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Russo NJ, Davies AB, Blakey RV, Ordway EM, Smith TB. Feedback loops between 3D vegetation structure and ecological functions of animals. Ecol Lett 2023; 26:1597-1613. [PMID: 37419868 DOI: 10.1111/ele.14272] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 05/09/2023] [Accepted: 05/16/2023] [Indexed: 07/09/2023]
Abstract
Ecosystems function in a series of feedback loops that can change or maintain vegetation structure. Vegetation structure influences the ecological niche space available to animals, shaping many aspects of behaviour and reproduction. In turn, animals perform ecological functions that shape vegetation structure. However, most studies concerning three-dimensional vegetation structure and animal ecology consider only a single direction of this relationship. Here, we review these separate lines of research and integrate them into a unified concept that describes a feedback mechanism. We also show how remote sensing and animal tracking technologies are now available at the global scale to describe feedback loops and their consequences for ecosystem functioning. An improved understanding of how animals interact with vegetation structure in feedback loops is needed to conserve ecosystems that face major disruptions in response to climate and land-use change.
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Affiliation(s)
- Nicholas J Russo
- Department of Ecology and Evolutionary Biology, University of California Los Angeles, Los Angeles, California, USA
| | - Andrew B Davies
- Department of Organismic & Evolutionary Biology, Harvard University, Cambridge, Massachusetts, USA
| | - Rachel V Blakey
- La Kretz Center for California Conservation Science, Institute of the Environment and Sustainability, University of California Los Angeles, Los Angeles, California, USA
- Biological Sciences Department, California State Polytechnic University, Pomona, California, USA
| | - Elsa M Ordway
- Department of Ecology and Evolutionary Biology, University of California Los Angeles, Los Angeles, California, USA
- La Kretz Center for California Conservation Science, Institute of the Environment and Sustainability, University of California Los Angeles, Los Angeles, California, USA
| | - Thomas B Smith
- Department of Ecology and Evolutionary Biology, University of California Los Angeles, Los Angeles, California, USA
- La Kretz Center for California Conservation Science, Institute of the Environment and Sustainability, University of California Los Angeles, Los Angeles, California, USA
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2
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Bergamo TF, de Lima RS, Kull T, Ward RD, Sepp K, Villoslada M. From UAV to PlanetScope: Upscaling fractional cover of an invasive species Rosa rugosa. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 336:117693. [PMID: 36913856 DOI: 10.1016/j.jenvman.2023.117693] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 02/28/2023] [Accepted: 03/06/2023] [Indexed: 06/18/2023]
Abstract
Invasive plant species pose a direct threat to biodiversity and ecosystem services. Among these, Rosa rugosa has had a severe impact on Baltic coastal ecosystems in recent decades. Accurate mapping and monitoring tools are essential to quantify the location and spatial extent of invasive plant species to support eradication programs. In this paper we combined RGB images obtained using an Unoccupied Aerial Vehicle, with multispectral PlanetScope images to map the extent of R. rugosa at seven locations along the Estonian coastline. We used RGB-based vegetation indices and 3D canopy metrics in combination with a random forest algorithm to map R. rugosa thickets, obtaining high mapping accuracies (Sensitivity = 0.92, specificity = 0.96). We then used the R. rugosa presence/absence maps as a training dataset to predict the fractional cover based on multispectral vegetation indices derived from the PlanetScope constellation and an Extreme Gradient Boosting algorithm (XGBoost). The XGBoost algorithm yielded high fractional cover prediction accuracies (RMSE = 0.11, R2 = 0.70). An in-depth accuracy assessment based on site-specific validations revealed notable differences in accuracy between study sites (highest R2 = 0.74, lowest R2 = 0.03). We attribute these differences to the various stages of R. rugosa invasion and the density of thickets. In conclusion, the combination of RGB UAV images and multispectral PlanetScope images is a cost-effective method to map R. rugosa in highly heterogeneous coastal ecosystems. We propose this approach as a valuable tool to extend the highly local geographical scope of UAV assessments into wider areas and regional evaluations.
