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Li H, Wan L, Li C, Wang L, Zhu S, Chen X, Wang P. Hyperspectal imaging technology for phenotyping iron and boron deficiency in Brassica napus under greenhouse conditions. FRONTIERS IN PLANT SCIENCE 2024; 15:1351301. [PMID: 38855462 PMCID: PMC11157068 DOI: 10.3389/fpls.2024.1351301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Accepted: 05/10/2024] [Indexed: 06/11/2024]
Abstract
Introduction The micronutrient deficiency of iron and boron is a common issue affecting the growth of rapeseed (Brassica napus). In this study, a non-destructive diagnosis method for iron and boron deficiency in Brassica napus (genotype: Zhongshuang 11) using hyperspectral imaging technology was established. Methods The recognition accuracy was compared using the Fisher Linear Discriminant Analysis (LDA) and Support Vector Machine (SVM) recognition models. Recognition results showed that Multiple Scattering Correction (MSC) could be applied for the full band hyperspectral data processing, while the LDA models presented better performance on establishing the leaf iron and boron deficiency symptom recognition than the SVM models. Results The recognition accuracy of the training set reached 96.67%, and the recognition rate of the prediction set could be 91.67%. To improve the model accuracy, the Competitive Adaptive Reweighted Sampling algorithm (CARS) was added to construct the MSC-CARS-LDA model. 33 featured wavelengths were selected via CARS. The recognition accuracy of the MSC-CARS-LDA training set was 100%, while the recognition accuracy of the MSC-CARS-LDA prediction set was 95.00%. Discussion This study indicates that, it is capable to identify the iron and boron deficiency in rapeseed using hyperspectral imaging technology.
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Affiliation(s)
- Hui Li
- College of Engineering and Technology, Key Laboratory of Agricultural Equipment for Hilly and Mountain Areas, Southwest University, Chongqing, China
- Key Laboratory of Modern Agricultural Equipment and Technology (Jiangsu University), Ministry of Education, School of Agricultural Engineering, Jiangsu University, Zhenjiang, China
| | - Long Wan
- College of Engineering and Technology, Key Laboratory of Agricultural Equipment for Hilly and Mountain Areas, Southwest University, Chongqing, China
| | - Chengsong Li
- College of Engineering and Technology, Key Laboratory of Agricultural Equipment for Hilly and Mountain Areas, Southwest University, Chongqing, China
- National Citrus Engineering Research Center, Chinese Academy of Agricultural Sciences & Southwest University, Chongqing, China
| | - Lihong Wang
- College of Engineering and Technology, Key Laboratory of Agricultural Equipment for Hilly and Mountain Areas, Southwest University, Chongqing, China
| | - Shiping Zhu
- College of Engineering and Technology, Key Laboratory of Agricultural Equipment for Hilly and Mountain Areas, Southwest University, Chongqing, China
| | - Xinping Chen
- Interdisciplinary Research Center for Agriculture Green Development in Yangtze River Basin, College of Resources and Environment, Southwest University, Chongqing, China
| | - Pei Wang
- College of Engineering and Technology, Key Laboratory of Agricultural Equipment for Hilly and Mountain Areas, Southwest University, Chongqing, China
- Key Laboratory of Modern Agricultural Equipment and Technology (Jiangsu University), Ministry of Education, School of Agricultural Engineering, Jiangsu University, Zhenjiang, China
- Institute of Urban Agriculture, Chinese Academy of Agricultural Sciences, Chengdu, China
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2
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Ding G, Shen L, Dai J, Jackson R, Liu S, Ali M, Sun L, Wen M, Xiao J, Deakin G, Jiang D, Wang XE, Zhou J. The Dissection of Nitrogen Response Traits Using Drone Phenotyping and Dynamic Phenotypic Analysis to Explore N Responsiveness and Associated Genetic Loci in Wheat. PLANT PHENOMICS (WASHINGTON, D.C.) 2023; 5:0128. [PMID: 38148766 PMCID: PMC10750832 DOI: 10.34133/plantphenomics.0128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Accepted: 11/23/2023] [Indexed: 12/28/2023]
Abstract
Inefficient nitrogen (N) utilization in agricultural production has led to many negative impacts such as excessive use of N fertilizers, redundant plant growth, greenhouse gases, long-lasting toxicity in ecosystem, and even effect on human health, indicating the importance to optimize N applications in cropping systems. Here, we present a multiseasonal study that focused on measuring phenotypic changes in wheat plants when they were responding to different N treatments under field conditions. Powered by drone-based aerial phenotyping and the AirMeasurer platform, we first quantified 6 N response-related traits as targets using plot-based morphological, spectral, and textural signals collected from 54 winter wheat varieties. Then, we developed dynamic phenotypic analysis using curve fitting to establish profile curves of the traits during the season, which enabled us to compute static phenotypes at key growth stages and dynamic phenotypes (i.e., phenotypic changes) during N response. After that, we combine 12 yield production and N-utilization indices manually measured to produce N efficiency comprehensive scores (NECS), based on which we classified the varieties into 4 N responsiveness (i.e., N-dependent yield increase) groups. The NECS ranking facilitated us to establish a tailored machine learning model for N responsiveness-related varietal classification just using N-response phenotypes with high accuracies. Finally, we employed the Wheat55K SNP Array to map single-nucleotide polymorphisms using N response-related static and dynamic phenotypes, helping us explore genetic components underlying N responsiveness in wheat. In summary, we believe that our work demonstrates valuable advances in N response-related plant research, which could have major implications for improving N sustainability in wheat breeding and production.
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Affiliation(s)
- Guohui Ding
- College of Agriculture, Plant Phenomics Research Centre, Academy for Advanced Interdisciplinary Studies,
Nanjing Agricultural University, Nanjing 210095, China
| | - Liyan Shen
- College of Agriculture, Plant Phenomics Research Centre, Academy for Advanced Interdisciplinary Studies,
Nanjing Agricultural University, Nanjing 210095, China
| | - Jie Dai
- College of Agriculture, Plant Phenomics Research Centre, Academy for Advanced Interdisciplinary Studies,
Nanjing Agricultural University, Nanjing 210095, China
| | - Robert Jackson
- Cambridge Crop Research,
National Institute of Agricultural Botany (NIAB), Cambridge CB3 0LE, UK
| | - Shuchen Liu
- College of Agriculture, Plant Phenomics Research Centre, Academy for Advanced Interdisciplinary Studies,
Nanjing Agricultural University, Nanjing 210095, China
| | - Mujahid Ali
- College of Agriculture, Plant Phenomics Research Centre, Academy for Advanced Interdisciplinary Studies,
Nanjing Agricultural University, Nanjing 210095, China
| | - Li Sun
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute,
Nanjing Agricultural University/JCIC-MCP, Nanjing, Jiangsu 210095, China
| | - Mingxing Wen
- Zhenjiang Institute of Agricultural Science, Jurong, Jiangsu 212400, China
| | - Jin Xiao
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute,
Nanjing Agricultural University/JCIC-MCP, Nanjing, Jiangsu 210095, China
| | - Greg Deakin
- Cambridge Crop Research,
National Institute of Agricultural Botany (NIAB), Cambridge CB3 0LE, UK
| | - Dong Jiang
- Regional Technique Innovation Center for Wheat Production, Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Xiu-e Wang
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Cytogenetics Institute,
Nanjing Agricultural University/JCIC-MCP, Nanjing, Jiangsu 210095, China
| | - Ji Zhou
- College of Agriculture, Plant Phenomics Research Centre, Academy for Advanced Interdisciplinary Studies,
Nanjing Agricultural University, Nanjing 210095, China
- Cambridge Crop Research,
National Institute of Agricultural Botany (NIAB), Cambridge CB3 0LE, UK
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3
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Kant T, Shrivas K, Tejwani A, Tandey K, Sharma A, Gupta S. Progress in the design of portable colorimetric chemical sensing devices. NANOSCALE 2023; 15:19016-19038. [PMID: 37991896 DOI: 10.1039/d3nr03803c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2023]
Abstract
The need for precise determination of heavy metals, anions, biomolecules, pesticides, drugs, and other substances is vital across clinical, environmental, and food safety domains. Recent years have seen significant progress in portable colorimetric chemical sensing devices, revolutionizing on-the-spot analysis. This review offers a comprehensive overview of these advancements, covering handheld colorimetry, RGB-based colorimetry, paper-based colorimetry, and wearable colorimetry devices. It explores the underlying principles, functional materials (chromophoric reagents/dyes and nanoparticles), detection mechanisms, and their applications in environmental monitoring, clinical care, and food safety. Noble metal nanoparticles (NPs) have arisen as promising substitutes in the realm of sensing materials. They display notable advantages, including heightened sensitivity, the ability to fine-tune their plasmonic characteristics for improved selectivity, and the capacity to induce visible color changes, and simplifying detection. Integration of NPs fabricated paper device with smartphones and wearables facilitates reagent-free, cost-effective, and portable colorimetric sensing, enabling real-time analysis and remote monitoring.
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Affiliation(s)
- Tushar Kant
- Shaheed Kawasi Rodda Pedda, Govt. College Kuakonda, Dantewada-494552, CG, India.
| | - Kamlesh Shrivas
- School of Studies in Chemistry, Pt. Ravishankar Shukla University, Raipur-492010, CG, India.
| | - Ankita Tejwani
- School of Studies in Chemistry, Pt. Ravishankar Shukla University, Raipur-492010, CG, India.
| | - Khushali Tandey
- School of Studies in Chemistry, Pt. Ravishankar Shukla University, Raipur-492010, CG, India.
| | - Anuradha Sharma
- Department of Zoology, Govt. Nagarjuna P.G. College of Science, Raipur-492010, CG, India
| | - Shashi Gupta
- Department of Zoology, Govt. Nagarjuna P.G. College of Science, Raipur-492010, CG, India
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4
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Zhang J, Zhang A, Liu Z, He W, Yang S. Multi-index fuzzy comprehensive evaluation model with information entropy of alfalfa salt tolerance based on LiDAR data and hyperspectral image data. FRONTIERS IN PLANT SCIENCE 2023; 14:1200501. [PMID: 37662154 PMCID: PMC10470838 DOI: 10.3389/fpls.2023.1200501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Accepted: 07/18/2023] [Indexed: 09/05/2023]
Abstract
Rapid, non-destructive and automated salt tolerance evaluation is particularly important for screening salt-tolerant germplasm of alfalfa. Traditional evaluation of salt tolerance is mostly based on phenotypic traits obtained by some broken ways, which is time-consuming and difficult to meet the needs of large-scale breeding screening. Therefore, this paper proposed a non-contact and non-destructive multi-index fuzzy comprehensive evaluation model for evaluating the salt tolerance of alfalfa from Light Detection and Ranging data (LiDAR) and HyperSpectral Image data (HSI). Firstly, the structural traits related to growth status were extracted from the LiDAR data of alfalfa, and the spectral traits representing the physical and chemical characteristics were extracted from HSI data. In this paper, these phenotypic traits obtained automatically by computation were called Computing Phenotypic Traits (CPT). Subsequently, the multi-index fuzzy evaluation system of alfalfa salt tolerance was constructed by CPT, and according to the fuzzy mathematics theory, a multi-index Fuzzy Comprehensive Evaluation model with information Entropy of alfalfa salt tolerance (FCE-E) was proposed, which comprehensively evaluated the salt tolerance of alfalfa from the aspects of growth structure, physiology and biochemistry. Finally, comparative experiments showed that: (1) The multi-index FCE-E model based on the CPT was proposed in this paper, which could find more salt-sensitive information than the evaluation method based on the measured Typical Phenotypic Traits (TPT) such as fresh weight, dry weight, water content and chlorophyll. The two evaluation results had 66.67% consistent results, indicating that the multi-index FCE-E model integrates more information about alfalfa and more comprehensive evaluation. (2) On the basis of the CPT, the results of the multi-index FCE-E method were basically consistent with those of Principal Component Analysis (PCA), indicating that the multi-index FCE-E model could accurately evaluate the salt tolerance of alfalfa. Three highly salt-tolerant alfalfa varieties and two highly salt-susceptible alfalfa varieties were screened by the multi-index FCE-E method. The multi-index FCE-E method provides a new method for non-contact non-destructive evaluation of salt tolerance of alfalfa.
