Personal Heart Health Monitoring Based on 1D Convolutional Neural Network

Artificial Intelligence-Driven Analysis of Antimicrobial-Resistant and Biofilm-Forming Pathogens on Biotic and Abiotic Surfaces

The growing threat of antimicrobial-resistant (AMR) pathogens to human health worldwide emphasizes the need for more effective infection control strategies. Bacterial and fungal biofilms pose a major challenge in treating AMR pathogen infections. Biofilms are formed by pathogenic microbes encased in extracellular polymeric substances to confer protection from antimicrobials and the host immune system. Biofilms also promote the growth of antibiotic-resistant mutants and latent persister cells and thus complicate therapeutic approaches. Biofilms are ubiquitous and cause serious health risks due to their ability to colonize various surfaces, including human tissues, medical devices, and food-processing equipment. Detection and characterization of biofilms are crucial for prompt intervention and infection control. To this end, traditional approaches are often effective, yet they fail to identify the microbial species inside biofilms. Recent advances in artificial intelligence (AI) have provided new avenues to improve biofilm identification. Machine-learning algorithms and image-processing techniques have shown promise for the accurate and efficient detection of biofilm-forming microorganisms on biotic and abiotic surfaces. These advancements have the potential to transform biofilm research and clinical practice by allowing faster diagnosis and more tailored therapy. This comprehensive review focuses on the application of AI techniques for the identification of biofilm-forming pathogens in various industries, including healthcare, food safety, and agriculture. The review discusses the existing approaches, challenges, and potential applications of AI in biofilm research, with a particular focus on the role of AI in improving diagnostic capacities and guiding preventative actions. The synthesis of the current knowledge and future directions, as described in this review, will guide future research and development efforts in combating biofilm-associated infections.

A Deep Learning Approach for Atrial Fibrillation Classification Using Multi-Feature Time Series Data from ECG and PPG

Atrial fibrillation is a prevalent cardiac arrhythmia that poses significant health risks to patients. The use of non-invasive methods for AF detection, such as Electrocardiogram and Photoplethysmogram, has gained attention due to their accessibility and ease of use. However, there are challenges associated with ECG-based AF detection, and the significance of PPG signals in this context has been increasingly recognized. The limitations of ECG and the untapped potential of PPG are taken into account as this work attempts to classify AF and non-AF using PPG time series data and deep learning. In this work, we emploted a hybrid deep neural network comprising of 1D CNN and BiLSTM for the task of AF classification. We addressed the under-researched area of applying deep learning methods to transmissive PPG signals by proposing a novel approach. Our approach involved integrating ECG and PPG signals as multi-featured time series data and training deep learning models for AF classification. Our hybrid 1D CNN and BiLSTM model achieved an accuracy of 95% on test data in identifying atrial fibrillation, showcasing its strong performance and reliable predictive capabilities. Furthermore, we evaluated the performance of our model using additional metrics. The precision of our classification model was measured at 0.88, indicating its ability to accurately identify true positive cases of AF. The recall, or sensitivity, was measured at 0.85, illustrating the model's capacity to detect a high proportion of actual AF cases. Additionally, the F1 score, which combines both precision and recall, was calculated at 0.84, highlighting the overall effectiveness of our model in classifying AF and non-AF cases.

Method for Solving Difficulties in Rhythm Classification Caused by Few Samples and Similar Characteristics in Electrocardiograms

A method for accurately analyzing electrocardiograms (ECGs), which are obtained from electrical signals generated by cardiac activity, is essential in heart disease diagnosis. However, rhythms are typically obtained with relatively few data samples and similar characteristics, making them difficult to classify. To solve these issues, we proposed a novel method that distinguishes a given ECG rhythm using a beat score map (BSM) image. Through the proposed method, the associations between beats and previously used features, such as the R-R interval, were considered. Rhythm classification was implemented by training a convolutional neural network model and using transfer learning with the created BSM image. As a result, the proposed method for ECG rhythms with small data samples showed significant results. It also showed good performance in differentiating atrial fibrillation (AFIB) and atrial flutter (AFL) rhythms, which are difficult to distinguish due to their similar characteristics. The performance for rhythms with a small number of samples of the proposed method is 20% better than an existing method. In addition, the performance based on the F-1 score for classifying AFIB and AFL of the proposed method is 30% better than the existing method. This study solved the previous limitations caused by small sample numbers and similar rhythms.

