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Tang Y, Rong H, Jia X, Chen Y, Wang Z, Wei J, Yang C, Liu J, Wang M, Yu H, Wang Q. Unveiling the molecular symphony: MicroRNA160a-Auxin Response Factor 18 module orchestrates low potassium tolerance in banana (Musa acuminata L.). PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 350:112288. [PMID: 39396617 DOI: 10.1016/j.plantsci.2024.112288] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2024] [Revised: 08/16/2024] [Accepted: 10/10/2024] [Indexed: 10/15/2024]
Abstract
Potassium (K) is an essential nutrient for the growth and development of most plants. In banana (Musa acuminata L.), microRNA160a (miR160a) is suggested to potentially contribute to the response to low K+ stress by modulating the auxin signaling pathway. However, further investigation is required to elucidate its specific regulatory mechanism. This study presents evidence highlighting the critical role of the miR160a-Auxin Response Factor 18 (ARF18) module in conferring low K+ tolerance in banana. Both miR160a and its predicted target gene ARF18 displayed elevated expression levels in banana roots, with their expression profiles significantly altered under low K+ stress. The inhibitory effect of mac-miR160a on the expression of MaARF18-like-2 was confirmed through tobacco transient transformation and dual-Luciferase reporter assay. Surprisingly, Arabidopsis lines overexpressing mac-miR160a (mac-miR160a OE) exhibited enhanced tolerance to low K+ stress. Conversely, Arabidopsis lines overexpressing MaARF18-like-2 (MaARF18-like-2 OE) displayed increased sensitivity to K+ deficiency. Additionally, RNA sequencing (RNA-seq) analysis revealed that MaARF18-like-2 mediates the response of Arabidopsis to low K+ stress by influencing the expression of genes associated with Ca2+, ion transport, and reactive oxygen species (ROS) signaling. In conclusion, our study provides novel insights into the molecular mechanism of the miR160a-ARF18-like-2 module in the plant response to low K+ stress.
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Affiliation(s)
- Yi Tang
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China
| | - Hang Rong
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China
| | - Xingchen Jia
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China
| | - Yinglong Chen
- The UWA Institute of Agriculture, and School of Agriculture and Environment, The University of Western Australia, Perth, WA 6009, Australia
| | - Zishu Wang
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China
| | - Jinyi Wei
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China
| | - Chenyi Yang
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China
| | - Jianfu Liu
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China
| | - Mingyuan Wang
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China.
| | - Hailing Yu
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China.
| | - Qizhi Wang
- Institute of Horticulture Science and Engineering, Huaqiao University, Xiamen 361021, China.
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Swain N, Sahoo RK, Jeughale KP, Sarkar S, Selvaraj S, Parameswaran C, Katara J, Bose LK, Samantaray S. Rice homolog of Arabidopsis Xylem NAC domain 1 (OsXND1), a NAC transcription factor regulates drought stress responsive root system architecture in indica rice. Mol Genet Genomics 2024; 299:94. [PMID: 39369362 DOI: 10.1007/s00438-024-02178-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2024] [Accepted: 08/25/2024] [Indexed: 10/07/2024]
Abstract
Rice yield is greatly constrained by drought stress. In Arabidopsis, XYLEM NAC DOMAIN 1 (XND1) gene regulates the xylem formation, efficiency of water transport, and the delicate equilibrium between drought tolerance and resistance to pathogens. However, diversity and the role of rice homologs of OsXND1 is not reported so far. This study hypothesized that the rice homolog of OsXND1 also regulates drought stress tolerance through modulation of root architecture. Initially, phylogenetic analysis identified two OsXND1 homologs (Os02g0555300 and Os04g0437000) in rice. Further, 14 haplotypes were identified in the OsXND1 of which Hap1 and Hap3 were major haplotypes. The association analysis of OsXND1 with 16 different traits, including 10 root traits, showed three SNPs (Chr02:20972728-Promoter variant; Chr02:20972791-5' UTR variant, and Chr02:20973745-3' UTR variant) were significantly associated with root area, root surface area, total root length, and convex hull area only under drought stress in indica rice. Besides, the superior haplotype of OsXND1 increased the root area, root surface area, total root length, and convex hull area by 46%, 40%, 38%, and 42%, respectively, under drought stress conditions. Therefore, the identified superior haplotype of OsXND1 can be utilized in haplotype breeding programs for the improvement of drought tolerance in rice.
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Affiliation(s)
- Nibedita Swain
- Crop Improvement Division, ICAR-National Rice Research Institute, Cuttack, 753006, India
- Department of Botany and Biotechnology, Ravenshaw University, Cuttack, 753003, Odisha, India
| | - Raj Kishore Sahoo
- Crop Improvement Division, ICAR-National Rice Research Institute, Cuttack, 753006, India
- Department of Botany and Biotechnology, Ravenshaw University, Cuttack, 753003, Odisha, India
| | - Kishor P Jeughale
- Crop Improvement Division, ICAR-National Rice Research Institute, Cuttack, 753006, India
| | - Suman Sarkar
- Crop Improvement Division, ICAR-National Rice Research Institute, Cuttack, 753006, India
| | - Sabarinathan Selvaraj
- Crop Improvement Division, ICAR-National Rice Research Institute, Cuttack, 753006, India
| | - C Parameswaran
- Crop Improvement Division, ICAR-National Rice Research Institute, Cuttack, 753006, India.
| | - Jawaharlal Katara
- Crop Improvement Division, ICAR-National Rice Research Institute, Cuttack, 753006, India
| | - Lotan K Bose
- Crop Improvement Division, ICAR-National Rice Research Institute, Cuttack, 753006, India
| | - Sanghamitra Samantaray
- Crop Improvement Division, ICAR-National Rice Research Institute, Cuttack, 753006, India.
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Yang LT, Chen LS. Stress Physiology and Molecular Biology of Fruit Crops. Int J Mol Sci 2024; 25:706. [PMID: 38255779 PMCID: PMC10815834 DOI: 10.3390/ijms25020706] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2023] [Revised: 12/29/2023] [Accepted: 12/29/2023] [Indexed: 01/24/2024] Open
Abstract
Fruit crops provide various kinds of fruit commodities that are of significant nutritional benefit and economic value to humans [...].
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Affiliation(s)
- Lin-Tong Yang
- College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Li-Song Chen
- College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China
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