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Affiliation(s)
- Jiaxin Zhang
- Key Laboratory of 3D Information Acquisition and Application, Ministry of Education, Capital Normal University, Beijing, China
- Engineering Research Center of Spatial Information Technology, Ministry of Education, Capital Normal University, Beijing, China
- Center for Geographic Environment Research and Education, College of Resource Environment and Tourism, Capital Normal University, Beijing, China
| | - Aiwu Zhang
- Key Laboratory of 3D Information Acquisition and Application, Ministry of Education, Capital Normal University, Beijing, China
- Engineering Research Center of Spatial Information Technology, Ministry of Education, Capital Normal University, Beijing, China
- Center for Geographic Environment Research and Education, College of Resource Environment and Tourism, Capital Normal University, Beijing, China
| | - Zixuan Liu
- Key Laboratory of 3D Information Acquisition and Application, Ministry of Education, Capital Normal University, Beijing, China
- Engineering Research Center of Spatial Information Technology, Ministry of Education, Capital Normal University, Beijing, China
- Center for Geographic Environment Research and Education, College of Resource Environment and Tourism, Capital Normal University, Beijing, China
| | - Wanting He
- Key Laboratory of 3D Information Acquisition and Application, Ministry of Education, Capital Normal University, Beijing, China
- Engineering Research Center of Spatial Information Technology, Ministry of Education, Capital Normal University, Beijing, China
- Center for Geographic Environment Research and Education, College of Resource Environment and Tourism, Capital Normal University, Beijing, China
| | - Shengyuan Yang
- Key Laboratory of 3D Information Acquisition and Application, Ministry of Education, Capital Normal University, Beijing, China
- Engineering Research Center of Spatial Information Technology, Ministry of Education, Capital Normal University, Beijing, China
- Center for Geographic Environment Research and Education, College of Resource Environment and Tourism, Capital Normal University, Beijing, China
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5
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Walker SE, Sheaves M, Waltham NJ. Barriers to Using UAVs in Conservation and Environmental Management: A Systematic Review. ENVIRONMENTAL MANAGEMENT 2023; 71:1052-1064. [PMID: 36525068 DOI: 10.1007/s00267-022-01768-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2022] [Accepted: 12/03/2022] [Indexed: 06/17/2023]
Abstract
The ability to adopt novel tools continues to become more important for governments and environmental managers tasked with balancing economic development, social needs and environmental protection. An example of an emerging technology that can enable flexible, cost-effective data collection for conservation and environmental management is Unmanned Aerial Vehicles (UAVs). It is clear that UAVs are beginning to be adopted for a diversity of purposes, identification of barriers to their use is the first step in increasing their uptake amongst the environmental management community. Identifying the barriers to UAV usage will enable research and management communities to confidently utilise these powerful pieces of technology. However, the implementation of this technology for environmental research has received little overall assessment attention. This systematic literature review has identified 9 barrier categories (namely Technological, Analytical and Processing, Regulatory, Cost, Safety, Social, Wildlife impact, work suitability and others) inhibiting the uptake of UAV technologies. Technological barriers were referenced in the literature most often, with the inability of UAVs to perform in poor weather (such as rain or windy conditions) commonly mentioned. Analytical and Processing and Regulatory barriers were also consistently reported. It is likely that some barriers identified will lessen with time (e.g. technological and analytical barriers) as this technology continues to evolve.
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Affiliation(s)
- S E Walker
- TropWATER, Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Townsville, Australia.
- Marine Data Technology Hub, College of Science and Engineering, James Cook University, Townsville, Australia.
| | - M Sheaves
- Marine Data Technology Hub, College of Science and Engineering, James Cook University, Townsville, Australia
| | - N J Waltham
- TropWATER, Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Townsville, Australia
- Marine Data Technology Hub, College of Science and Engineering, James Cook University, Townsville, Australia
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6
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Sobhi S, Elzanaty A, Selim MY, Ghuniem AM, Abdelkader MF. Mobility of LoRaWAN Gateways for Efficient Environmental Monitoring in Pristine Sites. SENSORS (BASEL, SWITZERLAND) 2023; 23:1698. [PMID: 36772736 PMCID: PMC9919836 DOI: 10.3390/s23031698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 01/23/2023] [Accepted: 01/27/2023] [Indexed: 06/18/2023]
Abstract
Environmental monitoring of delicate ecosystems or pristine sites is critical to their preservation. The communication infrastructure for such monitoring should have as little impact on the natural ecosystem as possible. Because of their wide range capabilities and independence from heavy infrastructure, low-power wide area network protocols have recently been used in remote monitoring. In this regard, we propose a mobile vehicle-mounted gateway architecture for IoT data collection in communication-network-free areas. The limits of reliable communication are investigated in terms of gateway speed, throughput, and energy consumption. We investigate the performance of various gateway arrival scenarios, focusing on the trade-off between freshness of data, data collection rate, and end-node power consumption. Then we validate our findings using both real-world experiments and simulations. In addition, we present a case study exploiting the proposed architecture to provide coverage for Wadi El-Gemal national park in Egypt. The results show that reliable communication is achieved over all spreading factors (SFs) for gateway speeds up to 150 km/h with negligible performance degradation at SFs=11,12 at speeds more than 100 km/h. The synchronized transmission model ensures the best performance in terms of throughput and power consumption at the expense of the freshness of data. Nonsynchronized transmission allows time-flexible data collection at the expense of increased power consumption. The same throughput as semisynchronized transmission is achieved using four gateways at only five times the energy consumption, while a single gateway requires seventeen times the amount of energy. Furthermore, increasing the number of gateways to ten increases the throughput to the level achieved by the synchronized scenario while consuming eight times the energy.
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Affiliation(s)
- Salma Sobhi
- Wireless Communication Engineering, Information Technology Institute, Ismailia 8366004, Egypt
- Electrical Engineering Department, Faculty of Engineering, Suez Canal University, Ismailia 8366004, Egypt
| | - Ahmed Elzanaty
- Institute for Communication Systems, University of Surrey, Guildford GU2 7XH, UK
| | - Mohamed Y. Selim
- Electrical Engineering Department, Faculty of Engineering, Suez Canal University, Ismailia 8366004, Egypt
- Electrical and Computer Engineering Department, Iowa State University, Ames, IA 50011, USA
| | - Atef M. Ghuniem
- Electrical Engineering Department, Faculty of Engineering, Suez Canal University, Ismailia 8366004, Egypt
| | - Mohamed F. Abdelkader
- Wireless Communication Engineering, Information Technology Institute, Ismailia 8366004, Egypt
- Department of Electrical Engineering, Port Said University, Port Said 42526, Egypt
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7
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Yuan S, Li Y, Bao F, Xu H, Yang Y, Yan Q, Zhong S, Yin H, Xu J, Huang Z, Lin J. Marine environmental monitoring with unmanned vehicle platforms: Present applications and future prospects. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 858:159741. [PMID: 36349622 DOI: 10.1016/j.scitotenv.2022.159741] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 10/17/2022] [Accepted: 10/22/2022] [Indexed: 06/16/2023]
Abstract
Basic monitoring of the marine environment is crucial for the early warning and assessment of marine hydrometeorological conditions, climate change, and ecosystem disasters. In recent years, many marine environmental monitoring platforms have been established, such as offshore platforms, ships, or sensors placed on specially designed buoys or submerged marine structures. These platforms typically use a variety of sensors to provide high-quality observations, while they are limited by low spatial resolution and high cost during data acquisition. Satellite remote sensing allows monitoring over a larger ocean area; however, it is susceptible to cloud contamination and atmospheric effects that subject the results to large uncertainties. Unmanned vehicles have become more widely used as platforms in marine science and ocean engineering in recent years due to their ease of deployment, mobility, and the low cost involved in data acquisition. Researchers can acquire data according to their schedules and convenience, offering significant improvements over those obtained by traditional platforms. This study presents the state-of-the-art research on available unmanned vehicle observation platforms, including unmanned aerial vehicles (UAVs), underwater gliders (UGs), unmanned surface vehicles (USVs), and unmanned ships (USs), for marine environmental monitoring, and compares them with satellite remote sensing. The recent applications in marine environments have focused on marine biochemical and ecosystem features, marine physical features, marine pollution, and marine aerosols monitoring, and their integration with other products are also analysed. Additionally, the prospects of future ocean observation systems combining unmanned vehicle platforms (UVPs), global and regional autonomous platform networks, and remote sensing data are discussed.
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Affiliation(s)
- Shuyun Yuan
- School of Environment, Harbin Institute of Technology, Harbin 150059, China; Center for Oceanic and Atmospheric Science at SUSTech (COAST), Southern University of Science and Technology, Shenzhen, China
| | - Ying Li
- Center for Oceanic and Atmospheric Science at SUSTech (COAST), Southern University of Science and Technology, Shenzhen, China; Department of Ocean Sciences and Engineering, Southern University of Science and Technology, Shenzhen, China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China.
| | - Fangwen Bao
- Center for Oceanic and Atmospheric Science at SUSTech (COAST), Southern University of Science and Technology, Shenzhen, China.
| | - Haoxiang Xu
- Department of Ocean Sciences and Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Yuping Yang
- Department of Ocean Sciences and Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Qiushi Yan
- Department of Ocean Sciences and Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Shuqiao Zhong
- Department of Ocean Sciences and Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Haoyang Yin
- Department of Ocean Sciences and Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Jiajun Xu
- Department of Ocean Sciences and Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Ziwei Huang
- Department of Ocean Sciences and Engineering, Southern University of Science and Technology, Shenzhen, China
| | - Jian Lin
- Department of Ocean Sciences and Engineering, Southern University of Science and Technology, Shenzhen, China
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Pan W, Wang X, Sun Y, Wang J, Li Y, Li S. Karst vegetation coverage detection using UAV multispectral vegetation indices and machine learning algorithm. PLANT METHODS 2023; 19:7. [PMID: 36691062 PMCID: PMC9869541 DOI: 10.1186/s13007-023-00982-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Accepted: 01/13/2023] [Indexed: 06/17/2023]
Abstract
BACKGROUND Karst vegetation is of great significance for ecological restoration in karst areas. Vegetation Indices (VIs) are mainly related to plant yield which is helpful to understand the status of ecological restoration in karst areas. Recently, karst vegetation surveys have gradually shifted from field surveys to remote sensing-based methods. Coupled with the machine learning methods, the Unmanned Aerial Vehicle (UAV) multispectral remote sensing data can effectively improve the detection accuracy of vegetation and extract the important spectrum features. RESULTS In this study, UAV multispectral image data at flight altitudes of 100 m, 200 m, and 400 m were collected to be applied for vegetation detection in a karst area. The resulting ground resolutions of the 100 m, 200 m, and 400 m data are 5.29, 10.58, and 21.16 cm/pixel, respectively. Four machine learning models, including Random Forest (RF), Support Vector Machine (SVM), Gradient Boosting Machine (GBM), and Deep Learning (DL), were compared to test the performance of vegetation coverage detection. 5 spectral values (Red, Green, Blue, NIR, Red edge) and 16 VIs were selected to perform variable importance analysis on the best detection models. The results show that the best model for each flight altitude has the highest accuracy in detecting its training data (over 90%), and the GBM model constructed based on all data at all flight altitudes yields the best detection performance covering all data, with an overall accuracy of 95.66%. The variables that were significantly correlated and not correlated with the best model were the Modified Soil Adjusted Vegetation Index (MSAVI) and the Modified Anthocyanin Content Index (MACI), respectively. Finally, the best model was used to invert the complete UAV images at different flight altitudes. CONCLUSIONS In general, the GBM_all model constructed based on UAV imaging with all flight altitudes was feasible to accurately detect karst vegetation coverage. The prediction models constructed based on data from different flight altitudes had a certain similarity in the distribution of vegetation index importance. Combined with the method of visual interpretation, the karst green vegetation predicted by the best model was in good agreement with the ground truth, and other land types including hay, rock, and soil were well predicted. This study provided a methodological reference for the detection of karst vegetation coverage in eastern China.
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Affiliation(s)
- Wen Pan
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, No. 73, Daqiao Road, Fuyang, Hangzhou, 311400, Zhejiang, China
- College of Forestry, Nanjing Forestry University, Nanjing, China
| | - Xiaoyu Wang
- Chun'an County Forestry Administration, Hangzhou, Zhejiang, China
| | - Yan Sun
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, No. 73, Daqiao Road, Fuyang, Hangzhou, 311400, Zhejiang, China
- College of Forestry, Nanjing Forestry University, Nanjing, China
| | - Jia Wang
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, No. 73, Daqiao Road, Fuyang, Hangzhou, 311400, Zhejiang, China
| | - Yanjie Li
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, No. 73, Daqiao Road, Fuyang, Hangzhou, 311400, Zhejiang, China.
| | - Sheng Li
- Research Institute of Subtropical Forestry, Chinese Academy of Forestry, No. 73, Daqiao Road, Fuyang, Hangzhou, 311400, Zhejiang, China.
