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Telangore H, Azad V, Sharma M, Bhurane A, Tan RS, Acharya UR. Early prediction of sudden cardiac death using multimodal fusion of ECG Features extracted from Hilbert-Huang and wavelet transforms with explainable vision transformer and CNN models. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2024; 257:108455. [PMID: 39447439 DOI: 10.1016/j.cmpb.2024.108455] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2024] [Revised: 09/21/2024] [Accepted: 10/02/2024] [Indexed: 10/26/2024]
Abstract
BACKGROUND AND OBJECTIVE Sudden cardiac death (SCD) is a critical health issue characterized by the sudden failure of heart function, often caused by ventricular fibrillation (VF). Early prediction of SCD is crucial to enable timely interventions. However, current methods predict SCD only a few minutes before its onset, limiting intervention time. This study aims to develop a deep learning-based model for the early prediction of SCD using electrocardiography (ECG) signals. METHODS A multimodal explainable deep learning-based model is developed to analyze ECG signals at discrete intervals ranging from 5 to 30 min before SCD onset. The raw ECG signals, 2D scalograms generated through wavelet transform and 2D Hilbert spectrum generated through Hilbert-Huang transform (HHT) of ECG signals were applied to multiple deep learning algorithms. For raw ECG, a combination of 1D-convolutional neural networks (1D-CNN) and long short-term memory networks were employed for feature extraction and temporal pattern recognition. Besides, to extract and analyze features from scalograms and Hilbert spectra, Vision Transformer (ViT) and 2D-CNN have been used. RESULTS The developed model achieved high performance, with accuracy, precision, recall and F1-score of 98.81%, 98.83%, 98.81%, and 98.81% respectively to predict SCD onset 30 min in advance. Further, the proposed model can accurately classify SCD patients and normal controls with 100% accuracy. Thus, the proposed method outperforms the existing state-of-the-art methods. CONCLUSIONS The developed model is capable of capturing diverse patterns on ECG signals recorded at multiple discrete time intervals (at 5-minute increments from 5 min to 30 min) prior to SCD onset that could discriminate for SCD. The proposed model significantly improves early SCD prediction, providing a valuable tool for continuous ECG monitoring in high-risk patients.
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Affiliation(s)
- Hardik Telangore
- Department of Electrical and Computer Science Engineering, Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad, Gujarat, 380026, India; Centre of Advanced Defence Technology, Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad, Gujarat, 380026, India.
| | - Victor Azad
- Department of Electrical and Computer Science Engineering, Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad, Gujarat, 380026, India.
| | - Manish Sharma
- Department of Electrical and Computer Science Engineering, Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad, Gujarat, 380026, India; Centre of Advanced Defence Technology, Institute of Infrastructure, Technology, Research and Management (IITRAM), Ahmedabad, Gujarat, 380026, India.
| | - Ankit Bhurane
- Department of Electronics and Communication Engineering, Visvesvaraya National Institute of Technology (VNIT), Nagpur, 440010, Maharashtra, India.
| | - Ru San Tan
- National Heart Centre, Singapore, 169609, Singapore; Duke-NUS Medical School, Singapore, 169857, Singapore.
| | - U Rajendra Acharya
- School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield, Australia; Centre for Health Research, University of Southern Queensland, Australia.
