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Ibáñez A, Garrido-Chamorro S, Coque JJR, Barreiro C. From Genes to Bioleaching: Unraveling Sulfur Metabolism in Acidithiobacillus Genus. Genes (Basel) 2023; 14:1772. [PMID: 37761912 PMCID: PMC10531304 DOI: 10.3390/genes14091772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2023] [Revised: 09/04/2023] [Accepted: 09/05/2023] [Indexed: 09/29/2023] Open
Abstract
Sulfur oxidation stands as a pivotal process within the Earth's sulfur cycle, in which Acidithiobacillus species emerge as skillful sulfur-oxidizing bacteria. They are able to efficiently oxidize several reduced inorganic sulfur compounds (RISCs) under extreme conditions for their autotrophic growth. This unique characteristic has made these bacteria a useful tool in bioleaching and biological desulfurization applications. Extensive research has unraveled diverse sulfur metabolism pathways and their corresponding regulatory systems. The metabolic arsenal of the Acidithiobacillus genus includes oxidative enzymes such as: (i) elemental sulfur oxidation enzymes, like sulfur dioxygenase (SDO), sulfur oxygenase reductase (SOR), and heterodisulfide reductase (HDR-like system); (ii) enzymes involved in thiosulfate oxidation pathways, including the sulfur oxidation (Sox) system, tetrathionate hydrolase (TetH), and thiosulfate quinone oxidoreductase (TQO); (iii) sulfide oxidation enzymes, like sulfide:quinone oxidoreductase (SQR); and (iv) sulfite oxidation pathways, such as sulfite oxidase (SOX). This review summarizes the current state of the art of sulfur metabolic processes in Acidithiobacillus species, which are key players of industrial biomining processes. Furthermore, this manuscript highlights the existing challenges and barriers to further exploring the sulfur metabolism of this peculiar extremophilic genus.
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Affiliation(s)
- Ana Ibáñez
- Instituto de Investigación de la Viña y el Vino, Escuela de Ingeniería Agraria, Universidad de León, 24009 León, Spain; (A.I.); (J.J.R.C.)
- Instituto Tecnológico Agrario de Castilla y León (ITACyL), Área de Investigación Agrícola, 47071 Valladolid, Spain
| | - Sonia Garrido-Chamorro
- Área de Bioquímica y Biología Molecular, Departamento de Biología Molecular, Universidad de León, 24007 León, Spain;
| | - Juan J. R. Coque
- Instituto de Investigación de la Viña y el Vino, Escuela de Ingeniería Agraria, Universidad de León, 24009 León, Spain; (A.I.); (J.J.R.C.)
| | - Carlos Barreiro
- Área de Bioquímica y Biología Molecular, Departamento de Biología Molecular, Universidad de León, 24007 León, Spain;
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Zhang X, Zhang S, Huang T, Jin Z. Copper extraction from low-grade chalcopyrite in a bioleaching column assisted by bioelectrochemical system. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:35459-35470. [PMID: 35050470 DOI: 10.1007/s11356-021-18283-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Accepted: 12/19/2021] [Indexed: 06/14/2023]
Abstract
Low-grade ores, tailings, and solid wastes contain small amounts of valuable heavy metals. Improper disposal of these substances results in the waste of resources and contamination of soil or groundwater. Accordingly, the treatment and recycling of low-grade ores, tailings, and solid wastes attracted much attention recently. Bioelectrochemical system, an innovative technology for the removal and recovery of heavy metals, has been further developed and applied in recent years. In the current study, the low-grade chalcopyrite was bioleached with the assistance of microbial fuel cells. Copper extraction along with electricity generation from the low-grade chalcopyrite was achieved in the column bioleaching process assisted by MFCs. Results showed that after 197 days bioleaching of low-grade chalcopyrite, 423.9 mg copper was extracted from 200 g low-grade chalcopyrite and the average coulomb production reached 1.75 C/d. The introduction of MFCs into bioleaching processes promoted the copper extraction efficiency by 2.7 times (3.62% vs. 1.33%), mainly via promoting ferrous oxidation, reducing ORP, and stimulating bacterial growth. This work provides a feasible method for the treatment and recycling of low-grade ores, tailings, and solid wastes. But balancing energy consumption of aeration and circulation frequency and chemical consumption of acid to improve the copper extraction efficiency need further investigation.
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Affiliation(s)
- Xueming Zhang
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430000, China
| | - Shaohui Zhang
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430000, China.
