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Liu W, Liu J, Zhang M, Zhang J, Sun B, He C, He P, Zhang W. 1+1<2: Combined effect of low temperature stress and salt stress on Sesuvium portulacastrum L. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2025; 219:109404. [PMID: 39675257 DOI: 10.1016/j.plaphy.2024.109404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2024] [Revised: 11/27/2024] [Accepted: 12/11/2024] [Indexed: 12/17/2024]
Abstract
To expedite the deployment of Sesuvium portulacastrum floating bed technology in Hangzhou Bay and the Yangtze River Estuary, and to overcome the cryogenic constraint, our study concentrated on investigating the impacts of both individual and combined stress factors, particularly low temperature and salinity, on its application. We detected the S. portulacastrum related enzyme activity and other biological macromolecules under low temperature stress, salt stress and combined stress. And we also analyzed the stress resistance mechanism under different stress conditions by transcriptomic technology. It was discovered that moderate salt stress could enhance plant tolerance to low temperature, indicating the presence of an antagonistic relationship between salinity and low temperature. The biological mechanism underlying this phenomenon lies in the fact that combined stresses induce the up-regulation of various genes and activate more pathways compared to single stress. Among these pathways, the linoleic acid metabolic pathway stands out as unique to combined stress conditions. This research represents the inaugural endeavor to investigate the impact of low temperature stress and combined stress on S.portulacastrum, offering a pivotal reference for the utilization of this plant in ecological restoration and management within the East China Sea. More valuable is that such conclusions may be extended to the coastal ecological governance of many high latitude countries, which is of great significance for global ecological environment improvement.
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Affiliation(s)
- Wei Liu
- School of Environmental and Chemical Engineering, Shanghai University, Shanghai, 200444, China; College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China
| | - Jinlin Liu
- College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China
| | - Meijing Zhang
- College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China
| | - Jianlin Zhang
- College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China
| | - Bin Sun
- College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China
| | - Chiquan He
- School of Environmental and Chemical Engineering, Shanghai University, Shanghai, 200444, China.
| | - Peimin He
- College of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, 201306, China.
| | - Wentao Zhang
- School of Materials Science and Engineering, Tsinghua University, Beijing, 100084, China; Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, 518055, China.
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Chanthini KMP, Pavithra GS, Murugan P, Malarvizhi P, Deva-Andrews A, Ramasubramanian R, Thulasi-Raman N, Malafaia G, Senthil-Nathan S, Prockow J. Management of excessive soil H+ ion induced toxicities by application of organic seaweed amendment enhances photosynthesis and resource use efficiencies in rice (Oryza sativa). ENVIRONMENTAL RESEARCH 2024; 247:118179. [PMID: 38218516 DOI: 10.1016/j.envres.2024.118179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Revised: 12/26/2023] [Accepted: 01/10/2024] [Indexed: 01/15/2024]
Abstract
Globally, soil acidification is a serious environmental issue that reduces commercial agricultural production. Rice is subjected to nutritional stress due to acidic soil, which is a major impediment to rice production. Since acid soil threatens rice plants with soil compaction, nutrient loss, and plant stress-induced oxidative cell damage that results in affecting the photosynthetic system, restricting the availability of water, and reducing overall plant growth and productivity. Since contemporary soil acidification management strategies provide mediocre results, the use of Sargassum wightii seaweed-based biostimulants (BS) and soil amendments is sought as an environmentally friendly alternative strategy, and therefore its potential isevaluated in this study. BS was able to mediate soil quality by improving soil pH and structure along with facilitating nitrogen phytoavailability. BS also increased the activity of the antioxidant enzyme system, superoxide dismutase ((48%), peroxidase (76.6%), and ascorbate peroxidase (63.5%), aggregating the monaldehyde-mediating accumulation of osmoprotective proline in roots, that was evident from rapid initiation of root hair growth in treated seedlings. BS was also able to physiologically modulate photosynthetic activities and chlorophyll production (24.31%) in leaves, maintaining the efficiency of plant water use by regulating the stomatal conductance (0.91 mol/m/s) and the transpiration rate (13.2 mM/m/s). The BS compounds were also successful in facilitating nitrogen uptake resulting in improved plant growth (59%), tiller-panicle number, and yield (52.57%), demonstrating a resourceful nitrogen use efficiency (71.96%) previously affected by stress induced by acid soil. Therefore, the study affirms the competent potential of S. wightii-based soil amendment to be applied not only to improve soil quality, but also to increase plant production and yield.