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Kolk MZH, Deb B, Ruipérez-Campillo S, Bhatia NK, Clopton P, Wilde AAM, Narayan SM, Knops RE, Tjong FVY. Machine learning of electrophysiological signals for the prediction of ventricular arrhythmias: systematic review and examination of heterogeneity between studies. EBioMedicine 2023; 89:104462. [PMID: 36773349 PMCID: PMC9945642 DOI: 10.1016/j.ebiom.2023.104462] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 01/19/2023] [Accepted: 01/19/2023] [Indexed: 02/11/2023] Open
Abstract
BACKGROUND Ventricular arrhythmia (VA) precipitating sudden cardiac arrest (SCD) is among the most frequent causes of death and pose a high burden on public health systems worldwide. The increasing availability of electrophysiological signals collected through conventional methods (e.g. electrocardiography (ECG)) and digital health technologies (e.g. wearable devices) in combination with novel predictive analytics using machine learning (ML) and deep learning (DL) hold potential for personalised predictions of arrhythmic events. METHODS This systematic review and exploratory meta-analysis assesses the state-of-the-art of ML/DL models of electrophysiological signals for personalised prediction of malignant VA or SCD, and studies potential causes of bias (PROSPERO, reference: CRD42021283464). Five electronic databases were searched to identify eligible studies. Pooled estimates of the diagnostic odds ratio (DOR) and summary area under the curve (AUROC) were calculated. Meta-analyses were performed separately for studies using publicly available, ad-hoc datasets, versus targeted clinical data acquisition. Studies were scored on risk of bias by the PROBAST tool. FINDINGS 2194 studies were identified of which 46 were included in the systematic review and 32 in the meta-analysis. Pooling of individual models demonstrated a summary AUROC of 0.856 (95% CI 0.755-0.909) for short-term (time-to-event up to 72 h) prediction and AUROC of 0.876 (95% CI 0.642-0.980) for long-term prediction (time-to-event up to years). While models developed on ad-hoc sets had higher pooled performance (AUROC 0.919, 95% CI 0.867-0.952), they had a high risk of bias related to the re-use and overlap of small ad-hoc datasets, choices of ML tool and a lack of external model validation. INTERPRETATION ML and DL models appear to accurately predict malignant VA and SCD. However, wide heterogeneity between studies, in part due to small ad-hoc datasets and choice of ML model, may reduce the ability to generalise and should be addressed in future studies. FUNDING This publication is part of the project DEEP RISK ICD (with project number 452019308) of the research programme Rubicon which is (partly) financed by the Dutch Research Council (NWO). This research is partly funded by the Amsterdam Cardiovascular Sciences (personal grant F.V.Y.T).
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Affiliation(s)
- Maarten Z H Kolk
- Amsterdam UMC Location University of Amsterdam, Heart Center, Department of Clinical and Experimental Cardiology, Meibergdreef 9, Amsterdam, the Netherlands; Amsterdam Cardiovascular Sciences, Heart failure & arrhythmias, Amsterdam, The Netherlands
| | - Brototo Deb
- Department of Medicine and Cardiovascular Institute, Stanford University, Stanford, CA, USA
| | | | - Neil K Bhatia
- Department of Cardiology, Emory University, Atlanta, GA, USA
| | - Paul Clopton
- Department of Medicine and Cardiovascular Institute, Stanford University, Stanford, CA, USA
| | - Arthur A M Wilde
- Amsterdam UMC Location University of Amsterdam, Heart Center, Department of Clinical and Experimental Cardiology, Meibergdreef 9, Amsterdam, the Netherlands; Amsterdam Cardiovascular Sciences, Heart failure & arrhythmias, Amsterdam, The Netherlands
| | - Sanjiv M Narayan
- Department of Medicine and Cardiovascular Institute, Stanford University, Stanford, CA, USA
| | - Reinoud E Knops
- Amsterdam UMC Location University of Amsterdam, Heart Center, Department of Clinical and Experimental Cardiology, Meibergdreef 9, Amsterdam, the Netherlands; Amsterdam Cardiovascular Sciences, Heart failure & arrhythmias, Amsterdam, The Netherlands
| | - Fleur V Y Tjong
- Amsterdam UMC Location University of Amsterdam, Heart Center, Department of Clinical and Experimental Cardiology, Meibergdreef 9, Amsterdam, the Netherlands; Amsterdam Cardiovascular Sciences, Heart failure & arrhythmias, Amsterdam, The Netherlands.
