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Rangel LI, Leveau JHJ. Applied microbiology of the phyllosphere. Appl Microbiol Biotechnol 2024; 108:211. [PMID: 38358509 PMCID: PMC10869387 DOI: 10.1007/s00253-024-13042-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Revised: 01/24/2024] [Accepted: 01/29/2024] [Indexed: 02/16/2024]
Abstract
The phyllosphere, or plant leaf surface, represents a microbial ecosystem of considerable size, holding extraordinary biodiversity and enormous potential for the discovery of new products, tools, and applications in biotechnology, agriculture, medicine, and elsewhere. This mini-review highlights the applied microbiology of the phyllosphere as an original field of study concerning itself with the genes, gene products, natural compounds, and traits that underlie phyllosphere-specific adaptations and services that have commercial and economic value for current or future innovation. Examples include plant-growth-promoting and disease-suppressive phyllobacteria, probiotics and fermented foods that support human health, as well as microbials that remedy foliar contamination with airborne pollutants, residual pesticides, or plastics. Phyllosphere microbes promote plant biomass conversion into compost, renewable energy, animal feed, or fiber. They produce foodstuffs such as thickening agents and sugar substitutes, industrial-grade biosurfactants, novel antibiotics and cancer drugs, as well as enzymes used as food additives or freezing agents. Furthermore, new developments in DNA sequence-based profiling of leaf-associated microbial communities allow for surveillance approaches in the context of food safety and security, for example, to detect enteric human pathogens on leafy greens, predict plant disease outbreaks, and intercept plant pathogens and pests on internationally traded goods. KEY POINTS: • Applied phyllosphere microbiology concerns leaf-specific adaptations for economic value • Phyllobioprospecting searches the phyllosphere microbiome for product development • Phyllobiomonitoring tracks phyllosphere microbial profiles for early risk detection.
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Affiliation(s)
- Lorena I Rangel
- Cell & Molecular Sciences, The James Hutton Institute, Dundee, Scotland, UK.
- Department of Plant Pathology, University of California, Davis, CA, USA.
| | - Johan H J Leveau
- Department of Plant Pathology, University of California, Davis, CA, USA.
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2
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Sitthikitpanya N, Ponuansri C, Jomnonkhaow U, Wongfaed N, Reungsang A. Unlocking the potential of sugarcane leaf waste for sustainable methane production: Insights from microbial pre-hydrolysis and reactor optimization. Heliyon 2024; 10:e25787. [PMID: 38356542 PMCID: PMC10865077 DOI: 10.1016/j.heliyon.2024.e25787] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Revised: 01/05/2024] [Accepted: 02/02/2024] [Indexed: 02/16/2024] Open
Abstract
Sugarcane leaf waste, a byproduct of the growing global sugar industry, challenges agricultural waste management. This study explores its potential for methane production via anaerobic digestion. A microbial pre-hydrolysis, using lignocellulose-degrading bacteria, enhanced soluble chemical oxygen demand at an optimal initial substrate concentration of 40 g-volatile solid/L. Comparative analysis with untreated and bioaugmented leaves revealed the pre-hydrolyzed leaves achieved the highest methane production rate (MPR) at 14.0 ± 0.5 mL-CH4/L·d, surpassing others by 1.47 and 1.67 times. Two continuous stirred tank reactors were employed to assess the optimal hydraulic retention time (HRT). Results showed a stable methane production with an HRT of 25 days, yielding high MPRs: 88.70 ± 0.63 mL-CH4/L·d from pre-hydrolyzed sugarcane leaves and 82.57 ± 1.22 mL-CH4/L·d from microbial consortium-augmented leaves. A 25-day HRT fosters high microbial diversity with Bacteroidota, Firmicutes, Chloroflexi, and Verrucomicrobiota dominance, indicating favorable conditions. Conversely, a 20-day HRT results in lower diversity due to unfavorable factors like low pH during organic overloading, leading to increased concentrations of volatile fatty acids and lactic acid, with Firmicutes as the predominant phylum. This study highlights sugarcane leaf waste's potential as a valuable resource for sustainable methane production.