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Sun G, Lu H, Zhao Y, Zhou J, Jackson R, Wang Y, Xu L, Wang A, Colmer J, Ober E, Zhao Q, Han B, Zhou J. AirMeasurer: open-source software to quantify static and dynamic traits derived from multiseason aerial phenotyping to empower genetic mapping studies in rice. THE NEW PHYTOLOGIST 2022; 236:1584-1604. [PMID: 35901246 PMCID: PMC9796158 DOI: 10.1111/nph.18314] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2022] [Accepted: 05/31/2022] [Indexed: 05/11/2023]
Abstract
Low-altitude aerial imaging, an approach that can collect large-scale plant imagery, has grown in popularity recently. Amongst many phenotyping approaches, unmanned aerial vehicles (UAVs) possess unique advantages as a consequence of their mobility, flexibility and affordability. Nevertheless, how to extract biologically relevant information effectively has remained challenging. Here, we present AirMeasurer, an open-source and expandable platform that combines automated image analysis, machine learning and original algorithms to perform trait analysis using 2D/3D aerial imagery acquired by low-cost UAVs in rice (Oryza sativa) trials. We applied the platform to study hundreds of rice landraces and recombinant inbred lines at two sites, from 2019 to 2021. A range of static and dynamic traits were quantified, including crop height, canopy coverage, vegetative indices and their growth rates. After verifying the reliability of AirMeasurer-derived traits, we identified genetic variants associated with selected growth-related traits using genome-wide association study and quantitative trait loci mapping. We found that the AirMeasurer-derived traits had led to reliable loci, some matched with published work, and others helped us to explore new candidate genes. Hence, we believe that our work demonstrates valuable advances in aerial phenotyping and automated 2D/3D trait analysis, providing high-quality phenotypic information to empower genetic mapping for crop improvement.
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Affiliation(s)
- Gang Sun
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Academy for Advanced Interdisciplinary Studies, Jiangsu Collaborative Innovation Center for Modern Crop Production Co‐sponsored by Province and MinistryNanjing Agricultural UniversityNanjing210095China
| | - Hengyun Lu
- National Center for Gene Research, CAS Center for Excellence in Molecular Plant SciencesChinese Academy of SciencesShanghai200233China
| | - Yan Zhao
- National Center for Gene Research, CAS Center for Excellence in Molecular Plant SciencesChinese Academy of SciencesShanghai200233China
| | - Jie Zhou
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Academy for Advanced Interdisciplinary Studies, Jiangsu Collaborative Innovation Center for Modern Crop Production Co‐sponsored by Province and MinistryNanjing Agricultural UniversityNanjing210095China
| | - Robert Jackson
- Cambridge Crop ResearchNational Institute of Agricultural Botany (NIAB)CambridgeCB3 0LEUK
| | - Yongchun Wang
- National Center for Gene Research, CAS Center for Excellence in Molecular Plant SciencesChinese Academy of SciencesShanghai200233China
| | - Ling‐xiang Xu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Academy for Advanced Interdisciplinary Studies, Jiangsu Collaborative Innovation Center for Modern Crop Production Co‐sponsored by Province and MinistryNanjing Agricultural UniversityNanjing210095China
| | - Ahong Wang
- National Center for Gene Research, CAS Center for Excellence in Molecular Plant SciencesChinese Academy of SciencesShanghai200233China
| | - Joshua Colmer
- Earlham InstituteNorwich Research ParkNorwichNR4 7UHUK
| | - Eric Ober
- Cambridge Crop ResearchNational Institute of Agricultural Botany (NIAB)CambridgeCB3 0LEUK
| | - Qiang Zhao
- National Center for Gene Research, CAS Center for Excellence in Molecular Plant SciencesChinese Academy of SciencesShanghai200233China
| | - Bin Han
- National Center for Gene Research, CAS Center for Excellence in Molecular Plant SciencesChinese Academy of SciencesShanghai200233China
| | - Ji Zhou
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Academy for Advanced Interdisciplinary Studies, Jiangsu Collaborative Innovation Center for Modern Crop Production Co‐sponsored by Province and MinistryNanjing Agricultural UniversityNanjing210095China
- Cambridge Crop ResearchNational Institute of Agricultural Botany (NIAB)CambridgeCB3 0LEUK
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10
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Total Carbon Content Assessed by UAS Near-Infrared Imagery as a New Fire Severity Metric. REMOTE SENSING 2022. [DOI: 10.3390/rs14153632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
Abstract
The ash produced by forest fires is a complex mixture of organic and inorganic particles with many properties. Amounts of ash and char are used to roughly evaluate the impacts of a fire on nutrient cycling and ecosystem recovery. Numerous studies have suggested that fire severity can be assessed by measuring changes in ash characteristics. Traditional methods to determine fire severity are based on in situ observations, and visual approximation of changes in the forest floor and soil which are both laborious and subjective. These measures primarily reflect the level of consumption of organic layers, the deposition of ash, particularly its depth and color, and fire-induced changes in the soil. Recent studies suggested adding remote sensing techniques to the field observations and using machine learning and spectral indices to assess the effects of fires on ecosystems. While index thresholding can be easily implemented, its effectiveness over large areas is limited to pattern coverage of forest type and fire regimes. Machine learning algorithms, on the other hand, allow multivariate classifications, but learning is complex and time-consuming when analyzing space-time series. Therefore, there is currently no consensus regarding a quantitative index of fire severity. Considering that wildfires play a major role in controlling forest carbon storage and cycling in fire-suppressed forests, this study examines the use of low-cost multispectral imagery across visible and near-infrared regions collected by unmanned aerial systems to determine fire severity according to the color and chemical properties of vegetation ash. The use of multispectral imagery data might reduce the lack of precision that is part of manual color matching and produce a vast and accurate spatio-temporal severity map. The suggested severity map is based on spectral information used to evaluate chemical/mineralogical changes by deep learning algorithms. These methods quantify total carbon content and assess the corresponding fire intensity that is required to form a particular residue. By designing three learning algorithms (PLS-DA, ANN, and 1-D CNN) for two datasets (RGB images and Munsell color versus Unmanned Aerial System (UAS)-based multispectral imagery) the multispectral prediction results were excellent. Therefore, deep network-based near-infrared remote sensing technology has the potential to become an alternative reliable method to assess fire severity.
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11
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The Influence of Image Properties on High-Detail SfM Photogrammetric Surveys of Complex Geometric Landforms: The Application of a Consumer-Grade UAV Camera in a Rock Glacier Survey. REMOTE SENSING 2022. [DOI: 10.3390/rs14153528] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The detailed description of processing workflows in Structure from Motion (SfM) surveys using unmanned aerial vehicles (UAVs) is not common in geomorphological research. One of the aspects frequently overlooked in photogrammetric reconstruction is image characteristics. In this context, the present study aims to determine whether the format or properties (e.g., exposure, sharpening, lens corrections) of the images used in the SfM process can affect high-detail surveys of complex geometric landforms such as rock glaciers. For this purpose, images generated (DNG and JPEG) and derived (TIFF) from low-cost UAV systems widely used by the scientific community are applied. The case study is carried out through a comprehensive flight plan with ground control and differences among surveys are assessed visually and geometrically. Thus, geometric evaluation is based on 2.5D and 3D perspectives and a ground-based LiDAR benchmark. The results show that the lens profiles applied by some low-cost UAV cameras to the images can significantly alter the geometry among photo-reconstructions, to the extent that they can influence monitoring activities with variations of around ±5 cm in areas with close control and over ±20 cm (10 times the ground sample distance) on surfaces outside the ground control surroundings. The terrestrial position of the laser scanner measurements and the scene changing topography results in uneven surface sampling, which makes it challenging to determine which set of images best fit the LiDAR benchmark. Other effects of the image properties are found in minor variations scattered throughout the survey or modifications to the RGB values of the point clouds or orthomosaics, with no critical impact on geomorphological studies.
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12
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Abstract
In recent years, technological advances have led to the increasing use of unmanned aerial vehicles (UAVs) for forestry applications. One emerging field for drone application is forest health monitoring (FHM). Common approaches for FHM involve small-scale resource-extensive fieldwork combined with traditional remote sensing platforms. However, the highly dynamic nature of forests requires timely and repetitive data acquisition, often at very high spatial resolution, where conventional remote sensing techniques reach the limits of feasibility. UAVs have shown that they can meet the demands of flexible operation and high spatial resolution. This is also reflected in a rapidly growing number of publications using drones to study forest health. Only a few reviews exist which do not cover the whole research history of UAV-based FHM. Since a comprehensive review is becoming critical to identify research gaps, trends, and drawbacks, we offer a systematic analysis of 99 papers covering the last ten years of research related to UAV-based monitoring of forests threatened by biotic and abiotic stressors. Advances in drone technology are being rapidly adopted and put into practice, further improving the economical use of UAVs. Despite the many advantages of UAVs, such as their flexibility, relatively low costs, and the possibility to fly below cloud cover, we also identified some shortcomings: (1) multitemporal and long-term monitoring of forests is clearly underrepresented; (2) the rare use of hyperspectral and LiDAR sensors must drastically increase; (3) complementary data from other RS sources are not sufficiently being exploited; (4) a lack of standardized workflows poses a problem to ensure data uniformity; (5) complex machine learning algorithms and workflows obscure interpretability and hinders widespread adoption; (6) the data pipeline from acquisition to final analysis often relies on commercial software at the expense of open-source tools.
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13
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Johansen K, Dunne AF, Tu YH, Jones BH, McCabe MF. Monitoring coastal water flow dynamics using sub-daily high-resolution SkySat satellite and UAV-based imagery. WATER RESEARCH 2022; 219:118531. [PMID: 35526428 DOI: 10.1016/j.watres.2022.118531] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Revised: 04/08/2022] [Accepted: 04/28/2022] [Indexed: 06/14/2023]
Abstract
Sub-daily tracking of dynamic features and events using high spatial resolution satellite imagery has only recently become possible, with advanced observational capabilities now available through tasking of satellite constellations. Here, we provide a first of its kind demonstration of using sub-daily 0.50 m resolution SkySat imagery to track coastal water flows, combining these data with object-based detection and a machine-learning approach to map the extent and concentration of two dye plumes. Coincident high-frequency unmanned aerial vehicle (UAV) imagery was also employed for quantitative modeling of dye concentration and evaluation of the sub-daily satellite-based dye tracking. Our results show that sub-daily SkySat imagery can track dye plume extent with low omission (8.73-16.05%) and commission errors (0.32-2.77%) and model dye concentration (coefficient of determination = 0.73; root mean square error = 28.68 ppb) with the assistance of high-frequency UAV data. The results also demonstrate the capabilities of using UAV imagery for scaling between field data and satellite imagery for tracking coastal water flow dynamics. This research has implications for monitoring of water flows and nutrient or pollution exchange, and it also demonstrates the capabilities of higher temporal resolution satellite data for delivering further insights into dynamic processes of coastal systems.
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Affiliation(s)
- Kasper Johansen
- Hydrology, Agricultural and Land Observation, Water Desalination and Reuse Center, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia.
| | - Aislinn F Dunne
- Reef Ecology Lab, Red Sea Research Center, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Yu-Hsuan Tu
- Hydrology, Agricultural and Land Observation, Water Desalination and Reuse Center, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Burton H Jones
- Reef Ecology Lab, Red Sea Research Center, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Matthew F McCabe
- Hydrology, Agricultural and Land Observation, Water Desalination and Reuse Center, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
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14
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Recent Advances in Forest Insect Pests and Diseases Monitoring Using UAV-Based Data: A Systematic Review. FORESTS 2022. [DOI: 10.3390/f13060911] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Unmanned aerial vehicles (UAVs) are platforms that have been increasingly used over the last decade to collect data for forest insect pest and disease (FIPD) monitoring. These machines provide flexibility, cost efficiency, and a high temporal and spatial resolution of remotely sensed data. The purpose of this review is to summarize recent contributions and to identify knowledge gaps in UAV remote sensing for FIPD monitoring. A systematic review was performed using the preferred reporting items for systematic reviews and meta-analysis (PRISMA) protocol. We reviewed the full text of 49 studies published between 2015 and 2021. The parameters examined were the taxonomic characteristics, the type of UAV and sensor, data collection and pre-processing, processing and analytical methods, and software used. We found that the number of papers on this topic has increased in recent years, with most being studies located in China and Europe. The main FIPDs studied were pine wilt disease (PWD) and bark beetles (BB) using UAV multirotor architectures. Among the sensor types, multispectral and red–green–blue (RGB) bands were preferred for the monitoring tasks. Regarding the analytical methods, random forest (RF) and deep learning (DL) classifiers were the most frequently applied in UAV imagery processing. This paper discusses the advantages and limitations associated with the use of UAVs and the processing methods for FIPDs, and research gaps and challenges are presented.
