Using Hyperspectral Crop Residue Angle Index to Estimate Maize and Winter-Wheat Residue Cover: A Laboratory Study

A 30-m annual corn residue coverage dataset from 2013 to 2021 in Northeast China

Crop residue cover plays a key role in the protection of black soil by covering the soil in the non-growing season against wind erosion and chopping for returning to the soil to increase organic matter in the future. Although there are some studies that have mapped the crop residue coverage by remote sensing technique, the results are mainly on a small scale, limiting the generalizability of the results. In this study, we present a novel corn residue coverage (CRC) dataset for Northeast China spanning the years 2013-2021. The aim of our dataset is to provide a basis to describe and monitor CRC for black soil protection. The accuracy of our estimation results was validated against previous studies and measured data, demonstrating high accuracy with a coefficient of determination (R2) of 0.7304 and root mean square error (RMSE) of 0.1247 between estimated and measured CRC in field campaigns. In addition, it is the first of its kind to offer the longest time series, enhancing its significance in long-term monitoring and analysis.

Evaluation of SWIR Crop Residue Bands for the Landsat Next Mission

This research reports the findings of a Landsat Next expert review panel that evaluated the use of narrow shortwave infrared (SWIR) reflectance bands to measure ligno-cellulose absorption features centered near 2100 and 2300 nm, with the objective of measuring and mapping non-photosynthetic vegetation (NPV), crop residue cover, and the adoption of conservation tillage practices within agricultural landscapes. Results could also apply to detection of NPV in pasture, grazing lands, and non-agricultural settings. Currently, there are no satellite data sources that provide narrowband or hyperspectral SWIR imagery at sufficient volume to map NPV at a regional scale. The Landsat Next mission, currently under design and expected to launch in the late 2020’s, provides the opportunity for achieving increased SWIR sampling and spectral resolution with the adoption of new sensor technology. This study employed hyperspectral data collected from 916 agricultural field locations with varying fractional NPV, fractional green vegetation, and surface moisture contents. These spectra were processed to generate narrow bands with centers at 2040, 2100, 2210, 2260, and 2230 nm, at various bandwidths, that were subsequently used to derive 13 NPV spectral indices from each spectrum. For crop residues with minimal green vegetation cover, two-band indices derived from 2210 and 2260 nm bands were top performers for measuring NPV (R2 = 0.81, RMSE = 0.13) using bandwidths of 30 to 50 nm, and the addition of a third band at 2100 nm increased resistance to atmospheric correction residuals and improved mission continuity with Landsat 8 Operational Land Imager Band 7. For prediction of NPV over a full range of green vegetation cover, the Cellulose Absorption Index, derived from 2040, 2100, and 2210 nm bands, was top performer (R2 = 0.77, RMSE = 0.17), but required a narrow (≤20 nm) bandwidth at 2040 nm to avoid interference from atmospheric carbon dioxide absorption. In comparison, broadband NPV indices utilizing Landsat 8 bands centered at 1610 and 2200 nm performed poorly in measuring fractional NPV (R2 = 0.44), with significantly increased interference from green vegetation.

Corn Residue Covered Area Mapping with a Deep Learning Method Using Chinese GF-1 B/D High Resolution Remote Sensing Images

Black soil is one of the most productive soils with high organic matter content. Crop residue covering is important for protecting black soil from alleviating soil erosion and increasing soil organic carbon. Mapping crop residue covered areas accurately using remote sensing images can monitor the protection of black soil in regional areas. Considering the inhomogeneity and randomness, resulting from human management difference, the high spatial resolution Chinese GF-1 B/D image and developed MSCU-net+C deep learning method are used to mapping corn residue covered area (CRCA) in this study. The developed MSCU-net+C is joined by a multiscale convolution group (MSCG), the global loss function, and Convolutional Block Attention Module (CBAM) based on U-net and the full connected conditional random field (FCCRF). The effectiveness of the proposed MSCU-net+C is validated by the ablation experiment and comparison experiment for mapping CRCA in Lishu County, Jilin Province, China. The accuracy assessment results show that the developed MSCU-net+C improve the CRCA classification accuracy from IOUAVG = 0.8604 and KappaAVG = 0.8864 to IOUAVG = 0.9081 and KappaAVG = 0.9258 compared with U-net. Our developed and other deep semantic segmentation networks (MU-net, GU-net, MSCU-net, SegNet, and Dlv3+) improve the classification accuracy of IOUAVG/KappaAVG with 0.0091/0.0058, 0.0133/0.0091, 0.044/0.0345, 0.0104/0.0069, and 0.0107/0.0072 compared with U-net, respectively. The classification accuracies of IOUAVG/KappaAVG of traditional machine learning methods, including support vector machine (SVM) and neural network (NN), are 0.576/0.5526 and 0.6417/0.6482, respectively. These results reveal that the developed MSCU-net+C can be used to map CRCA for monitoring black soil protection.