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ECG-Based Identification of Sudden Cardiac Death through Sparse Representations. SENSORS 2021; 21:s21227666. [PMID: 34833740 PMCID: PMC8622957 DOI: 10.3390/s21227666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/02/2021] [Revised: 11/15/2021] [Accepted: 11/17/2021] [Indexed: 02/01/2023]
Abstract
Sudden Cardiac Death (SCD) is an unexpected sudden death due to a loss of heart function and represents more than 50% of the deaths from cardiovascular diseases. Since cardiovascular problems change the features in the electrical signal of the heart, if significant changes are found with respect to a reference signal (healthy), then it is possible to indicate in advance a possible SCD occurrence. This work proposes SCD identification using Electrocardiogram (ECG) signals and a sparse representation technique. Moreover, the use of fixed feature ranking is avoided by considering a dictionary as a flexible set of features where each sparse representation could be seen as a dynamic feature extraction process. In this way, the involved features may differ within the dictionary's margin of similarity, which is better-suited to the large number of variations that an ECG signal contains. The experiments were carried out using the ECG signals from the MIT/BIH-SCDH and the MIT/BIH-NSR databases. The results show that it is possible to achieve a detection 30 min before the SCD event occurs, reaching an an accuracy of 95.3% under the common scheme, and 80.5% under the proposed multi-class scheme, thus being suitable for detecting a SCD episode in advance.
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An Explainable Machine Learning Approach Based on Statistical Indexes and SVM for Stress Detection in Automobile Drivers Using Electromyographic Signals. SENSORS 2021; 21:s21093155. [PMID: 34062944 PMCID: PMC8125327 DOI: 10.3390/s21093155] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Revised: 04/28/2021] [Accepted: 04/28/2021] [Indexed: 11/29/2022]
Abstract
The economic and personal consequences that a car accident generates for society have been increasing in recent years. One of the causes that can generate a car accident is the stress level the driver has; consequently, the detection of stress events is a highly desirable task. In this article, the efficacy that statistical time features (STFs), such as root mean square, mean, variance, and standard deviation, among others, can reach in detecting stress events using electromyographical signals in drivers is investigated, since they can measure subtle changes that a signal can have. The obtained results show that the variance and standard deviation coupled with a support vector machine classifier with a cubic kernel are effective for detecting stress events where an AUC of 0.97 is reached. In this sense, since SVM has different kernels that can be trained, they are used to find out which one has the best efficacy using the STFs as feature inputs and a training strategy; thus, information about model explain ability can be determined. The explainability of the machine learning algorithm allows generating a deeper comprehension about the model efficacy and what model should be selected depending on the features used to its development.
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Ali Shah SA, Aziz W, Almaraashi M, Ahmed Nadeem MS, Habib N, Shim SO. A hybrid model for forecasting of particulate matter concentrations based on multiscale characterization and machine learning techniques. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2021; 18:1992-2009. [PMID: 33892534 DOI: 10.3934/mbe.2021104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Accurate prediction of particulate matter (PM) using time series data is a challenging task. The recent advancements in sensor technology, computing devices, nonlinear computational tools, and machine learning (ML) approaches provide new opportunities for robust prediction of PM concentrations. In this study, we develop a hybrid model for forecasting PM10 and PM2.5 based on the multiscale characterization and ML techniques. At first, we use the empirical mode decomposition (EMD) algorithm for multiscale characterization of PM10 and PM2.5 by decomposing the original time series into numerous intrinsic mode functions (IMFs). Different individual ML algorithms such as random forest (RF), support vector regressor (SVR), k-nearest neighbors (kNN), feed forward neural network (FFNN), and AdaBoost are then used to develop EMD-ML models. The air quality time series data from Masfalah air station Makkah, Saudi Arabia are utilized for validating the EMD-ML models, and results are compared with non-hybrid ML models. The PMs (PM10 and PM2.5) concentrations data of Dehli, India are also utilized for validating the EMD-ML models. The performance of each model is evaluated using root mean square error (RMSE) and mean absolute error (MAE). The average bias in the predictive model is estimated using mean bias error (MBE). Obtained results reveal that EMD-FFNN model provides the lowest error rate for both PM10 (RMSE = 12.25 and MAE = 7.43) and PM2.5 (RMSE = 4.81 and MAE = 3.02) using Misfalah, Makkah data whereas EMD-kNN model provides the lowest error rate for PM10 (RMSE = 20.56 and MAE = 12.87) and EMD-AdaBoost provides the lowest error rate for PM2.5 (RMSE = 15.29 and MAE = 9.45) using Dehli, India data. The findings also reveal that EMD-ML models can be effectively used in forecasting PM mass concentrations and to develop rapid air quality warning systems.