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Affiliation(s)
- Kanagaraj Muthu-Pandian Chanthini
- Sri Paramakalyani Centre for Excellence in Environmental Sciences, Manonmaniam Sundaranar University, Alwarkurichi, Tirunelveli, 627 412, Tamil-Nadu, India
| | - Ganesh-Subbaraja Pavithra
- Sri Paramakalyani Centre for Excellence in Environmental Sciences, Manonmaniam Sundaranar University, Alwarkurichi, Tirunelveli, 627 412, Tamil-Nadu, India
| | - Ponnusamy Murugan
- Sri Paramakalyani Centre for Excellence in Environmental Sciences, Manonmaniam Sundaranar University, Alwarkurichi, Tirunelveli, 627 412, Tamil-Nadu, India
| | - Pauldurai Malarvizhi
- Sri Paramakalyani Centre for Excellence in Environmental Sciences, Manonmaniam Sundaranar University, Alwarkurichi, Tirunelveli, 627 412, Tamil-Nadu, India
| | - Arulsoosairaj Deva-Andrews
- Sri Paramakalyani Centre for Excellence in Environmental Sciences, Manonmaniam Sundaranar University, Alwarkurichi, Tirunelveli, 627 412, Tamil-Nadu, India
| | - Ramakrishnan Ramasubramanian
- Sri Paramakalyani Centre for Excellence in Environmental Sciences, Manonmaniam Sundaranar University, Alwarkurichi, Tirunelveli, 627 412, Tamil-Nadu, India
| | - Narayanan Thulasi-Raman
- Sri Paramakalyani Centre for Excellence in Environmental Sciences, Manonmaniam Sundaranar University, Alwarkurichi, Tirunelveli, 627 412, Tamil-Nadu, India
| | - Guilherme Malafaia
- Post-Graduation Program in Ecology, Conservation, and Biodiversity, Federal University of Uberlândia, Uberlândia, MG, Brazil; Laboratory of Toxicology Applied to the Environment, Goiano Federal Institute - Urutaí Campus, Rodovia Geraldo Silva Nascimento, 2,5 Km, Zona Rural, Urutaí, GO, Brazil
| | - Sengottayan Senthil-Nathan
- Sri Paramakalyani Centre for Excellence in Environmental Sciences, Manonmaniam Sundaranar University, Alwarkurichi, Tirunelveli, 627 412, Tamil-Nadu, India.
| | - Jaroslaw Prockow
- Department of Plant Biology, Institute of Environmental Biology, Wrocław University of Environmental and Life Sciences, Ul. Kożuchowska 7a, 51-631, Wrocław, Poland
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Kempa M, Mikołajczak K, Ogrodowicz P, Pniewski T, Krajewski P, Kuczyńska A. The impact of multiple abiotic stresses on ns-LTP2.8 gene transcript and ns-LTP2.8 protein accumulation in germinating barley (Hordeum vulgare L.) embryos. PLoS One 2024; 19:e0299400. [PMID: 38502680 PMCID: PMC10950244 DOI: 10.1371/journal.pone.0299400] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 02/09/2024] [Indexed: 03/21/2024] Open
Abstract
Abiotic stresses occur more often in combination than alone under regular field conditions limiting in more severe way crop production. Stress recognition in plants primarily occurs in the plasma membrane, modification of which is necessary to maintain homeostasis in response to it. It is known that lipid transport proteins (ns-LTPs) participate in modification of the lipidome of cell membranes. Representative of this group, ns-LTP2.8, may be involved in the reaction to abiotic stress of germinating barley plants by mediating the intracellular transport of hydrophobic particles, such as lipids, helping to maintain homeostasis. The ns-LTP2.8 protein was selected for analysis due to its ability to transport not only linear hydrophobic molecules but also compounds with a more complex spatial structure. Moreover, ns-LTP2.8 has been qualified as a member of pathogenesis-related proteins, which makes it particularly important in relation to its high allergenic potential. This paper demonstrates for the first time the influence of various abiotic stresses acting separately as well as in their combinations on the change in the ns-LTP2.8 transcript, ns-LTP2.8 protein and total soluble protein content in the embryonal axes of germinating spring barley genotypes with different ns-LTP2.8 allelic forms and stress tolerance. Tissue localization of ns-LTP2.8 transcript as well as ns-LTP2.8 protein were also examined. Although the impact of abiotic stresses on the regulation of gene transcription and translation processes remains not fully recognized, in this work we managed to demonstrate different impact on applied stresses on the fundamental cellular processes in very little studied tissue of the embryonal axis of barley.
