1
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Pfaff SA, Wagner ER, Cosgrove DJ. The structure and interaction of polymers affects secondary cell wall banding patterns in Arabidopsis. THE PLANT CELL 2024; 36:4309-4322. [PMID: 39163271 PMCID: PMC11449099 DOI: 10.1093/plcell/koae233] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Revised: 06/21/2024] [Accepted: 08/13/2024] [Indexed: 08/22/2024]
Abstract
Xylem tracheary elements (TEs) synthesize patterned secondary cell walls (SCWs) to reinforce against the negative pressure of water transport. VASCULAR-RELATED NAC-DOMAIN 7 (VND7) induces differentiation, accompanied by cellulose, xylan, and lignin deposition into banded domains. To investigate the effect of polymer biosynthesis mutations on SCW patterning, we developed a method to induce tracheary element transdifferentiation of isolated protoplasts, by transient transformation with VND7. Our data showed that proper xylan elongation is necessary for distinct cellulose bands, cellulose-xylan interactions are essential for coincident polymer patterns, and cellulose deposition is needed to override the intracellular organization that yields unique xylan patterns. These data indicate that a properly assembled cell wall network acts as a scaffold to direct polymer deposition into distinctly banded domains. We describe the transdifferentiation of protoplasts into TEs, providing an avenue to study patterned SCW biosynthesis in a tissue-free environment and in various mutant backgrounds.
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Affiliation(s)
- Sarah A Pfaff
- Intercollege Graduate Degree Program in Plant Biology, The Pennsylvania State University, University Park, PA 16802, USA
- Department of Biology, Pennsylvania State University, University Park, PA 16802, USA
| | - Edward R Wagner
- Department of Biology, Pennsylvania State University, University Park, PA 16802, USA
| | - Daniel J Cosgrove
- Department of Biology, Pennsylvania State University, University Park, PA 16802, USA
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2
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Delmer D, Dixon RA, Keegstra K, Mohnen D. The plant cell wall-dynamic, strong, and adaptable-is a natural shapeshifter. THE PLANT CELL 2024; 36:1257-1311. [PMID: 38301734 PMCID: PMC11062476 DOI: 10.1093/plcell/koad325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Accepted: 12/19/2023] [Indexed: 02/03/2024]
Abstract
Mythology is replete with good and evil shapeshifters, who, by definition, display great adaptability and assume many different forms-with several even turning themselves into trees. Cell walls certainly fit this definition as they can undergo subtle or dramatic changes in structure, assume many shapes, and perform many functions. In this review, we cover the evolution of knowledge of the structures, biosynthesis, and functions of the 5 major cell wall polymer types that range from deceptively simple to fiendishly complex. Along the way, we recognize some of the colorful historical figures who shaped cell wall research over the past 100 years. The shapeshifter analogy emerges more clearly as we examine the evolving proposals for how cell walls are constructed to allow growth while remaining strong, the complex signaling involved in maintaining cell wall integrity and defense against disease, and the ways cell walls adapt as they progress from birth, through growth to maturation, and in the end, often function long after cell death. We predict the next century of progress will include deciphering cell type-specific wall polymers; regulation at all levels of polymer production, crosslinks, and architecture; and how walls respond to developmental and environmental signals to drive plant success in diverse environments.