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Affiliation(s)
- Syed Ahsin Ali Shah
- Department of Computer Science & IT, University of Azad Jammu and Kashmir, King Abdullah Campus, Muzaffarabad 13100, AJK, Pakistan
| | - Wajid Aziz
- Department of Computer Science & IT, University of Azad Jammu and Kashmir, King Abdullah Campus, Muzaffarabad 13100, AJK, Pakistan
- College of Computer Science & Engineering, University of Jeddah, Jeddah 23890, Saudi Arabia
| | - Majid Almaraashi
- College of Computer Science & Engineering, University of Jeddah, Jeddah 23890, Saudi Arabia
| | - Malik Sajjad Ahmed Nadeem
- Department of Computer Science & IT, University of Azad Jammu and Kashmir, King Abdullah Campus, Muzaffarabad 13100, AJK, Pakistan
| | - Nazneen Habib
- Department of Sociology & Rural Development, University of Azad Jammu Kashmir, Muzaffarabad 13100, AJK, Pakistan
| | - Seong-O Shim
- College of Computer Science & Engineering, University of Jeddah, Jeddah 23890, Saudi Arabia
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Wavelet Transform-Statistical Time Features-Based Methodology for Epileptic Seizure Prediction Using Electrocardiogram Signals. MATHEMATICS 2020. [DOI: 10.3390/math8122125] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Epilepsy is a brain disorder that affects about 50 million persons around the world and is characterized by generating recurrent seizures, which can put patients in permanent because of falls, drowning, burns, and prolonged seizures that they can suffer. Hence, it is of vital importance to propose a methodology with the capability of predicting a seizure with several minutes before the onset, allowing that the patients take their precautions against injuries. In this regard, a methodology based on the wavelet packet transform (WPT), statistical time features (STFs), and a decision tree classifier (DTC) for predicting an epileptic seizure using electrocardiogram (ECG) signals is presented. Seventeen STFs were analyzed to measure changes in the properties of ECG signals and find characteristics capable of differentiating between healthy and 15 min prior to seizure signals. The effectiveness of the proposed methodology for predicting an epileptic event is demonstrated using a database of seven patients with 10 epileptic seizures, which was provided by the Massachusetts Institute of Technology–Beth Israel Hospital (MIT–BIH). The results show that the proposed methodology is capable of predicting an epileptic seizure 15 min before with an accuracy of 100%. Our results suggest that the use of STFs at frequency bands related to heart activity to find parameters for the prediction of epileptic seizures is suitable.
