1
|
Ma TT, Chang Z, Zhang N, Xu H. Application of electronic nose technology in the diagnosis of gastrointestinal diseases: a review. J Cancer Res Clin Oncol 2024; 150:401. [PMID: 39192027 PMCID: PMC11349790 DOI: 10.1007/s00432-024-05925-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2024] [Accepted: 08/14/2024] [Indexed: 08/29/2024]
Abstract
Electronic noses (eNoses) are electronic bionic olfactory systems that use sensor arrays to produce response patterns to different odors, thereby enabling the identification of various scents. Gastrointestinal diseases have a high incidence rate and occur in 9 out of 10 people in China. Gastrointestinal diseases are characterized by a long course of symptoms and are associated with treatment difficulties and recurrence. This review offers a comprehensive overview of volatile organic compounds, with a specific emphasis on those detected via the eNose system. Furthermore, this review describes the application of bionic eNose technology in the diagnosis and screening of gastrointestinal diseases based on recent local and international research progress and advancements. Moreover, the prospects of bionic eNose technology in the field of gastrointestinal disease diagnostics are discussed.
Collapse
Affiliation(s)
- Tan-Tan Ma
- Department of Gastroenterology, The First Hospital of Jilin University, 71 Xinmin Street, Changchun, 130021, China
| | - Zhiyong Chang
- Key Laboratory of Bionic Engineering, Ministry of Education, Jilin University, Changchun, 130022, China
| | - Nan Zhang
- Department of Gastroenterology, The First Hospital of Jilin University, 71 Xinmin Street, Changchun, 130021, China.
| | - Hong Xu
- Department of Gastroenterology, The First Hospital of Jilin University, 71 Xinmin Street, Changchun, 130021, China.
| |
Collapse
|
2
|
Capuano R, Ciotti M, Catini A, Bernardini S, Di Natale C. Clinical applications of volatilomic assays. Crit Rev Clin Lab Sci 2024:1-20. [PMID: 39129534 DOI: 10.1080/10408363.2024.2387038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Revised: 04/23/2024] [Accepted: 07/29/2024] [Indexed: 08/13/2024]
Abstract
The study of metabolomics is revealing immense potential for diagnosis, therapy monitoring, and understanding of pathogenesis processes. Volatilomics is a subcategory of metabolomics interested in the detection of molecules that are small enough to be released in the gas phase. Volatile compounds produced by cellular processes are released into the blood and lymph, and can reach the external environment through different pathways, such as the blood-air interface in the lung that are detected in breath, or the blood-water interface in the kidney that leads to volatile compounds detected in urine. Besides breath and urine, additional sources of volatile compounds such as saliva, blood, feces, and skin are available. Volatilomics traces its roots back over fifty years to the pioneering investigations in the 1970s. Despite extensive research, the field remains in its infancy, hindered by a lack of standardization despite ample experimental evidence. The proliferation of analytical instrumentations, sample preparations and methods of volatilome sampling still make it difficult to compare results from different studies and to establish a common standard approach to volatilomics. This review aims to provide an overview of volatilomics' diagnostic potential, focusing on two key technical aspects: sampling and analysis. Sampling poses a challenge due to the susceptibility of human samples to contamination and confounding factors from various sources like the environment and lifestyle. The discussion then delves into targeted and untargeted approaches in volatilomics. Some case studies are presented to exemplify the results obtained so far. Finally, the review concludes with a discussion on the necessary steps to fully integrate volatilomics into clinical practice.
Collapse
Affiliation(s)
- Rosamaria Capuano
- Department of Electronic Engineering, University of Rome Tor Vergata, Roma, Italy
- Interdepartmental Center for Volatilomics, "A. D'Amico", University of Rome Tor Vergata, Rome, Italy
| | - Marco Ciotti
- Department of Laboratory Medicine, University Hospital Tor Vergata, Rome, Italy
| | - Alexandro Catini
- Department of Electronic Engineering, University of Rome Tor Vergata, Roma, Italy
- Interdepartmental Center for Volatilomics, "A. D'Amico", University of Rome Tor Vergata, Rome, Italy
| | - Sergio Bernardini
- Interdepartmental Center for Volatilomics, "A. D'Amico", University of Rome Tor Vergata, Rome, Italy
- Department of Laboratory Medicine, University Hospital Tor Vergata, Rome, Italy
- Department of Experimental Medicine, University of Rome Tor Vergata, Rome, Italy
| | - Corrado Di Natale
- Department of Electronic Engineering, University of Rome Tor Vergata, Roma, Italy
- Interdepartmental Center for Volatilomics, "A. D'Amico", University of Rome Tor Vergata, Rome, Italy
| |
Collapse
|
3
|
Golyak IS, Anfimov DR, Demkin PP, Berezhanskiy PV, Nebritova OA, Morozov AN, Fufurin IL. A hybrid learning approach to better classify exhaled breath's infrared spectra: A noninvasive optical diagnosis for socially significant diseases. JOURNAL OF BIOPHOTONICS 2024:e202400151. [PMID: 39075328 DOI: 10.1002/jbio.202400151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Revised: 07/05/2024] [Accepted: 07/15/2024] [Indexed: 07/31/2024]
Abstract
Early diagnosis is crucial for effective treatment of socially significant diseases, such as type 1 diabetes mellitus (T1DM), pneumonia, and asthma. This study employs a diagnostic method based on infrared laser spectroscopy of human exhaled breath. The experimental setup comprises a quantum cascade laser, which emits in a pulsed mode with a peak power of up to 150 mW in the spectral range of 5.3-12.8 μm (780-1890 cm-1), and a Herriott multipass gas cell with a specific optical path length of 76 m. Using this setup, spectra of exhaled breath in the mid-infrared range were obtained from 165 volunteers, including healthy individuals, patients with T1DM, asthma, and pneumonia. The study proposes a hybrid approach for classifying these spectra, utilizing a variational autoencoder for dimensionality reduction and a support vector machine method for classification. The results demonstrate that the proposed hybrid approach outperforms other machine learning method combinations.
Collapse
|
4
|
Wang C, Jiang Y, Peng Y, Huo J, Zhang B. Facile Preparation of TiO 2NTs/Au@MOF Nanocomposites for High-Sensitivity SERS Sensing of Gaseous VOC. SENSORS (BASEL, SWITZERLAND) 2024; 24:4447. [PMID: 39065845 PMCID: PMC11280918 DOI: 10.3390/s24144447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2024] [Revised: 06/27/2024] [Accepted: 06/29/2024] [Indexed: 07/28/2024]
Abstract
Surface-enhanced Raman spectroscopy (SERS) is a promising and highly sensitive molecular fingerprint detection technology. However, the development of SERS nanocomposites that are label-free, highly sensitive, selective, stable, and reusable for gaseous volatile organic compounds (VOCs) detection remains a challenge. Here, we report a novel TiO2NTs/AuNPs@ZIF-8 nanocomposite for the ultrasensitive SERS detection of VOCs. The three-dimensional TiO2 nanotube structure with a large specific surface area provides abundant sites for the loading of Au NPs, which possess excellent local surface plasmon resonance (LSPR) effects, further leading to the formation of a large number of SERS active hotspots. The externally wrapped porous MOF structure adsorbs more gaseous VOC molecules onto the noble metal surface. Under the synergistic mechanism of physical and chemical enhancement, a better SERS enhancement effect can be achieved. By optimizing experimental conditions, the SERS detection limit for acetophenone, a common exhaled VOC, is as low as 10-11 M. And the relative standard deviation of SERS signal intensity from different points on the same nanocomposite surface is 4.7%. The acetophenone gas achieves a 1 min response and the signal reaches stability in 4 min. Under UV irradiation, the surface-adsorbed acetophenone can be completely degraded within 40 min. The experimental results demonstrate that this nanocomposite has good detection sensitivity, repeatability, selectivity, response speed, and reusability, making it a promising sensor for gaseous VOCs.
Collapse
Affiliation(s)
- Chunyan Wang
- Chongqing University Cancer Hospital, Chongqing 400044, China
- College of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China
| | - Yina Jiang
- College of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China
| | - Yuyu Peng
- College of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China
| | - Jia Huo
- Chongqing DeWen ZhiShang Education Technology Co., Ltd., Chongqing 400042, China
| | - Ban Zhang
- College of Economics, Mongolian University of Life Sciences, Ulaanbaatar 17024, Mongolia
| |
Collapse
|
5
|
Selvaraj B, Rajasekar E, Balaguru Rayappan JB. Machine Learning Approaches: Detecting the Disease Variants in Human-Exhaled Breath Biomarkers. ACS OMEGA 2024; 9:215-226. [PMID: 38222575 PMCID: PMC10785631 DOI: 10.1021/acsomega.3c03755] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Revised: 12/06/2023] [Accepted: 12/11/2023] [Indexed: 01/16/2024]
Abstract
In recent days, the development of sensor-based medical devices has been found to be very effective for the prediction and analysis of the onset of diseases. The instigation of an electronic nose (eNose) device is profound and very useful in diverse applications. The analysis of exhaled breath biomarkers using eNose sensors has attained wider attention among researchers, and the prediction of multiple disease variants using the same is still an open research problem. In this work, an enhanced XGBooster classifier-based prediction mechanism was introduced to identify the disease variants based on the responses of commercially available metal oxide-based Figaro (Japan) sensors including TGS826, TGS822, TGS2600, and TGS2602. The implemented model secured 98.36% prediction accuracy in multiclass disease prediction and classification. The homemade one-dimensional metal oxide sensing elements such as ZnO, Cr-doped ZnO, and ZnO/NiO were integrated with the aforementioned sensor array for the specific detection of the three biomarkers of interest. This model has attained a classification accuracy of 99.77, 94.91, and 96.56% toward ammonia, ethanol, and acetone, respectively. And the multiclass disease biomarker classification accuracy of the readymade and homemade eNose prototype models was compared, and the results are summarized.
Collapse
Affiliation(s)
- Bhuvaneswari Selvaraj
- Centre
for Nanotechnology & Advanced Biomaterials (CeNTAB), SASTRA Deemed University, Thanjavur, Tamil Nadu 613 401, India
- School
of Electrical & Electronics Engineering, SASTRA Deemed University, Thanjavur, Tamil Nadu 613 401, India
| | - Elakkiya Rajasekar
- Department
of Computer Science, Birla Institute of
Technology & Science, Pilani Dubai Campus, Dubai International Academic
City, Dubai 345055, United Arab Emirates
| | - John Bosco Balaguru Rayappan
- Centre
for Nanotechnology & Advanced Biomaterials (CeNTAB), SASTRA Deemed University, Thanjavur, Tamil Nadu 613 401, India
- School
of Electrical & Electronics Engineering, SASTRA Deemed University, Thanjavur, Tamil Nadu 613 401, India
| |
Collapse
|
6
|
Chaturvedi M, Patel M, Tiwari A, Dwivedi N, Mondal DP, Srivastava AK, Dhand C. An insight to the recent advancements in detection of Mycobacterium tuberculosis using biosensors: A systematic review. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2024; 186:14-27. [PMID: 38052326 DOI: 10.1016/j.pbiomolbio.2023.10.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Revised: 07/31/2023] [Accepted: 10/01/2023] [Indexed: 12/07/2023]
Abstract
Since ancient times, Tuberculosis (TB) has been a severe invasive illness that has been prevalent for thousands of years and is also known as "consumption" or phthisis. TB is the most common chronic lung bacterial illness in the world, killing over 2 million people each year, caused by Mycobacterium tuberculosis (MTB). As per the reports of WHO, in spite of technology advancements, the average rate of decline in global TB infections from 2000-2018 was only 1.6% per year, and the worldwide reduction in TB deaths was only 11%. In addition, COVID-19 pandemic has reversed years of global progress in tackling TB with fewer diagnosed cases. The majority of undiagnosed patients of TB are found in low- and middle-income countries where the GeneXpert MTB/RIF assay and sputum smear microscopy have been approved by the WHO as reference procedures for quickly detecting TB. Biosensors, like other cutting-edge technologies, have piqued researchers' interest since they offer a quick and accurate way to identify MTB. Modern integrated technologies allow for the rapid, low-cost, and highly precise detection of analytes in extremely little amounts of sample by biosensors. Here in this review, we outlined the severity of tuberculosis (TB) and the most recent developments in the biosensors sector, as well as their various kinds and benefits for TB detection. The review also emphasizes how widespread TB is and how it needs accurate diagnosis and effective treatment.