- Hubei Key Laboratory of Fuel Cell, Wuhan University of Technology, Wuhan, 430000, China.
| | - Tao Huang
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430000, China
| | - Zhixin Jin
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430000, China
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Mechanism analysis on synergistic leaching of uranium from pyrite oxidized by Acidithiobacillus ferrivorans. J Radioanal Nucl Chem 2021. [DOI: 10.1007/s10967-021-08026-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Abstract
The dissolution of copper sulphide ores continues to be a challenge for the copper industry. Several media and leaching alternatives have been proposed to improve the dissolution of these minerals, especially for the leaching of chalcopyrite. Among the alternatives, pretreatment prior to leaching was proposed as an option that increases the dissolution of copper from sulphide ores. In this study, a mineral sample from a copper mining company was used. The copper grade of the sample was 0.79%, and its main contributor was chalcopyrite (84%). The effect of curing time (as pretreatment) in a chloride media on copper sulphide ore was evaluated at various temperatures: 25, 50, 70 and 90 °C. The pretreated sample and leaching residues were characterized by X-ray diffraction, scanning electron microscopy, and reflected light microscopy. Pretreatment products such as CuSO4, NaFe3(SO4)2(OH)6, and S0 were identified although with difficulty, due to the low presence of chalcopyrite in the initial sample (1.99%). Under the conditions of 15 kg/t of H2SO4, 25 kg/t of NaCl, and 15 days of curing time, a copper extraction of 93.1% was obtained at 90 °C with 50 g/L of Cl− and 0.2 M of H2SO4.
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Abstract
Although the main cause of hydrometallurgical plant closures is the depletion of oxidized copper minerals reserves, the lack of new hydrometallurgy projects also contributes to these closures. One solution is to be able to process copper sulphide ores hydrometallurgically. However, it is widely known that sulphide copper ores—and chalcopyrite in particular—have very slow dissolution kinetics in traditional leaching systems. An alternative to improve the extraction of copper from sulphide ores is the use of a pretreatment process. Several investigations were developed evaluating the effects of pretreatment, mainly in the extraction of copper from chalcopyrite in chloride media. This study presents a review of various pretreatment methods prior to heap leaching to aid in the dissolution of copper from sulphide ores. Different variables of pretreatment that affect the extraction of copper were identified, including the type of salts used in agglomeration, curing time, and curing temperatures. Successful cases such as the implementation of the CuproChlor® process (use of calcium chloride), and various pilot studies using sodium chloride and temperature, show that pretreatment is an alternative that aids in the dissolution of copper from sulphide ores.
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Peng T, Liao W, Wang J, Miao J, Peng Y, Gu G, Wu X, Qiu G, Zeng W. Bioleaching and Electrochemical Behavior of Chalcopyrite by a Mixed Culture at Low Temperature. Front Microbiol 2021; 12:663757. [PMID: 34040597 PMCID: PMC8141852 DOI: 10.3389/fmicb.2021.663757] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Accepted: 04/14/2021] [Indexed: 11/13/2022] Open
Abstract
Low-temperature biohydrometallurgy is implicated in metal recovery in alpine mining areas, but bioleaching using microbial consortia at temperatures <10°C was scarcely discussed. To this end, a mixed culture was used for chalcopyrite bioleaching at 6°C. The mixed culture resulted in a higher copper leaching rate than the pure culture of Acidithiobacillus ferrivorans strain YL15. High-throughput sequencing technology showed that Acidithiobacillus spp. and Sulfobacillus spp. were the mixed culture's major lineages. Cyclic voltammograms, potentiodynamic polarization and electrochemical impedance spectroscopy unveiled that the mixed culture enhanced the dissolution reactions, decreased the corrosion potential and increased the corrosion current, and lowered the charge transfer resistance and passivation layer impedance of the chalcopyrite electrode compared with the pure culture. This study revealed the mechanisms via which the mixed culture promoted the chalcopyrite bioleaching.