An intelligent non-invasive system for automated diagnosis of anemia exploiting a novel dataset

Anemia is a condition in which the oxygen-carrying capacity of red blood cells is insufficient to meet the body's physiological needs. It affects billions of people worldwide. An early diagnosis of this disease could prevent the advancement of other disorders. Traditional methods used to detect anemia consist of venipuncture, which requires a patient to frequently undergo laboratory tests. Therefore, anemia diagnosis using noninvasive and cost-effective methods is an open challenge. The pallor of the fingertips, palms, nail beds, and eye conjunctiva can be observed to establish whether a patient suffers from anemia. This article addresses the above challenges by presenting a novel intelligent system, based on machine learning, that supports the automated diagnosis of anemia. This system is innovative from different points of view. Specifically, it has been trained on a dataset that contains eye conjunctiva photos of Indian and Italian patients. This dataset, which was created using a very strict experimental set, is now made available to the Scientific Community. Moreover, compared to previous systems in the literature, the proposed system uses a low-cost device, which makes it suitable for widespread use. The performance of the learning algorithms utilizing two different areas of the mucous membrane of the eye is discussed. In particular, the RUSBoost algorithm, when appropriately trained on palpebral conjunctiva images, shows good performance in classifying anemic and nonanemic patients. The results are very robust, even when considering different ethnicities.

The Short-Term Prediction of Length of Day Using 1D Convolutional Neural Networks (1D CNN)

Accurate Earth orientation parameter (EOP) predictions are needed for many applications, e.g., for the tracking and navigation of interplanetary spacecraft missions. One of the most difficult parameters to forecast is the length of day (LOD), which represents the variation in the Earth's rotation rate since it is primarily affected by the torques associated with changes in atmospheric circulation. In this study, a new-generation time-series prediction algorithm is developed. The one-dimensional convolutional neural network (1D CNN), which is one of the deep learning methods, is introduced to model and predict the LOD using the IERS EOP 14 C04 and axial Z component of the atmospheric angular momentum (AAM), which was taken from the German Research Centre for Geosciences (GFZ) since it is strongly correlated with the LOD changes. The prediction procedure operates as follows: first, we detrend the LOD and Z-component series using the LS method, then, we obtain the residual series of each one to be used in the 1D CNN prediction algorithm. Finally, we analyze the results before and after introducing the AAM function. The results prove the potential of the proposed method as an optimal algorithm to successfully reconstruct and predict the LOD for up to 7 days.

State-of-the-art Deep Learning Methods on Electrocardiogram Data: A Systematic Review (Preprint)

Background

Electrocardiogram (ECG) is one of the most common noninvasive diagnostic tools that can provide useful information regarding a patient’s health status. Deep learning (DL) is an area of intense exploration that leads the way in most attempts to create powerful diagnostic models based on physiological signals.

Objective

This study aimed to provide a systematic review of DL methods applied to ECG data for various clinical applications.

Methods

The PubMed search engine was systematically searched by combining “deep learning” and keywords such as “ecg,” “ekg,” “electrocardiogram,” “electrocardiography,” and “electrocardiology.” Irrelevant articles were excluded from the study after screening titles and abstracts, and the remaining articles were further reviewed. The reasons for article exclusion were manuscripts written in any language other than English, absence of ECG data or DL methods involved in the study, and absence of a quantitative evaluation of the proposed approaches.

Results

We identified 230 relevant articles published between January 2020 and December 2021 and grouped them into 6 distinct medical applications, namely, blood pressure estimation, cardiovascular disease diagnosis, ECG analysis, biometric recognition, sleep analysis, and other clinical analyses. We provide a complete account of the state-of-the-art DL strategies per the field of application, as well as major ECG data sources. We also present open research problems, such as the lack of attempts to address the issue of blood pressure variability in training data sets, and point out potential gaps in the design and implementation of DL models.

Conclusions

We expect that this review will provide insights into state-of-the-art DL methods applied to ECG data and point to future directions for research on DL to create robust models that can assist medical experts in clinical decision-making.