Collapse
Affiliation(s)
- Mansi Chaturvedi
- CSIR-Advanced Materials and Processes Research Institute, Hoshangabad Road, Bhopal, 462026, India; School of Biomolecular Engineering & Biotechnology UTD RGPV, Bhopal, 462033, India
| | - Monika Patel
- CSIR-Advanced Materials and Processes Research Institute, Hoshangabad Road, Bhopal, 462026, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Archana Tiwari
- School of Biomolecular Engineering & Biotechnology UTD RGPV, Bhopal, 462033, India
| | - Neeraj Dwivedi
- CSIR-Advanced Materials and Processes Research Institute, Hoshangabad Road, Bhopal, 462026, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - D P Mondal
- CSIR-Advanced Materials and Processes Research Institute, Hoshangabad Road, Bhopal, 462026, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Avanish Kumar Srivastava
- CSIR-Advanced Materials and Processes Research Institute, Hoshangabad Road, Bhopal, 462026, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Chetna Dhand
- CSIR-Advanced Materials and Processes Research Institute, Hoshangabad Road, Bhopal, 462026, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
| |
Collapse
|
7
|
Sharma A, James A, Kapoor DN, Kaurav H, Sharma AK, Nagraik R. An insight into biosensing platforms used for the diagnosis of various lung diseases: A review. Biotechnol Bioeng 2024; 121:71-81. [PMID: 37661712 DOI: 10.1002/bit.28538] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Revised: 07/08/2023] [Accepted: 08/15/2023] [Indexed: 09/05/2023]
Abstract
Many of the infectious diseases are ubiquitous in nature and pose a threat to global and public health. The original cause for such type of serious maladies can be summarized as the scarcity of appropriate analysis and treatment methods. Pulmonary diseases are considered one of the life-threatening lung diseases that affect millions of people globally. It consists of several types, namely, asthma, lung cancer, tuberculosis, chronic obstructive pulmonary disease, and several respiratory-related infections. This is due to the limited access to well-equipped healthcare facilities for early disease diagnosis. This needs the availability of processes and technologies that can help to stop this harmful disease-diagnosing practice. Various approaches for diagnosing various lung diseases have been developed over time, namely, autopsy, chest X-rays, low-dose CT scans, and so forth. The need of the hour is to develop a rapid, simple, portable, and low-cost method for the diagnosis of pulmonary diseases. So nowadays, biosensors have been becoming one of the highest priority research areas as a potentially useful tool for the early diagnosis and detection of many pulmonary lung diseases. In this review article, various types of biosensors and their applications in the diagnosis of lung-related disorders are expansively explained.
Collapse
Affiliation(s)
- Avinash Sharma
- Faculty of Applied Sciences and Biotechnology, Shoolini University, Solan, Himachal Pradesh, India
| | - Abija James
- Faculty of Applied Sciences and Biotechnology, Shoolini University, Solan, Himachal Pradesh, India
| | - Deepak N Kapoor
- Faculty of Pharmaceutical Sciences, Shoolini University, Solan, Himachal Pradesh, India
| | - Hemlata Kaurav
- Faculty of Pharmaceutical Sciences, Shoolini University, Solan, Himachal Pradesh, India
| | - Abhishek Kumar Sharma
- Faculty of Pharmaceutical Sciences, Shoolini University, Solan, Himachal Pradesh, India
| | - Rupak Nagraik
- Faculty of Applied Sciences and Biotechnology, Shoolini University, Solan, Himachal Pradesh, India
| |
Collapse
|
8
|
Berna AZ, Merriman JA, Mellett L, Parchment DK, Caparon MG, Odom John AR. Volatile profiling distinguishes Streptococcus pyogenes from other respiratory streptococcal species. mSphere 2023; 8:e0019423. [PMID: 37791788 PMCID: PMC10597408 DOI: 10.1128/msphere.00194-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2023] [Accepted: 08/13/2023] [Indexed: 10/05/2023] Open
Abstract
Sore throat is one of the most common complaints encountered in the ambulatory clinical setting. Rapid, culture-independent diagnostic techniques that do not rely on pharyngeal swabs would be highly valuable as a point-of-care strategy to guide outpatient antibiotic treatment. Despite the promise of this approach, efforts to detect volatiles during oropharyngeal infection have yet been limited. In our research study, we sought to evaluate for specific bacterial volatile organic compounds (VOC) biomarkers in isolated cultures in vitro, in order to establish proof-of-concept prior to initial clinical studies of breath biomarkers. A particular challenge for the diagnosis of pharyngitis due to Streptococcus pyogenes is the likelihood that many metabolites may be shared by S. pyogenes and other related oropharyngeal colonizing bacterial species. Therefore, we evaluated whether sufficient metabolic differences are present, which distinguish the volatile metabolome of Group A streptococci from other streptococcal species that also colonize the respiratory mucosa, such as Streptococcus pneumoniae and Streptococcus intermedius. In this work, we identified 27 discriminatory VOCs (q-values < 0.05), composed of aldehydes, alcohols, nitrogen-containing compounds, hydrocarbons, ketones, aromatic compounds, esters, ethers, and carboxylic acid. From this group of volatiles, we identify candidate biomarkers that distinguish S. pyogenes from other species and establish highly produced VOCs that indicate the presence of S. pyogenes in vitro, supporting future breath-based diagnostic testing for streptococcal pharyngitis. IMPORTANCE Acute pharyngitis accounts for approximately 15 million ambulatory care visits in the United States. The most common and important bacterial cause of pharyngitis is Streptococcus pyogenesis, accounting for 15%-30% of pediatric pharyngitis. Distinguishing between bacterial and viral pharyngitis is key to management in US practice. The culture of a specimen obtained by a throat swab is the standard laboratory procedure for the microbiologic confirmation of pharyngitis; however, this method is time-consuming, which delays appropriate treatment. If left untreated, S. pyogenes pharyngitis may lead to local and distant complications. In this study, we characterized the volatile metabolomes of S. pyogenes and other related oropharyngeal colonizing bacterial species. We identify candidate biomarkers that distinguish S. pyogenes from other species and provide evidence to support future breath-based diagnostic testing for streptococcal pharyngitis.
Collapse
Affiliation(s)
- Amalia Z. Berna
- Department of Pediatrics, Washington University School of Medicine, St. Louis, Missouri, USA
- Department of Pediatrics, Children’s Hospital of Philadelphia, Philadelphia, Pennsylvania, USA
| | - Joseph A. Merriman
- Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, Missouri, USA
- Microbiome Therapies Initiative, Stanford University, Palo Alto, California, USA
| | - Leah Mellett
- Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, Missouri, USA
| | - Danealle K. Parchment
- Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, Missouri, USA
- Vaccine Research Center, National Institute of Allergy and Infectious Diseases, Bethesda, Maryland, USA
| | - Michael G. Caparon
- Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, Missouri, USA
| | - Audrey R. Odom John
- Department of Pediatrics, Washington University School of Medicine, St. Louis, Missouri, USA
- Department of Pediatrics, Children’s Hospital of Philadelphia, Philadelphia, Pennsylvania, USA
- Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA
| |
Collapse
|
9
|
Li Y, Wei X, Zhou Y, Wang J, You R. Research progress of electronic nose technology in exhaled breath disease analysis. MICROSYSTEMS & NANOENGINEERING 2023; 9:129. [PMID: 37829158 PMCID: PMC10564766 DOI: 10.1038/s41378-023-00594-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Revised: 08/16/2023] [Accepted: 08/17/2023] [Indexed: 10/14/2023]
Abstract
Exhaled breath analysis has attracted considerable attention as a noninvasive and portable health diagnosis method due to numerous advantages, such as convenience, safety, simplicity, and avoidance of discomfort. Based on many studies, exhaled breath analysis is a promising medical detection technology capable of diagnosing different diseases by analyzing the concentration, type and other characteristics of specific gases. In the existing gas analysis technology, the electronic nose (eNose) analysis method has great advantages of high sensitivity, rapid response, real-time monitoring, ease of use and portability. Herein, this review is intended to provide an overview of the application of human exhaled breath components in disease diagnosis, existing breath testing technologies and the development and research status of electronic nose technology. In the electronic nose technology section, the three aspects of sensors, algorithms and existing systems are summarized in detail. Moreover, the related challenges and limitations involved in the abovementioned technologies are also discussed. Finally, the conclusion and perspective of eNose technology are presented.
Collapse
Affiliation(s)
- Ying Li
- School of Instrument Science and Opto-Electronics Engineering, Beijing Information Science and Technology University, Beijing, 100192 China
- Laboratory of Intelligent Microsystems, Beijing Information Science and Technology University, Beijing, 100192 China
| | - Xiangyang Wei
- School of Instrument Science and Opto-Electronics Engineering, Beijing Information Science and Technology University, Beijing, 100192 China
- Laboratory of Intelligent Microsystems, Beijing Information Science and Technology University, Beijing, 100192 China
| | - Yumeng Zhou
- School of Instrument Science and Opto-Electronics Engineering, Beijing Information Science and Technology University, Beijing, 100192 China
| | - Jing Wang
- School of Electronics and Information Engineering, Changchun University of Science and Technology, Changchun, 130022 China
| | - Rui You
- School of Instrument Science and Opto-Electronics Engineering, Beijing Information Science and Technology University, Beijing, 100192 China
- Laboratory of Intelligent Microsystems, Beijing Information Science and Technology University, Beijing, 100192 China
| |
Collapse
|
10
|
Talens JB, Pelegri-Sebastia J, Sogorb T, Ruiz JL. Prostate cancer detection using e-nose and AI for high probability assessment. BMC Med Inform Decis Mak 2023; 23:205. [PMID: 37803440 PMCID: PMC10559535 DOI: 10.1186/s12911-023-02312-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Accepted: 09/28/2023] [Indexed: 10/08/2023] Open
Abstract
This research aims to develop a diagnostic tool that can quickly and accurately detect prostate cancer using electronic nose technology and a neural network trained on a dataset of urine samples from patients diagnosed with both prostate cancer and benign prostatic hyperplasia, which incorporates a unique data redundancy method. By analyzing signals from these samples, we were able to significantly reduce the number of unnecessary biopsies and improve the classification method, resulting in a recall rate of 91% for detecting prostate cancer. The goal is to make this technology widely available for use in primary care centers, to allow for rapid and non-invasive diagnoses.
Collapse
Affiliation(s)
- J B Talens
- Sensor and Magnetism Group, Institut de Recerca Per a La Gestió Integrada de Zones Costaneres (IGIC), Campus de Gandia, Universitat Politecnica de Valencia, Paranimf 1, Grao de Gandia, 46000, Valencia, Spain
- Educacion, Conselleria de Educacion, Cultura y Deporte, Av. de Campanar, 32, 46015, Valencia, Spain
| | - J Pelegri-Sebastia
- Sensor and Magnetism Group, Institut de Recerca Per a La Gestió Integrada de Zones Costaneres (IGIC), Campus de Gandia, Universitat Politecnica de Valencia, Paranimf 1, Grao de Gandia, 46000, Valencia, Spain.
| | - T Sogorb
- Sensor and Magnetism Group, Institut de Recerca Per a La Gestió Integrada de Zones Costaneres (IGIC), Campus de Gandia, Universitat Politecnica de Valencia, Paranimf 1, Grao de Gandia, 46000, Valencia, Spain
| | - J L Ruiz
- Surgery Department, Universitat de Valencia, Av Fernando Abril, Martorell, 106., 46026, Valencia, Spain
| |
Collapse
|
11
|
Nie E, He P, Peng W, Zhang H, Lü F. Microbial volatile organic compounds as novel indicators of anaerobic digestion instability: Potential and challenges. Biotechnol Adv 2023; 67:108204. [PMID: 37356597 DOI: 10.1016/j.biotechadv.2023.108204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Revised: 06/07/2023] [Accepted: 06/19/2023] [Indexed: 06/27/2023]
Abstract
The wide application of anaerobic digestion (AD) technology is limited by process fluctuations. Thus, process monitoring based on screening state parameters as early warning indicators (EWI) is a top priority for AD facilities. However, predicting anaerobic digester stability based on such indicators is difficult, and their threshold values are uncertain, case-specific, and sometimes produce conflicting results. Thus, new EWI should be proposed to integrate microbial and metabolic information. These microbial volatile organic compounds (mVOCs) including alkanes, alkenes, alkynes, aromatic compounds are produced by microorganisms (bacteria, archaea and fungi), which might serve as a promising diagnostic tool for environmental monitoring. Moreover, mVOCs diffuse in both gas and liquid phases and are considered the language of intra kingdom microbial interactions. Herein, we highlight the potential of mVOCs as EWI for AD process instability, including discussions regarding characteristics and sources of mVOCs as well as sampling and determination methods. Furthermore, existing challenges must be addressed, before mVOCs profiling can be used as an early warning system for diagnosing AD process instability, such as mVOCs sampling, analysis and identification. Finally, we discuss the potential biotechnology applications of mVOCs and approaches to overcome the challenges regarding their application.