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Affiliation(s)
- Tangjian Peng
- School of Minerals Processing and Bioengineering, Central South University, Changsha, China
- Key Laboratory of Biometallurgy, Ministry of Education, Changsha, China
| | - Wanqing Liao
- School of Minerals Processing and Bioengineering, Central South University, Changsha, China
| | - Jingshu Wang
- School of Minerals Processing and Bioengineering, Central South University, Changsha, China
| | - Jie Miao
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China
| | - Yuping Peng
- School of Minerals Processing and Bioengineering, Central South University, Changsha, China
| | - Guohua Gu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, China
- Key Laboratory of Biometallurgy, Ministry of Education, Changsha, China
| | - Xueling Wu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, China
- Key Laboratory of Biometallurgy, Ministry of Education, Changsha, China
| | - Guanzhou Qiu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, China
- Key Laboratory of Biometallurgy, Ministry of Education, Changsha, China
| | - Weimin Zeng
- School of Minerals Processing and Bioengineering, Central South University, Changsha, China
- Key Laboratory of Biometallurgy, Ministry of Education, Changsha, China
- CSIRO Process Science and Engineering, Clayton, VIC, Australia
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Zhao D, Yang J, Liu T, Lu D, Zhang S, Yan L, Ni Y. Complete Genome Sequence Analysis of Acidithiobacillus ferrivorans XJFY6S-08 Reveals Environmental Adaptation to Alpine Acid Mine Drainage. Curr Microbiol 2021; 78:1488-1498. [PMID: 33660044 DOI: 10.1007/s00284-021-02423-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 02/10/2021] [Indexed: 02/02/2023]
Abstract
The present work reported the complete genome sequence analysis of Acidithiobacillus ferrivorans strain XJFY6S-08 isolated from acid mine drainage in Fuyun copper mine in Xinjiang, China, revealing the potential for extreme environmental adaptation. The strain XJFY6S-08 possesses 3,161,380 bp in length and 56.55% GC content. Genomic analysis revealed that this strain harbors metal-tolerant genes coding for the mer operon, arsRBC operon and a variety of metal assimilation and efflux proteins. Genes coding for K+/H+ transporting ATPase and the Na+/H+ antiporter gene nhaA for pH adaptation were identified. The presence of genes associated with various DNA repair enzymes and the synthesis of mycosporine-like amino acids precursor support the UVR resistance mechanisms. The genes related to membrane modifications (ppiBCD, slyD, surA, cfa and fabF) and resistance-nodulation-division (RND) family can play a crucial role in organic solvents tolerance. The strain XJFY6S-08 resists low-temperature conditions by a set of mechanisms such as changes of RNA metabolism, transmembrane transport, compatible solutes and transport, biofilm and EPS formation, chemotaxis and motility and ROS scavenging. These findings can provide important information for further studying the comparative genome and environmental adaptation mechanism of A. ferrivorans.
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Affiliation(s)
- Dan Zhao
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Argo-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, 163319, People's Republic of China
| | - Jian Yang
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Argo-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, 163319, People's Republic of China
| | - Tao Liu
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Argo-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, 163319, People's Republic of China
| | - Dong Lu
- Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, 730000, People's Republic of China
| | - Shuang Zhang
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Argo-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, 163319, People's Republic of China
| | - Lei Yan
- Heilongjiang Provincial Key Laboratory of Environmental Microbiology and Recycling of Argo-Waste in Cold Region, College of Life Science and Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, 163319, People's Republic of China.
| | - Yongqing Ni
- School of Food Science, Shihezi University, Shihezi, Xinjiang, 832003, People's Republic of China.
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Sequential Bioleaching of Pyritic Tailings and Ferric Leaching of Nonferrous Slags as a Method for Metal Recovery from Mining and Metallurgical Wastes. MINERALS 2020. [DOI: 10.3390/min10121097] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
In this work, we proposed a method for biohydrometallurgical processing of mining (old pyritic flotation tailings) and metallurgical (slag) wastes to recover gold and other nonferrous metals. Since this processing allows the removal of toxic metals or at least decreases their content in the solids, this approach may reduce the negative environmental impacts of such waste. The proposed process was based on pyritic tailings’ bioleaching to recover metals and produce leach liquor containing a strong oxidizing agent (ferric sulfate) to dissolve nonferrous metal from slag. This approach also allows us to increase concentrations of nonferrous metals in the pregnant leach solution after pyritic waste bioleaching to allow efficient extraction. The old pyritic tailings were previously leached with 0.25% sulfuric acid for 10 min to remove soluble metal sulfates. As a result, 36% of copper and 35% of zinc were extracted. After 12 days of bioleaching with a microbial consortium containing Leptospirillum spp., Sulfobacillus spp., Ferroplasma spp., and Acidithiobacillus spp. at 35 °C, the total recovery of metals from pyritic tailings reached 68% for copper and 77% for zinc; and subsequent cyanidation allowed 92% recovery of gold. Ferric leaching of two types of slag at 70 °C with the leachate obtained during bioleaching of the tailings and containing 15 g/L of Fe3+ allowed 88.9 and 43.4% recovery of copper and zinc, respectively, from copper slag within 150 min. Meanwhile, 91.5% of copper, 84.1% of nickel, and 70.2% of cobalt were extracted from copper–nickel slag within 120 min under the same conditions.
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