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15
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sUAS Monitoring of Coastal Environments: A Review of Best Practices from Field to Lab. DRONES 2022. [DOI: 10.3390/drones6060142] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Coastal environments are some of the most dynamic environments in the world. As they are constantly changing, so are the technologies and techniques we use to map and monitor them. The rapid advancement of sUAS-based remote sensing calls for rigorous field and processing workflows so that more reliable and consistent sUAS projects of coastal environments are carried out. Here, we synthesize the best practices to create sUAS photo-based surveying and processing workflows that can be used and modified by coastal scientists, depending on their project objective. While we aim to simplify the complexity of these workflows, we note that the nature of this work is a craft that carefully combines art, science, and technology. sUAS LiDAR is the next advancement in mapping and monitoring coastal environments. Therefore, future work should consider synthesizing best practices to develop rigorous field and data processing workflows used for sUAS LiDAR-based projects of coastal environments.
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16
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Kuska MT, Heim RHJ, Geedicke I, Gold KM, Brugger A, Paulus S. Digital plant pathology: a foundation and guide to modern agriculture. JOURNAL OF PLANT DISEASES AND PROTECTION : SCIENTIFIC JOURNAL OF THE GERMAN PHYTOMEDICAL SOCIETY (DPG) 2022; 129:457-468. [PMID: 35502325 PMCID: PMC9046714 DOI: 10.1007/s41348-022-00600-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Accepted: 03/17/2022] [Indexed: 06/14/2023]
Abstract
Over the last 20 years, researchers in the field of digital plant pathology have chased the goal to implement sensors, machine learning and new technologies into knowledge-based methods for plant phenotyping and plant protection. However, the application of swiftly developing technologies has posed many challenges. Greenhouse and field applications are complex and differ in their study design requirements. Selecting a sensor type (e.g., thermography or hyperspectral imaging), sensor platform (e.g., rovers, unmanned aerial vehicles, or satellites), and the problem-specific spatial and temporal scale adds to the challenge as all pathosystems are unique and differ in their interactions and symptoms, or lack thereof. Adding host-pathogen-environment interactions across time and space increases the complexity even further. Large data sets are necessary to enable a deeper understanding of these interactions. Therefore, modern machine learning methods are developed to realize the fast data analysis of such complex data sets. This reduces not only human effort but also enables an objective data perusal. Especially deep learning approaches show a high potential to identify probable cohesive parameters during plant-pathogen-environment interactions. Unfortunately, the performance and reliability of developed methods are often doubted by the potential user. Gaining their trust is thus needed for real field applications. Linking biological causes to machine learning features and a clear communication, even for non-experts of such results, is a crucial task that will bridge the gap between theory and praxis of a newly developed application. Therefore, we suggest a global connection of experts and data as the basis for defining a common and goal-oriented research roadmap. Such high interconnectivity will likely increase the chances of swift, successful progress in research and practice. A coordination within international excellence clusters will be useful to reduce redundancy of research while supporting the creation and progress of complementary research. With this review, we would like to discuss past research, achievements, as well as recurring and new challenges. Having such a retrospect available, we will attempt to reveal future challenges and provide a possible direction elevating the next decade of research in digital plant pathology.
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Affiliation(s)
- Matheus Thomas Kuska
- North Rhine-Westphalia Chamber of Agriculture, Gartenstraße 11, 50765 Cologne, Germany
| | - René H. J. Heim
- Institute of Sugar Beet Research, Holtenser Landstraße 77, 37079 Göttingen, Germany
| | - Ina Geedicke
- Institute of Sugar Beet Research, Holtenser Landstraße 77, 37079 Göttingen, Germany
| | - Kaitlin M. Gold
- Plant Pathology and Plant-Microbe Biology College of Agriculture and Life Science, Cornell University, Cornell AgriTech, 15 Castle Creek Drive, Geneva, 14456 USA
| | - Anna Brugger
- Bildungs- und Beratungszentrum Arenenberg, Arenenberg 8, 8268 Salenstein, Switzerland
| | - Stefan Paulus
- Institute of Sugar Beet Research, Holtenser Landstraße 77, 37079 Göttingen, Germany
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17
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On the 3D Reconstruction of Coastal Structures by Unmanned Aerial Systems with Onboard Global Navigation Satellite System and Real-Time Kinematics and Terrestrial Laser Scanning. REMOTE SENSING 2022. [DOI: 10.3390/rs14061485] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
A wide variety of hard structures protect coastal activities and communities from the action of tides and waves worldwide. It is fundamental to monitor the integrity of coastal structures, as interventions and repairs may be needed in case of damages. This work compares the effectiveness of an Unmanned Aerial System (UAS) and a Terrestrial Laser Scanner (TLS) to reproduce the 3D geometry of a rocky groin. The Structure-from-Motion (SfM) photogrammetry technique applied on drone images generated a 3D point cloud and a Digital Surface Model (DSM) without data gaps. Even though the TLS returned a 3D point cloud four times denser than the drone one, the TLS returned a DSM which was not representing about 16% of the groin (data gaps). This was due to the occlusions encountered by the low-lying scans determined by the displaced rocks composing the groin. Given also that the survey by UAS was about eight time faster than the TLS, the SFM-MV applied on UAS images was the most suitable technique to reconstruct the rocky groin. The UAS remote sensing technique can be considered a valid alternative to monitor all types of coastal structures, to improve the inspection of likely damages, and to support coastal structure management.
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18
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Lou HH, Mukherjee R, Wang Z, Olsen T, Diwekar U, Lin S. A New Area of Utilizing Industrial Internet of Things in Environmental Monitoring. FRONTIERS IN CHEMICAL ENGINEERING 2022. [DOI: 10.3389/fceng.2022.842514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Due to environmental regulations continually reducing emission quantity allowed over time, there is a growing need for adaptable and feasible environmental monitoring, such as emission, wastewater quality, and air pollution monitoring, for the process industry (and surrounding communities). Alternative environmental monitoring and process monitoring technologies based on industrial internet of things (IIoT) and artificial intelligence (AI) enable the process industry to take a proactive approach toward the environment and asset integrity management. The monitoring devices can be deployed in a stationary or dynamic manner. In this study, the emerging trend and various applications of IIoT and advanced data analytics methodologies in environmental monitoring are reviewed. An example showing challenges and research needs in sensor placement is given. Future directions in technology, regulation, and application have been discussed as well.
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19
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Beached and Floating Litter Surveys by Unmanned Aerial Vehicles: Operational Analogies and Differences. REMOTE SENSING 2022. [DOI: 10.3390/rs14061336] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
The abundance of litter pollution in the marine environment has been increasing globally. Remote sensing techniques are valuable tools to advance knowledge on litter abundance, distribution and dynamics. Images collected by Unmanned Aerial Vehicles (UAV, aka drones) are highly efficient to map and monitor local beached (BL) and floating (FL) marine litter items. In this work, the operational insights to carry out both BL and FL surveys using UAVs are detailly described. In particular, flight planning and deployment, along with image products processing and analysis, are reported and compared. Furthermore, analogies and differences between UAV-based BL and FL mapping are discussed, with focus on the challenges related to BL and FL item detection and recognition. Given the efficiency of UAV to map BL and FL, this remote sensing technique can replace traditional methods for litter monitoring, further improving the knowledge of marine litter dynamics in the marine environment. This communication aims at helping researchers in planning and performing optimized drone-based BL and FL surveys.
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20
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Fascista A. Toward Integrated Large-Scale Environmental Monitoring Using WSN/UAV/Crowdsensing: A Review of Applications, Signal Processing, and Future Perspectives. SENSORS (BASEL, SWITZERLAND) 2022; 22:1824. [PMID: 35270970 PMCID: PMC8914857 DOI: 10.3390/s22051824] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/18/2022] [Revised: 02/11/2022] [Accepted: 02/22/2022] [Indexed: 01/04/2023]
Abstract
Fighting Earth's degradation and safeguarding the environment are subjects of topical interest and sources of hot debate in today's society. According to the United Nations, there is a compelling need to take immediate actions worldwide and to implement large-scale monitoring policies aimed at counteracting the unprecedented levels of air, land, and water pollution. This requires going beyond the legacy technologies currently employed by government authorities and adopting more advanced systems that guarantee a continuous and pervasive monitoring of the environment in all its different aspects. In this paper, we take the research on integrated and large-scale environmental monitoring a step further by providing a comprehensive review that covers transversally all the main applications of wireless sensor networks (WSNs), unmanned aerial vehicles (UAVs), and crowdsensing monitoring technologies. By outlining the available solutions and current limitations, we identify in the cooperation among terrestrial (WSN/crowdsensing) and aerial (UAVs) sensing, coupled with the adoption of advanced signal processing techniques, the major pillars at the basis of future integrated (air, land, and water) and large-scale environmental monitoring systems. This review not only consolidates the progresses achieved in the field of environmental monitoring, but also sheds new lights on potential future research directions and synergies among different research areas.
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Affiliation(s)
- Alessio Fascista
- Department of Engineering, University of Salento, Via Monteroni, 73100 Lecce, Italy
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21
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Sliusar N, Filkin T, Huber-Humer M, Ritzkowski M. Drone technology in municipal solid waste management and landfilling: A comprehensive review. WASTE MANAGEMENT (NEW YORK, N.Y.) 2022; 139:1-16. [PMID: 34923184 DOI: 10.1016/j.wasman.2021.12.006] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Revised: 10/24/2021] [Accepted: 12/04/2021] [Indexed: 06/14/2023]
Abstract
The paper discusses the experience of using unmanned aerial vehicles (UAV) in the management of municipal solid waste landfills and dumpsites. Although the use of drones at waste disposal sites (WDS) has a more than ten-year history, the active application of these technologies has increased in the last 3-4 years. The paper analyzes scientific publications of 2010-2021 (July) and identifies the main WDS management task groups for which the solution of UAV can be used. It illustrates that most of the research is devoted to studying spatial and volumetric characteristics of landfills, which is connected with the practical needs. About a quarter of the publications focus on monitoring the emissions of landfill gas or its individual components, mainly methane. Issues of a comprehensive assessment of the technological and environmental safety of landfills and dumps are covered in the scientific literature fragmentarily and insufficiently. At the same time, the current level of technologies for collecting and processing remote sensing air data (UAV, sensors for aerial imagery, software for photogrammetric processing of aerial imagery data, geographic information systems (GIS)) makes it possible to identify and assess many environmental effects of landfills and dumps and to monitor compliance with the standards for the landfills operation, which could bring management of these facilities to a fundamentally different level. Promising areas of further research in the field of UAV application at WDS are indicated: development of processes for automatic interpretation of aerial imagery materials; product analysis of photogrammetric data processing in a GIS environment, etc.
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Affiliation(s)
- Natalia Sliusar
- Environmental Protection Department, Perm National Research Polytechnic University, Komsomolskiy Prospect, 29, Perm 614990, Russia.
| | - Timofey Filkin
- Environmental Protection Department, Perm National Research Polytechnic University, Komsomolskiy Prospect, 29, Perm 614990, Russia.
| | - Marion Huber-Humer
- Institute of Waste Management, University of Natural Resources and Life Sciences, Vienna (BOKU), Muthgasse 107/III, 1190 Wien, Austria.
| | - Marco Ritzkowski
- HiiCCE - Hamburg Institute for Innovation, Climate Protection and Circular Economy GmbH, Unternehmen der Stadtreinigung Hamburg AöR, Kritenbarg 7, 22391 Hamburg, Germany.