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Affiliation(s)
- Deborah Delmer
- Section of Plant Biology, University of California Davis, Davis, CA 95616, USA
| | - Richard A Dixon
- BioDiscovery Institute and Department of Biological Sciences, University of North Texas, Denton, TX 76203, USA
| | - Kenneth Keegstra
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48823, USA
| | - Debra Mohnen
- Complex Carbohydrate Research Center and Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, USA
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3
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Rajashekhar M, Rajashekar B, Reddy TP, Manikyanahalli Chandrashekara K, Vanisree K, Ramakrishna K, Sunitha V, Shaila O, Sathyanarayana E, Shahanaz, Reddy SS, Shankar A, Jahan A, Kumar PV, Reddy MJM. Evaluation of farmers friendly IPM modules for the management of fall armyworm, Spodoptera frugiperda (JE Smith) in maize in the hot semiarid region of India. Sci Rep 2024; 14:7118. [PMID: 38532112 DOI: 10.1038/s41598-024-57860-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2023] [Accepted: 03/22/2024] [Indexed: 03/28/2024] Open
Abstract
Invasive alien species (IAS) pose a severe threat to global agriculture, with their impact projected to escalate due to climate change and expanding international trade. The fall armyworm (FAW), Spodoptera frugiperda (J. E. Smith), a native of the Americas, has rapidly spread across various continents, causing significant damage to several food crops, especially maize. Integrated pest management (IPM) programs are vital for sustainable FAW control, combining multiple strategies for sustainable results. Over three consecutive years, 2019-20, 2020-21 and 2021-22, the field demonstrations were conducted in semiarid regions of India, testing a four-component IPM approach viz., pheromone traps, microbial, botanicals and ETL based applications of insecticides against farmers' practices (sole insecticide application). IPM implementation led to substantial reductions in FAW infestation. Furthermore, egg mass and larvae infestations were significantly lower in IPM-adopted villages compared to conventional practices. Pheromone-based monitoring demonstrated a consistent reduction in adult moth populations. The lowest technology gap (10.42), extension gap (8.33) and technology index (12.25) was recorded during 2020-21. The adoption of IPM led to increased maize yields (17.49, 12.62 and 24.87% over control), higher net returns (919, 906.20 and 992.93 USD), and favourable benefit-cost ratios (2.74, 2.39 and 2.33) compared to conventional practices respectively during 2019-20, 2020-21 and 2021-22. The economic viability of IPM strategies was evident across three consecutive years, confirming their potential for sustainable FAW management in the semiarid region of India. These strategies hold promise for adoption in other parts of the world sharing similar climatic conditions.
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Affiliation(s)
- Mandla Rajashekhar
- Entomology Department, Institute of Biotechnology, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India.
| | - Banda Rajashekar
- Krishi Vigyan Kendra, Palem, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | - Thalla Prabhakar Reddy
- Krishi Vigyan Kendra, Palem, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | | | - Kalisetti Vanisree
- Maize Research Centre, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | - Kommagoni Ramakrishna
- Krishi Vigyan Kendra, Palem, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | - Vanam Sunitha
- All India Network Project On Vertebrate Pest Management, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | - Ongolu Shaila
- Krishi Vigyan Kendra, Palem, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | - Eetela Sathyanarayana
- Department of Soil Science and Agricultural Chemistry, Agricultural College, Palem, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | - Shahanaz
- College of Horticulture, Mojerla, Sri Konda Laxman Telangana State Horticultural University, Rajendranagar, Hyderabad, India
| | - Somireddy Srinivasa Reddy
- Seed Research Technology Centre, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | - Adhi Shankar
- Krishi Vigyan Kendra, Palem, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | - Afifa Jahan
- Krishi Vigyan Kendra, Palem, Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
| | - Padala Vinod Kumar
- ICAR- RCER, Research Centre for Makhana, Darbhanga, Bihar, 846005, India
| | - Maligi Jagan Mohan Reddy
- Extension Education Institute (Southern Region), Professor Jayashankar Telangana State Agricultural University (PJTSAU), Hyderabad, Telangana, India
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Benalaya I, Alves G, Lopes J, Silva LR. A Review of Natural Polysaccharides: Sources, Characteristics, Properties, Food, and Pharmaceutical Applications. Int J Mol Sci 2024; 25:1322. [PMID: 38279323 PMCID: PMC10816883 DOI: 10.3390/ijms25021322] [Citation(s) in RCA: 36] [Impact Index Per Article: 36.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Revised: 01/08/2024] [Accepted: 01/14/2024] [Indexed: 01/28/2024] Open
Abstract
Natural polysaccharides, which are described in this study, are some of the most extensively used biopolymers in food, pharmaceutical, and medical applications, because they are renewable and have a high level of biocompatibility and biodegradability. The fundamental understanding required to properly exploit polysaccharides potential in the biocomposite, nanoconjugate, and pharmaceutical industries depends on detailed research of these molecules. Polysaccharides are preferred over other polymers because of their biocompatibility, bioactivity, homogeneity, and bioadhesive properties. Natural polysaccharides have also been discovered to have excellent rheological and biomucoadhesive properties, which may be used to design and create a variety of useful and cost-effective drug delivery systems. Polysaccharide-based composites derived from natural sources have been widely exploited due to their multifunctional properties, particularly in drug delivery systems and biomedical applications. These materials have achieved global attention and are in great demand because to their biochemical properties, which mimic both human and animal cells. Although synthetic polymers account for a substantial amount of organic chemistry, natural polymers play a vital role in a range of industries, including biomedical, pharmaceutical, and construction. As a consequence, the current study will provide information on natural polymers, their biological uses, and food and pharmaceutical applications.