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Affiliation(s)
- Napapat Sitthikitpanya
- Department of Biotechnology, Faculty of Technology, Khon Kaen University, Khon Kaen, 40002, Thailand
| | - Chaweewan Ponuansri
- Research Group for Development of Microbial Hydrogen Production Process from Biomass, Khon Kaen University, Khon Kaen, 40002, Thailand
| | - Umarin Jomnonkhaow
- Research Group for Development of Microbial Hydrogen Production Process from Biomass, Khon Kaen University, Khon Kaen, 40002, Thailand
| | - Nantharat Wongfaed
- Research Group for Development of Microbial Hydrogen Production Process from Biomass, Khon Kaen University, Khon Kaen, 40002, Thailand
| | - Alissara Reungsang
- Department of Biotechnology, Faculty of Technology, Khon Kaen University, Khon Kaen, 40002, Thailand
- Research Group for Development of Microbial Hydrogen Production Process from Biomass, Khon Kaen University, Khon Kaen, 40002, Thailand
- Academy of Science, Royal Society of Thailand, Bangkok, 10300, Thailand
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Nongkhai SN, Piemthongkham P, Bankeeree W, Punnapayak H, Lotrakul P, Prasongsuk S. Xylooligosaccharides produced from sugarcane leaf arabinoxylan using xylanase from Aureobasidium pullulans NRRL 58523 and its prebiotic activity toward Lactobacillus spp. Heliyon 2023; 9:e22107. [PMID: 38034795 PMCID: PMC10682688 DOI: 10.1016/j.heliyon.2023.e22107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Revised: 09/07/2023] [Accepted: 11/04/2023] [Indexed: 12/02/2023] Open
Abstract
In an attempt to enhance the value of sugarcane leaf, xylan was extracted and used for xylooligosaccharide (XO) production via enzymatic hydrolysis using xylanase from the black yeast Aureobasidium pullulans. The xylan was extracted from sugarcane leaf using alkali extraction according to the response surface methodology. The highest xylan yield (99.42 ± 4.05 % recovery) was obtained using 14.32 % (w/v) NaOH, 13.25:1 liquid: solid ratio, at 121 °C and 15 lb.in2 for 32 min. Sugar composition and FTIR spectrum analyses confirmed its structure as arabinoxylan. The extracted arabinoxylan had a relatively high molecular weight compared to previous studies. Crude endoxylanase from A. pullulans NRRL 58523 was selected for enzymatic hydrolysis of the xylan. The enzyme hydrolyzed well at 50 °C, pH 4.0 and was relatively stable under this condition (87.38 ± 1.26 % of the activity remained after 60 h). XOs, especially xylobiose and xylotriose, were obtained at the maximum yield of 237.51 ± 17.69 mg/g xylan via endoxylanase hydrolysis under the optimum conditions (50 °C, pH 4.0, 65.31 U/g xylan, 53 h). XOs exhibited species-specific prebiotic activity toward three strains of Lactobacillus spp. but not toward Bifidobacterium spp.
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Affiliation(s)
- Sorawit Na Nongkhai
- Program in Biotechnology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
- Plant Biomass Utilization Research Unit, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Phitchayakon Piemthongkham
- Program in Biotechnology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
- Plant Biomass Utilization Research Unit, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Wichanee Bankeeree
- Plant Biomass Utilization Research Unit, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Hunsa Punnapayak
- Plant Biomass Utilization Research Unit, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
- Department of Biology, Faculty Science and Technology, Airlangga University, Surabaya 60115, Indonesia
| | - Pongtharin Lotrakul
- Plant Biomass Utilization Research Unit, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Sehanat Prasongsuk
- Plant Biomass Utilization Research Unit, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
- Department of Biology, Faculty Science and Technology, Airlangga University, Surabaya 60115, Indonesia
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Sukphun P, Wongarmat W, Imai T, Sittijunda S, Chaiprapat S, Reungsang A. Two-stage biohydrogen and methane production from sugarcane-based sugar and ethanol industrial wastes: A comprehensive review. BIORESOURCE TECHNOLOGY 2023; 386:129519. [PMID: 37468010 DOI: 10.1016/j.biortech.2023.129519] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Revised: 07/14/2023] [Accepted: 07/16/2023] [Indexed: 07/21/2023]
Abstract
The transition to renewable energy sources is crucial to ensure a sustainable future. Although the sugar and ethanol industries benefit from this transition, there are untapped opportunities to utilize the waste generated from the sugar and ethanol process chains through two-stage anaerobic digestion (TSAD). This review comprehensively discusses the utilization of various sugarcane-based industrial wastes by TSAD for sequential biohydrogen and methane production. Factors influencing TSAD process performance, including pH, temperature, hydraulic retention time, volatile fatty acids and alkalinity, nutrient imbalance, microbial population, and inhibitors, were discussed in detail. The potential of TSAD to reduce emissions of greenhouse gases is demonstrated. Recent findings, implications, and promising future research related to TSAD, including the integration of meta-omics approaches, gene manipulation and bioaugmentation, and application of artificial intelligence, are highlighted. The review can serve as important literature for the implementation, improvement, and advancements in TSAD research.