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22
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Cunliffe AM, Anderson K, Boschetti F, Brazier RE, Graham HA, Myers‐Smith IH, Astor T, Boer MM, Calvo LG, Clark PE, Cramer MD, Encinas‐Lara MS, Escarzaga SM, Fernández‐Guisuraga JM, Fisher AG, Gdulová K, Gillespie BM, Griebel A, Hanan NP, Hanggito MS, Haselberger S, Havrilla CA, Heilman P, Ji W, Karl JW, Kirchhoff M, Kraushaar S, Lyons MB, Marzolff I, Mauritz ME, McIntire CD, Metzen D, Méndez‐Barroso LA, Power SC, Prošek J, Sanz‐Ablanedo E, Sauer KJ, Schulze‐Brüninghoff D, Šímová P, Sitch S, Smit JL, Steele CM, Suárez‐Seoane S, Vargas SA, Villarreal M, Visser F, Wachendorf M, Wirnsberger H, Wojcikiewicz R. Global application of an unoccupied aerial vehicle photogrammetry protocol for predicting aboveground biomass in non-forest ecosystems. REMOTE SENSING IN ECOLOGY AND CONSERVATION 2022; 8:57-71. [PMID: 35873085 PMCID: PMC9290598 DOI: 10.1002/rse2.228] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2021] [Revised: 06/01/2021] [Accepted: 06/07/2021] [Indexed: 05/03/2023]
Abstract
Non-forest ecosystems, dominated by shrubs, grasses and herbaceous plants, provide ecosystem services including carbon sequestration and forage for grazing, and are highly sensitive to climatic changes. Yet these ecosystems are poorly represented in remotely sensed biomass products and are undersampled by in situ monitoring. Current global change threats emphasize the need for new tools to capture biomass change in non-forest ecosystems at appropriate scales. Here we developed and deployed a new protocol for photogrammetric height using unoccupied aerial vehicle (UAV) images to test its capability for delivering standardized measurements of biomass across a globally distributed field experiment. We assessed whether canopy height inferred from UAV photogrammetry allows the prediction of aboveground biomass (AGB) across low-stature plant species by conducting 38 photogrammetric surveys over 741 harvested plots to sample 50 species. We found mean canopy height was strongly predictive of AGB across species, with a median adjusted R 2 of 0.87 (ranging from 0.46 to 0.99) and median prediction error from leave-one-out cross-validation of 3.9%. Biomass per-unit-of-height was similar within but different among, plant functional types. We found that photogrammetric reconstructions of canopy height were sensitive to wind speed but not sun elevation during surveys. We demonstrated that our photogrammetric approach produced generalizable measurements across growth forms and environmental settings and yielded accuracies as good as those obtained from in situ approaches. We demonstrate that using a standardized approach for UAV photogrammetry can deliver accurate AGB estimates across a wide range of dynamic and heterogeneous ecosystems. Many academic and land management institutions have the technical capacity to deploy these approaches over extents of 1-10 ha-1. Photogrammetric approaches could provide much-needed information required to calibrate and validate the vegetation models and satellite-derived biomass products that are essential to understand vulnerable and understudied non-forested ecosystems around the globe.
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23
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Direct Georeferencing UAV-SfM in High-Relief Topography: Accuracy Assessment and Alternative Ground Control Strategies along Steep Inaccessible Rock Slopes. REMOTE SENSING 2022. [DOI: 10.3390/rs14030490] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Steep rock slopes present key opportunities and challenges within Earth science applications. Due to partial or complete inaccessibility, high-precision surveys of these high-relief landscapes remain a challenge. Direct georeferencing (DG) of unoccupied aerial vehicles (UAVs) with advanced onboard GNSS receivers presents opportunities to generate high-resolution 3D datasets without ground-based access to the study area. However, recent research has revealed large vertical errors using DG that may prove problematic in near-vertical terrain. To address these concerns, we examined more than 75 photogrammetric UAV-datasets with various imaging angles (nadir, oblique, and combinations) and ground control scenarios, including DG, along a steep slope exposure. Results demonstrate that mean errors in DG scenarios are up to 0.12 m higher than datasets using integrated georeferencing with well-distributed GCPs. Inclusion of GCPs greatly reduced mean error values but had limited influence on precision (<0.01 m) for any given imaging strategy. Use of multiple image angles resulted in the highest precisions, regardless of georeferencing strategy. These findings have implications for applications requiring the highest precision and accuracy (e.g., geotechnical engineering, hazard mitigation and mapping, and geomorphic change detection), which should consider using ground control whenever possible. However, for applications less concerned with absolute accuracy, our results show that DG datasets provide strong internal consistency and relative accuracy that may be suitable for high precision measurements within a model, without use of ground control.
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Underwater Drone Architecture for Marine Digital Twin: Lessons Learned from SUSHI DROP Project. SENSORS 2022; 22:s22030744. [PMID: 35161495 PMCID: PMC8839495 DOI: 10.3390/s22030744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 01/14/2022] [Accepted: 01/16/2022] [Indexed: 12/10/2022]
Abstract
The ability to observe the world has seen significant developments in the last few decades, alongside the techniques and methodologies to derive accurate digital replicas of observed environments. Underwater ecosystems present greater challenges and remain largely unexplored, but the need for reliable and up-to-date information motivated the birth of the Interreg Italy–Croatia SUSHI DROP Project (SUstainable fiSHeries wIth DROnes data Processing). The aim of the project is to map ecosystems for sustainable fishing and to achieve this goal a prototype of an Unmanned Underwater Vehicle (UUV), named Blucy, has been designed and developed. Blucy was deployed during project missions for surveying the benthic zone in deep waters of the Adriatic Sea with non-invasive techniques compared to the use of trawl nets. This article describes the strategies followed, the instruments applied and the challenges to be overcome to obtain an accurately georeferenced underwater survey with the goal of creating a marine digital twin.
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25
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Demystifying the Differences between Structure-from-MotionSoftware Packages for Pre-Processing Drone Data. DRONES 2022. [DOI: 10.3390/drones6010024] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
With the increased availability of low-cost, off-the-shelf drone platforms, drone data become easy to capture and are now a key component of environmental assessments and monitoring. Once the data are collected, there are many structure-from-motion (SfM) photogrammetry software options available to pre-process the data into digital elevation models (DEMs) and orthomosaics for further environmental analysis. However, not all software packages are created equal, nor are their outputs. Here, we evaluated the workflows and output products of four desktop SfM packages (AgiSoft Metashape, Correlator3D, Pix4Dmapper, WebODM), across five input datasets representing various ecosystems. We considered the processing times, output file characteristics, colour representation of orthomosaics, geographic shift, visual artefacts, and digital surface model (DSM) elevation values. No single software package was determined the “winner” across all metrics, but we hope our results help others demystify the differences between the options, allowing users to make an informed decision about which software and parameters to select for their specific application. Our comparisons highlight some of the challenges that may arise when comparing datasets that have been processed using different parameters and different software packages, thus demonstrating a need to provide metadata associated with processing workflows.
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Saunders D, Nguyen H, Cowen S, Magrath M, Marsh K, Bell S, Bobruk J. Radio-tracking wildlife with drones: a viewshed analysis quantifying survey coverage across diverse landscapes. WILDLIFE RESEARCH 2022. [DOI: 10.1071/wr21033] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Wan Q, Brede B, Smigaj M, Kooistra L. Factors Influencing Temperature Measurements from Miniaturized Thermal Infrared (TIR) Cameras: A Laboratory-Based Approach. SENSORS 2021; 21:s21248466. [PMID: 34960559 PMCID: PMC8706234 DOI: 10.3390/s21248466] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/22/2021] [Revised: 12/11/2021] [Accepted: 12/13/2021] [Indexed: 11/16/2022]
Abstract
The workflow for estimating the temperature in agricultural fields from multiple sensors needs to be optimized upon testing each type of sensor’s actual user performance. In this sense, readily available miniaturized UAV-based thermal infrared (TIR) cameras can be combined with proximal sensors in measuring the surface temperature. Before the two types of cameras can be operationally used in the field, laboratory experiments are needed to fully understand their capabilities and all the influencing factors. We present the measurement results of laboratory experiments of UAV-borne WIRIS 2nd GEN and handheld FLIR E8-XT cameras. For these uncooled sensors, it took 30 to 60 min for the measured signal to stabilize and the sensor temperature drifted continuously. The drifting sensor temperature was strongly correlated to the measured signal. Specifically for WIRIS, the automated non-uniformity correction (NUC) contributed to extra uncertainty in measurements. Another problem was the temperature measurement dependency on various ambient environmental parameters. An increase in the measuring distance resulted in the underestimation of surface temperature, though the degree of change may also come from reflected radiation from neighboring objects, water vapor absorption, and the object size in the field of view (FOV). Wind and radiation tests suggested that these factors can contribute to the uncertainty of several Celsius degrees in measured results. Based on these indoor experiment results, we provide a list of suggestions on the potential practices for deriving accurate temperature data from radiometric miniaturized TIR cameras in actual field practices for (agro-)environmental research.
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Affiliation(s)
- Quanxing Wan
- Laboratory of Geo-Information Science and Remote Sensing, Wageningen University & Research, Droevendaalsesteeg 3, 6708 PB Wageningen, The Netherlands; (B.B.); (M.S.); (L.K.)
- Correspondence: ; Tel.: +31-0-613-221-061
| | - Benjamin Brede
- Laboratory of Geo-Information Science and Remote Sensing, Wageningen University & Research, Droevendaalsesteeg 3, 6708 PB Wageningen, The Netherlands; (B.B.); (M.S.); (L.K.)
- Helmholtz Center Potsdam GFZ German Research Centre for Geosciences, Section 1.4 Remote Sensing and Geoinformatics, Telegrafenberg, 14473 Potsdam, Germany
| | - Magdalena Smigaj
- Laboratory of Geo-Information Science and Remote Sensing, Wageningen University & Research, Droevendaalsesteeg 3, 6708 PB Wageningen, The Netherlands; (B.B.); (M.S.); (L.K.)
- School of Geography, Politics and Sociology, Newcastle University, Newcastle upon Tyne NE1 7RU, UK
| | - Lammert Kooistra
- Laboratory of Geo-Information Science and Remote Sensing, Wageningen University & Research, Droevendaalsesteeg 3, 6708 PB Wageningen, The Netherlands; (B.B.); (M.S.); (L.K.)
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Myburgh A, Botha H, Downs CT, Woodborne SM. The Application and Limitations of a Low-Cost UAV Platform and Open-Source Software Combination for Ecological Mapping and Monitoring. AFRICAN JOURNAL OF WILDLIFE RESEARCH 2021. [DOI: 10.3957/056.051.0166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Affiliation(s)
- Albert Myburgh
- Centre for Functional Biodiversity, School of Life Sciences, University of KwaZulu-Natal, Private Bag X01, Scottsville, Pietermaritzburg, 3209 South Africa
| | - Hannes Botha
- Scientific Services, Mpumalanga Tourism and Parks Agency, Nelspruit, South Africa
| | - Colleen T. Downs
- Centre for Functional Biodiversity, School of Life Sciences, University of KwaZulu-Natal, Private Bag X01, Scottsville, Pietermaritzburg, 3209 South Africa
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Machwitz M, Pieruschka R, Berger K, Schlerf M, Aasen H, Fahrner S, Jiménez-Berni J, Baret F, Rascher U. Bridging the Gap Between Remote Sensing and Plant Phenotyping-Challenges and Opportunities for the Next Generation of Sustainable Agriculture. FRONTIERS IN PLANT SCIENCE 2021; 12:749374. [PMID: 34751225 PMCID: PMC8571019 DOI: 10.3389/fpls.2021.749374] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Accepted: 09/27/2021] [Indexed: 05/27/2023]
Affiliation(s)
- Miriam Machwitz
- Department of Environmental Research and Innovation, Luxembourg Institute of Science and Technology, Belval, Luxembourg
| | - Roland Pieruschka
- Institute of Bio and Geosciences, Plant Sciences, Forschungszentrum Jülich, Helmholtz-Verband Deutscher Forschungszentren, Jülich, Germany
| | - Katja Berger
- Department of Geography, Ludwig-Maximilians-Universität München, Munich, Germany
| | - Martin Schlerf
- Department of Environmental Research and Innovation, Luxembourg Institute of Science and Technology, Belval, Luxembourg
| | - Helge Aasen
- Department of Environmental Systems Science, Crop Science, Eidgenössische Technische Hochschule (ETH) Zurich, Zurich, Switzerland
| | - Sven Fahrner
- Institute of Bio and Geosciences, Plant Sciences, Forschungszentrum Jülich, Helmholtz-Verband Deutscher Forschungszentren, Jülich, Germany
| | - Jose Jiménez-Berni
- Instituto de Agricultura Sostenible, Consejo Superior de Investigaciones Científicas, Cordoba, Spain
| | | | - Uwe Rascher
- Forschungszentrum Jülich, Institute of Bio- and Geosciences Plant Sciences (IBG-2), Jülich, Germany
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Stanschewski CS, Rey E, Fiene G, Craine EB, Wellman G, Melino VJ, S. R. Patiranage D, Johansen K, Schmöckel SM, Bertero D, Oakey H, Colque-Little C, Afzal I, Raubach S, Miller N, Streich J, Amby DB, Emrani N, Warmington M, Mousa MAA, Wu D, Jacobson D, Andreasen C, Jung C, Murphy K, Bazile D, Tester M. Quinoa Phenotyping Methodologies: An International Consensus. PLANTS (BASEL, SWITZERLAND) 2021; 10:1759. [PMID: 34579292 PMCID: PMC8472428 DOI: 10.3390/plants10091759] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Revised: 08/09/2021] [Accepted: 08/12/2021] [Indexed: 11/30/2022]
Abstract
Quinoa is a crop originating in the Andes but grown more widely and with the genetic potential for significant further expansion. Due to the phenotypic plasticity of quinoa, varieties need to be assessed across years and multiple locations. To improve comparability among field trials across the globe and to facilitate collaborations, components of the trials need to be kept consistent, including the type and methods of data collected. Here, an internationally open-access framework for phenotyping a wide range of quinoa features is proposed to facilitate the systematic agronomic, physiological and genetic characterization of quinoa for crop adaptation and improvement. Mature plant phenotyping is a central aspect of this paper, including detailed descriptions and the provision of phenotyping cards to facilitate consistency in data collection. High-throughput methods for multi-temporal phenotyping based on remote sensing technologies are described. Tools for higher-throughput post-harvest phenotyping of seeds are presented. A guideline for approaching quinoa field trials including the collection of environmental data and designing layouts with statistical robustness is suggested. To move towards developing resources for quinoa in line with major cereal crops, a database was created. The Quinoa Germinate Platform will serve as a central repository of data for quinoa researchers globally.