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Affiliation(s)
- Ikbel Benalaya
- CICS-UBI—Health Sciences Research Centre, University of Beira Interior, 6201-001 Covilha, Portugal; (I.B.); (G.A.)
| | - Gilberto Alves
- CICS-UBI—Health Sciences Research Centre, University of Beira Interior, 6201-001 Covilha, Portugal; (I.B.); (G.A.)
| | - João Lopes
- iMed.ULisboa, Research Institute for Medicines, Faculdade de Farmácia, University of Lisboa, 1649-003 Lisbon, Portugal
| | - Luís R. Silva
- CICS-UBI—Health Sciences Research Centre, University of Beira Interior, 6201-001 Covilha, Portugal; (I.B.); (G.A.)
- CPIRN-UDI/IPG, Center of Potential and Innovation of Natural Resources, Research Unit for Inland Development (UDI), Polytechnic Institute of Guarda, 6300-559 Guarda, Portugal
- CIEPQPF, Department of Chemical Engineering, Pólo II—Pinhal de Marrocos, University of Coimbra, 3030-790 Coimbra, Portugal
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Smithers ET, Luo J, Dyson RJ. A continuum mechanics model of the plant cell wall reveals interplay between enzyme action and cell wall structure. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2024; 47:1. [PMID: 38183519 PMCID: PMC10771620 DOI: 10.1140/epje/s10189-023-00396-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Accepted: 12/11/2023] [Indexed: 01/08/2024]
Abstract
Plant cell growth is regulated through manipulation of the cell wall network, which consists of oriented cellulose microfibrils embedded within a ground matrix incorporating pectin and hemicellulose components. There remain many unknowns as to how this manipulation occurs. Experiments have shown that cellulose reorients in cell walls as the cell expands, while recent data suggest that growth is controlled by distinct collections of hemicellulose called biomechanical hotspots, which join the cellulose molecule together. The enzymes expansin and Cel12A have both been shown to induce growth of the cell wall; however, while Cel12A's wall-loosening action leads to a reduction in the cell wall strength, expansin's has been shown to increase the strength of the cell wall. In contrast, members of the XTH enzyme family hydrolyse hemicellulose but do not appear to cause wall creep. This experimentally observed behaviour still awaits a full explanation. We derive and analyse a mathematical model for the effective mechanical properties of the evolving cell wall network, incorporating cellulose microfibrils, which reorient with cell growth and are linked via biomechanical hotspots made up of regions of crosslinking hemicellulose. Assuming a visco-elastic response for the cell wall and using a continuum approach, we calculate the total stress resultant of the cell wall for a given overall growth rate. By changing appropriate parameters affecting breakage rate and viscous properties, we provide evidence for the biomechanical hotspot hypothesis and develop mechanistic understanding of the growth-inducing enzymes.
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Affiliation(s)
- Euan T Smithers
- School of Mathematics, University of Birmingham, Birmingham, B15 2TT, UK.
- Sainsbury Laboratory, University of Cambridge, Bateman street, Cambridge, CB2 1LR, Cambridgeshire, UK.
| | - Jingxi Luo
- School of Mathematics, University of Birmingham, Birmingham, B15 2TT, UK
| | - Rosemary J Dyson
- School of Mathematics, University of Birmingham, Birmingham, B15 2TT, UK
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6
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Zhang N, Julian JD, Yap CE, Swaminathan S, Zabotina OA. The Arabidopsis xylosyltransferases, XXT3, XXT4, and XXT5, are essential to complete the fully xylosylated glucan backbone XXXG-type structure of xyloglucans. THE NEW PHYTOLOGIST 2023; 238:1986-1999. [PMID: 36856333 DOI: 10.1111/nph.18851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2022] [Accepted: 02/18/2023] [Indexed: 05/04/2023]
Abstract
Although most xyloglucans (XyGs) biosynthesis enzymes have been identified, the molecular mechanism that defines XyG branching patterns is unclear. Four out of five XyG xylosyltransferases (XXT1, XXT2, XXT4, and XXT5) are known to add the xylosyl residue from UDP-xylose onto a glucan backbone chain; however, the function of XXT3 has yet to be demonstrated. Single xxt3 and triple xxt3xxt4xxt5 mutant Arabidopsis (Arabidopsis thaliana) plants were generated using CRISPR-Cas9 technology to determine the specific function of XXT3. Combined biochemical, bioinformatic, and morphological data conclusively established for the first time that XXT3, together with XXT4 and XXT5, adds xylosyl residue specifically at the third glucose in the glucan chain to synthesize XXXG-type XyGs. We propose that the specificity of XXT3, XXT4, and XXT5 is directed toward the prior synthesis of the acceptor substrate by the other two enzymes, XXT1 and XXT2. We also conclude that XXT5 plays a dominant role in the synthesis of XXXG-type XyGs, while XXT3 and XXT4 complementarily contribute their activities in a tissue-specific manner. The newly generated xxt3xxt4xxt5 mutant produces only XXGG-type XyGs, which further helps to understand the impact of structurally deficient polysaccharides on plant cell wall organization, growth, and development.