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Ugya AY, Hasan DB, Ari HA, Ajibade FO, Imam TS, Abba A, Hua X. Natural freshwater microalgae biofilm as a tool for the clean-up of water resulting from mining activities. ALL LIFE 2020. [DOI: 10.1080/26895293.2020.1844307] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Affiliation(s)
- Adamu Yunusa Ugya
- Key Lab of Groundwater Resources and Environment of Ministry of Education, Key Lab of Water Resources and Aquatic Environment of Jilin Province, College of New Energy and Environment, Jilin University, Changchun, People’s Republic of China
- Department of Environmental Management, Kaduna State University, Kaduna, Nigeria
| | | | - Hadiza Abdullahi Ari
- Key Lab of Groundwater Resources and Environment of Ministry of Education, Key Lab of Water Resources and Aquatic Environment of Jilin Province, College of New Energy and Environment, Jilin University, Changchun, People’s Republic of China
- Faculty of Sciences, National Open University of Nigeria, Lagos, Nigeria
| | - Fidelis Odedishemi Ajibade
- Department of Civil and Environmental Engineering, Federal University of Technology Akure, Akure, Nigeria
- Key Lab of Environmental Biotechnology, Research Centre for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, People’s Republic of China
| | | | - Abidina Abba
- Department of Biological Sciences, Federal University Lokoja, Anyigba, Nigeria
| | - Xiuyi Hua
- Key Lab of Groundwater Resources and Environment of Ministry of Education, Key Lab of Water Resources and Aquatic Environment of Jilin Province, College of New Energy and Environment, Jilin University, Changchun, People’s Republic of China
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Phonocardiogram Signal Processing for Automatic Diagnosis of Congenital Heart Disorders through Fusion of Temporal and Cepstral Features. SENSORS 2020; 20:s20133790. [PMID: 32640710 PMCID: PMC7374414 DOI: 10.3390/s20133790] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Revised: 06/30/2020] [Accepted: 07/01/2020] [Indexed: 12/19/2022]
Abstract
Congenital heart disease (CHD) is a heart disorder associated with the devastating indications that result in increased mortality, increased morbidity, increased healthcare expenditure, and decreased quality of life. Ventricular Septal Defects (VSDs) and Arterial Septal Defects (ASDs) are the most common types of CHD. CHDs can be controlled before reaching a serious phase with an early diagnosis. The phonocardiogram (PCG) or heart sound auscultation is a simple and non-invasive technique that may reveal obvious variations of different CHDs. Diagnosis based on heart sounds is difficult and requires a high level of medical training and skills due to human hearing limitations and the non-stationary nature of PCGs. An automated computer-aided system may boost the diagnostic objectivity and consistency of PCG signals in the detection of CHDs. The objective of this research was to assess the effects of various pattern recognition modalities for the design of an automated system that effectively differentiates normal, ASD, and VSD categories using short term PCG time series. The proposed model in this study adopts three-stage processing: pre-processing, feature extraction, and classification. Empirical mode decomposition (EMD) was used to denoise the raw PCG signals acquired from subjects. One-dimensional local ternary patterns (1D-LTPs) and Mel-frequency cepstral coefficients (MFCCs) were extracted from the denoised PCG signal for precise representation of data from different classes. In the final stage, the fused feature vector of 1D-LTPs and MFCCs was fed to the support vector machine (SVM) classifier using 10-fold cross-validation. The PCG signals were acquired from the subjects admitted to local hospitals and classified by applying various experiments. The proposed methodology achieves a mean accuracy of 95.24% in classifying ASD, VSD, and normal subjects. The proposed model can be put into practice and serve as a second opinion for cardiologists by providing more objective and faster interpretations of PCG signals.
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Abstract
The contributions of researchers at a global level in the journal Electronics in the period 2012–2020 are analyzed. The objective of this work is to establish a global vision of the issues published in the Electronic magazine and their importance, advances and developments that have been particularly relevant for subsequent research. The magazine has 15 thematic sections and a general one, with the programming of 385 special issues for 2020–2021. Using the Scopus database and bibliometric techniques, 2310 documents are obtained and distributed in 14 thematic communities. The communities that contribute to the greatest number of works are Power Electronics (20.13%), Embedded Computer Systems (13.59%) and Internet of Things and Machine Learning Systems (8.11%). A study of the publications by authors, affiliations, countries as well as the H index was undertaken. The 7561 authors analyzed are distributed in 87 countries, with China being the country of the majority (2407 authors), followed by South Korea (763 authors). The H-index of most authors (75.89%) ranges from 0 to 9, where the authors with the highest H-Index are from the United States, Denmark, Italy and India. The main publication format is the article (92.16%) and the review (5.84%). The magazine publishes topics in continuous development that will be further investigated and published in the near future in fields as varied as the transport sector, energy systems, the development of new broadband semiconductors, new modulation and control techniques, and more.
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