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Affiliation(s)
- Clara S. Stanschewski
- Center for Desert Agriculture, Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia; (C.S.S.); (E.R.); (G.F.); (G.W.); (V.J.M.); (D.S.R.P.)
| | - Elodie Rey
- Center for Desert Agriculture, Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia; (C.S.S.); (E.R.); (G.F.); (G.W.); (V.J.M.); (D.S.R.P.)
| | - Gabriele Fiene
- Center for Desert Agriculture, Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia; (C.S.S.); (E.R.); (G.F.); (G.W.); (V.J.M.); (D.S.R.P.)
| | - Evan B. Craine
- Department of Crop and Soil Sciences, Washington State University, Pullman, WA 99164, USA; (E.B.C.); (K.M.)
| | - Gordon Wellman
- Center for Desert Agriculture, Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia; (C.S.S.); (E.R.); (G.F.); (G.W.); (V.J.M.); (D.S.R.P.)
| | - Vanessa J. Melino
- Center for Desert Agriculture, Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia; (C.S.S.); (E.R.); (G.F.); (G.W.); (V.J.M.); (D.S.R.P.)
| | - Dilan S. R. Patiranage
- Center for Desert Agriculture, Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia; (C.S.S.); (E.R.); (G.F.); (G.W.); (V.J.M.); (D.S.R.P.)
- Plant Breeding Institute, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany; (N.E.); (C.J.)
| | - Kasper Johansen
- Water Desalination and Reuse Center, King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia;
| | - Sandra M. Schmöckel
- Department Physiology of Yield Stability, Institute of Crop Science, University of Hohenheim, 70599 Stuttgart, Germany;
| | - Daniel Bertero
- Department of Plant Production, School of Agriculture, University of Buenos Aires, Buenos Aires C1417DSE, Argentina;
| | - Helena Oakey
- Robinson Research Institute, Adelaide Medical School, University of Adelaide, Adelaide, SA 5005, Australia;
| | - Carla Colque-Little
- Department of Plant and Environmental Sciences, University of Copenhagen, DK-2630 Taastrup, Denmark; (C.C.-L.); (D.B.A.); (C.A.)
| | - Irfan Afzal
- Department of Agronomy, University of Agriculture, Faisalabad 38000, Pakistan;
| | - Sebastian Raubach
- Department of Information and Computational Sciences, The James Hutton Institute, Invergowrie, Dundee AB15 8QH, UK;
| | - Nathan Miller
- Department of Botany, University of Wisconsin, 430 Lincoln Dr, Madison, WI 53706, USA;
| | - Jared Streich
- Biosciences, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA; (J.S.); (D.J.)
| | - Daniel Buchvaldt Amby
- Department of Plant and Environmental Sciences, University of Copenhagen, DK-2630 Taastrup, Denmark; (C.C.-L.); (D.B.A.); (C.A.)
| | - Nazgol Emrani
- Plant Breeding Institute, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany; (N.E.); (C.J.)
| | - Mark Warmington
- Department of Primary Industries and Regional Development, Agriculture and Food, Kununurra, WA 6743, Australia;
| | - Magdi A. A. Mousa
- Department of Arid Land Agriculture, Faculty of Meteorology, Environment and Arid Land Agriculture, King Abdulaziz University, Jeddah 21589, Saudi Arabia;
- Department of Vegetables, Faculty of Agriculture, Assiut University, Assiut 71526, Egypt
| | - David Wu
- Shanxi Jiaqi Agri-Tech Co., Ltd., Taiyuan 030006, China;
| | - Daniel Jacobson
- Biosciences, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA; (J.S.); (D.J.)
| | - Christian Andreasen
- Department of Plant and Environmental Sciences, University of Copenhagen, DK-2630 Taastrup, Denmark; (C.C.-L.); (D.B.A.); (C.A.)
| | - Christian Jung
- Plant Breeding Institute, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany; (N.E.); (C.J.)
| | - Kevin Murphy
- Department of Crop and Soil Sciences, Washington State University, Pullman, WA 99164, USA; (E.B.C.); (K.M.)
| | - Didier Bazile
- CIRAD, UMR SENS, 34398 Montpellier, France;
- SENS, CIRAD, IRD, University Paul Valery Montpellier 3, 34090 Montpellier, France
| | - Mark Tester
- Center for Desert Agriculture, Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia; (C.S.S.); (E.R.); (G.F.); (G.W.); (V.J.M.); (D.S.R.P.)
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Abstract
Videos acquired from Unmanned Aerial Systems (UAS) allow for monitoring river systems at high spatial and temporal resolutions providing unprecedented datasets for hydrological and hydraulic applications. The cost-effectiveness of these measurement methods stimulated the diffusion of image-based frameworks and approaches at scientific and operational levels. Moreover, their application in different environmental contexts gives us the opportunity to explore their reliability, potentialities and limitations, and future perspectives and developments. This paper analyses the recent progress on this topic, with a special focus on the main challenges to foster future research studies.
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Influence of Spatial Resolution for Vegetation Indices’ Extraction Using Visible Bands from Unmanned Aerial Vehicles’ Orthomosaics Datasets. REMOTE SENSING 2021. [DOI: 10.3390/rs13163238] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The consolidation of unmanned aerial vehicle (UAV) photogrammetric techniques for campaigns with high and medium observation scales has triggered the development of new application areas. Most of these vehicles are equipped with common visible-band sensors capable of mapping areas of interest at various spatial resolutions. It is often necessary to identify vegetated areas for masking purposes during the postprocessing phase, excluding them for the digital elevation models (DEMs) generation or change detection purposes. However, vegetation can be extracted using sensors capable of capturing the near-infrared part of the spectrum, which cannot be recorded by visible (RGB) cameras. In this study, after reviewing different visible-band vegetation indices in various environments using different UAV technology, the influence of the spatial resolution of orthomosaics generated by photogrammetric processes in the vegetation extraction was examined. The triangular greenness index (TGI) index provided a high level of separability between vegetation and nonvegetation areas for all case studies in any spatial resolution. The efficiency of the indices remained fundamentally linked to the context of the scenario under investigation, and the correlation between spatial resolution and index incisiveness was found to be more complex than might be trivially assumed.
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How the Small Object Detection via Machine Learning and UAS-Based Remote-Sensing Imagery Can Support the Achievement of SDG2: A Case Study of Vole Burrows. REMOTE SENSING 2021. [DOI: 10.3390/rs13163191] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Small mammals, and particularly rodents, are common inhabitants of farmlands, where they play key roles in the ecosystem, but when overabundant, they can be major pests, able to reduce crop production and farmers’ incomes, with tangible effects on the achievement of Sustainable Development Goals no 2 (SDG2, Zero Hunger) of the United Nations. Farmers do not currently have a standardized, accurate method of detecting the presence, abundance, and locations of rodents in their fields, and hence do not have environmentally efficient methods of rodent control able to promote sustainable agriculture oriented to reduce the environmental impacts of cultivation. New developments in unmanned aerial system (UAS) platforms and sensor technology facilitate cost-effective data collection through simultaneous multimodal data collection approaches at very high spatial resolutions in environmental and agricultural contexts. Object detection from remote-sensing images has been an active research topic over the last decade. With recent increases in computational resources and data availability, deep learning-based object detection methods are beginning to play an important role in advancing remote-sensing commercial and scientific applications. However, the performance of current detectors on various UAS-based datasets, including multimodal spatial and physical datasets, remains limited in terms of small object detection. In particular, the ability to quickly detect small objects from a large observed scene (at field scale) is still an open question. In this paper, we compare the efficiencies of applying one- and two-stage detector models to a single UAS-based image and a processed (via Pix4D mapper photogrammetric program) UAS-based orthophoto product to detect rodent burrows, for agriculture/environmental applications as to support farmer activities in the achievements of SDG2. Our results indicate that the use of multimodal data from low-cost UASs within a self-training YOLOv3 model can provide relatively accurate and robust detection for small objects (mAP of 0.86 and an F1-score of 93.39%), and can deliver valuable insights for field management with high spatial precision able to reduce the environmental costs of crop production in the direction of precision agriculture management.
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Gülci S, Akay AE, Gülci N, Taş İ. An assessment of conventional and drone-based measurements for tree attributes in timber volume estimation: A case study on stone pine plantation. ECOL INFORM 2021. [DOI: 10.1016/j.ecoinf.2021.101303] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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UAV-Based and WebRTC-Based Open Universal Framework to Monitor Urban and Industrial Areas. SENSORS 2021; 21:s21124061. [PMID: 34204805 PMCID: PMC8231603 DOI: 10.3390/s21124061] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Revised: 05/30/2021] [Accepted: 06/08/2021] [Indexed: 11/18/2022]
Abstract
Nowadays, we are observing a rapid development of UAV-based monitoring systems, which are faced with more and more new tasks, such as high temporal resolution and high spatial resolution of measurements, or Artificial Intelligence on board. This paper presents the open universal framework intended for fast prototyping or building a short series of specialized flying monitoring systems able to work in urban and industrial areas. The proposed framework combines mobility of UAV with IoT measurements and full-stack WebRTC communications. WebRTC offers simultaneous transmission of both a real-time video stream and the flow of data coming from sensors, and ensures a kind of protection of data flow, which leads to preserving its near-real-time character and enables contextual communication. Addition of the AI accelerator hardware makes this system AI-ready, i.e., the IoT communication hub, which is the air component of our system, is able to perform tasks of AI-supported computing. The exemplary prototype of this system was evaluated in terms of the ability to work with fast-response sensors, the ability to work with high temporal and high spatial resolutions, video information in poor visibility conditions and AI-readiness. Results show that prototypes based on the proposed framework are able to meet the challenges of monitoring systems in smart cities and industrial areas.
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Pinto LR, Vale A, Brouwer Y, Borbinha J, Corisco J, Ventura R, Silva AM, Mourato A, Marques G, Romanets Y, Sargento S, Gonçalves B. Radiological Scouting, Monitoring and Inspection Using Drones. SENSORS 2021; 21:s21093143. [PMID: 33946574 PMCID: PMC8125498 DOI: 10.3390/s21093143] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/26/2021] [Revised: 04/26/2021] [Accepted: 04/27/2021] [Indexed: 11/22/2022]
Abstract
Human populations and natural ecosystems are bound to be exposed to ionizing radiation from the deposition of artificial radionuclides resulting from nuclear accidents, nuclear devices or radiological dispersive devices (“dirty bombs”). On the other hand, Naturally Occurring Radioactive Material industries such as phosphate production or uranium mining, contribute to the on site storage of residuals with enhanced concentrations of natural radionuclides. Therefore, in the context of the European agreements concerning nuclear energy, namely the European Atomic Energy Community Treaty, monitoring is an essential feature of the environmental radiological surveillance. In this work, we obtain 3D maps from outdoor scenarios, and complete such maps with measured radiation levels and with its radionuclide signature. In such scenarios, we face challenges such as unknown and rough terrain, limited number of sampled locations and the need for different sensors and therefore different tasks. We propose a radiological solution for scouting, monitoring and inspecting an area of interest, using a fleet of drones and a controlling ground station. First, we scout an area with a Light Detection and Ranging sensor onboard a drone to accurately 3D-map the area. Then, we monitor that area with a Geiger–Müller Counter at a low-vertical distance from the ground to produce a radiological (heat)map that is overlaid on the 3D map of the scenario. Next, we identify the hotspots of radiation, and inspect them in detail using a drone by landing on them, to reveal its radionuclide signature using a Cadmium–Zinc–Telluride detector. We present the algorithms used to implement such tasks both at the ground station and on the drones. The three mission phases were validated using actual experiments in three different outdoor scenarios. We conclude that drones can not only perform the mission efficiently, but in general they are faster and as reliable as personnel on the ground.
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Affiliation(s)
- Luís Ramos Pinto
- Insituto de Plasmas e Fusão Nuclear, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal; (A.V.); (Y.B.); (B.G.)