Collapse
Affiliation(s)
- Erqi Nie
- Institute of Waste Treatment and Reclamation, Tongji University, Shanghai 200092, People's Republic of China
| | - Pinjing He
- Institute of Waste Treatment and Reclamation, Tongji University, Shanghai 200092, People's Republic of China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, People's Republic of China
| | - Wei Peng
- Institute of Waste Treatment and Reclamation, Tongji University, Shanghai 200092, People's Republic of China
| | - Hua Zhang
- Institute of Waste Treatment and Reclamation, Tongji University, Shanghai 200092, People's Republic of China
| | - Fan Lü
- Institute of Waste Treatment and Reclamation, Tongji University, Shanghai 200092, People's Republic of China.
| |
Collapse
|
12
|
Savito L, Scarlata S, Bikov A, Carratù P, Carpagnano GE, Dragonieri S. Exhaled volatile organic compounds for diagnosis and monitoring of asthma. World J Clin Cases 2023; 11:4996-5013. [PMID: 37583852 PMCID: PMC10424019 DOI: 10.12998/wjcc.v11.i21.4996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Revised: 06/08/2023] [Accepted: 07/06/2023] [Indexed: 07/26/2023] Open
Abstract
The asthmatic inflammatory process results in the generation of volatile organic compounds (VOCs), which are subsequently secreted by the airways. The study of these elements through gas chromatography-mass spectrometry (GC-MS), which can identify individual molecules with a discriminatory capacity of over 85%, and electronic-Nose (e-NOSE), which is able to perform a quick onboard pattern-recognition analysis of VOCs, has allowed new prospects for non-invasive analysis of the disease in an "omics" approach. In this review, we aim to collect and compare the progress made in VOCs analysis using the two methods and their instrumental characteristics. Studies have described the potential of GC-MS and e-NOSE in a multitude of relevant aspects of the disease in both children and adults, as well as differential diagnosis between asthma and other conditions such as wheezing, cystic fibrosis, COPD, allergic rhinitis and last but not least, the accuracy of these methods compared to other diagnostic tools such as lung function, FeNO and eosinophil count. Due to significant limitations of both methods, it is still necessary to improve and standardize techniques. Currently, e-NOSE appears to be the most promising aid in clinical practice, whereas GC-MS, as the gold standard for the structural analysis of molecules, remains an essential tool in terms of research for further studies on the pathophysiologic pathways of the asthmatic inflammatory process. In conclusion, the study of VOCs through GC-MS and e-NOSE appears to hold promise for the non-invasive diagnosis, assessment, and monitoring of asthma, as well as for further research studies on the disease.
Collapse
Affiliation(s)
- Luisa Savito
- Department of Internal Medicine, Unit of Respiratory Pathophysiology and Thoracic Endoscopy, Fondazione Policlinico Universitario Campus Bio Medico, Rome 00128, Italy
| | - Simone Scarlata
- Department of Internal Medicine, Unit of Respiratory Pathophysiology and Thoracic Endoscopy, Fondazione Policlinico Universitario Campus Bio Medico, Rome 00128, Italy
| | - Andras Bikov
- Wythenshawe Hospital, Manchester University NHS Foundation Trust, Manchester Academic Health Science Centre, Manchester M13 9WL, United Kingdom
- Division of Infection, Immunity and Respiratory Medicine, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester M13 9PT, United Kingdom
| | - Pierluigi Carratù
- Department of Internal Medicine "A.Murri", University of Bari "Aldo Moro", Bari 70124, Italy
| | | | - Silvano Dragonieri
- Department of Respiratory Diseases, University of Bari, Bari 70124, Italy
| |
Collapse
|
13
|
Tian B, Liu W, Mo H, Li W, Wang Y, Adhikari BR. Detecting the Unseen: Understanding the Mechanisms and Working Principles of Earthquake Sensors. SENSORS (BASEL, SWITZERLAND) 2023; 23:s23115335. [PMID: 37300062 DOI: 10.3390/s23115335] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Revised: 05/29/2023] [Accepted: 05/30/2023] [Indexed: 06/12/2023]
Abstract
The application of movement-detection sensors is crucial for understanding surface movement and tectonic activities. The development of modern sensors has been instrumental in earthquake monitoring, prediction, early warning, emergency commanding and communication, search and rescue, and life detection. There are numerous sensors currently being utilized in earthquake engineering and science. It is essential to review their mechanisms and working principles thoroughly. Hence, we have attempted to review the development and application of these sensors by classifying them based on the timeline of earthquakes, the physical or chemical mechanisms of sensors, and the location of sensor platforms. In this study, we analyzed available sensor platforms that have been widely used in recent years, with satellites and UAVs being among the most used. The findings of our study will be useful for future earthquake response and relief efforts, as well as research aimed at reducing earthquake disaster risks.
Collapse
Affiliation(s)
- Bingwei Tian
- Institute for Disaster Management and Reconstruction, Sichuan University-The Hong Kong Polytechnic University, Chengdu 610207, China
| | - Wenrui Liu
- Sichuan University-Pittsburgh Institute, Sichuan University, Chengdu 610065, China
| | - Haozhou Mo
- Sichuan University-Pittsburgh Institute, Sichuan University, Chengdu 610065, China
| | - Wang Li
- Sichuan University-Pittsburgh Institute, Sichuan University, Chengdu 610065, China
| | - Yuting Wang
- Institute for Disaster Management and Reconstruction, Sichuan University-The Hong Kong Polytechnic University, Chengdu 610207, China
| | - Basanta Raj Adhikari
- Institute for Disaster Management and Reconstruction, Sichuan University-The Hong Kong Polytechnic University, Chengdu 610207, China
- Department of Civil Engineering, Pulchowk Campus, Tribuvan University, Lalitpur 44600, Nepal
| |
Collapse
|
14
|
Wilson AD, Forse LB. Potential for Early Noninvasive COVID-19 Detection Using Electronic-Nose Technologies and Disease-Specific VOC Metabolic Biomarkers. SENSORS (BASEL, SWITZERLAND) 2023; 23:2887. [PMID: 36991597 PMCID: PMC10054641 DOI: 10.3390/s23062887] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2023] [Revised: 02/19/2023] [Accepted: 03/03/2023] [Indexed: 06/12/2023]
Abstract
The established efficacy of electronic volatile organic compound (VOC) detection technologies as diagnostic tools for noninvasive early detection of COVID-19 and related coronaviruses has been demonstrated from multiple studies using a variety of experimental and commercial electronic devices capable of detecting precise mixtures of VOC emissions in human breath. The activities of numerous global research teams, developing novel electronic-nose (e-nose) devices and diagnostic methods, have generated empirical laboratory and clinical trial test results based on the detection of different types of host VOC-biomarker metabolites from specific chemical classes. COVID-19-specific volatile biomarkers are derived from disease-induced changes in host metabolic pathways by SARS-CoV-2 viral pathogenesis. The unique mechanisms proposed from recent researchers to explain how COVID-19 causes damage to multiple organ systems throughout the body are associated with unique symptom combinations, cytokine storms and physiological cascades that disrupt normal biochemical processes through gene dysregulation to generate disease-specific VOC metabolites targeted for e-nose detection. This paper reviewed recent methods and applications of e-nose and related VOC-detection devices for early, noninvasive diagnosis of SARS-CoV-2 infections. In addition, metabolomic (quantitative) COVID-19 disease-specific chemical biomarkers, consisting of host-derived VOCs identified from exhaled breath of patients, were summarized as possible sources of volatile metabolic biomarkers useful for confirming and supporting e-nose diagnoses.
Collapse
Affiliation(s)
- Alphus Dan Wilson
- Pathology Department, Center for Forest Health & Disturbance, Forest Genetics and Ecosystems Biology, Southern Research Station, USDA Forest Service, Stoneville, MS 38776, USA
| | - Lisa Beth Forse
- Southern Hardwoods Laboratory, Southern Research Station, USDA Forest Service, Stoneville, MS 38776, USA
| |
Collapse
|
15
|
Tingting D, Lei Z, Yifei W, Hao Z, Li H, Xiaoxia D. Integrated Lithium Battery-Powered High-Field Asymmetric Ion Mobility Spectrometer (FAIMS) for Molecular Structure Fingerprinting and Deep Learning. ANAL LETT 2023. [DOI: 10.1080/00032719.2023.2185784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/08/2023]
Affiliation(s)
- Duan Tingting
- School of Life and Environmental Sciences, GuiLin University of Electronic Technology, Guilin, Guangxi, China
| | - Zhao Lei
- School of Life and Environmental Sciences, GuiLin University of Electronic Technology, Guilin, Guangxi, China
| | - Wang Yifei
- School of Life and Environmental Sciences, GuiLin University of Electronic Technology, Guilin, Guangxi, China
| | - Zeng Hao
- School of Life and Environmental Sciences, GuiLin University of Electronic Technology, Guilin, Guangxi, China
| | - Hua Li
- School of Life and Environmental Sciences, GuiLin University of Electronic Technology, Guilin, Guangxi, China
| | - Du Xiaoxia
- School of Life and Environmental Sciences, GuiLin University of Electronic Technology, Guilin, Guangxi, China
| |
Collapse
|
16
|
Huo D, Zhang J, Dai X, Zhang P, Zhang S, Yang X, Wang J, Liu M, Sun X, Chen H. A Bio-Inspired Spiking Neural Network with Few-Shot Class-Incremental Learning for Gas Recognition. SENSORS (BASEL, SWITZERLAND) 2023; 23:2433. [PMID: 36904636 PMCID: PMC10006916 DOI: 10.3390/s23052433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Revised: 02/17/2023] [Accepted: 02/20/2023] [Indexed: 06/18/2023]
Abstract
The sensitivity and selectivity profiles of gas sensors are always changed by sensor drifting, sensor aging, and the surroundings (e.g., temperature and humidity changes), which lead to a serious decline in gas recognition accuracy or even invalidation. To address this issue, the practical solution is to retrain the network to maintain performance, leveraging its rapid, incremental online learning capacity. In this paper, we develop a bio-inspired spiking neural network (SNN) to recognize nine types of flammable and toxic gases, which supports few-shot class-incremental learning, and can be retrained quickly with a new gas at a low accuracy cost. Compared with gas recognition approaches such as support vector machine (SVM), k-nearest neighbor (KNN), principal component analysis (PCA) +SVM, PCA+KNN, and artificial neural network (ANN), our network achieves the highest accuracy of 98.75% in five-fold cross-validation for identifying nine types of gases, each with five different concentrations. In particular, the proposed network has a 5.09% higher accuracy than that of other gas recognition algorithms, which validates its robustness and effectiveness for real-life fire scenarios.