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Affiliation(s)
- Michał Kempa
- Institute of Plant Genetics, Polish Academy of Sciences, Poznan, Poland
| | | | - Piotr Ogrodowicz
- Institute of Plant Genetics, Polish Academy of Sciences, Poznan, Poland
| | - Tomasz Pniewski
- Institute of Plant Genetics, Polish Academy of Sciences, Poznan, Poland
| | - Paweł Krajewski
- Institute of Plant Genetics, Polish Academy of Sciences, Poznan, Poland
| | - Anetta Kuczyńska
- Institute of Plant Genetics, Polish Academy of Sciences, Poznan, Poland
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Habibpourmehraban F, Masoomi-Aladizgeh F, Haynes PA. Effect of ABA Pre-Treatment on Rice Plant Transcriptome Response to Multiple Abiotic Stress. Biomolecules 2023; 13:1554. [PMID: 37892236 PMCID: PMC10604926 DOI: 10.3390/biom13101554] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 10/17/2023] [Accepted: 10/18/2023] [Indexed: 10/29/2023] Open
Abstract
Half of the world's population depends on rice plant cultivation, yet environmental stresses continue to substantially impact the production of one of our most valuable staple foods. The aim of this study was to investigate the changes in the transcriptome of the IAC1131 rice genotype when exposed to a suite of multiple abiotic stresses, either with or without pre-treatment with the plant hormone ABA (Abscisic acid). Four groups of IAC1131 rice plants were grown including control plants incubated with ABA, non-ABA-incubated control plants, stressed plants incubated with ABA, and non-ABA-incubated stressed plants, with leaf samples harvested after 0 days (control) and 4 days (stressed). We found that high concentrations of ABA applied exogenously to the control plants under normal conditions did not alter the IAC1131 transcriptome profile significantly. The observed changes in the transcriptome of the IAC1131 plants in response to multiple abiotic stress were made even more pronounced by ABA pre-treatment, which induced the upregulation of a significant number of additional genes. Although ABA application impacted the plant transcriptome, multiple abiotic stress was the dominant factor in modifying gene expression in the IAC1131 plants. Exogenous ABA application may mitigate the effects of stress through ABA-dependent signalling pathways related to biological photosynthesis functions. Pre-treatment with ABA alters the photosynthesis function negatively by reducing stomatal conductance, therefore helping plants to conserve the energy required for survival under unfavourable environmental conditions.
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Affiliation(s)
- Fatemeh Habibpourmehraban
- School of Natural Sciences, Macquarie University, North Ryde, NSW 2109, Australia; (F.H.); (F.M.-A.)
- Biomolecular Discovery Research Centre, Macquarie University, North Ryde, NSW 2109, Australia
| | - Farhad Masoomi-Aladizgeh
- School of Natural Sciences, Macquarie University, North Ryde, NSW 2109, Australia; (F.H.); (F.M.-A.)
- Biomolecular Discovery Research Centre, Macquarie University, North Ryde, NSW 2109, Australia
| | - Paul A. Haynes
- School of Natural Sciences, Macquarie University, North Ryde, NSW 2109, Australia; (F.H.); (F.M.-A.)