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Affiliation(s)
- Ning Zhang
- Roy J Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA, 50011, USA
| | - Jordan D Julian
- Roy J Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA, 50011, USA
| | - Cheng Ern Yap
- Roy J Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA, 50011, USA
| | - Sivakumar Swaminathan
- Roy J Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA, 50011, USA
| | - Olga A Zabotina
- Roy J Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA, 50011, USA
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7
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Cellulose in Secondary Xylem of Cactaceae: Crystalline Composition and Anatomical Distribution. Polymers (Basel) 2022; 14:polym14224840. [PMID: 36432966 PMCID: PMC9695511 DOI: 10.3390/polym14224840] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Revised: 11/06/2022] [Accepted: 11/08/2022] [Indexed: 11/12/2022] Open
Abstract
Cellulose is the main polymer that gives strength to the cell wall and is located in the primary and secondary cell walls of plants. In Cactaceae, there are no studies on the composition of cellulose. The objective of this work was to analyze the crystallinity composition and anatomical distribution of cellulose in Cactaceae vascular tissue. Twenty-five species of Cactaceae were collected, dried, and milled. Cellulose was purified and analyzed with Fourier transform infrared spectroscopy, the crystallinity indexes were calculated, and statistical analyzes were performed. Stem sections were fixed, cut, and stained with safranin O/fast green, for observation with epifluorescence microscopy. The crystalline cellulose ratios had statistical differences between Echinocereus pectinatus and Coryphantha pallida. All cacti species presented a higher proportion of crystalline cellulose. The fluorescence emission of the cellulose was red in color and distributed in the primary wall of non-fibrous species; while in the fibrous species, the distribution was in the pits. The high percentages of crystalline cellulose may be related to its distribution in the non-lignified parenchyma and primary walls of tracheary elements with helical or annular thickenings of non-fibrous species, possibly offering structural rigidity and forming part of the defense system against pathogens.
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8
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Cosgrove DJ. Building an extensible cell wall. PLANT PHYSIOLOGY 2022; 189:1246-1277. [PMID: 35460252 PMCID: PMC9237729 DOI: 10.1093/plphys/kiac184] [Citation(s) in RCA: 92] [Impact Index Per Article: 30.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Accepted: 03/21/2022] [Indexed: 05/15/2023]
Abstract
This article recounts, from my perspective of four decades in this field, evolving paradigms of primary cell wall structure and the mechanism of surface enlargement of growing cell walls. Updates of the structures, physical interactions, and roles of cellulose, xyloglucan, and pectins are presented. This leads to an example of how a conceptual depiction of wall structure can be translated into an explicit quantitative model based on molecular dynamics methods. Comparison of the model's mechanical behavior with experimental results provides insights into the molecular basis of complex mechanical behaviors of primary cell wall and uncovers the dominant role of cellulose-cellulose interactions in forming a strong yet extensible network.