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Affiliation(s)
- Thaísa F Bergamo
- Institute of Agriculture and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 5, EE-51006, Tartu, Estonia; Department of Geographical and Historical Studies, University of Eastern Finland, P.O. Box 111, FI-80101, Joensuu, Finland.
| | - Raul Sampaio de Lima
- Institute of Agriculture and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 5, EE-51006, Tartu, Estonia
| | - Tiiu Kull
- Institute of Agriculture and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 5, EE-51006, Tartu, Estonia
| | - Raymond D Ward
- Institute of Agriculture and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 5, EE-51006, Tartu, Estonia; Centre for Aquatic Environments, School of the Environment and Technology, University of Brighton, Cockcroft Building, Moulsecoomb, Brighton, BN2 4GJ, UK
| | - Kalev Sepp
- Institute of Agriculture and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 5, EE-51006, Tartu, Estonia
| | - Miguel Villoslada
- Institute of Agriculture and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi 5, EE-51006, Tartu, Estonia; Department of Geographical and Historical Studies, University of Eastern Finland, P.O. Box 111, FI-80101, Joensuu, Finland
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An Overview of the Applications of Earth Observation Satellite Data: Impacts and Future Trends. REMOTE SENSING 2022. [DOI: 10.3390/rs14081863] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
As satellite observation technology develops and the number of Earth observation (EO) satellites increases, satellite observations have become essential to developments in the understanding of the Earth and its environment. However, the current impacts to the remote sensing community of different EO satellite data and possible future trends of EO satellite data applications have not been systematically examined. In this paper, we review the impacts of and future trends in the use of EO satellite data based on an analysis of data from 15 EO satellites whose data are widely used. Articles that reference EO satellite missions included in the Web of Science core collection for 2020 were analyzed using scientometric analysis and meta-analysis. We found the following: (1) the number of publications and citations referencing EO satellites is increasing exponentially; however, the number of articles referencing AVHRR, SPOT, and TerraSAR is tending to decrease; (2) papers related to EO satellites are concentrated in a small number of journals: 43.79% of the articles that were reviewed were published in only 13 journals; and (3) remote sensing impact factor (RSIF), a new impact index, was constructed to measure the impacts of EO satellites and to predict future trends in applications of their data. Landsat, Sentinel, MODIS, Gaofen, and WorldView were found to be the most significant current EO satellite missions and MODIS data to have the widest range of applications. Over the next five years (2021–2025), it is expected that Sentinel will become the satellite mission with the greatest influence.
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The Suitability of PlanetScope Imagery for Mapping Rubber Plantations. REMOTE SENSING 2022. [DOI: 10.3390/rs14051061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
Abstract
Quickly and accurately understanding the spatial distribution of regional rubber resources is of great practical significance. Using the unique phenological characteristics of rubber trees derived from remotely sensed data is a common effective method for monitoring rubber trees. However, due to the lack of high-quality images available during the key phenological period, it is still very difficult to apply this method in practical applications. PlanetScope data with high temporal (daily) resolution have great advantages in acquiring high-quality images, but these images have not been previously used to monitor rubber plantations. In this paper, multitemporal PlanetScope images were used as data sources, and the spectral features, index features, first principal components, and textural features of the images were comprehensively utilized. Four classification methods, including a pixel-based random forest (RF) approach, pixel-based support vector machine (SVM) approach, object-oriented RF approach and object-oriented SVM approach, were utilized to discuss the feasibility of using PlanetScope data to monitor rubber forests. The results showed that the optimal time window for monitoring rubber forests in the study area spanned from the 49th day to the 65th day of 2019 according to the MODIS-NDVI analysis. The contribution rate of the difference in the modified simple ratio (dMSR) feature was largest among all considered features for all pixel-based and object-oriented methods. The object-oriented RF/SVM classification method achieved the best classification results with an overall accuracy of 93.87% and a Kappa index of agreement (KIA) of 0.92. The highest producer’s accuracy and user’s accuracy obtained with this method were 95.18% for rubber plantations. The results of this study show that it is feasible to use PlanetScope data to perform rubber monitoring, thus effectively solving the problem of missing images in the optimal rubber monitoring period; additionally, this method can be extended to other real-life applications.
