soil Respiration in Betula platyphylla Forests of Permafrost Region, Northeast China. FORESTS 2021. [DOI: 10.3390/f12010089] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The change of litter input can affect soil respiration (Rs) by influencing the availability of soil organic carbon and nutrients, regulating soil microenvironments, thus resulting in a profound influence on soil carbon cycle of the forest ecosystem. We conducted an aboveground litterfall manipulation experiment in different-aged Betula platyphylla forests (25-, 40- and 61-year-old) of the permafrost region, located in the northeast of China, during May to October in 2018, with each stand treated with doubling litter (litter addition, DL), litter exclusion (no-litter, NL) and control litter (CK). Our results indicated that Rs decreased under NL treatment compared with CK treatment. The effect size lessened with the increase in the stand age; the greatest reduction was found for young Betula platyphylla forest (24.46% for 25-year-old stand) and tended to stabilize with the growth of forest with the reduction of 15.65% and 15.23% for 40-and 61- year-old stands, respectively. Meanwhile, under DL treatment, Rs increased by 27.38%, 23.83% and 23.58% on 25-, 40- and 61-year-old stands, respectively. Our results also showed that the increase caused by DL treatment was larger than the reduction caused by NL treatment, leading to a priming effect, especially on 40- and 61-year-old stands. The change in litter input was the principal factor affecting the change of Rs under litter manipulation. The soil temperature was also a main factor affecting the contribution rate of litter to Rs of different-aged stands, which had a significant positive exponential correlation with Rs. This suggests that there is a significant relationship between litter and Rs, which consequently influences the soil carbon cycle in Betula platyphylla forests of the permafrost region, Northeast China. Our finding indicated the increased litter enhanced the Rs in Betula platyphylla forest, which may consequently increase the carbon emission in a warming climate in the future. It is of great importance for future forest management in the permafrost region, Northeast China.
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Duan B, Man X, Cai T, Xiao R, Ge Z. Increasing soil organic carbon and nitrogen stocks along with secondary forest succession in permafrost region of the Daxing’an mountains, northeast China. Glob Ecol Conserv 2020. [DOI: 10.1016/j.gecco.2020.e01258] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
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Short-Term Litter Manipulations have Strong Impact on Soil Nitrogen Dynamics in Larix gmelinii Forest of Northeast China. FORESTS 2020. [DOI: 10.3390/f11111205] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Changes in above-ground litterfall can influence below-ground biogeochemical processes in forests, which substantially impacts soil nitrogen (N) and nutrient cycling. However, how these soil processes respond to the litter manipulation is complex and poorly understood, especially in the N-limiting boreal forest. We aimed to examine how soil N dynamics respond to litter manipulations in a boreal larch forest. A litter manipulation experiment including control, litter exclusion, and litter addition was performed in the Larix gmelinii forest on the north of the Daxing’an Mountains in China. Monthly soil inorganic N, microbial biomass and the rate of net N mineralization in both 0–10 cm and 10–20 cm layers, and N2O flux were analyzed from May 2018 to October 2018. In 0–20 cm soil layer the average soil inorganic N contents, microbial biomass N (MBN) contents, the rate of net N mineralization (Rmin), and the soil N2O emission in the litter addition plot were approximately 40.58%, 54.16%, 128.57%, and 38.52% greater, respectively than those in the control. While litter exclusion reduced those indexes about 29.04%, 19.84%, 80.98%, and 31.45%, respectively. Compared with the dynamics of the 10–20 cm soil layer, the N dynamics in 0–10 cm soil were more sensitive to litter manipulation. Rmin and N2O emissions were significantly correlated with MBN in most cases. Our results highlight the short-term effects of litter manipulations on soil N dynamics, which suggests that the influence of litter on soil N process should be considered in the future defoliation management of the boreal larch forest.
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