- Biomolecular Discovery Research Centre, Macquarie University, North Ryde, NSW 2109, Australia
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Habibpourmehraban F, Wu Y, Masoomi-Aladizgeh F, Amirkhani A, Atwell BJ, Haynes PA. Pre-Treatment of Rice Plants with ABA Makes Them More Tolerant to Multiple Abiotic Stress. Int J Mol Sci 2023; 24:ijms24119628. [PMID: 37298579 DOI: 10.3390/ijms24119628] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Revised: 05/26/2023] [Accepted: 05/29/2023] [Indexed: 06/12/2023] Open
Abstract
Multiple abiotic stress is known as a type of environmental unfavourable condition maximizing the yield and growth gap of crops compared with the optimal condition in both natural and cultivated environments. Rice is the world's most important staple food, and its production is limited the most by environmental unfavourable conditions. In this study, we investigated the pre-treatment of abscisic acid (ABA) on the tolerance of the IAC1131 rice genotype to multiple abiotic stress after a 4-day exposure to combined drought, salt and extreme temperature treatments. A total of 3285 proteins were identified and quantified across the four treatment groups, consisting of control and stressed plants with and without pre-treatment with ABA, with 1633 of those proteins found to be differentially abundant between groups. Compared with the control condition, pre-treatment with the ABA hormone significantly mitigated the leaf damage against combined abiotic stress at the proteome level. Furthermore, the application of exogenous ABA did not affect the proteome profile of the control plants remarkably, while the results were different in stress-exposed plants by a greater number of proteins changed in abundance, especially those which were increased. Taken together, these results suggest that exogenous ABA has a potential priming effect for enhancing the rice seedlings' tolerance against combined abiotic stress, mainly by affecting stress-responsive mechanisms dependent on ABA signalling pathways in plants.
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Affiliation(s)
- Fatemeh Habibpourmehraban
- School of Natural Sciences, Macquarie University, North Ryde, NSW 2109, Australia
- Biomolecular Discovery Research Centre, Macquarie University, North Ryde, NSW 2109, Australia
| | - Yunqi Wu
- School of Natural Sciences, Macquarie University, North Ryde, NSW 2109, Australia
- Australian Proteome Analysis Facility (APAF), Macquarie University, North Ryde, NSW 2109, Australia
| | - Farhad Masoomi-Aladizgeh
- School of Natural Sciences, Macquarie University, North Ryde, NSW 2109, Australia
- Biomolecular Discovery Research Centre, Macquarie University, North Ryde, NSW 2109, Australia
| | - Ardeshir Amirkhani
- School of Natural Sciences, Macquarie University, North Ryde, NSW 2109, Australia
- Australian Proteome Analysis Facility (APAF), Macquarie University, North Ryde, NSW 2109, Australia
| | - Brian J Atwell
- School of Natural Sciences, Macquarie University, North Ryde, NSW 2109, Australia
- Biomolecular Discovery Research Centre, Macquarie University, North Ryde, NSW 2109, Australia
| | - Paul A Haynes
- School of Natural Sciences, Macquarie University, North Ryde, NSW 2109, Australia
- Biomolecular Discovery Research Centre, Macquarie University, North Ryde, NSW 2109, Australia
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Sperotto RA, Ricachenevsky FK, Waters ER, Bai G, Arasimowicz-Jelonek M. Editorial: Identification and characterization of contrasting genotypes/cultivars to discover novel players in crop responses to abiotic/biotic stresses, volume II. FRONTIERS IN PLANT SCIENCE 2022; 13:1105598. [PMID: 36605958 PMCID: PMC9808395 DOI: 10.3389/fpls.2022.1105598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Accepted: 12/12/2022] [Indexed: 06/17/2023]
Affiliation(s)
- Raul A. Sperotto
- Graduate Program in Biotechnology, Life Sciences Area, University of Taquari Valley - Univates, Lajeado, Brazil
- Graduate Program in Plant Physiology, Federal University of Pelotas, Pelotas, Brazil
| | - Felipe K. Ricachenevsky
- Graduate Program in Cell and Molecular Biology, Botany Department, Federal University of Rio Grande do Sul, Porto Alegre, Brazil
| | - Elizabeth R. Waters
- Department of Biology, San Diego State University, San Diego, CA, United States
| | - Guihua Bai
- USDA-ARS Hard Winter Wheat Genetics Research Unit, Manhattan, KS, United States
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Unique and Shared Proteome Responses of Rice Plants ( Oryza sativa) to Individual Abiotic Stresses. Int J Mol Sci 2022; 23:ijms232415552. [PMID: 36555193 PMCID: PMC9778788 DOI: 10.3390/ijms232415552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Revised: 12/05/2022] [Accepted: 12/05/2022] [Indexed: 12/13/2022] Open
Abstract
Food safety of staple crops such as rice is of global concern and is at the top of the policy agenda worldwide. Abiotic stresses are one of the main limitations to optimizing yields for sustainability, food security and food safety. We analyzed proteome changes in Oryza sativa cv. Nipponbare in response to five adverse abiotic treatments, including three levels of drought (mild, moderate, and severe), soil salinization, and non-optimal temperatures. All treatments had modest, negative effects on plant growth, enabling us to identify proteins that were common to all stresses, or unique to one. More than 75% of the total of differentially abundant proteins in response to abiotic stresses were specific to individual stresses, while fewer than 5% of stress-induced proteins were shared across all abiotic constraints. Stress-specific and non-specific stress-responsive proteins identified were categorized in terms of core biological processes, molecular functions, and cellular localization.