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Affiliation(s)
- Daniel J Cosgrove
- Department of Biology, Penn State University, Pennsylvania 16802, USA
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9
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Ishida K, Yokoyama R. Reconsidering the function of the xyloglucan endotransglucosylase/hydrolase family. JOURNAL OF PLANT RESEARCH 2022; 135:145-156. [PMID: 35000024 DOI: 10.1007/s10265-021-01361-w] [Citation(s) in RCA: 39] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Accepted: 11/21/2021] [Indexed: 05/21/2023]
Abstract
Plants possess an outer cell layer called the cell wall. This matrix comprises various molecules, such as polysaccharides and proteins, and serves a wide array of physiologically important functions. This structure is not static but rather flexible in response to the environment. One of the factors responsible for this plasticity is the xyloglucan endotransglucosylase/hydrolase (XTH) family, which cleaves and reconnects xyloglucan molecules. Since xyloglucan molecules have been hypothesised to tether cellulose microfibrils forming the main load-bearing network in the primary cell wall, XTHs have been thought to play a central role in cell wall loosening for plant cell expansion. However, multiple lines of recent evidence have questioned this classic model. Nevertheless, reverse genetic analyses have proven the biological importance of XTHs; therefore, a major challenge at present is to reconsider the role of XTHs in planta. Recent advances in analytical techniques have allowed for gathering rich information on the structure of the primary cell wall. Thus, the integration of accumulated knowledge in current XTH studies may offer a turning point for unveiling the precise functions of XTHs. In the present review, we redefine the biological function of the XTH family based on the recent architectural model of the cell wall. We highlight three key findings regarding this enzyme family: (1) XTHs are not strictly required for cell wall loosening during plant cell expansion but play vital roles in response to specific biotic or abiotic stresses; (2) in addition to their transglycosylase activity, the hydrolase activity of XTHs is involved in physiological benefits; and (3) XTHs can recognise a wide range of polysaccharides other than xyloglucans.
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Affiliation(s)
- Konan Ishida
- Department of Biochemistry, University of Cambridge, Cambridge, CB2 1QE, UK
| | - Ryusuke Yokoyama
- Graduate School of Life Sciences, Tohoku University, Sendai, 980-8578, Japan.
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10
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Hrmova M, Stratilová B, Stratilová E. Broad Specific Xyloglucan:Xyloglucosyl Transferases Are Formidable Players in the Re-Modelling of Plant Cell Wall Structures. Int J Mol Sci 2022; 23:ijms23031656. [PMID: 35163576 PMCID: PMC8836008 DOI: 10.3390/ijms23031656] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2022] [Revised: 01/25/2022] [Accepted: 01/26/2022] [Indexed: 01/27/2023] Open
Abstract
Plant xyloglucan:xyloglucosyl transferases, known as xyloglucan endo-transglycosylases (XETs) are the key players that underlie plant cell wall dynamics and mechanics. These fundamental roles are central for the assembly and modifications of cell walls during embryogenesis, vegetative and reproductive growth, and adaptations to living environments under biotic and abiotic (environmental) stresses. XET enzymes (EC 2.4.1.207) have the β-sandwich architecture and the β-jelly-roll topology, and are classified in the glycoside hydrolase family 16 based on their evolutionary history. XET enzymes catalyse transglycosylation reactions with xyloglucan (XG)-derived and other than XG-derived donors and acceptors, and this poly-specificity originates from the structural plasticity and evolutionary diversification that has evolved through expansion and duplication. In phyletic groups, XETs form the gene families that are differentially expressed in organs and tissues in time- and space-dependent manners, and in response to environmental conditions. Here, we examine higher plant XET enzymes and dissect how their exclusively carbohydrate-linked transglycosylation catalytic function inter-connects complex plant cell wall components. Further, we discuss progress in technologies that advance the knowledge of plant cell walls and how this knowledge defines the roles of XETs. We construe that the broad specificity of the plant XETs underscores their roles in continuous cell wall restructuring and re-modelling.
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Affiliation(s)
- Maria Hrmova
- Jiangsu Collaborative Innovation Centre for Regional Modern Agriculture and Environmental Protection, School of Life Science, Huaiyin Normal University, Huai’an 223300, China
- School of Agriculture, Food and Wine & Waite Research Institute, University of Adelaide, Glen Osmond, SA 5064, Australia
- Correspondence: ; Tel.: +61-8-8313-0775
| | - Barbora Stratilová
- Institute of Chemistry, Centre for Glycomics, Slovak Academy of Sciences, SK-84538 Bratislava, Slovakia; (B.S.); (E.S.)
- Faculty of Natural Sciences, Department of Physical and Theoretical Chemistry, Comenius University, SK-84215 Bratislava, Slovakia
| | - Eva Stratilová
- Institute of Chemistry, Centre for Glycomics, Slovak Academy of Sciences, SK-84538 Bratislava, Slovakia; (B.S.); (E.S.)