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Affiliation(s)
- Prawat Sukphun
- Department of Biotechnology, Faculty of Technology, Khon Kaen University, Khon Kaen 40002, Thailand
| | - Worapong Wongarmat
- Department of Biotechnology, Faculty of Technology, Khon Kaen University, Khon Kaen 40002, Thailand
| | - Tsuyoshi Imai
- Graduate School of Sciences and Technology for Innovation, Yamaguchi University, Yamaguchi 755-8611, Japan
| | - Sureewan Sittijunda
- Faculty of Environment and Resource Studies, Mahidol University, Nakhon Pathom 73170, Thailand
| | - Sumate Chaiprapat
- Department of Civil and Environment Engineering, PSU Energy Systems Research Institute (PERIN), Faculty of Engineering, Prince of Songkla University, Songkla 90002, Thailand
| | - Alissara Reungsang
- Department of Biotechnology, Faculty of Technology, Khon Kaen University, Khon Kaen 40002, Thailand; Research Group for Development of Microbial Hydrogen Production Process from Biomass, Khon Kaen University, Khon Kaen 40002, Thailand; Academy of Science, Royal Society of Thailand, Bangkok 10400, Thailand.
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Jayakumar M, Gindaba GT, Gebeyehu KB, Periyasamy S, Jabesa A, Baskar G, John BI, Pugazhendhi A. Bioethanol production from agricultural residues as lignocellulosic biomass feedstock's waste valorization approach: A comprehensive review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 879:163158. [PMID: 37001650 DOI: 10.1016/j.scitotenv.2023.163158] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2022] [Revised: 03/13/2023] [Accepted: 03/26/2023] [Indexed: 05/17/2023]
Abstract
Bioenergy is becoming very popular, drawing attention as a renewable energy source that may assist in managing growing energy costs, besides possibly affording revenue to underprivileged farmers and rural populations worldwide. Bioethanol made from agricultural residual-biomass provides irreplaceable environmental, socioeconomic, and strategic benefits and can be considered as a safe and cleaner liquid fuel alternative to traditional fossil fuels. There is a significant advancement made at the bench scale towards fuel ethanol production from agricultural lignocellulosic materials (ALCM). These process technologies include pretreatment of ALCM biomass employment of cellulolytic enzymes for depolymerizing carbohydrate polymers into fermentable sugars to effectively achieve it by applying healthy fermentative microbes for bioethanol generation. Amongst all the available process methods, weak acid hydrolysis followed by enzymatic hydrolysis process technique. Recovering higher proficient celluloses is more attractive in terms of economic benefits and long-term environmental effects. Besides, the state of ALCM biomass based bioethanol production methods is discussed in detail, which could make it easier for the scientific and industrial communities to utilize agricultural leftovers properly.
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Affiliation(s)
- Mani Jayakumar
- Department of Chemical Engineering, Haramaya Institute of Technology, Haramaya University, Haramaya, Dire Dawa, Ethiopia.
| | - Gadissa Tokuma Gindaba
- Department of Chemical Engineering, Haramaya Institute of Technology, Haramaya University, Haramaya, Dire Dawa, Ethiopia
| | | | - Selvakumar Periyasamy
- Department of Chemical Engineering, School of Mechanical, Chemical and Materials Engineering, Adama Science and Technology University, Adama 1888, Ethiopia
| | - Abdisa Jabesa
- Department of Chemical Engineering, Haramaya Institute of Technology, Haramaya University, Haramaya, Dire Dawa, Ethiopia
| | - Gurunathan Baskar
- Department of Biotechnology, St. Joseph's College of Engineering, Chennai 600119, India
| | - Beula Isabel John
- Department of Energy and Environment, National Institute of Technology, Tiruchirappalli 620015, Tamil Nadu, India
| | - Arivalagan Pugazhendhi
- University Centre for Research & Development, Department of Civil Engineering, Chandigarh University, Mohali-140103, India; School of Engineering, Lebanese American University, Byblos, Lebanon.