- Correspondence:
| | - Alberto Vale
- Insituto de Plasmas e Fusão Nuclear, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal; (A.V.); (Y.B.); (B.G.)
| | - Yoeri Brouwer
- Insituto de Plasmas e Fusão Nuclear, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal; (A.V.); (Y.B.); (B.G.)
| | - Jorge Borbinha
- Centro de Ciências e Tecnologias Nucleares, Instituto Superior Técnico, Universidade de Lisboa, Estrada Nacional 10, ao km 139,7 2695-066 Bobadela, Portugal; (J.B.); (J.C.); (Y.R.)
| | - José Corisco
- Centro de Ciências e Tecnologias Nucleares, Instituto Superior Técnico, Universidade de Lisboa, Estrada Nacional 10, ao km 139,7 2695-066 Bobadela, Portugal; (J.B.); (J.C.); (Y.R.)
| | - Rodrigo Ventura
- Institute for Systems and Robotics, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal;
| | - Ana Margarida Silva
- Instituto de Telecomunicações, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal; (A.M.S.); (A.M.); (G.M.); (S.S.)
| | - André Mourato
- Instituto de Telecomunicações, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal; (A.M.S.); (A.M.); (G.M.); (S.S.)
| | - Gonçalo Marques
- Instituto de Telecomunicações, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal; (A.M.S.); (A.M.); (G.M.); (S.S.)
| | - Yuri Romanets
- Centro de Ciências e Tecnologias Nucleares, Instituto Superior Técnico, Universidade de Lisboa, Estrada Nacional 10, ao km 139,7 2695-066 Bobadela, Portugal; (J.B.); (J.C.); (Y.R.)
| | - Susana Sargento
- Instituto de Telecomunicações, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal; (A.M.S.); (A.M.); (G.M.); (S.S.)
| | - Bruno Gonçalves
- Insituto de Plasmas e Fusão Nuclear, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001 Lisboa, Portugal; (A.V.); (Y.B.); (B.G.)
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Estimating Agricultural Soil Moisture Content through UAV-Based Hyperspectral Images in the Arid Region. REMOTE SENSING 2021. [DOI: 10.3390/rs13081562] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Unmanned aerial vehicle (UAV)-based hyperspectral remote sensing is an important monitoring technology for the soil moisture content (SMC) of agroecological systems in arid regions. This technology develops precision farming and agricultural informatization. However, hyperspectral data are generally used in data mining. In this study, UAV-based hyperspectral imaging data with a resolution o 4 cm and totaling 70 soil samples (0–10 cm) were collected from farmland (2.5 × 104 m2) near Fukang City, Xinjiang Uygur Autonomous Region, China. Four estimation strategies were tested: the original image (strategy I), first- and second-order derivative methods (strategy II), the fractional-order derivative (FOD) technique (strategy III), and the optimal fractional order combined with the optimal multiband indices (strategy IV). These strategies were based on the eXtreme Gradient Boost (XGBoost) algorithm, with the aim of building the best estimation model for agricultural SMC in arid regions. The results demonstrated that FOD technology could effectively mine information (with an absolute maximum correlation coefficient of 0.768). By comparison, strategy IV yielded the best estimates out of the methods tested (R2val = 0.921, RMSEP = 1.943, and RPD = 2.736) for the SMC. The model derived from the order of 0.4 within strategy IV worked relatively well among the different derivative methods (strategy I, II, and III). In conclusion, the combination of FOD technology and the optimal multiband indices generated a highly accurate model within the XGBoost algorithm for SMC estimation. This research provided a promising data mining approach for UAV-based hyperspectral imaging data.
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3D Reconstruction of Coastal Cliffs from Fixed-Wing and Multi-Rotor UAS: Impact of SfM-MVS Processing Parameters, Image Redundancy and Acquisition Geometry. REMOTE SENSING 2021. [DOI: 10.3390/rs13061222] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Monitoring the dynamics of coastal cliffs is fundamental for the safety of communities, buildings, utilities, and infrastructures located near the coastline. Structure-from-Motion and Multi View Stereo (SfM-MVS) photogrammetry based on Unmanned Aerial Systems (UAS) is a flexible and cost-effective surveying technique for generating a dense 3D point cloud of the whole cliff face (from bottom to top), with high spatial and temporal resolution. In this paper, in order to generate a reproducible, reliable, precise, accurate, and dense point cloud of the cliff face, a comprehensive analysis of the SfM-MVS processing parameters, image redundancy and acquisition geometry was performed. Using two different UAS, a fixed-wing and a multi-rotor, two flight missions were executed with the aim of reconstructing the geometry of an almost vertical cliff located at the central Portuguese coast. The results indicated that optimizing the processing parameters of Agisoft Metashape can improve the 3D accuracy of the point cloud up to 2 cm. Regarding the image acquisition geometry, the high off-nadir (90°) dataset taken by the multi-rotor generated a denser and more accurate point cloud, with lesser data gaps, than that generated by the low off-nadir dataset (3°) taken by the fixed wing. Yet, it was found that reducing properly the high overlap of the image dataset acquired by the multi-rotor drone permits to get an optimal image dataset, allowing to speed up the processing time without compromising the accuracy and density of the generated point cloud. The analysis and results presented in this paper improve the knowledge required for the 3D reconstruction of coastal cliffs by UAS, providing new insights into the technical aspects needed for optimizing the monitoring surveys.
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Geoinformation Technologies in Support of Environmental Hazards Monitoring under Climate Change: An Extensive Review. ISPRS INTERNATIONAL JOURNAL OF GEO-INFORMATION 2021. [DOI: 10.3390/ijgi10020094] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Human activities and climate change constitute the contemporary catalyst for natural processes and their impacts, i.e., geo-environmental hazards. Globally, natural catastrophic phenomena and hazards, such as drought, soil erosion, quantitative and qualitative degradation of groundwater, frost, flooding, sea level rise, etc., are intensified by anthropogenic factors. Thus, they present rapid increase in intensity, frequency of occurrence, spatial density, and significant spread of the areas of occurrence. The impact of these phenomena is devastating to human life and to global economies, private holdings, infrastructure, etc., while in a wider context it has a very negative effect on the social, environmental, and economic status of the affected region. Geospatial technologies including Geographic Information Systems, Remote Sensing—Earth Observation as well as related spatial data analysis tools, models, databases, contribute nowadays significantly in predicting, preventing, researching, addressing, rehabilitating, and managing these phenomena and their effects. This review attempts to mark the most devastating geo-hazards from the view of environmental monitoring, covering the state of the art in the use of geospatial technologies in that respect. It also defines the main challenge of this new era which is nothing more than the fictitious exploitation of the information produced by the environmental monitoring so that the necessary policies are taken in the direction of a sustainable future. The review highlights the potential and increasing added value of geographic information as a means to support environmental monitoring in the face of climate change. The growth in geographic information seems to be rapidly accelerated due to the technological and scientific developments that will continue with exponential progress in the years to come. Nonetheless, as it is also highlighted in this review continuous monitoring of the environment is subject to an interdisciplinary approach and contains an amount of actions that cover both the development of natural phenomena and their catastrophic effects mostly due to climate change.
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Citizen science for monitoring seasonal-scale beach erosion and behaviour with aerial drones. Sci Rep 2021; 11:3935. [PMID: 33594157 PMCID: PMC7887256 DOI: 10.1038/s41598-021-83477-6] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Accepted: 02/04/2021] [Indexed: 01/31/2023] Open
Abstract
Sandy beaches are highly dynamic systems which provide natural protection from the impact of waves to coastal communities. With coastal erosion hazards predicted to increase globally, data to inform decision making on erosion mitigation and adaptation strategies is becoming critical. However, multi-temporal topographic data over wide geographical areas is expensive and time consuming and often requires highly trained professionals. In this study we demonstrate a novel approach combining citizen science with low-cost unmanned aerial vehicles that reliably produces survey-grade morphological data able to model sediment dynamics from event to annual scales. The high-energy wave-dominated coast of south-eastern Australia, in Victoria, is used as a field laboratory to test the reliability of our protocol and develop a set of indices to study multi-scale erosional dynamics. We found that citizen scientists provide unbiased data as accurate as professional researchers. We then observed that open-ocean beaches mobilise three times as much sediment as embayed beaches and distinguished between slowed and accelerated erosional modes. The data was also able to assess the efficiency of sand nourishment for shore protection. Our citizen science protocol provides high quality monitoring capabilities, which although subject to important legislative preconditions, it is applicable in other parts of the world and transferable to other landscape systems where the understanding of sediment dynamics is critical for management of natural or anthropogenic processes.
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Effects of Differences in Structure from Motion Software on Image Processing of Unmanned Aerial Vehicle Photography and Estimation of Crown Area and Tree Height in Forests. REMOTE SENSING 2021. [DOI: 10.3390/rs13040626] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
This study examines the effects of differences in structure from motion (SfM) software on image processing of aerial images by unmanned aerial vehicles (UAV) and the resulting estimations of tree height and tree crown area. There were 20 flight conditions for the UAV aerial images, which were a combination of five conditions for flight altitude, two conditions for overlap, and two conditions for side overlap. Images were then processed using three SfM programs (Terra Mapper, PhotoScan, and Pix4Dmapper). The tree height and tree crown area were determined, and the SfM programs were compared based on the estimations. The number of densified point clouds for PhotoScan (160 × 105 to 50 × 105) was large compared to the two other two SfM programs. The estimated values of crown area and tree height by each SfM were compared via Bonferroni multiple comparisons (statistical significance level set at p < 0.05). The estimated values of canopy area showed statistically significant differences (p < 0.05) in 14 flight conditions for Terra Mapper and PhotoScan, 16 flight conditions for Terra Mapper and Pix4Dmapper, and 11 flight conditions for PhotoScan and Pix4Dmappers. In addition, the estimated values of tree height showed statistically significant differences (p < 0.05) in 15 flight conditions for Terra Mapper and PhotoScan, 19 flight conditions for Terra Mapper and Pix4Dmapper, and 20 flight conditions for PhotoScan and Pix4Dmapper. The statistically significant difference (p < 0.05) between the estimated value and measured value of each SfM was confirmed under 18 conditions for Terra Mapper, 20 conditions for PhotoScan, and 13 conditions for Pix4D. Moreover, the RMSE and rRMSE values of the estimated tree height were 5–6 m and 20–28%, respectively. Although the estimation accuracy of any SfM was low, the estimated tree height by Pix4D in many flight conditions had smaller RMSE values than the other software. As statistically significant differences were found between the SfMs in many flight conditions, we conclude that there were differences in the estimates of crown area and tree height depending on the SfM used. In addition, Pix4Dmapper is suitable for estimating forest information, such as tree height, and PhotoScan is suitable for detailed monitoring of disaster areas.
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Oldeland J, Revermann R, Luther-Mosebach J, Buttschardt T, Lehmann JRK. New tools for old problems - comparing drone- and field-based assessments of a problematic plant species. ENVIRONMENTAL MONITORING AND ASSESSMENT 2021; 193:90. [PMID: 33501565 PMCID: PMC7838141 DOI: 10.1007/s10661-021-08852-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Accepted: 01/05/2021] [Indexed: 06/12/2023]
Abstract
Plant species that negatively affect their environment by encroachment require constant management and monitoring through field surveys. Drones have been suggested to support field surveyors allowing more accurate mapping with just-in-time aerial imagery. Furthermore, object-based image analysis tools could increase the accuracy of species maps. However, only few studies compare species distribution maps resulting from traditional field surveys and object-based image analysis using drone imagery. We acquired drone imagery for a saltmarsh area (18 ha) on the Hallig Nordstrandischmoor (Germany) with patches of Elymus athericus, a tall grass which encroaches higher parts of saltmarshes. A field survey was conducted afterwards using the drone orthoimagery as a baseline. We used object-based image analysis (OBIA) to segment CIR imagery into polygons which were classified into eight land cover classes. Finally, we compared polygons of the field-based and OBIA-based maps visually and for location, area, and overlap before and after post-processing. OBIA-based classification yielded good results (kappa = 0.937) and agreed in general with the field-based maps (field = 6.29 ha, drone = 6.22 ha with E. athericus dominance). Post-processing revealed 0.31 ha of misclassified polygons, which were often related to water runnels or shadows, leaving 5.91 ha of E. athericus cover. Overlap of both polygon maps was only 70% resulting from many small patches identified where E. athericus was absent. In sum, drones can greatly support field surveys in monitoring of plant species by allowing for accurate species maps and just-in-time captured very-high-resolution imagery.
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Affiliation(s)
- Jens Oldeland
- Insitute of Plant Sciences and Microbiology, University of Hamburg, Ohnhorststr. 18, 22609, Hamburg, Germany.