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11
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Codjoe JM, Miller K, Haswell ES. Plant cell mechanobiology: Greater than the sum of its parts. THE PLANT CELL 2022; 34:129-145. [PMID: 34524447 PMCID: PMC8773992 DOI: 10.1093/plcell/koab230] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Accepted: 09/09/2021] [Indexed: 05/04/2023]
Abstract
The ability to sense and respond to physical forces is critical for the proper function of cells, tissues, and organisms across the evolutionary tree. Plants sense gravity, osmotic conditions, pathogen invasion, wind, and the presence of barriers in the soil, and dynamically integrate internal and external stimuli during every stage of growth and development. While the field of plant mechanobiology is growing, much is still poorly understood-including the interplay between mechanical and biochemical information at the single-cell level. In this review, we provide an overview of the mechanical properties of three main components of the plant cell and the mechanoperceptive pathways that link them, with an emphasis on areas of complexity and interaction. We discuss the concept of mechanical homeostasis, or "mechanostasis," and examine the ways in which cellular structures and pathways serve to maintain it. We argue that viewing mechanics and mechanotransduction as emergent properties of the plant cell can be a useful conceptual framework for synthesizing current knowledge and driving future research.
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Affiliation(s)
- Jennette M Codjoe
- Department of Biology and Center for Engineering Mechanobiology, Washington University in St Louis, St Louis, Missouri, 63130, USA
| | - Kari Miller
- Department of Biology and Center for Engineering Mechanobiology, Washington University in St Louis, St Louis, Missouri, 63130, USA
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12
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Ehrlich JJ, Weerts RM, Shome S, Culbertson AT, Honzatko RB, Jernigan RL, Zabotina OA. Xyloglucan Xylosyltransferase 1 Displays Promiscuity Toward Donor Substrates During in Vitro Reactions. PLANT & CELL PHYSIOLOGY 2021; 62:1890-1901. [PMID: 34265062 DOI: 10.1093/pcp/pcab114] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2021] [Revised: 07/11/2021] [Accepted: 07/14/2021] [Indexed: 05/26/2023]
Abstract
Glycosyltransferases (GTs) are a large family of enzymes that add sugars to a broad range of acceptor substrates, including polysaccharides, proteins and lipids, by utilizing a wide variety of donor substrates in the form of activated sugars. Individual GTs have generally been considered to exhibit a high level of substrate specificity, but this has not been thoroughly investigated across the extremely large set of GTs. Here we investigate xyloglucan xylosyltransferase 1 (XXT1), a GT involved in the synthesis of the plant cell wall polysaccharide, xyloglucan. Xyloglucan has a glucan backbone, with initial side chain substitutions exclusively composed of xylose from uridine diphosphate (UDP)-xylose. While this conserved substitution pattern suggests a high substrate specificity for XXT1, our in vitro kinetic studies elucidate a more complex set of behavior. Kinetic studies demonstrate comparable kcat values for reactions with UDP-xylose and UDP-glucose, while reactions with UDP-arabinose and UDP-galactose are over 10-fold slower. Using kcat/KM as a measure of efficiency, UDP-xylose is 8-fold more efficient as a substrate than the next best alternative, UDP-glucose. To the best of our knowledge, we are the first to demonstrate that not all plant XXTs are highly substrate specific and some do show significant promiscuity in their in vitro reactions. Kinetic parameters alone likely do not explain the high substrate selectivity in planta, suggesting that there are additional control mechanisms operating during polysaccharide biosynthesis. Improved understanding of substrate specificity of the GTs will aid in protein engineering, development of diagnostic tools, and understanding of biological systems.