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Tasnim Sahrin N, Shiong Khoo K, Wei Lim J, Shamsuddin R, Musa Ardo F, Rawindran H, Hassan M, Kiatkittipong W, Alaaeldin Abdelfattah E, Da Oh W, Kui Cheng C. Current perspectives, future challenges and key technologies of biohydrogen production for building a carbon-neutral future: A review. BIORESOURCE TECHNOLOGY 2022; 364:128088. [PMID: 36216282 DOI: 10.1016/j.biortech.2022.128088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Revised: 10/01/2022] [Accepted: 10/04/2022] [Indexed: 06/16/2023]
Abstract
The ever-increasing quantity of greenhouse gases in the atmosphere can be attributed to the rapid increase in the world population as well as the expansion of globalization. Hence, achieving carbon neutrality by 2050 stands as a challenging task to accomplish. Global industrialization had necessitated the need to enhance the current production systems to reduce greenhouse gases emission, whilst promoting the capture of carbon dioxide from atmosphere. Hydrogen is often touted as the fuel of future via substituting fossil-based fuels. In this regard, renewable hydrogen happens to be a niche sector of novel technologies in achieving carbon neutrality. Microalgae-based biohydrogen technologies could be a sustainable and economical approach to produce hydrogen from a renewable source, while simultaneously promoting the absorption of carbon dioxide. This review highlights the current perspectives of biohydrogen production as an alternate source of energy. In addition, future challenges associated with biohydrogen production at large-scale application, storage and transportation are included. Key technologies in producing biohydrogen are finally described in building a carbon-neutral future.
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Affiliation(s)
- Nurul Tasnim Sahrin
- HICoE-Centre for Biofuel and Biochemical Research, Institute of Self-Sustainable Building, Department of Fundamental and Applied Sciences, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia
| | - Kuan Shiong Khoo
- Department of Chemical Engineering and Materials Science, Yuan Ze University, Taoyuan, Taiwan
| | - Jun Wei Lim
- HICoE-Centre for Biofuel and Biochemical Research, Institute of Self-Sustainable Building, Department of Fundamental and Applied Sciences, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia; Department of Biotechnology, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Chennai, India.
| | - Rashid Shamsuddin
- HICoE-Centre for Biofuel and Biochemical Research, Institute of Self-Sustainable Building, Department of Chemical Engineering, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia
| | - Fatima Musa Ardo
- HICoE-Centre for Biofuel and Biochemical Research, Institute of Self-Sustainable Building, Department of Fundamental and Applied Sciences, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia
| | - Hemamalini Rawindran
- HICoE-Centre for Biofuel and Biochemical Research, Institute of Self-Sustainable Building, Department of Fundamental and Applied Sciences, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia
| | - Muzamil Hassan
- HICoE-Centre for Biofuel and Biochemical Research, Institute of Self-Sustainable Building, Universiti Teknologi PETRONAS, 32610 Seri Iskandar, Perak Darul Ridzuan, Malaysia
| | - Worapon Kiatkittipong
- Department of Chemical Engineering, Faculty of Engineering and Industrial Technology, Silpakorn University, Nakhon Pathom 73000, Thailand
| | - Eman Alaaeldin Abdelfattah
- Lecturer of Biochemistry and Molecular Science, Entomology Department, Faculty of Science, Cairo University, Egypt
| | - Wen Da Oh
- School of Chemical Sciences, Universiti Sains Malaysia, Gelugor 11800, Penang, Malaysia
| | - Chin Kui Cheng
- Center for Catalysis and Separation (CeCaS), Department of Chemical Engineering, College of Engineering, Khalifa University of Science and Technology, Abu Dhabi P.O. Box 127788, United Arab Emirates
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Adaptive Network Fuzzy Inference System and Particle Swarm Optimization of Biohydrogen Production Process. FERMENTATION 2022. [DOI: 10.3390/fermentation8100483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Green hydrogen is considered to be one of the best candidates for fossil fuels in the near future. Bio-hydrogen production from the dark fermentation of organic materials, including organic wastes, is one of the most cost-effective and promising methods for hydrogen production. One of the main challenges posed by this method is the low production rate. Therefore, optimizing the operating parameters, such as the initial pH value, operating temperature, N/C ratio, and organic concentration (xylose), plays a significant role in determining the hydrogen production rate. The experimental optimization of such parameters is complex, expensive, and lengthy. The present research used an experimental data asset, adaptive network fuzzy inference system (ANFIS) modeling, and particle swarm optimization to model and optimize hydrogen production. The coupling between ANFIS and PSO demonstrated a robust effect, which was evident through the improvement in the hydrogen production based on the four input parameters. The results were compared with the experimental and RSM optimization models. The proposed method demonstrated an increase in the biohydrogen production of 100 mL/L compared to the experimental results and a 200 mL/L increase compared to the results obtained using ANOVA.
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