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Ramkumar MK, Mulani E, Jadon V, Sureshkumar V, Krishnan SG, Senthil Kumar S, Raveendran M, Singh AK, Solanke AU, Singh NK, Sevanthi AM. Identification of major candidate genes for multiple abiotic stress tolerance at seedling stage by network analysis and their validation by expression profiling in rice ( Oryza sativa L.). 3 Biotech 2022; 12:127. [PMID: 35573803 DOI: 10.1007/s13205-022-03182-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2021] [Accepted: 04/03/2022] [Indexed: 11/01/2022] Open
Abstract
A wealth of microarray and RNA-seq data for studying abiotic stress tolerance in rice exists but only limited studies have been carried out on multiple stress-tolerance responses and mechanisms. In this study, we identified 6657 abiotic stress-responsive genes pertaining to drought, salinity and heat stresses from the seedling stage microarray data of 83 samples and used them to perform unweighted network analysis and to identify key hub genes or master regulators for multiple abiotic stress tolerance. Of the total 55 modules identified from the analysis, the top 10 modules with 8-61 nodes comprised 239 genes. From these 10 modules, 10 genes common to all the three stresses were selected. Further, based on the centrality properties and highly dense interactions, we identified 7 intra-modular hub genes leading to a total of 17 potential candidate genes. Out of these 17 genes, 15 were validated by expression analysis using a panel of 4 test genotypes and a pair of standard check genotypes for each abiotic stress response. Interestingly, all the 15 genes showed upregulation under all stresses and in all the genotypes, suggesting that they could be representing some of the core abiotic stress-responsive genes. More pertinently, eight of the genes were found to be co-localized with the stress-tolerance QTL regions. Thus, in conclusion, our study not only provided an effective approach for studying abiotic stress tolerance in rice, but also identified major candidate genes which could be further validated by functional genomics for abiotic stress tolerance. Supplementary Information The online version contains supplementary material available at 10.1007/s13205-022-03182-7.
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Liu Y, Khan AR, Gan Y. C2H2 Zinc Finger Proteins Response to Abiotic Stress in Plants. Int J Mol Sci 2022; 23:ijms23052730. [PMID: 35269875 PMCID: PMC8911255 DOI: 10.3390/ijms23052730] [Citation(s) in RCA: 47] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Revised: 02/25/2022] [Accepted: 02/26/2022] [Indexed: 12/14/2022] Open
Abstract
Abiotic stresses have already exhibited the negative effects on crop growth and development, thereby influencing crop quality and yield. Therefore, plants have developed regulatory mechanisms to adopt against such harsh changing environmental conditions. Recent studies have shown that zinc finger protein transcription factors play a crucial role in plant growth and development as well as in stress response. C2H2 zinc finger proteins are one of the best-studied types and have been shown to play diverse roles in the plant abiotic stress responses. However, the C2H2 zinc finger network in plants is complex and needs to be further studied in abiotic stress responses. Here in this review, we mainly focus on recent findings on the regulatory mechanisms, summarize the structural and functional characterization of C2H2 zinc finger proteins, and discuss the C2H2 zinc finger proteins involved in the different signal pathways in plant responses to abiotic stress.
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Affiliation(s)
- Yihua Liu
- College of Agriculture and Forestry Sciences, Linyi University, Linyi 276000, China
- Correspondence: (Y.L.); (Y.G.)
| | - Ali Raza Khan
- Zhejiang Key Lab of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China;
| | - Yinbo Gan
- Zhejiang Key Lab of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China;
- Correspondence: (Y.L.); (Y.G.)
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