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Affiliation(s)
- Jacqueline J Ehrlich
- Roy J Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, 1210 Molecular Biology Building, 2437 Pammel Drive, Ames IA 50011-1079, USA
- Department of Molecular Biology & Genetics, 107 Biotechnology Building, 526 Campus Road, Cornell University, Ithaca, NY 14853-2703, USA
| | - Richard M Weerts
- Roy J Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, 1210 Molecular Biology Building, 2437 Pammel Drive, Ames IA 50011-1079, USA
| | - Sayane Shome
- Roy J Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, 1210 Molecular Biology Building, 2437 Pammel Drive, Ames IA 50011-1079, USA
| | - Alan T Culbertson
- Roy J Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, 1210 Molecular Biology Building, 2437 Pammel Drive, Ames IA 50011-1079, USA
- Department of Cell Biology, Harvard Medical School, 240 Longwood Ave., Boston, MA 02115, USA
| | - Richard B Honzatko
- Roy J Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, 1210 Molecular Biology Building, 2437 Pammel Drive, Ames IA 50011-1079, USA
| | - Robert L Jernigan
- Roy J Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, 1210 Molecular Biology Building, 2437 Pammel Drive, Ames IA 50011-1079, USA
| | - Olga A Zabotina
- Roy J Carver Department of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, 1210 Molecular Biology Building, 2437 Pammel Drive, Ames IA 50011-1079, USA
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13
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Fittolani G, Tyrikos-Ergas T, Vargová D, Chaube MA, Delbianco M. Progress and challenges in the synthesis of sequence controlled polysaccharides. Beilstein J Org Chem 2021; 17:1981-2025. [PMID: 34386106 PMCID: PMC8353590 DOI: 10.3762/bjoc.17.129] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Accepted: 07/22/2021] [Indexed: 01/15/2023] Open
Abstract
The sequence, length and substitution of a polysaccharide influence its physical and biological properties. Thus, sequence controlled polysaccharides are important targets to establish structure-properties correlations. Polymerization techniques and enzymatic methods have been optimized to obtain samples with well-defined substitution patterns and narrow molecular weight distribution. Chemical synthesis has granted access to polysaccharides with full control over the length. Here, we review the progress towards the synthesis of well-defined polysaccharides. For each class of polysaccharides, we discuss the available synthetic approaches and their current limitations.
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Affiliation(s)
- Giulio Fittolani
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
- Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Theodore Tyrikos-Ergas
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
- Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Denisa Vargová
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Manishkumar A Chaube
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Martina Delbianco
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
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14
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Zhang W, Qin W, Li H, Wu AM. Biosynthesis and Transport of Nucleotide Sugars for Plant Hemicellulose. FRONTIERS IN PLANT SCIENCE 2021; 12:723128. [PMID: 34868108 PMCID: PMC8636097 DOI: 10.3389/fpls.2021.723128] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Accepted: 10/22/2021] [Indexed: 05/13/2023]
Abstract
Hemicellulose is entangled with cellulose through hydrogen bonds and meanwhile acts as a bridge for the deposition of lignin monomer in the secondary wall. Therefore, hemicellulose plays a vital role in the utilization of cell wall biomass. Many advances in hemicellulose research have recently been made, and a large number of genes and their functions have been identified and verified. However, due to the diversity and complexity of hemicellulose, the biosynthesis and regulatory mechanisms are yet unknown. In this review, we summarized the types of plant hemicellulose, hemicellulose-specific nucleotide sugar substrates, key transporters, and biosynthesis pathways. This review will contribute to a better understanding of substrate-level regulation of hemicellulose synthesis.
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Affiliation(s)
- Wenjuan Zhang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou, China
- Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architectures, South China Agricultural University, Guangzhou, China
| | - Wenqi Qin
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou, China
- Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architectures, South China Agricultural University, Guangzhou, China
| | - Huiling Li
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou, China
- Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architectures, South China Agricultural University, Guangzhou, China
| | - Ai-min Wu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou, China
- Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architectures, South China Agricultural University, Guangzhou, China
- Guangdong Laboratory of Lingnan Modern Agriculture, Guangzhou, China
- *Correspondence: Ai-min Wu,
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15
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Escherichia coli O157:H7 F9 Fimbriae Recognize Plant Xyloglucan and Elicit a Response in Arabidopsis thaliana. Int J Mol Sci 2020; 21:ijms21249720. [PMID: 33352760 PMCID: PMC7766294 DOI: 10.3390/ijms21249720] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Revised: 12/04/2020] [Accepted: 12/14/2020] [Indexed: 11/16/2022] Open
Abstract
Fresh produce is often a source of enterohaemorrhagic Escherichia coli (EHEC) outbreaks. Fimbriae are extracellular structures involved in cell-to-cell attachment and surface colonisation. F9 (Fml) fimbriae have been shown to be expressed at temperatures lower than 37 °C, implying a function beyond the mammalian host. We demonstrate that F9 fimbriae recognize plant cell wall hemicellulose, specifically galactosylated side chains of xyloglucan, using glycan arrays. E. coli expressing F9 fimbriae had a positive advantage for adherence to spinach hemicellulose extract and tissues, which have galactosylated oligosaccharides as recognized by LM24 and LM25 antibodies. As fimbriae are multimeric structures with a molecular pattern, we investigated whether F9 fimbriae could induce a transcriptional response in model plant Arabidopsis thaliana, compared with flagella and another fimbrial type, E. coli common pilus (ECP), using DNA microarrays. F9 induced the differential expression of 435 genes, including genes involved in the plant defence response. The expression of F9 at environmentally relevant temperatures and its recognition of plant xyloglucan adds to the suite of adhesins EHEC has available to exploit the plant niche.