- Netzwerk für Angewandte Ökologie, Hamburg, Germany.
| | | | | | | | - Jan R K Lehmann
- Institute of Landscape Ecology, University of Münster, Münster, Germany
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High-Resolution Mapping of Tile Drainage in Agricultural Fields Using Unmanned Aerial System (UAS)-Based Radiometric Thermal and Optical Sensors. HYDROLOGY 2020. [DOI: 10.3390/hydrology8010002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
With the growing concerns of water quality related to tile drainage in agricultural lands, developing an efficient and cost-effective method of mapping tile drainage is essential. This research aimed to establish mapping of tile drainage systems in agricultural fields using optical and radiometric thermal sensors mounted on Unmanned Aerial System (UAS). The overarching hypothesis is that in a tile-drained land, spatial distribution of soil water content is affected by tile lines, therefore, contrasting soil temperature signals exist between areas along the tile lines and between the tile lines. Designated flights were conducted to assess the effectiveness of the UAS under various conditions such as rainfall, crop cover, crop maturity and time of the day. Image correction, mosaicking, image enhancements and map production were conducted using Agisoft and ENVI image analysis software. The results showed intermediate growth stage of soybean plants and rainfall helped delineating tile lines. In-situ soil temperature measurements revealed appropriate time of the day (14:00 to 18:00 h) for thermal image detection of the tile lines. The role of soil moisture and plant cover is not resolved, thus, further refinement of the approach considering these factors is necessary to develop efficient mapping techniques of tile drainage using UAS thermal and optical sensors.
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Andriolo U, Gonçalves G, Sobral P, Fontán-Bouzas Á, Bessa F. Beach-dune morphodynamics and marine macro-litter abundance: An integrated approach with Unmanned Aerial System. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 749:141474. [PMID: 32846347 DOI: 10.1016/j.scitotenv.2020.141474] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 07/30/2020] [Accepted: 08/02/2020] [Indexed: 06/11/2023]
Abstract
This work shows an integrated approach for coastal environmental monitoring, which aimed to understand the relation between beach-dune morphodynamics, marine litter abundance and environmental forcing. Three unmanned aerial system (UAS) flights were deployed on a beach-dune system at the Atlantic Portuguese coast to assess two main goals: (i) quantifying the morphological changes that occurred among flights, with focus on dune erosion, and (ii) mapping the changes of marine macro-litter abundance on the shore. Two most vulnerable-to-erosion sectors of the beach were identified. In the northern sector, the groin affected the downdrift shoreline, with dune erosion of about 1 m. In the central part of the beach, the dunes recessed about 4 m during the winter, being more exposed to environmental forcing due to the absence of dune vegetation. Marine litter occupation area on the beach decreased from 25% to 20% over the winter, with octopus pots (13%) and fragments (69%) being the most abundant items on average. Litter distribution varied in relation to swash elevation, wind speed and direction. With low swash elevation, the wind played a predominant role in moving the stranded items northwards, whereas high swash elevation concentrated the items at the dune foot. This study emphasizes the potential of UAS in allowing an integrated approach for coastal erosion monitoring and marine litter mapping, and set the ground for marine litter dynamic modelling on the shore.
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Affiliation(s)
- Umberto Andriolo
- INESC-Coimbra, Department of Electrical and Computer Engineering, Coimbra, Portugal.
| | - Gil Gonçalves
- INESC-Coimbra, Department of Electrical and Computer Engineering, Coimbra, Portugal; University of Coimbra, Department of Mathematics, Coimbra, Portugal.
| | - Paula Sobral
- MARE - Marine and Environmental Sciences Centre, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal.
| | - Ángela Fontán-Bouzas
- Centro de Investigación Mariña, University of Vigo, GEOMA, Campus de Vigo, As Lagoas, Marcosende, 36310 Vigo, Spain; Physics Department & Centre of Environmental and Marine Studies, University of Aveiro, Portugal.
| | - Filipa Bessa
- University of Coimbra, MARE - Marine and Environmental Sciences Centre, Department of Life Sciences, 3000-456 Coimbra, Portugal.
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Denham ME, Amidon MB, Wainwright HM, Dafflon B, Ajo-Franklin J, Eddy-Dilek CA. Improving Long-term Monitoring of Contaminated Groundwater at Sites where Attenuation-based Remedies are Deployed. ENVIRONMENTAL MANAGEMENT 2020; 66:1142-1161. [PMID: 33098454 DOI: 10.1007/s00267-020-01376-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Accepted: 10/05/2020] [Indexed: 06/11/2023]
Abstract
This study presents an effective approach to tackle the challenge of long-term monitoring of contaminated groundwater sites where remediation leaves residual contamination in the subsurface. Traditional long-term monitoring of contaminated groundwater sites focuses on measuring contaminant concentrations and is applicable to sites where contaminant mass is removed or degraded to a level below the regulatory standard. The traditional approach is less effective at sites where risk from metals or radionuclides continues to exist in the subsurface after remedial goals are achieved. We propose a long-term monitoring strategy for this type of waste site that focuses on measuring the hydrological and geochemical parameters that control attenuation or remobilization of contaminants while de-emphasizing contaminant-concentration measurements. We demonstrate how this approach would be more effective than traditional long-term monitoring, using a site in South Carolina, USA, where groundwater is contaminated by several radionuclides. A comprehensive enhanced attenuation remedy has been implemented at the site to minimize discharge of contamination to surface water. The immobilization of contaminants occurs in three locations by manipulation of hydrological and geochemical parameters, as well as by natural attenuation processes. Deployment of our proposed long-term monitoring strategy will combine subsurface and surface measurements using spectroscopic tools, geophysical tools, and sensors to monitor the parameters controlling contaminant attenuation. The advantage of this approach is that it will detect the potential for contaminant remobilization from engineered and natural attenuation zones, allowing potential adverse changes to be mitigated before contaminant attenuation is reversed.
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Affiliation(s)
- Miles E Denham
- Panoramic Environmental Consulting, LLC, Aiken, SC, USA.
| | | | | | | | - Jonathan Ajo-Franklin
- Lawrence Berkeley National Laboratory, Berkeley, CA, USA
- Rice University, Houston, TX, USA
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Quality Assessment of Photogrammetric Methods—A Workflow for Reproducible UAS Orthomosaics. REMOTE SENSING 2020. [DOI: 10.3390/rs12223831] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Unmanned aerial systems (UAS) are cost-effective, flexible and offer a wide range of applications. If equipped with optical sensors, orthophotos with very high spatial resolution can be retrieved using photogrammetric processing. The use of these images in multi-temporal analysis and the combination with spatial data imposes high demands on their spatial accuracy. This georeferencing accuracy of UAS orthomosaics is generally expressed as the checkpoint error. However, the checkpoint error alone gives no information about the reproducibility of the photogrammetrical compilation of orthomosaics. This study optimizes the geolocation of UAS orthomosaics time series and evaluates their reproducibility. A correlation analysis of repeatedly computed orthomosaics with identical parameters revealed a reproducibility of 99% in a grassland and 75% in a forest area. Between time steps, the corresponding positional errors of digitized objects lie between 0.07 m in the grassland and 0.3 m in the forest canopy. The novel methods were integrated into a processing workflow to enhance the traceability and increase the quality of UAS remote sensing.
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UAV-Derived Data Application for Environmental Monitoring of the Coastal Area of Lake Sevan, Armenia with a Changing Water Level. REMOTE SENSING 2020. [DOI: 10.3390/rs12223821] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The paper presents the range and applications of thematic tasks for ultra-high spatial resolution data from small unmanned aerial vehicles (UAVs) in the integral system of environmental multi-platform and multi-scaled monitoring of Lake Sevan, which is one of the greatest freshwater lakes in Eurasia. From the 1930s, it had been subjected to human-driven changing of the water level with associated and currently exacerbated environmental issues. We elaborated the specific techniques of optical and thermal surveys for the different coastal sites and phenomena in study. UAV-derived optical imagery and thermal stream were processed by a Structure-from-Motion algorithm to create digital surface models (DSMs) and ortho-imagery for several key sites. UAV imagery were used as additional sources of detailed spatial data under large-scale mapping of current land-use and point sources of water pollution in the coastal zone, and a main data source on environmental violations, especially sewage discharge or illegal landfills. The revealed present-day coastal types were mapped at a large scale, and the net changes of shoreline position and rates of shore erosion were calculated on multi-temporal UAV data using modified Hausdorff’s distance. Based on highly-detailed DSMs, we revealed the areas and objects at risk of flooding under the projected water level rise to 1903.5 m along the west coasts of Minor Sevan being the most popular recreational area. We indicated that the structural and environmental state of marsh coasts and coastal wetlands as potential sources of lake eutrophication and associated algal blooms could be more efficiently studied under thermal UAV surveys than optical ones. We proposed to consider UAV surveys as a necessary intermediary between ground data and satellite imagery with different spatial resolutions for the complex environmental monitoring of the coastal area and water body of Lake Sevan as a whole.
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Meta-analysis of Unmanned Aerial Vehicle (UAV) Imagery for Agro-environmental Monitoring Using Machine Learning and Statistical Models. REMOTE SENSING 2020. [DOI: 10.3390/rs12213511] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Unmanned Aerial Vehicle (UAV) imaging systems have recently gained significant attention from researchers and practitioners as a cost-effective means for agro-environmental applications. In particular, machine learning algorithms have been applied to UAV-based remote sensing data for enhancing the UAV capabilities of various applications. This systematic review was performed on studies through a statistical meta-analysis of UAV applications along with machine learning algorithms in agro-environmental monitoring. For this purpose, a total number of 163 peer-reviewed articles published in 13 high-impact remote sensing journals over the past 20 years were reviewed focusing on several features, including study area, application, sensor type, platform type, and spatial resolution. The meta-analysis revealed that 62% and 38% of the studies applied regression and classification models, respectively. Visible sensor technology was the most frequently used sensor with the highest overall accuracy among classification articles. Regarding regression models, linear regression and random forest were the most frequently applied models in UAV remote sensing imagery processing. Finally, the results of this study confirm that applying machine learning approaches on UAV imagery produces fast and reliable results. Agriculture, forestry, and grassland mapping were found as the top three UAV applications in this review, in 42%, 22%, and 8% of the studies, respectively.
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Methodology of Processing Single-Strip Blocks of Imagery with Reduction and Optimization Number of Ground Control Points in UAV Photogrammetry. REMOTE SENSING 2020. [DOI: 10.3390/rs12203336] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Unmanned aerial vehicle (UAV) systems are often used to collect high-resolution imagery. Data obtained from UAVs are now widely used for both military and civilian purposes. This article discusses the issues related to the use of UAVs for the imaging of restricted areas. Two methods of developing single-strip blocks with the optimal number of ground control points are presented. The proposed methodology is based on a modified linear regression model and an empirically modified Levenberg–Marquardt–Powell algorithm. The effectiveness of the proposed methods of adjusting a single-strip block were verified based on several test sets. For method I, the mean square errors (RMSE) values for the X, Y, Z coordinates of the control points were within the range of 0.03–0.13 m/0.08–0.09 m, and for the second method, 0.03–0.04 m/0.06–0.07 m. For independent control points, the RMSE values were 0.07–0.12 m/0.06–0.07 m for the first method and 0.07–0.12 m/0.07–0.09 m for the second method. The results of the single-strip block adjustment showed that the use of the modified Levenberg–Marquardt–Powell method improved the adjustment accuracy by 13% and 16%, respectively.
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UAV-Based Terrain Modeling under Vegetation in the Chinese Loess Plateau: A Deep Learning and Terrain Correction Ensemble Framework. REMOTE SENSING 2020. [DOI: 10.3390/rs12203318] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Accurate topographic mapping is a critical task for various environmental applications because elevation affects hydrodynamics and vegetation distributions. UAV photogrammetry is popular in terrain modelling because of its lower cost compared to laser scanning. However, this method is restricted in vegetation area with a complex terrain, due to reduced ground visibility and lack of robust and automatic filtering algorithms. To solve this problem, this work proposed an ensemble method of deep learning and terrain correction. First, image matching point cloud was generated by UAV photogrammetry. Second, vegetation points were identified based on U-net deep learning network. After that, ground elevation was corrected by estimating vegetation height to generate the digital terrain model (DTM). Two scenarios, namely, discrete and continuous vegetation areas were considered. The vegetation points in the discrete area were directly removed and then interpolated, and terrain correction was applied for the points in the continuous areas. Case studies were conducted in three different landforms in the loess plateau of China, and accuracy assessment indicated that the overall accuracy of vegetation detection was 95.0%, and the MSE (Mean Square Error) of final DTM (Digital Terrain Model) was 0.024 m.
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