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A Technical Review of Planet Smallsat Data: Practical Considerations for Processing and Using PlanetScope Imagery. REMOTE SENSING 2021. [DOI: 10.3390/rs13193930] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
With the ability to capture daily imagery of Earth at very high spatial resolutions, commercial smallsats are emerging as a key resource for the remote sensing community. Planet (Planet Labs, Inc., San Francisco, CA, USA) operates the largest constellation of Earth imaging smallsats, which have been capturing multispectral imagery for consumer use since 2016. Use of these images is growing in the remote sensing community, but the variation in radiometric and geometric quality compared to traditional platforms (i.e., Landsat, MODIS, etc.) means the images are not always ‘analysis ready’ upon download. Neglecting these variations can impact derived products and analyses. Users also must contend with constantly evolving technology, which improves products but can create discrepancies across sensor generations. This communication provides a technical review of Planet’s PlanetScope smallsat data streams and extant literature to provide practical considerations to the remote sensing community for utilizing these images in remote sensing research. Radiometric and geometric issues for researchers to consider are highlighted alongside a review of processing completed by Planet and innovations being developed by the user community to foster the adoption and use of these images for scientific applications.
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Prediction of Forest Aboveground Biomass Using Multitemporal Multispectral Remote Sensing Data. REMOTE SENSING 2021. [DOI: 10.3390/rs13071282] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Forest aboveground biomass (AGB) is a prime forest parameter that requires global level estimates to study the global carbon cycle. Light detection and ranging (LiDAR) is the state-of-the-art technology for AGB prediction but it is expensive, and its coverage is restricted to small areas. On the contrary, spaceborne Earth observation data are effective and economical information sources to estimate and monitor AGB at a large scale. In this paper, we present a study on the use of different spaceborne multispectral remote sensing data for the prediction of forest AGB. The objective is to evaluate the effects of temporal, spectral, and spatial capacities of multispectral satellite data for AGB prediction. The study was performed on multispectral data acquired by Sentinel-2, RapidEye, and Dove satellites which are characterized by different spatial resolutions, temporal availability, and number of spectral bands. A systematic process of least absolute shrinkage and selection operator (lasso) variable selection generalized linear modeling, leave-one-out cross-validation, and analysis was accomplished on each satellite dataset for AGB prediction. Results point out that the multitemporal data based AGB models were more effective in prediction than the single-time models. In addition, red-edge and short wave infrared (SWIR) channel dependent variables showed significant improvement in the modeling results and contributed to more than 50% of the selected variables. Results also suggest that high spatial resolution plays a smaller role than spectral and temporal information in the prediction of AGB. The overall analysis emphasizes a good potential of spaceborne multispectral data for developing sophisticated methods for AGB prediction especially with specific spectral channels and temporal information.
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Csillik O, Asner GP. Near-real time aboveground carbon emissions in Peru. PLoS One 2020; 15:e0241418. [PMID: 33137140 PMCID: PMC7605693 DOI: 10.1371/journal.pone.0241418] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2020] [Accepted: 10/15/2020] [Indexed: 11/24/2022] Open
Abstract
Monitoring aboveground carbon stocks and fluxes from tropical deforestation and forest degradation is important for mitigating climate change and improving forest management. However, high temporal and spatial resolution analyses are rare. This study presents the most detailed tracking of aboveground carbon over time, with yearly, quarterly and monthly estimations of emissions using the stock-difference approach and masked by the forest loss layer of Global Forest Watch. We generated high spatial resolution (1-ha) monitoring of aboveground carbon density (ACD) and emissions (ACE) in Peru by incorporating hundreds of thousands of Planet Dove satellite images, Sentinel-1 radar, topography and airborne LiDAR, embedded into a deep learning regression workflow using high-performance computing. Consistent ACD results were obtained for all quarters and months analyzed, with R2 values of 0.75–0.78, and root mean square errors (RMSE) between 20.6 and 22.0 Mg C ha-1. A total of 7.138 Pg C was estimated for Peru with annual ACE of 20.08 Tg C between the third quarters of 2017 and 2018, respectively, or 23.4% higher than estimates from the FAO Global Forest Resources Assessment. Analyzed quarterly, the spatial evolution of ACE revealed 11.5 Tg C, 6.6 Tg C, 8.6 Tg C, and 10.1 Tg C lost between the third quarters of 2017 and 2018. Moreover, our monthly analysis for the dry season reveals the evolution of ACE at unprecedented temporal detail. We discuss environmental controls over ACE and provide a spatially explicit tool for enhanced forest carbon management at scale.