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16
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Stratilová B, Kozmon S, Stratilová E, Hrmova M. Plant Xyloglucan Xyloglucosyl Transferases and the Cell Wall Structure: Subtle but Significant. Molecules 2020; 25:E5619. [PMID: 33260399 PMCID: PMC7729885 DOI: 10.3390/molecules25235619] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2020] [Revised: 11/25/2020] [Accepted: 11/26/2020] [Indexed: 12/16/2022] Open
Abstract
Plant xyloglucan xyloglucosyl transferases or xyloglucan endo-transglycosylases (XET; EC 2.4.1.207) catalogued in the glycoside hydrolase family 16 constitute cell wall-modifying enzymes that play a fundamental role in the cell wall expansion and re-modelling. Over the past thirty years, it has been established that XET enzymes catalyse homo-transglycosylation reactions with xyloglucan (XG)-derived substrates and hetero-transglycosylation reactions with neutral and charged donor and acceptor substrates other than XG-derived. This broad specificity in XET isoforms is credited to a high degree of structural and catalytic plasticity that has evolved ubiquitously in algal, moss, fern, basic Angiosperm, monocot, and eudicot enzymes. These XET isoforms constitute gene families that are differentially expressed in tissues in time- and space-dependent manners during plant growth and development, and in response to biotic and abiotic stresses. Here, we discuss the current state of knowledge of broad specific plant XET enzymes and how their inherently carbohydrate-based transglycosylation reactions tightly link with structural diversity that underlies the complexity of plant cell walls and their mechanics. Based on this knowledge, we conclude that multi- or poly-specific XET enzymes are widespread in plants to allow for modifications of the cell wall structure in muro, a feature that implements the multifaceted roles in plant cells.
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Affiliation(s)
- Barbora Stratilová
- Institute of Chemistry, Centre for Glycomics, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84538 Bratislava, Slovakia; (B.S.); (S.K.); (E.S.)
- Faculty of Natural Sciences, Department of Physical and Theoretical Chemistry, Comenius University, Mlynská Dolina, SK-84215 Bratislava, Slovakia
| | - Stanislav Kozmon
- Institute of Chemistry, Centre for Glycomics, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84538 Bratislava, Slovakia; (B.S.); (S.K.); (E.S.)
| | - Eva Stratilová
- Institute of Chemistry, Centre for Glycomics, Slovak Academy of Sciences, Dúbravská cesta 9, SK-84538 Bratislava, Slovakia; (B.S.); (S.K.); (E.S.)
| | - Maria Hrmova
- School of Life Science, Huaiyin Normal University, Huai’an 223300, China
- School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA 5064, Australia
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17
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Yokoyama R. A Genomic Perspective on the Evolutionary Diversity of the Plant Cell Wall. PLANTS (BASEL, SWITZERLAND) 2020; 9:E1195. [PMID: 32932717 PMCID: PMC7570368 DOI: 10.3390/plants9091195] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Revised: 09/02/2020] [Accepted: 09/11/2020] [Indexed: 01/02/2023]
Abstract
The plant cell wall is a complex and dynamic structure composed of numerous different molecules that play multiple roles in all aspects of plant life. Currently, a new frontier in biotechnology is opening up, which is providing new insights into the structural and functional diversity of cell walls, and is thus serving to re-emphasize the significance of cell wall divergence in the evolutionary history of plant species. The ever-increasing availability of plant genome datasets will thus provide an invaluable basis for enhancing our knowledge regarding the diversity of cell walls among different plant species. In this review, as an example of a comparative genomics approach, I examine the diverse patterns of cell wall gene families among 100 species of green plants, and illustrate the evident benefits of using genome databases for studying cell wall divergence. Given that the growth and development of all types of plant cells are intimately associated with cell wall dynamics, gaining a further understanding of the functional diversity of cell walls in relation to diverse biological events will make significant contributions to a broad range of plant sciences.
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Affiliation(s)
- Ryusuke Yokoyama
- Graduate School of Life Sciences, Tohoku University, Sendai 980-8578, Japan
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