Collapse
Affiliation(s)
- Dexuan Huo
- School of Integrated Circuits, Tsinghua University, Beijing 100084, China
| | - Jilin Zhang
- School of Integrated Circuits, Tsinghua University, Beijing 100084, China
| | - Xinyu Dai
- School of Integrated Circuits, Tsinghua University, Beijing 100084, China
| | - Pingping Zhang
- Suzhou Huiwen Nanotechnology Co., Ltd., Suzhou 215004, China
| | - Shumin Zhang
- Suzhou Huiwen Nanotechnology Co., Ltd., Suzhou 215004, China
| | - Xiao Yang
- Suzhou Huiwen Nanotechnology Co., Ltd., Suzhou 215004, China
| | - Jiachuang Wang
- State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai 200050, China
| | - Mengwei Liu
- State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai 200050, China
| | - Xuhui Sun
- Suzhou Huiwen Nanotechnology Co., Ltd., Suzhou 215004, China
| | - Hong Chen
- School of Integrated Circuits, Tsinghua University, Beijing 100084, China
| |
Collapse
|
17
|
Bauër P, Leemans M, Audureau E, Gilbert C, Armal C, Fromantin I. Remote Medical Scent Detection of Cancer and Infectious Diseases With Dogs and Rats: A Systematic Review. Integr Cancer Ther 2022; 21:15347354221140516. [PMID: 36541180 PMCID: PMC9791295 DOI: 10.1177/15347354221140516] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Abstract
BACKGROUND Remote medical scent detection of cancer and infectious diseases with dogs and rats has been an increasing field of research these last 20 years. If validated, the possibility of implementing such a technique in the clinic raises many hopes. This systematic review was performed to determine the evidence and performance of such methods and assess their potential relevance in the clinic. METHODS Pubmed and Web of Science databases were independently searched based on PRISMA standards between 01/01/2000 and 01/05/2021. We included studies aiming at detecting cancers and infectious diseases affecting humans with dogs or rats. We excluded studies using other animals, studies aiming to detect agricultural diseases, diseases affecting animals, and others such as diabetes and neurodegenerative diseases. Only original articles were included. Data about patients' selection, samples, animal characteristics, animal training, testing configurations, and performances were recorded. RESULTS A total of 62 studies were included. Sensitivity and specificity varied a lot among studies: While some publications report low sensitivities of 0.17 and specificities around 0.29, others achieve rates of 1 sensitivity and specificity. Only 6 studies were evaluated in a double-blind screening-like situation. In general, the risk of performance bias was high in most evaluated studies, and the quality of the evidence found was low. CONCLUSIONS Medical detection using animals' sense of smell lacks evidence and performances so far to be applied in the clinic. What odors the animals detect is not well understood. Further research should be conducted, focusing on patient selection, samples (choice of materials, standardization), and testing conditions. Interpolations of such results to free running detection (direct contact with humans) should be taken with extreme caution. Considering this synthesis, we discuss the challenges and highlight the excellent odor detection threshold exhibited by animals which represents a potential opportunity to develop an accessible and non-invasive method for disease detection.
Collapse
Affiliation(s)
- Pierre Bauër
- Institut Curie, Paris, France,Univ Paris Est Creteil, INSERM, IMRB, Team CEpiA
| | - Michelle Leemans
- Univ Paris Est Creteil, INSERM, IMRB, Team CEpiA,Michelle Leemans, Univ Paris Est Creteil, INSERM, IMRB, Team CEpiA, 61 Av. du Général de Gaulle, 94000 Créteil, F-94010 Créteil, France.
| | | | - Caroline Gilbert
- Muséum National d’Histoire Naturelle, Brunoy, France,Ecole nationale vétérinaire d’Alfort, Maisons-Alfort cedex, France
| | | | - Isabelle Fromantin
- Institut Curie, Paris, France,Univ Paris Est Creteil, INSERM, IMRB, Team CEpiA
| |
Collapse
|
18
|
Aerial Separation and Receiver Arrangements on Identifying Lung Syndromes Using the Artificial Neural Network. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2022; 2022:7298903. [PMID: 36052039 PMCID: PMC9427225 DOI: 10.1155/2022/7298903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Revised: 06/29/2022] [Accepted: 07/29/2022] [Indexed: 11/17/2022]
Abstract
Lung disease is one of the most harmful diseases in traditional days and is the same nowadays. Early detection is one of the most crucial ways to prevent a human from developing these types of diseases. Many researchers are involved in finding various techniques for predicting the accuracy of the diseases. On the basis of the machine learning algorithm, it was not possible to predict the better accuracy when compared to the deep learning technique; this work has proposed enhanced artificial neural network approaches for the accuracy of lung diseases. Here, the discrete Fourier transform and the Burg auto-regression techniques are used for extracting the computed tomography (CT) scan images, and feature reduction takes place by using principle component analysis (PCA). This proposed work has used the 120 subjective datasets from public landmarks with and without lung diseases. The given dataset is trained by using an enhanced artificial neural network (ANN). The preprocessing techniques are handled by using a Gaussian filter; thus, our proposed approach provides enhanced classification accuracy. Finally, our proposed method is compared with the existing machine learning approach based on its accuracy.
Collapse
|
19
|
Ouni B, Larbi T, Amlouk M. Structural, Optical Properties of Zr Doping Mn3O4 Sprayed Thin Films and Ethanol Sensing. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY A 2022. [DOI: 10.1134/s0036024422080192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
|
20
|
Wei L, Wei S, Hu D, Feng L, Liu Y, Liu H, Liao W. Comprehensive Flavor Analysis of Volatile Components During the Vase Period of Cut Lily ( Lilium spp. 'Manissa') Flowers by HS-SPME/GC-MS Combined With E-Nose Technology. FRONTIERS IN PLANT SCIENCE 2022; 13:822956. [PMID: 35783924 PMCID: PMC9247614 DOI: 10.3389/fpls.2022.822956] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Accepted: 05/23/2022] [Indexed: 06/15/2023]
Abstract
Volatile compounds could affect the flavor and ornamental quality of cut flowers, but the flavor change occurring during the vase period of the cut flower is unclear. To clarify the dynamic changes during the vase period of cut lily (Lilium spp. 'Manissa') flowers, comprehensive flavor profiles were characterized by the electronic nose (E-nose) and headspace solid-phase microextraction gas chromatography-mass spectrometry (HS-SPME/GC-MS). The response value of sensor W2W was significantly higher than other sensors, and its response value reached the highest on day 4. A total of 59 volatiles were detected in cut lilies by HS-SPME/GC-MS, mainly including aldehydes, alcohols, and esters. There were 19 volatiles with odor activity values (OAVs) greater than 1. Floral and fruity aromas were stronger, followed by a pungent scent. Principal component analysis (PCA) and hierarchical cluster analysis (HCA) could effectively discriminate lily samples derived from different vase times on the basis of E-nose and HS-SPME-GC-MS. In summary, our study investigates the flavor change profile and the diversity of volatile compounds during the vase period of cut lilies, and lilies on day 4 after harvest exhibited excellent aroma and flavor taking into consideration of the flavor intensity and diversity. This provided theoretical guidance for the assessment of scent volatiles and flavor quality during the vase period of cut lily flowers and will be helpful for the application of cut lilies during the postharvest process.
Collapse
|
21
|
Weigelt MA, Lev-Tov HA, Tomic-Canic M, Lee WD, Williams R, Strasfeld D, Kirsner RS, Herman IM. Advanced Wound Diagnostics: Toward Transforming Wound Care into Precision Medicine. Adv Wound Care (New Rochelle) 2022; 11:330-359. [PMID: 34128387 PMCID: PMC8982127 DOI: 10.1089/wound.2020.1319] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 05/29/2021] [Indexed: 11/01/2022] Open
Abstract
Significance: Nonhealing wounds are an ever-growing global pandemic, with mortality rates and management costs exceeding many common cancers. Although our understanding of the molecular and cellular factors driving wound healing continues to grow, standards for diagnosing and evaluating wounds remain largely subjective and experiential, whereas therapeutic strategies fail to consistently achieve closure and clinicians are challenged to deliver individualized care protocols. There is a need to apply precision medicine practices to wound care by developing evidence-based approaches, which are predictive, prescriptive, and personalized. Recent Advances: Recent developments in "advanced" wound diagnostics, namely biomarkers (proteases, acute phase reactants, volatile emissions, and more) and imaging systems (ultrasound, autofluorescence, spectral imaging, and optical coherence tomography), have begun to revolutionize our understanding of the molecular wound landscape and usher in a modern age of therapeutic strategies. Herein, biomarkers and imaging systems with the greatest evidence to support their potential clinical utility are reviewed. Critical Issues: Although many potential biomarkers have been identified and several imaging systems have been or are being developed, more high-quality randomized controlled trials are necessary to elucidate the currently questionable role that these tools are playing in altering healing dynamics or predicting wound closure within the clinical setting. Future Directions: The literature supports the need for the development of effective point-of-care wound assessment tools, such as a platform diagnostic array that is capable of measuring multiple biomarkers at once. These, along with advances in telemedicine, synthetic biology, and "smart" wearables, will pave the way for the transformation of wound care into a precision medicine. Clinical Trial Registration number: NCT03148977.
Collapse
Affiliation(s)
- Maximillian A. Weigelt
- Dr. Phillip Frost Department of Dermatology & Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA
| | - Hadar A. Lev-Tov
- Dr. Phillip Frost Department of Dermatology & Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA
| | - Marjana Tomic-Canic
- Dr. Phillip Frost Department of Dermatology & Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA
| | - W. David Lee
- Precision Healing, Inc., Newton, Massachusetts, USA
| | | | | | - Robert S. Kirsner
- Dr. Phillip Frost Department of Dermatology & Cutaneous Surgery, University of Miami Miller School of Medicine, Miami, Florida, USA
| | - Ira M. Herman
- Precision Healing, Inc., Newton, Massachusetts, USA
- Graduate School of Biomedical Sciences, Tufts University School of Medicine, Boston, Massachusetts, USA
| |
Collapse
|
22
|
Chen H, Huo D, Zhang J. Gas Recognition in E-Nose System: A Review. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2022; 16:169-184. [PMID: 35412988 DOI: 10.1109/tbcas.2022.3166530] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Gas recognition is essential in an electronic nose (E-nose) system, which is responsible for recognizing multivariate responses obtained by gas sensors in various applications. Over the past decades, classical gas recognition approaches such as principal component analysis (PCA) have been widely applied in E-nose systems. In recent years, artificial neural network (ANN) has revolutionized the field of E-nose, especially spiking neural network (SNN). In this paper, we investigate recent gas recognition methods for E-nose, and compare and analyze them in terms of algorithms and hardware implementations. We find each classical gas recognition method has a relatively fixed framework and a few parameters, which makes it easy to be designed and perform well with limited gas samples, but weak in multi-gas recognition under noise. While ANN-based methods obtain better recognition accuracy with flexible architectures and lots of parameters. However, some ANNs are too complex to be implemented in portable E-nose systems, such as deep convolutional neural networks (CNNs). In contrast, SNN-based gas recognition methods achieve satisfying accuracy and recognize more types of gases, and could be implemented with energy-efficient hardware, which makes them a promising candidate in multi-gas identification.
Collapse
|
23
|
Grape Cultivar Identification and Classification by Machine Olfaction Analysis of Leaf Volatiles. CHEMOSENSORS 2022. [DOI: 10.3390/chemosensors10040125] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Development of electronic technologies for precise identification of fruit crop cultivars in agricultural production provides an effective means for assuring product quality and authentication. The capabilities of discriminating between grape (Vitis vinifera L.) cultivars is essential for assuring certification of varieties sold in world markets. Machine olfaction, based on electronic-nose (e-nose) technologies, is readily available for rapid identification of fruit and vegetative agricultural products. This technology relies on detection of and discrimination between volatile organic compound (VOC) emissions from plant parts. It may be used in all stages of agricultural production to facilitate crop maintenance, cultivation, and harvesting decisions prior to marketing. An experimental e-nose device was constructed and tested in combination with five chemometric methods, including PCA, LDA, QDA, SVM, and ANN, as rapid, non-destructive tools for identification and classification of grape cultivars. An e-nose instrument equipped with nine metal oxide semiconductor (MOS) sensors was utilized to identify and classify five grape cultivars based on leaf VOC emissions using supervised and non-supervised methods. Grape leaf samples were first identified as belonging to specific cultivar types using PCA analyses, which are non-supervised classification methods, with the first two principal components (PC-1 and PC-2) accounting for 89% of the total variance. Four supervised statistical methods were further tested, including DA, QDA, SVM, and ANN, and provided effective discrimination accuracies of 98%, 99%, 92%, and 99%, respectively. These findings confirmed the suitable applicability of an MOS e-nose sensor array with supervised methods for accurate identification of grape cultivars, which is useful for authentication of vine cultivar types for commercial markets.
Collapse
|
24
|
A Liver Damage Prediction Using Partial Differential Segmentation with Improved Convolutional Neural Network. JOURNAL OF HEALTHCARE ENGINEERING 2022; 2022:4055491. [PMID: 35265300 PMCID: PMC8898868 DOI: 10.1155/2022/4055491] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Revised: 12/20/2021] [Accepted: 01/17/2022] [Indexed: 11/19/2022]
Abstract
Background The liver is one of the most significant and most essential organs in the human body. It is divided into two granular lobes, one on the right and one on the left, connected by a bile duct. The liver is essential in the removal of waste products from human food consumption, the creation of bile, the regulation of metabolic activities, the cleaning of the blood by sensitizing digestive management, and the storage of vitamins and minerals. To perform the classification of liver illnesses using computed tomography (CT scans), two critical phases must first be completed: liver segmentation and categorization. The most difficult challenge in categorizing liver disease is distinguishing the liver from the other organs near it. Methodology. Liver biopsy is a kind of invasive diagnostic procedure, widely regarded as the gold standard for accurately estimating the severity of liver disease. Noninvasive approaches for examining liver illnesses, such as blood serum markers and medical imaging (ultrasound, magnetic resonance MR, and CT) have also been developed. This approach uses the Partial Differential Technique (PDT) to separate the liver from the other organs and Level Set Methodology (LSM) for separating the cancer location from the surrounding tissue based on the projected pictures used as input. With the help of an Improved Convolutional Classifier, the categorization of different phases may be accomplished. Results Several accuracies, sensitivity, and specificity measurements are produced to assess the categorization of LSM using an Improved Convolutional classifier. Approximately, 97.5% of the performance accuracy of the liver categorization is achieved with a 94.5% continuous interval (CI) of [0.6775 1.0000] and an error rate of 2.1%. The suggested method's performance is compared to that of two existing algorithms, and the sensitivity and specificity provide an overall average of 96% and 93%, respectively, with 95% Continuous Interval of [0.7513 1.0000] and [0.7126 1.0000] for sensitivity and specificity, respectively.