Deep learning-based electrocardiogram rhythm and beat features for heart abnormality classification

BACKGROUND

Electrocardiogram (ECG) signal classification plays a critical role in the automatic diagnosis of heart abnormalities. While most ECG signal patterns cannot be recognized by a human interpreter, they can be detected with precision using artificial intelligence approaches, making the ECG a powerful non-invasive biomarker. However, performing rapid and accurate ECG signal classification is difficult due to the low amplitude, complexity, and non-linearity. The widely-available deep learning (DL) method we propose has presented an opportunity to substantially improve the accuracy of automated ECG classification analysis using rhythm or beat features. Unfortunately, a comprehensive and general evaluation of the specific DL architecture for ECG analysis across a wide variety of rhythm and beat features has not been previously reported. Some previous studies have been concerned with detecting ECG class abnormalities only through rhythm or beat features separately.

METHODS

This study proposes a single architecture based on the DL method with one-dimensional convolutional neural network (1D-CNN) architecture, to automatically classify 24 patterns of ECG signals through both rhythm and beat. To validate the proposed model, five databases which consisted of nine-class of ECG-base rhythm and 15-class of ECG-based beat were used in this study. The proposed DL network was applied and studied with varying datasets with different frequency samplings in intra and inter-patient scheme.

RESULTS

Using a 10-fold cross-validation scheme, the performance results had an accuracy of 99.98%, a sensitivity of 99.90%, a specificity of 99.89%, a precision of 99.90%, and an F1-score of 99.99% for ECG rhythm classification. Additionally, for ECG beat classification, the model obtained an accuracy of 99.87%, a sensitivity of 96.97%, a specificity of 99.89%, a precision of 92.23%, and an F1-score of 94.39%. In conclusion, this study provides clinicians with an advanced methodology for detecting and discriminating heart abnormalities between different ECG rhythm and beat assessments by using one outstanding proposed DL architecture.

A Novel Methodology for Measuring the Abstraction Capabilities of Image Recognition Algorithms

Creating a widely excepted model on the measure of intelligence became inevitable due to the existence of an abundance of different intelligent systems. Measuring intelligence would provide feedback for the developers and ultimately lead us to create better artificial systems. In the present paper, we show a solution where learning as a process is examined, aiming to detect pre-written solutions and separate them from the knowledge acquired by the system. In our approach, we examine image recognition software by executing different transformations on objects and detect if the software was resilient to it. A system with the required intelligence is supposed to become resilient to the transformation after experiencing it several times. The method is successfully tested on a simple neural network, which is not able to learn most of the transformations examined. The method can be applied to any image recognition software to test its abstraction capabilities.

Rezende M, G. C. Bianchi A, M. Carneiro C, J. S. Luz E, J. P. Moreira G, M. Ushizima D, N. S. de Medeiros F, J. F. Souza M. A Deep Learning Ensemble Method to Assist Cytopathologists in Pap Test Image Classification

In recent years, deep learning methods have outperformed previous state-of-the-art machine learning techniques for several problems, including image classification. Classifying cells in Pap smear images is very challenging, and it is still of paramount importance for cytopathologists. The Pap test is a cervical cancer prevention test that tracks preneoplastic changes in cervical epithelial cells. Carrying out this exam is important in that early detection. It is directly related to a greater chance of curing or reducing the number of deaths caused by the disease. The analysis of Pap smears is exhaustive and repetitive, as it is performed manually by cytopathologists. Therefore, a tool that assists cytopathologists is needed. This work considers 10 deep convolutional neural networks and proposes an ensemble of the three best architectures to classify cervical cancer upon cell nuclei and reduce the professionals' workload. The dataset used in the experiments is available in the Center for Recognition and Inspection of Cells (CRIC) Searchable Image Database. Considering the metrics of precision, recall, F1-score, accuracy, and sensitivity, the proposed ensemble improves previous methods shown in the literature for two- and three-class classification. We also introduce the six-class classification outcome.

Deep Learning in Medical Image Analysis

Over recent years, deep learning (DL) has established itself as a powerful tool across a broad spectrum of domains in imaging-e [...].