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Affiliation(s)
- Ovidiu Csillik
- Center for Global Discovery and Conservation Science, Arizona State University, Tempe, Arizona, United States of America
- * E-mail:
| | - Gregory P. Asner
- Center for Global Discovery and Conservation Science, Arizona State University, Tempe, Arizona, United States of America
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Monitoring Pasture Aboveground Biomass and Canopy Height in an Integrated Crop–Livestock System Using Textural Information from PlanetScope Imagery. REMOTE SENSING 2020. [DOI: 10.3390/rs12162534] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Fast and accurate quantification of the available pasture biomass is essential to support grazing management decisions in intensively managed fields. The increasing temporal and spatial resolutions offered by the new generation of orbital platforms, such as Planet CubeSat satellites, have improved the capability of monitoring pasture biomass using remotely sensed data. Here, we assessed the feasibility of using spectral and textural information derived from PlanetScope imagery for estimating pasture aboveground biomass (AGB) and canopy height (CH) in intensively managed fields and the potential for enhanced accuracy by applying the extreme gradient boosting (XGBoost) algorithm. Our results demonstrated that the texture measures enhanced AGB and CH estimations compared to the performance obtained using only spectral bands or vegetation indices. The best results were found by employing the XGBoost models based only on texture measures. These models achieved moderately high accuracy to predict pasture AGB and CH, explaining 65% and 89% of AGB (root mean square error (RMSE) = 26.52%) and CH (RMSE = 20.94%) variability, respectively. This study demonstrated the potential of using texture measures to improve the prediction accuracy of AGB and CH models based on high spatiotemporal resolution PlanetScope data in intensively managed mixed pastures.
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Comparison of Multi-Temporal PlanetScope Data with Landsat 8 and Sentinel-2 Data for Estimating Airborne LiDAR Derived Canopy Height in Temperate Forests. REMOTE SENSING 2020. [DOI: 10.3390/rs12111876] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Developing accurate methods for estimating forest structures is essential for efficient forest management. The high spatial and temporal resolution data acquired by CubeSat satellites have desirable characteristics for mapping large-scale forest structural attributes. However, most studies have used a median composite or single image for analyses. The multi-temporal use of CubeSat data may improve prediction accuracy. This study evaluates the capabilities of PlanetScope CubeSat data to estimate canopy height derived from airborne Light Detection and Ranging (LiDAR) by comparing estimates using Sentinel-2 and Landsat 8 data. Random forest (RF) models using a single composite, multi-seasonal composites, and time-series data were investigated at different spatial resolutions of 3, 10, 20, and 30 m. The highest prediction accuracy was obtained by the PlanetScope multi-seasonal composites at 3 m (relative root mean squared error: 51.3%) and Sentinel-2 multi-seasonal composites at the other spatial resolutions (40.5%, 35.2%, and 34.2% for 10, 20, and 30 m, respectively). The results show that RF models using multi-seasonal composites are 1.4% more accurate than those using harmonic metrics from time-series data in the median. PlanetScope is recommended for canopy height mapping at finer spatial resolutions. However, the unique characteristics of PlanetScope data in a spatial and temporal context should be further investigated for operational forest monitoring.
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