Collapse
|
25
|
Voss A, Schroeder R, Schulz S, Haueisen J, Vogler S, Horn P, Stallmach A, Reuken P. Detection of Liver Dysfunction Using a Wearable Electronic Nose System Based on Semiconductor Metal Oxide Sensors. BIOSENSORS 2022; 12:bios12020070. [PMID: 35200331 PMCID: PMC8869535 DOI: 10.3390/bios12020070] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Revised: 01/21/2022] [Accepted: 01/24/2022] [Indexed: 05/04/2023]
Abstract
The purpose of this exploratory study was to determine whether liver dysfunction can be generally classified using a wearable electronic nose based on semiconductor metal oxide (MOx) gas sensors, and whether the extent of this dysfunction can be quantified. MOx gas sensors are attractive because of their simplicity, high sensitivity, low cost, and stability. A total of 30 participants were enrolled, 10 of them being healthy controls, 10 with compensated cirrhosis, and 10 with decompensated cirrhosis. We used three sensor modules with a total of nine different MOx layers to detect reducible, easily oxidizable, and highly oxidizable gases. The complex data analysis in the time and non-linear dynamics domains is based on the extraction of 10 features from the sensor time series of the extracted breathing gas measurement cycles. The sensitivity, specificity, and accuracy for distinguishing compensated and decompensated cirrhosis patients from healthy controls was 1.00. Patients with compensated and decompensated cirrhosis could be separated with a sensitivity of 0.90 (correctly classified decompensated cirrhosis), a specificity of 1.00 (correctly classified compensated cirrhosis), and an accuracy of 0.95. Our wearable, non-invasive system provides a promising tool to detect liver dysfunctions on a functional basis. Therefore, it could provide valuable support in preoperative examinations or for initial diagnosis by the general practitioner, as it provides non-invasive, rapid, and cost-effective analysis results.
Collapse
Affiliation(s)
- Andreas Voss
- Institute of Innovative Health Technologies IGHT, Ernst-Abbe-Hochschule Jena, 07745 Jena, Germany; (R.S.); (S.S.)
- Institute of Biomedical Engineering and Informatics (BMTI), Technische Universität Ilmenau, 98693 Ilmenau, Germany;
- Correspondence: ; Tel.: +49-3677-69-2861
| | - Rico Schroeder
- Institute of Innovative Health Technologies IGHT, Ernst-Abbe-Hochschule Jena, 07745 Jena, Germany; (R.S.); (S.S.)
- UST Umweltsensortechnik GmbH, 99331 Geratal, Germany
| | - Steffen Schulz
- Institute of Innovative Health Technologies IGHT, Ernst-Abbe-Hochschule Jena, 07745 Jena, Germany; (R.S.); (S.S.)
| | - Jens Haueisen
- Institute of Biomedical Engineering and Informatics (BMTI), Technische Universität Ilmenau, 98693 Ilmenau, Germany;
| | - Stefanie Vogler
- Clinic for Internal Medicine IV, University Hospital Jena, 07747 Jena, Germany; (S.V.); (P.H.); (A.S.); (P.R.)
| | - Paul Horn
- Clinic for Internal Medicine IV, University Hospital Jena, 07747 Jena, Germany; (S.V.); (P.H.); (A.S.); (P.R.)
| | - Andreas Stallmach
- Clinic for Internal Medicine IV, University Hospital Jena, 07747 Jena, Germany; (S.V.); (P.H.); (A.S.); (P.R.)
| | - Philipp Reuken
- Clinic for Internal Medicine IV, University Hospital Jena, 07747 Jena, Germany; (S.V.); (P.H.); (A.S.); (P.R.)
| |
Collapse
|
26
|
Pareek V, Chaudhury S, Singh S. Handling non-stationarity in E-nose design: a review. SENSOR REVIEW 2022; 42:39-61. [DOI: 10.1108/sr-02-2021-0038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/19/2023]
Abstract
Purpose
The electronic nose is an array of chemical or gas sensors and associated with a pattern-recognition framework competent in identifying and classifying odorant or non-odorant and simple or complex gases. Despite more than 30 years of research, the robust e-nose device is still limited. Most of the challenges towards reliable e-nose devices are associated with the non-stationary environment and non-stationary sensor behaviour. Data distribution of sensor array response evolves with time, referred to as non-stationarity. The purpose of this paper is to provide a comprehensive introduction to challenges related to non-stationarity in e-nose design and to review the existing literature from an application, system and algorithm perspective to provide an integrated and practical view.
Design/methodology/approach
The authors discuss the non-stationary data in general and the challenges related to the non-stationarity environment in e-nose design or non-stationary sensor behaviour. The challenges are categorised and discussed with the perspective of learning with data obtained from the sensor systems. Later, the e-nose technology is reviewed with the system, application and algorithmic point of view to discuss the current status.
Findings
The discussed challenges in e-nose design will be beneficial for researchers, as well as practitioners as it presents a comprehensive view on multiple aspects of non-stationary learning, system, algorithms and applications for e-nose. The paper presents a review of the pattern-recognition techniques, public data sets that are commonly referred to as olfactory research. Generic techniques for learning in the non-stationary environment are also presented. The authors discuss the future direction of research and major open problems related to handling non-stationarity in e-nose design.
Originality/value
The authors first time review the existing literature related to learning with e-nose in a non-stationary environment and existing generic pattern-recognition algorithms for learning in the non-stationary environment to bridge the gap between these two. The authors also present details of publicly available sensor array data sets, which will benefit the upcoming researchers in this field. The authors further emphasise several open problems and future directions, which should be considered to provide efficient solutions that can handle non-stationarity to make e-nose the next everyday device.
Collapse
|
27
|
Wojnowski W, Kalinowska K. Machine Learning and Electronic Noses for Medical Diagnostics. Artif Intell Med 2022. [DOI: 10.1007/978-3-030-64573-1_329] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2023]
|
28
|
OKUBO S, OZEKI Y, YAMADA T, SAITO K, ISHIHARA N, YANAGIDA Y, MAYANAGI G, WASHIO J, TAKAHASHI N. Facile Fabrication of All-solid-state Ion-selective Electrodes by Laminating and Drop-casting for Multi-sensing. ELECTROCHEMISTRY 2022. [DOI: 10.5796/electrochemistry.22-00020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Affiliation(s)
- Shingo OKUBO
- Laboratory for Future Interdisciplinary Research of Science and Technology, Tokyo Institute of Technology
| | - Yoshihisa OZEKI
- Laboratory for Future Interdisciplinary Research of Science and Technology, Tokyo Institute of Technology
| | - Tetsuya YAMADA
- Laboratory for Future Interdisciplinary Research of Science and Technology, Tokyo Institute of Technology
| | - Kosuke SAITO
- Laboratory for Future Interdisciplinary Research of Science and Technology, Tokyo Institute of Technology
| | - Noboru ISHIHARA
- Laboratory for Future Interdisciplinary Research of Science and Technology, Tokyo Institute of Technology
| | - Yasuko YANAGIDA
- Laboratory for Future Interdisciplinary Research of Science and Technology, Tokyo Institute of Technology
| | - Gen MAYANAGI
- Division of Oral Ecology and Biochemistry, Tohoku University Graduate School of Dentistry
| | - Jumpei WASHIO
- Division of Oral Ecology and Biochemistry, Tohoku University Graduate School of Dentistry
| | - Nobuhiro TAKAHASHI
- Division of Oral Ecology and Biochemistry, Tohoku University Graduate School of Dentistry
| |
Collapse
|
29
|
Abuín-Porras V, Martinez-Perez C, Romero-Morales C, Cano-de-la-Cuerda R, Martín-Casas P, Palomo-López P, Sánchez-Tena MÁ. Citation Network Study on the Use of New Technologies in Neurorehabilitation. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 19:26. [PMID: 35010288 PMCID: PMC8751120 DOI: 10.3390/ijerph19010026] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 12/13/2021] [Accepted: 12/13/2021] [Indexed: 06/14/2023]
Abstract
New technologies in neurorehabilitation is a wide concept that intends to find solutions for individual and collective needs through technical systems. Analysis through citation networks is used to search scientific literature related to a specific topic. On the one hand, the main countries, institutions, and authors researching this topic have been identified, as well as their evolution over time. On the other hand, the links between the authors, the countries, and the topics under research have been analyzed. The publications analysis was performed through the Web of Science database using the search terms "new technolog*," "neurorehabilitation," "physical therapy*," and "occupational therapy*." The selected interval of publication was from 1992 to December 2020. The results were analyzed using CitNetExplorer software. After a Web of Science search, a total of 454 publications and 135 citation networks were found, 1992 being the first year of publication. An exponential increase was detected from the year 2009. The largest number was detected in 2020. The main areas are rehabilitation and neurosciences and neurology. The most cited article was from Perry et al. in 2007, with a citation index of 460. The analysis of the top 20 most cited articles shows that most approach the use of robotic devices and brain-computer interface systems. In conclusion, the main theme was found to be the use of robotic devices to address neuromuscular rehabilitation goals and brain-computer interfaces and their applications in neurorehabilitation.
Collapse
Affiliation(s)
- Vanesa Abuín-Porras
- Faculty of Sport Sciences, Universidad Europea de Madrid, 28670 Madrid, Spain;
- Fundación DACER, Área de I+D+I, San Sebastián de los Reyes, 28702 Madrid, Spain
| | - Clara Martinez-Perez
- ISEC LISBOA—Instituto Superior de Educação e Ciências, 1750-179 Lisboa, Portugal; (C.M.-P.); (M.Á.S.-T.)
| | | | - Roberto Cano-de-la-Cuerda
- Department of Physiotherapy, Occupational Therapy, Rehabilitation and Physical Medicine, Faculty of Health Sciences, Rey Juan Carlos University, 28922 Madrid, Spain;
| | - Patricia Martín-Casas
- Department of Radiology, Rehabilitation and Physiotherapy, Faculty of Nursing, Physiotherapy and Podiatry, Complutense University of Madrid, IdISSC, 28040 Madrid, Spain;
| | | | - Miguel Ángel Sánchez-Tena
- ISEC LISBOA—Instituto Superior de Educação e Ciências, 1750-179 Lisboa, Portugal; (C.M.-P.); (M.Á.S.-T.)
- Department of Optometry and Vision, Faculty of Optics and Optometry, Universidad Complutense de Madrid, 28037 Madrid, Spain
| |
Collapse
|
30
|
Application of E-nose combined with ANN modelling for qualitative and quantitative analysis of benzoic acid in cola-type beverages. JOURNAL OF FOOD MEASUREMENT AND CHARACTERIZATION 2021. [DOI: 10.1007/s11694-021-01083-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
|
31
|
The Potential Use of Volatile Biomarkers for Malaria Diagnosis. Diagnostics (Basel) 2021; 11:diagnostics11122244. [PMID: 34943481 PMCID: PMC8700171 DOI: 10.3390/diagnostics11122244] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2021] [Revised: 11/23/2021] [Accepted: 11/24/2021] [Indexed: 11/23/2022] Open
Abstract
Pathogens may change the odor and odor-related biting behavior of the vector and host to enhance pathogen transmission. In recent years, volatile biomarker investigations have emerged to identify odors that are differentially and specifically released by pathogens and plants, or the pathogen-infected or even cancer patients. Several studies have reported odors or volatile biomarkers specifically detected from the breath and skin of malaria-infected individuals. This review will discuss the potential use of these odors or volatile biomarkers for the diagnosis of malaria. This approach not only allows for the non-invasive mean of sample collection but also opens up the opportunity to develop a biosensor for malaria diagnosis in low-resource settings.