From Genome to Field-Observation of the Multimodal Nematicidal and Plant Growth-Promoting Effects of Bacillus firmus I-1582 on Tomatoes Using Hyperspectral Remote Sensing

Root-knot nematodes are considered the most important group of plant-parasitic nematodes due to their wide range of plant hosts and subsequent role in yield losses in agricultural production systems. Chemical nematicides are the primary control method, but ecotoxicity issues with some compounds has led to their phasing-out and consequential development of new control strategies, including biological control. We evaluated the nematicidal activity of Bacillus firmus I-1582 in pot and microplot experiments against Meloidogyne luci. I-1582 reduced nematode counts by 51% and 53% compared to the untreated control in pot and microplot experiments, respectively. I-1582 presence in the rhizosphere had concurrent nematicidal and plant growth-promoting effects, measured using plant morphology, relative chlorophyll content, elemental composition and hyperspectral imaging. Hyperspectral imaging in the 400–2500 nm spectral range and supervised classification using partial least squares support vector machines successfully differentiated B. firmus-treated and untreated plants, with 97.4% and 96.3% accuracy in pot and microplot experiments, respectively. Visible and shortwave infrared spectral regions associated with chlorophyll, N–H and C–N stretches in proteins were most relevant for treatment discrimination. This study shows the ability of hyperspectral imaging to rapidly assess the success of biological measures for pest control.

A Comparison of Estimating Crop Residue Cover from Sentinel-2 Data Using Empirical Regressions and Machine Learning Methods

Quantifying crop residue cover (CRC) on field surfaces is important for monitoring the tillage intensity and promoting sustainable management. Remote-sensing-based techniques have proven practical for determining CRC, however, the methods used are primarily limited to empirical regression based on crop residue indices (CRIs). This study provides a systematic evaluation of empirical regressions and machine learning (ML) algorithms based on their ability to estimate CRC using Sentinel-2 Multispectral Instrument (MSI) data. Unmanned aerial vehicle orthomosaics were used to extracted ground CRC for training Sentinel-2 data-based CRC models. For empirical regression, nine MSI bands, 10 published CRIs, three proposed CRIs, and four mean textural features were evaluated using univariate linear regression. The best performance was obtained by a three-band index calculated using (B2 − B4)/(B2 − B12), with an R2cv of 0.63 and RMSEcv of 6.509%, using a 10-fold cross-validation. The methodologies of partial least squares regression (PLSR), artificial neural network (ANN), Gaussian process regression (GPR), support vector regression (SVR), and random forest (RF) were compared with four groups of predictors, including nine MSI bands, 13 CRIs, a combination of MSI bands and mean textural features, and a combination of CRIs and textural features. In general, ML approaches achieved high accuracy. A PLSR model with 13 CRIs and textural features resulted in an accuracy of R2cv = 0.66 and RMSEcv = 6.427%. An RF model with predictors of MSI bands and textural features estimated CRC with an R2cv = 0.61 and RMSEcv = 6.415%. The estimation was improved by an SVR model with the same input predictors (R2cv = 0.67, RMSEcv = 6.343%), followed by a GPR model based on CRIs and textural features. The performance of GPR models was further improved by optimal input variables. A GPR model with six input variables, three MSI bands and three textural features, performed the best, with R2cv = 0.69 and RMSEcv = 6.149%. This study provides a reference for estimating CRC from Sentinel-2 imagery using ML approaches. The GPR approach is recommended. A combination of spectral information and textural features leads to an improvement in the retrieval of CRC.

Mapping Crop Residue by Combining Landsat and WorldView-3 Satellite Imagery

A unique, multi-tiered approach was applied to map crop-residue cover on the Eastern Shore of the Chesapeake Bay, United States. Field measurements of crop-residue cover were used to calibrate residue mapping using shortwave infrared (SWIR) indices derived from WorldView-3 imagery for a 12-km × 12-km footprint. The resulting map was then used to calibrate and subsequently classify crop residue mapping using Landsat imagery at a larger spatial resolution and extent. This manuscript describes how the method was applied and presents results in the form of crop-residue cover maps, validation statistics, and quantification of conservation tillage implementation in the agricultural landscape. Overall accuracy for maps derived from Landsat 7 and Landsat 8 were comparable at roughly 92% (+/− 10%). Tillage class-specific accuracy was also strong and ranged from 75% to 99%. The approach, which employed a 12-band image stack of six tillage spectral indices and six individual Landsat bands, was shown to be adaptable to variable soil-moisture conditions—under dry conditions (Landsat 7, 14 May 2015) the majority of predictive power was attributed to SWIR indices, and under wet conditions (Landsat 8, 22 May 2015) single band reflectance values were more effective at explaining variability in residue cover. Summary statistics of resulting tillage class occurrence matched closely with conservation tillage implementation totals reported by Maryland and Delaware to the Chesapeake Bay Program. This hybrid method combining WorldView-3 and Landsat imagery sources shows promise for monitoring progress in the adoption of conservation tillage practices and for describing crop-residue outcomes associated with a variety of agricultural management practices.