Collapse
|
32
|
Johnson AC, Buchanan EP, Khechoyan DY. Wound infection: A review of qualitative and quantitative assessment modalities. J Plast Reconstr Aesthet Surg 2021; 75:1287-1296. [PMID: 35216936 DOI: 10.1016/j.bjps.2021.11.060] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Revised: 05/26/2021] [Accepted: 11/12/2021] [Indexed: 12/20/2022]
Abstract
Surgical site infections (SSI) and chronic wounds represent a burden to patients and the health care system. One in 24 surgical patients will develop an SSI, making SSI the most common nosocomial infection in the USA. Early detection and monitoring of wound infection are critical for timely healing and return to normal function. However, the mainstay of wound infection diagnostic entails subjective clinical examination and semi-quantitative, invasive microbiological tests. In this review, we present current wound infection assessment modalities in the clinical and translational fields. There is a need for a point-of-care assessment tool that provides fast, accurate, and quantitative information on wound status, with minimal to no contact with the patient. In the next ten years, the evolution of wound diagnostic tools reported here may allow medical providers to optimize patient care while minimizing patient discomfort.
Collapse
Affiliation(s)
- Ariel C Johnson
- Division of Plastic and Reconstructive Surgery, University of Colorado Anschutz Medical Campus, Aurora, CO, USA
| | - Edward P Buchanan
- Division of Plastic Surgery, Michael E. DeBakey Department of Surgery, Baylor College of Medicine, Houston, TX, USA; Division of Plastic Surgery, Department of Surgery, Texas Children's Hospital, Houston, TX, USA
| | - David Y Khechoyan
- Department of Pediatric Plastic Surgery, Children's Hospital Colorado, Aurora, CO, USA.
| |
Collapse
|
33
|
van der Sar IG, Moor CC, Oppenheimer JC, Luijendijk ML, van Daele PLA, Maitland-van der Zee AH, Brinkman P, Wijsenbeek MS. Diagnostic performance of electronic nose technology in sarcoidosis. Chest 2021; 161:738-747. [PMID: 34756945 PMCID: PMC8941620 DOI: 10.1016/j.chest.2021.10.025] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Revised: 09/28/2021] [Accepted: 10/12/2021] [Indexed: 10/28/2022] Open
Abstract
BACKGROUND Diagnosing sarcoidosis can be challenging, and a non-invasive diagnostic method is lacking. The electronic nose (eNose) profiles volatile organic compounds in exhaled breath, and has potential as a point-of-care diagnostic tool. RESEARCH QUESTION Can we use eNose technology to distinguish accurately between sarcoidosis, interstitial lung disease (ILD) and healthy controls, and between sarcoidosis subgroups? STUDY DESIGN AND METHODS In this cross-sectional study, exhaled breath of patients with sarcoidosis, ILD, and healthy controls was analyzed using an eNose (SpiroNose). Clinical characteristics were collected from medical files. Partial least square discriminant and ROC analysis was applied to a training and independent validation cohort. RESULTS We included 252 patients with sarcoidosis, 317 with ILD and 48 healthy controls. In the validation cohorts, eNose distinguished sarcoidosis from controls with an AUC of 1.00, and pulmonary sarcoidosis from other ILD (AUC 0.87 (0.82-0.93)) and hypersensitivity pneumonitis (AUC 0.88 (0.75-1.00)). Exhaled breath of sarcoidosis patients with and without pulmonary involvement, pulmonary fibrosis, multiple organ involvement, pathology supported diagnosis, and immunosuppressive treatment showed no distinctive differences. Breath profiles differed between patients with a slightly and highly elevated soluble interleukin-2 receptor level (median cut off 772.0 U/mL; AUC 0.78 (0.64-0.92)). INTERPRETATION Patients with sarcoidosis can be distinguished from ILD and healthy controls using eNose technology, indicating that this may facilitate accurate diagnosis in the future. Further research is warranted to understand the value of eNose in monitoring sarcoidosis activity.
Collapse
Affiliation(s)
- I G van der Sar
- Department of Respiratory Medicine, Erasmus Medical Center, Rotterdam, the Netherlands
| | - C C Moor
- Department of Respiratory Medicine, Erasmus Medical Center, Rotterdam, the Netherlands
| | - J C Oppenheimer
- Department of Respiratory Medicine, Erasmus Medical Center, Rotterdam, the Netherlands
| | - M L Luijendijk
- Department of Respiratory Medicine, Erasmus Medical Center, Rotterdam, the Netherlands
| | - P L A van Daele
- Department of Immunology, Erasmus Medical Center, Rotterdam, the Netherlands
| | - A H Maitland-van der Zee
- Department of Respiratory Medicine, Amsterdam University Medical Center, Amsterdam, the Netherlands
| | - P Brinkman
- Department of Respiratory Medicine, Amsterdam University Medical Center, Amsterdam, the Netherlands
| | - M S Wijsenbeek
- Department of Respiratory Medicine, Erasmus Medical Center, Rotterdam, the Netherlands.
| |
Collapse
|
34
|
V A B, Subramoniam M, Mathew L. Detection of COPD and Lung Cancer with electronic nose using ensemble learning methods. Clin Chim Acta 2021; 523:231-238. [PMID: 34627826 DOI: 10.1016/j.cca.2021.10.005] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2021] [Revised: 09/30/2021] [Accepted: 10/04/2021] [Indexed: 10/20/2022]
Abstract
BACKGROUND AND AIMS The chemical gas sensor array based electronic-nose (e-nose) devices with machine learning algorithms can detect and differentiate expelled breath samples of patients with various respiratory ailments and controls. It is by the recognition of levels and variations of volatile organic compounds (VOC) in the exhaled air. Here, we aimed to differentiate chronic obstructive pulmonary disease (COPD) and lung cancer from controls. MATERIALS AND METHODS This work presents the details of the developed e-nose system, selection of the study subjects, exhaled breath sampling method and detection, and the data analysis algorithms. The developed device is tested in 199 participants including 93 controls, 55 COPD patients, and 51 lung cancer patients. The main advantage of the device is robustness and portability and cost-effectiveness. RESULTS In the training phase and model validation phase, the ensemble learning method XGBoost outperformed the other two models. In the prediction of lung cancer, XGBoost method attained a classification accuracy of 79.31%. In COPD prediction also the same method had given the better results with 76.67% accuracy. CONCLUSION The e-nose system developed with TGS gas sensors was portable, low cost, and gave a rapid response. It has been demonstrated that the VOC profiles of patients with pulmonary diseases and healthy controls are different and hence the e-nose system can be used as a potential diagnostic device for patients with lung diseases.
Collapse
Affiliation(s)
- Binson V A
- Department of Electronics Engineering, Sathyabama Institute of Science and Technology, Tamil Nadu, India; Department of Electronics Engineering, Saintgits College of Engineering, Kerala, India.
| | - M Subramoniam
- Department of Electronics Engineering, Sathyabama Institute of Science and Technology, Tamil Nadu, India
| | - Luke Mathew
- Department of Pulmonology, Believers Church Medical College Hospital, Thiruvalla, Kerala, India
| |
Collapse
|
35
|
Performance Analysis of MAU-9 Electronic-Nose MOS Sensor Array Components and ANN Classification Methods for Discrimination of Herb and Fruit Essential Oils. CHEMOSENSORS 2021. [DOI: 10.3390/chemosensors9090243] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
The recent development of MAU-9 electronic sensory methods, based on artificial olfaction detection of volatile emissions using an experimental metal oxide semiconductor (MOS)-type electronic-nose (e-nose) device, have provided novel means for the effective discovery of adulterated and counterfeit essential oil-based plant products sold in worldwide commercial markets. These new methods have the potential of facilitating enforcement of regulatory quality assurance (QA) for authentication of plant product genuineness and quality through rapid evaluation by volatile (aroma) emissions. The MAU-9 e-nose system was further evaluated using performance-analysis methods to determine ways for improving on overall system operation and effectiveness in discriminating and classifying volatile essential oils derived from fruit and herbal edible plants. Individual MOS-sensor components in the e-nose sensor array were performance tested for their effectiveness in contributing to discriminations of volatile organic compounds (VOCs) analyzed in headspace from purified essential oils using artificial neural network (ANN) classification. Two additional statistical data-analysis methods, including principal regression (PR) and partial least squares (PLS), were also compared. All statistical methods tested effectively classified essential oils with high accuracy. Aroma classification with PLS method using 2 optimal MOS sensors yielded much higher accuracy than using all nine sensors. The accuracy of 2-group and 6-group classifications of essentials oils by ANN was 100% and 98.9%, respectively.
Collapse
|
36
|
Noninvasive detection of COPD and Lung Cancer through breath analysis using MOS Sensor array based e-nose. Expert Rev Mol Diagn 2021; 21:1223-1233. [PMID: 34415806 DOI: 10.1080/14737159.2021.1971079] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
INTRODUCTION This paper describes the research work done toward the development of a breath analyzing electronic nose (e-nose), and the results obtained from testing patients with lung cancer, patients with chronic obstructive pulmonary disease (COPD), and healthy controls. Pulmonary diseases like COPD and lung cancer are detected with MOS sensor array-based e-noses. The e-nose device with the sensor array, data acquisition system, and pattern recognition can detect the variations of volatile organic compounds (VOC) present in the expelled breath of patients and healthy controls. MATERIALS AND METHODS This work presents the e-nose equipment design, study subjects selection, breath sampling procedures, and various data analysis tools. The developed e-nose system is tested in 40 patients with lung cancer, 48 patients with COPD, and 90 healthy controls. RESULTS In differentiating lung cancer and COPD from controls, support vector machine (SVM) with 3-fold cross-validation outperformed all other classifiers with an accuracy of 92.3% in cross-validation. In external validation, the same discrimination was achieved by k-nearest neighbors (k-NN) with 75.0% accuracy. CONCLUSION The reported results show that the VOC analysis with an e-nose system holds exceptional possibilities in noninvasive disease diagnosis applications.
Collapse
|
37
|
Metabolic Phenotypes in Asthmatic Adults: Relationship with Inflammatory and Clinical Phenotypes and Prognostic Implications. Metabolites 2021; 11:metabo11080534. [PMID: 34436475 PMCID: PMC8400680 DOI: 10.3390/metabo11080534] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Revised: 08/03/2021] [Accepted: 08/05/2021] [Indexed: 12/26/2022] Open
Abstract
Bronchial asthma is a chronic disease that affects individuals of all ages. It has a high prevalence and is associated with high morbidity and considerable levels of mortality. However, asthma is not a single disease, and multiple subtypes or phenotypes (clinical, inflammatory or combinations thereof) can be detected, namely in aggregated clusters. Most studies have characterised asthma phenotypes and clusters of phenotypes using mainly clinical and inflammatory parameters. These studies are important because they may have clinical and prognostic implications and may also help to tailor personalised treatment approaches. In addition, various metabolomics studies have helped to further define the metabolic features of asthma, using electronic noses or targeted and untargeted approaches. Besides discriminating between asthma and a healthy state, metabolomics can detect the metabolic signatures associated with some asthma subtypes, namely eosinophilic and non-eosinophilic phenotypes or the obese asthma phenotype, and this may prove very useful in point-of-care application. Furthermore, metabolomics also discriminates between asthma and other “phenotypes” of chronic obstructive airway diseases, such as chronic obstructive pulmonary disease (COPD) or Asthma–COPD Overlap (ACO). However, there are still various aspects that need to be more thoroughly investigated in the context of asthma phenotypes in adequately designed, homogeneous, multicentre studies, using adequate tools and integrating metabolomics into a multiple-level approach.
Collapse
|
38
|
Inamdar AA, Morath S, Bennett JW. Fungal Volatile Organic Compounds: More Than Just a Funky Smell? Annu Rev Microbiol 2021; 74:101-116. [PMID: 32905756 DOI: 10.1146/annurev-micro-012420-080428] [Citation(s) in RCA: 47] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Many volatile organic compounds (VOCs) associated with industry cause adverse health effects, but less is known about the physiological effects of biologically produced volatiles. This review focuses on the VOCs emitted by fungi, which often have characteristic moldy or "mushroomy" odors. One of the most common fungal VOCs, 1-octen-3-ol, is a semiochemical for many arthropod species and also serves as a developmental hormone for several fungal groups. Other fungal VOCs are flavor components of foods and spirits or are assayed in indirect methods for detecting the presence of mold in stored agricultural produce and water-damaged buildings. Fungal VOCs function as antibiotics as well as defense and plant-growth-promoting agents and have been implicated in a controversial medical condition known as sick building syndrome. In this review, we draw attention to the ubiquity, diversity, and toxicological significance of fungal VOCs as well as some of their ecological roles.
Collapse
Affiliation(s)
- Arati A Inamdar
- Department of Pathology, RWJ Barnabas Health, Livingston, New Jersey 07039, USA;
| | - Shannon Morath
- Department of Plant Biology, Rutgers, The State University of New Jersey, New Brunswick, New Jersey 08901, USA; ,
| | - Joan W Bennett
- Department of Plant Biology, Rutgers, The State University of New Jersey, New Brunswick, New Jersey 08901, USA; ,
| |
Collapse
|
39
|
Yang Y, Wei L. Application of E-nose technology combined with artificial neural network to predict total bacterial count in milk. J Dairy Sci 2021; 104:10558-10565. [PMID: 34304876 DOI: 10.3168/jds.2020-19987] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Accepted: 06/02/2021] [Indexed: 11/19/2022]
Abstract
Total bacterial count (TBC) is a widely accepted index for assessing microbial quality of milk, and cultivation-based methods are commonly used as standard methods for its measurement. However, these methods are laborious and time-consuming. This study proposes a method combining E-nose technology and artificial neural network for rapid prediction of TBC in milk. The qualitative model generated an accuracy rate of 100% when identifying milk samples with high, medium, or low levels of TBC, on both the testing and validating subsets. Predicted TBC values generated by the quantitative model demonstrated strong coefficient of multiple determination (R2 > 0.99) with reference values. Mean relative difference between predicted and reference values (mean ± standard deviation) of TBC were 1.1 ± 1.7% and 0.4 ± 0.8% on the testing and validating subsets involving 24 and 28 tested samples, respectively. Paired t-test implied that the difference between predicted and reference values of TBC was insignificant for both the testing and validating subsets. As low as ∼1 log cfu/mL of TBC present in tested samples were precisely predicted. Results of this study indicated that combination of E-nose technology and artificial neural network generated reliable predictions of TBC in milk. The method proposed in this study was reliable, rapid, and cost efficient for assessing microbial quality milk, and thus would potentially have realistic application in dairy section.
Collapse
Affiliation(s)
- Yongheng Yang
- School of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, China, 310023; School of Ocean Science and Technology, Dalian University of Technology, Liaoning, China, 124221.
| | - Lijuan Wei
- Instrumental Analysis and Research Center, Dalian University of Technology, Liaoning, China, 124221
| |
Collapse
|
40
|
Sharma D, Rai R. Neoteric advancements in TB diagnostics and its future frame. Indian J Tuberc 2021; 68:313-320. [PMID: 34099195 DOI: 10.1016/j.ijtb.2020.10.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Revised: 09/25/2020] [Accepted: 10/09/2020] [Indexed: 06/12/2023]
Abstract
Tuberculosis (TB) is one of the major infectious disease that causes threat to human health and leads to death in most of the cases. Mycobacterium tuberculosis is the causative agent that can affect both pulmonary and extra pulmonary regions of the body. This infection can be presented either as an active or latent form in the patients. Although this disease has been declared curable and preventable by WHO, it still holds its position as a global emergency. Over the past decade many hurdles such as low immunity, co-infections like HIV, autoimmune disorders, poverty, malnutrition and emerging trends in drug resistance patterns are hindering the eradication of this infection. However, many programmes have been launched by WHO with involvement of governments at various level to put a full stop over the disease. Under the Revised National Tuberculosis Control Programme (RNTCP) which was recently renamed as National Tuberculosis Elimination Programme (NTEP), the major focus is on eliminating tuberculosis by the year 2025. The main aim of the programme is to identify feasible quality testing, evaluate through NIKSHYA poshak yozana, restrict through BCG vaccination and assemble with public awareness to eradicate MTB. Numerous novel diagnostic techniques and molecular tools have been developed to elucidate and differentiate report of various suspected and active tuberculosis patients. However, improvements are still required to cut short the duration of the overall process ranging from screening of patients to their successful treatment.
Collapse
Affiliation(s)
- Diksha Sharma
- Department of Biotechnology, DAV College, Jalandhar, 144008, Punjab, India
| | - Rohit Rai
- Department of Medical Laboratory Sciences, Lovely Professional University, Phagwara, 144411, Punjab, India.
| |
Collapse
|
41
|
Exhaled-Breath Testing Using an Electronic Nose during Spinal Cord Stimulation in Patients with Failed Back Surgery Syndrome: An Experimental Pilot Study. J Clin Med 2021; 10:jcm10132921. [PMID: 34209972 PMCID: PMC8269089 DOI: 10.3390/jcm10132921] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2021] [Revised: 06/17/2021] [Accepted: 06/29/2021] [Indexed: 11/17/2022] Open
Abstract
The increased awareness of discrepancies between self-reporting outcome measurements and objective outcome measurements within the field of neuromodulation has accelerated the search towards more objective measurements. The aim of this study was to evaluate whether an electronic nose can differentiate between chronic pain patients in whom Spinal Cord Stimulation (SCS) was activated versus deactivated. Twenty-seven patients with Failed Back Surgery Syndrome (FBSS) participated in this prospective pilot study. Volatile organic compounds in exhaled breath were measured with electronic nose technology (Aeonose™) during SCS on and off states. Random forest was used with a leave-10%-out cross-validation method to determine accuracy of discriminating between SCS on and off states. Our random forest showed an accuracy of 0.56, with an area under the curve of 0.62, a sensitivity of 62% (95% CI: 41–79%) and a specificity of 50% (95% CI: 30–70%). Pain intensity scores were significantly different between both SCS states. Our findings indicate that we cannot discriminate between SCS off and on states based on exhaled breath with the Aeonose™ in patients with FBSS. In clinical practice, these findings imply that with a noninvasive electronic nose, exhaled breath cannot be used as an additional marker of the effect of neuromodulation.
Collapse
|
42
|
Yamanaka HR, Cheung C, Mendoza JS, Oliva DJ, Elzey-Aberilla K, Perrault KA. Pilot Study on Exhaled Breath Analysis for a Healthy Adult Population in Hawaii. Molecules 2021; 26:molecules26123726. [PMID: 34207244 PMCID: PMC8234827 DOI: 10.3390/molecules26123726] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2021] [Revised: 06/09/2021] [Accepted: 06/14/2021] [Indexed: 02/01/2023] Open
Abstract
Fast diagnostic results using breath analysis are an anticipated possibility for disease diagnosis or general health screenings. Tests that do not require sending specimens to medical laboratories possess capabilities to speed patient diagnosis and protect both patient and healthcare staff from unnecessary prolonged exposure. The objective of this work was to develop testing procedures on an initial healthy subject cohort in Hawaii to act as a range-finding pilot study for characterizing the baseline of exhaled breath prior to further research. Using comprehensive two-dimensional gas chromatography (GC×GC), this study analyzed exhaled breath from a healthy adult population in Hawaii to profile the range of different volatile organic compounds (VOCs) and survey Hawaii-specific differences. The most consistently reported compounds in the breath profile of individuals were acetic acid, dimethoxymethane, benzoic acid methyl ester, and n-hexane. In comparison to other breathprinting studies, the list of compounds discovered was representative of control cohorts. This must be considered when implementing proposed breath diagnostics in new locations with increased interpersonal variation due to diversity. Further studies on larger numbers of subjects over longer periods of time will provide additional foundational data on baseline breath VOC profiles of control populations for comparison to disease-positive cohorts.
Collapse
|
43
|
Segreti A, Incalzi RA, Lombardi M, Miglionico M, Nusca A, Pennazza G, Santonico M, Grasso S, Grigioni F, Di Sciascio G. Characterization of inflammatory profile by breath analysis in chronic coronary syndromes. J Cardiovasc Med (Hagerstown) 2021; 21:675-681. [PMID: 32740499 DOI: 10.2459/jcm.0000000000001032] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
AIMS Exhaled breath contains thousands of volatile organic compounds (VOCs) produced during various metabolic processes both in health and disease.Analysis of breath with electronic nose BIONOTE-V allows modifications of exhaled VOCs to be studied, which are clinically recognized to be a marker for several disorders, including heart failure. New noninvasive tests based on VOCs analysis might be a useful tool for early detection of chronic coronary syndromes (CCS). METHODS Exhaled air was collected and measured in individuals with an indication to perform invasive coronary angiography (ICA). All patients' samples were obtained before ICA. RESULTS Analysis with BIONOTE-V was performed in a total cohort of 42 patients consecutively enrolled, of whom 19 did not require myocardial revascularization and 23 with indication for myocardial revascularization. BIONOTE-V was able to correctly identify 18 out of 23 patients affected by severe coronary artery disease (sensitivity = 78.3% and specificity = 68.4%). Our predicted model had a tight correlation with SYNTAX score (error of the BIONOTE-V = 15). CONCLUSION CCS patients have a distinctive fingerprint of exhaled breath, and analysis by BIONOTE-V has the potential for identifying these patients. Moreover, it seems that this technique can correctly identify patients according to anatomical disease severity at ICA. If the preliminary data of this proof of concept study will be confirmed, this rapid and noninvasive diagnostic tool able to identify CCS might have an impact in routine clinical practice.
Collapse
Affiliation(s)
| | | | | | | | | | - Giorgio Pennazza
- Unit of Cardiovascular Sciences, Campus Bio-Medico University of Rome, Rome, Italy
| | - Marco Santonico
- Unit of Electronics for Sensor Systems, Department of Science and Technology for Humans and the Environment, Campus Bio-Medico University of Rome, Rome, Italy
| | - Simone Grasso
- Unit of Electronics for Sensor Systems, Department of Science and Technology for Humans and the Environment, Campus Bio-Medico University of Rome, Rome, Italy
| | | | | |
Collapse
|
44
|
Huang Y, Doh IJ, Bae E. Design and Validation of a Portable Machine Learning-Based Electronic Nose. SENSORS 2021; 21:s21113923. [PMID: 34200440 PMCID: PMC8201040 DOI: 10.3390/s21113923] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/06/2021] [Revised: 06/03/2021] [Accepted: 06/04/2021] [Indexed: 11/16/2022]
Abstract
Volatile organic compounds (VOCs) are chemicals emitted by various groups, such as foods, bacteria, and plants. While there are specific pathways and biological features significantly related to such VOCs, detection of these is achieved mostly by human odor testing or high-end methods such as gas chromatography-mass spectrometry that can analyze the gaseous component. However, odor characterization can be quite helpful in the rapid classification of some samples in sufficient concentrations. Lower-cost metal-oxide gas sensors have the potential to allow the same type of detection with less training required. Here, we report a portable, battery-powered electronic nose system that utilizes multiple metal-oxide gas sensors and machine learning algorithms to detect and classify VOCs. An in-house circuit was designed with ten metal-oxide sensors and voltage dividers; an STM32 microcontroller was used for data acquisition with 12-bit analog-to-digital conversion. For classification of target samples, a supervised machine learning algorithm such as support vector machine (SVM) was applied to classify the VOCs based on the measurement results. The coefficient of variation (standard deviation divided by mean) of 8 of the 10 sensors stayed below 10%, indicating the excellent repeatability of these sensors. As a proof of concept, four different types of wine samples and three different oil samples were classified, and the training model reported 100% and 98% accuracy based on the confusion matrix analysis, respectively. When the trained model was challenged against new sets of data, sensitivity and specificity of 98.5% and 98.6% were achieved for the wine test and 96.3% and 93.3% for the oil test, respectively, when the SVM classifier was used. These results suggest that the metal-oxide sensors are suitable for usage in food authentication applications.
Collapse
|
45
|
Fully integrated ultra-sensitive electronic nose based on organic field-effect transistors. Sci Rep 2021; 11:10683. [PMID: 34021171 PMCID: PMC8140082 DOI: 10.1038/s41598-021-88569-x] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Accepted: 04/12/2021] [Indexed: 12/21/2022] Open
Abstract
Modern solid-state gas sensors approaching ppb-level limit of detection open new perspectives for process control, environmental monitoring and exhaled breath analysis. Organic field-effect transistors (OFETs) are especially promising for gas sensing due to their outstanding sensitivities, low cost and small power consumption. However, they suffer of poor selectivity, requiring development of cross-selective arrays to distinguish analytes, and environmental instability, especially in humid air. Here we present the first fully integrated OFET-based electronic nose with the whole sensor array located on a single substrate. It features down to 30 ppb limit of detection provided by monolayer thick active layers and operates in air with up to 95% relative humidity. By means of principal component analysis, it is able to discriminate toxic air pollutants and monitor meat product freshness. The approach presented paves the way for developing affordable air sensing networks for the Internet of Things.
Collapse
|
46
|
Dragonieri S, Quaranta VN, Carratù P, Ranieri T, Buonamico E, Carpagnano GE. Breathing Rhythm Variations during Wash-In Do Not Influence Exhaled Volatile Organic Compound Profile Analyzed by an Electronic Nose. Molecules 2021; 26:molecules26092695. [PMID: 34064506 PMCID: PMC8124182 DOI: 10.3390/molecules26092695] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2021] [Revised: 04/21/2021] [Accepted: 05/03/2021] [Indexed: 11/24/2022] Open
Abstract
E-noses are innovative tools used for exhaled volatile organic compound (VOC) analysis, which have shown their potential in several diseases. Before obtaining a full validation of these instruments in clinical settings, a number of methodological issues still have to be established. We aimed to assess whether variations in breathing rhythm during wash-in with VOC-filtered air before exhaled air collection reflect changes in the exhaled VOC profile when analyzed by an e-nose (Cyranose 320). We enrolled 20 normal subjects and randomly collected their exhaled breath at three different breathing rhythms during wash-in: (a) normal rhythm (respiratory rate (RR) between 12 and 18/min), (b) fast rhythm (RR > 25/min) and (c) slow rhythm (RR < 10/min). Exhaled breath was collected by a previously validated method (Dragonieri et al., J. Bras. Pneumol. 2016) and analyzed by the e-nose. Using principal component analysis (PCA), no significant variations in the exhaled VOC profile were shown among the three breathing rhythms. Subsequent linear discriminant analysis (LDA) confirmed the above findings, with a cross-validated accuracy of 45% (p = ns). We concluded that the exhaled VOC profile, analyzed by an e-nose, is not influenced by variations in breathing rhythm during wash-in.
Collapse
Affiliation(s)
- Silvano Dragonieri
- Respiratory Diseases, University of Bari, 70121 Bari, Italy; (T.R.); (E.B.); (G.E.C.)
- Correspondence:
| | | | - Pierluigi Carratù
- Internal Medicine “A. Murri”, University of Bari, 70121 Bari, Italy;
| | - Teresa Ranieri
- Respiratory Diseases, University of Bari, 70121 Bari, Italy; (T.R.); (E.B.); (G.E.C.)
| | - Enrico Buonamico
- Respiratory Diseases, University of Bari, 70121 Bari, Italy; (T.R.); (E.B.); (G.E.C.)
| | | |
Collapse
|
47
|
Foo LH, Balan P, Pang LM, Laine ML, Seneviratne CJ. Role of the oral microbiome, metabolic pathways, and novel diagnostic tools in intra-oral halitosis: a comprehensive update. Crit Rev Microbiol 2021; 47:359-375. [PMID: 33653206 DOI: 10.1080/1040841x.2021.1888867] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Halitosis or oral malodor is one of the most common reasons for the patients' visit to the dental clinic, ranking behind only dental caries and periodontitis. In the present times, where social and professional communications are becoming unavoidable, halitosis has become a concern of growing importance. Oral malodor mostly develops due to the putrefaction of substrates by the indigenous bacterial populations. Although culture-based studies have provided adequate information on halitosis, the high throughput omics technologies have amplified the resolution at which oral microbial community can be examined and has led to the detection of a broader range of taxa associated with intra-oral halitosis (IOH). These microorganisms are regulated by the interactions of their ecological processes. Thus to develop effective treatment strategies, it is important to understand the microbial basis of halitosis. In the current review, we provide an update on IOH in context to the role of the oral microbiome, metabolic pathways involved, and novel diagnostic tools, including breathomics. Understanding oral microbiota associated with halitosis from a broader ecological perspective can provide novel insights into one's oral and systemic health. Such information can pave the way for the emergence of diagnostic tools that can revolutionize the early detection of halitosis and various associated medical conditions.
Collapse
Affiliation(s)
- Lean Heong Foo
- Department of Restorative Dentistry, Periodontic Unit, National Dental Centre Singapore, Singapore, Singapore.,Oral Health ACP, Duke NUS Medical School, Singapore, Singapore
| | - Preethi Balan
- Oral Health ACP, Duke NUS Medical School, Singapore, Singapore.,Singapore Oral Microbiomics Initiative (SOMI), National Dental Research Institute Singapore (NDRIS), National Dental Centre Singapore, Singapore, Singapore
| | - Li Mei Pang
- Singapore Oral Microbiomics Initiative (SOMI), National Dental Research Institute Singapore (NDRIS), National Dental Centre Singapore, Singapore, Singapore
| | - Marja L Laine
- Department of Periodontology, Academic Centre for Dentistry Amsterdam (ACTA), University of Amsterdam and VU University, Amsterdam, The Netherlands
| | - Chaminda Jayampath Seneviratne
- Oral Health ACP, Duke NUS Medical School, Singapore, Singapore.,Singapore Oral Microbiomics Initiative (SOMI), National Dental Research Institute Singapore (NDRIS), National Dental Centre Singapore, Singapore, Singapore
| |
Collapse
|
48
|
Machine Learning and Electronic Noses for Medical Diagnostics. Artif Intell Med 2021. [DOI: 10.1007/978-3-030-58080-3_329-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
|
49
|
Sánchez-Vicente C, Santos JP, Lozano J, Sayago I, Sanjurjo JL, Azabal A, Ruiz-Valdepeñas S. Graphene-Doped Tin Oxide Nanofibers and Nanoribbons as Gas Sensors to Detect Biomarkers of Different Diseases through the Breath. SENSORS 2020; 20:s20247223. [PMID: 33348560 PMCID: PMC7767173 DOI: 10.3390/s20247223] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Revised: 12/15/2020] [Accepted: 12/15/2020] [Indexed: 11/16/2022]
Abstract
This work presents the development of tin oxide nanofibers (NFs) and nanoribbons (NRs) sensors with graphene as a dopant for the detection of volatile organic compounds (VOCs) corresponding to different chronic diseases (asthma, chronic obstructive pulmonary disease, cystic fibrosis or diabetes). This research aims to determine the ability of these sensors to differentiate between gas samples corresponding to healthy people and patients with a disease. The nanostructures were grown by electrospinning and deposited on silicon substrates with micro-heaters integrated. The morphology of NFs and NRs was characterized by Scanning Electron Microscopy (SEM). A gas line was assembled and programmed to measure a wide range of gases (ethanol, acetone, NO and CO) at different concentrations simulating human breath conditions. Measurements were made in the presence and absence of humidity to evaluate its effect. The sensors were able to differentiate between the concentrations corresponding to a healthy person and a patient with one of the selected diseases. These were sensitive to biomarkers such as acetone and ethanol at low operating temperatures (with responses above 35%). Furthermore, CO and NO response was at high temperatures (above 5%). The sensors had a rapid response, with times of 50 s and recovery periods of about 10 min.
Collapse
Affiliation(s)
- Carlos Sánchez-Vicente
- Institute of Physics Technology and Information (CSIC), 28006 Madrid, Spain; (J.P.S.); (I.S.); (J.L.S.)
- Up Devices and Technologies, 28021 Madrid, Spain; (A.A.); (S.R.-V.)
- Correspondence:
| | - José Pedro Santos
- Institute of Physics Technology and Information (CSIC), 28006 Madrid, Spain; (J.P.S.); (I.S.); (J.L.S.)
| | - Jesús Lozano
- Industrial Engineering School, University of Extremadura, 06006 Badajoz, Spain;
| | - Isabel Sayago
- Institute of Physics Technology and Information (CSIC), 28006 Madrid, Spain; (J.P.S.); (I.S.); (J.L.S.)
| | - José Luis Sanjurjo
- Institute of Physics Technology and Information (CSIC), 28006 Madrid, Spain; (J.P.S.); (I.S.); (J.L.S.)
| | - Alfredo Azabal
- Up Devices and Technologies, 28021 Madrid, Spain; (A.A.); (S.R.-V.)
| | | |
Collapse
|
50
|
Loulier J, Lefort F, Stocki M, Asztemborska M, Szmigielski R, Siwek K, Grzywacz T, Hsiang T, Ślusarski S, Oszako T, Klisz M, Tarakowski R, Nowakowska JA. Detection of Fungi and Oomycetes by Volatiles Using E-Nose and SPME-GC/MS Platforms. Molecules 2020; 25:E5749. [PMID: 33291490 PMCID: PMC7730677 DOI: 10.3390/molecules25235749] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2020] [Revised: 12/03/2020] [Accepted: 12/04/2020] [Indexed: 01/18/2023] Open
Abstract
Fungi and oomycetes release volatiles into their environment which could be used for olfactory detection and identification of these organisms by electronic-nose (e-nose). The aim of this study was to survey volatile compound emission using an e-nose device and to identify released molecules through solid phase microextraction-gas chromatography/mass spectrometry (SPME-GC/MS) analysis to ultimately develop a detection system for fungi and fungi-like organisms. To this end, cultures of eight fungi (Armillaria gallica, Armillaria ostoyae, Fusarium avenaceum, Fusarium culmorum, Fusarium oxysporum, Fusarium poae, Rhizoctonia solani, Trichoderma asperellum) and four oomycetes (Phytophthora cactorum, P. cinnamomi, P. plurivora, P. ramorum) were tested with the e-nose system and investigated by means of SPME-GC/MS. Strains of F. poae, R. solani and T. asperellum appeared to be the most odoriferous. All investigated fungal species (except R. solani) produced sesquiterpenes in variable amounts, in contrast to the tested oomycetes strains. Other molecules such as aliphatic hydrocarbons, alcohols, aldehydes, esters and benzene derivatives were found in all samples. The results suggested that the major differences between respective VOC emission ranges of the tested species lie in sesquiterpene production, with fungi emitting some while oomycetes released none or smaller amounts of such molecules. Our e-nose system could discriminate between the odors emitted by P. ramorum, F. poae, T. asperellum and R. solani, which accounted for over 88% of the PCA variance. These preliminary results of fungal and oomycete detection make the e-nose device suitable for further sensor design as a potential tool for forest managers, other plant managers, as well as regulatory agencies such as quarantine services.
Collapse
Affiliation(s)
- Jérémie Loulier
- InTNE (Plants & Pathogens Group), Hepia, University of Applied Sciences and Arts of Western Switzerland, 150 route de Presinge, 1254 Jussy, Switzerland;
| | - François Lefort
- InTNE (Plants & Pathogens Group), Hepia, University of Applied Sciences and Arts of Western Switzerland, 150 route de Presinge, 1254 Jussy, Switzerland;
| | - Marcin Stocki
- Institute of Forest Sciences, Faculty of Civil Engineering and Environmental Sciences, Bialystok University of Technology, Wiejska 45E, 15-351 Bialystok, Poland; (M.S.); (T.O.)
| | - Monika Asztemborska
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland; (M.A.); (R.S.)
| | - Rafał Szmigielski
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland; (M.A.); (R.S.)
| | - Krzysztof Siwek
- Faculty of Electrical Engineering, Warsaw University of Technology, Koszykowa 75, 00-661 Warsaw, Poland; (K.S.); (T.G.)
| | - Tomasz Grzywacz
- Faculty of Electrical Engineering, Warsaw University of Technology, Koszykowa 75, 00-661 Warsaw, Poland; (K.S.); (T.G.)
| | - Tom Hsiang
- Environmental Sciences, University of Guelph, Guelph, ON N1G 2W1, Canada;
| | - Sławomir Ślusarski
- Forest Protection Department, Forest Research Institute, Braci Leśnej 3, 05-090 Sękocin Stary, Poland;
| | - Tomasz Oszako
- Institute of Forest Sciences, Faculty of Civil Engineering and Environmental Sciences, Bialystok University of Technology, Wiejska 45E, 15-351 Bialystok, Poland; (M.S.); (T.O.)
- Forest Protection Department, Forest Research Institute, Braci Leśnej 3, 05-090 Sękocin Stary, Poland;
| | - Marcin Klisz
- Department of Silviculture and Genetics, Forest Research Institute, Braci Leśnej 3, 05-090 Sękocin Stary, Poland;
| | - Rafał Tarakowski
- Faculty of Physics, Warsaw University of Technology, Koszykowa 75, 00-662 Warsaw, Poland;
| | - Justyna Anna Nowakowska
- Institute of Biological Sciences, Cardinal Stefan Wyszynski University in Warsaw, Wóycickiego 1/3 Street, 01-938 Warsaw, Poland
| |
Collapse
|