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Shin M, Seo M, Lee K, Yoon K. Super-resolution techniques for biomedical applications and challenges. Biomed Eng Lett 2024; 14:465-496. [PMID: 38645589 PMCID: PMC11026337 DOI: 10.1007/s13534-024-00365-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Revised: 02/12/2024] [Accepted: 02/18/2024] [Indexed: 04/23/2024] Open
Abstract
Super-resolution (SR) techniques have revolutionized the field of biomedical applications by detailing the structures at resolutions beyond the limits of imaging or measuring tools. These techniques have been applied in various biomedical applications, including microscopy, magnetic resonance imaging (MRI), computed tomography (CT), X-ray, electroencephalogram (EEG), ultrasound, etc. SR methods are categorized into two main types: traditional non-learning-based methods and modern learning-based approaches. In both applications, SR methodologies have been effectively utilized on biomedical images, enhancing the visualization of complex biological structures. Additionally, these methods have been employed on biomedical data, leading to improvements in computational precision and efficiency for biomedical simulations. The use of SR techniques has resulted in more detailed and accurate analyses in diagnostics and research, essential for early disease detection and treatment planning. However, challenges such as computational demands, data interpretation complexities, and the lack of unified high-quality data persist. The article emphasizes these issues, underscoring the need for ongoing development in SR technologies to further improve biomedical research and patient care outcomes.
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Affiliation(s)
- Minwoo Shin
- School of Mathematics and Computing (Computational Science and Engineering), Yonsei University, 50 Yonsei-Ro, Seodaemun-Gu, Seoul, 03722 Republic of Korea
| | - Minjee Seo
- School of Mathematics and Computing (Computational Science and Engineering), Yonsei University, 50 Yonsei-Ro, Seodaemun-Gu, Seoul, 03722 Republic of Korea
| | - Kyunghyun Lee
- School of Mathematics and Computing (Computational Science and Engineering), Yonsei University, 50 Yonsei-Ro, Seodaemun-Gu, Seoul, 03722 Republic of Korea
| | - Kyungho Yoon
- School of Mathematics and Computing (Computational Science and Engineering), Yonsei University, 50 Yonsei-Ro, Seodaemun-Gu, Seoul, 03722 Republic of Korea
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2
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Weng C, Gu X, Jin H. Coded Excitation for Ultrasonic Testing: A Review. SENSORS (BASEL, SWITZERLAND) 2024; 24:2167. [PMID: 38610378 PMCID: PMC11014118 DOI: 10.3390/s24072167] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Revised: 03/12/2024] [Accepted: 03/21/2024] [Indexed: 04/14/2024]
Abstract
Originating in the early 20th century, ultrasonic testing has found increasingly extensive applications in medicine, industry, and materials science. Achieving both a high signal-to-noise ratio and high efficiency is crucial in ultrasonic testing. The former means an increase in imaging clarity as well as the detection depth, while the latter facilitates a faster refresh of the image. It is difficult to balance these two indicators with a conventional short pulse to excite the probe, so in general handling methods, these two factors have a trade-off. To solve the above problems, coded excitation (CE) can increase the pulse duration and offers great potential to improve the signal-to-noise ratio with equivalent or even higher efficiency. In this paper, we first review the fundamentals of CE, including signal modulation, signal transmission, signal reception, pulse compression, and optimization methods. Then, we introduce the application of CE in different areas of ultrasonic testing, with a focus on industrial bulk wave single-probe detection, industrial guided wave detection, industrial bulk wave phased array detection, and medical phased array imaging. Finally, we point out the advantages as well as a few future directions of CE.
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Affiliation(s)
| | | | - Haoran Jin
- The State Key Laboratory of Fluid Power and Mechatronic Systems, College of Mechanical Engineering, Zhejiang University, Hangzhou 310027, China; (C.W.); (X.G.)
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3
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Kim WS, Min S, Kim SK, Kang S, An S, Criado-Hidalgo E, Davis H, Bar-Zion A, Malounda D, Kim YH, Lee JH, Bae SH, Lee JG, Kwak M, Cho SW, Shapiro MG, Cheon J. Magneto-acoustic protein nanostructures for non-invasive imaging of tissue mechanics in vivo. NATURE MATERIALS 2024; 23:290-300. [PMID: 37845321 PMCID: PMC10837075 DOI: 10.1038/s41563-023-01688-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Accepted: 09/12/2023] [Indexed: 10/18/2023]
Abstract
Measuring cellular and tissue mechanics inside intact living organisms is essential for interrogating the roles of force in physiological and disease processes. Current agents for studying the mechanobiology of intact, living organisms are limited by poor light penetration and material stability. Magnetomotive ultrasound is an emerging modality for real-time in vivo imaging of tissue mechanics. Nonetheless, it has poor sensitivity and spatiotemporal resolution. Here we describe magneto-gas vesicles (MGVs), protein nanostructures based on gas vesicles and magnetic nanoparticles that produce differential ultrasound signals in response to varying mechanical properties of surrounding tissues. These hybrid nanomaterials significantly improve signal strength and detection sensitivity. Furthermore, MGVs enable non-invasive, long-term and quantitative measurements of mechanical properties within three-dimensional tissues and in vivo fibrosis models. Using MGVs as novel contrast agents, we demonstrate their potential for non-invasive imaging of tissue elasticity, offering insights into mechanobiology and its application to disease diagnosis and treatment.
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Affiliation(s)
- Whee-Soo Kim
- Center for Nanomedicine, Institute for Basic Science (IBS), Seoul, Republic of Korea
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA
- Department of Nano Biomedical Engineering (NanoBME), Advanced Science Institute, Yonsei University, Seoul, Republic of Korea
| | - Sungjin Min
- Department of Biotechnology, Yonsei University, Seoul, Republic of Korea
| | - Su Kyeom Kim
- Department of Biotechnology, Yonsei University, Seoul, Republic of Korea
| | - Sunghwi Kang
- Center for Nanomedicine, Institute for Basic Science (IBS), Seoul, Republic of Korea
- Department of Nano Biomedical Engineering (NanoBME), Advanced Science Institute, Yonsei University, Seoul, Republic of Korea
- Department of Chemistry, Yonsei University, Seoul, Republic of Korea
| | - Soohwan An
- Department of Biotechnology, Yonsei University, Seoul, Republic of Korea
| | - Ernesto Criado-Hidalgo
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA
| | - Hunter Davis
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA
| | - Avinoam Bar-Zion
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA
| | - Dina Malounda
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA
| | - Yu Heun Kim
- Department of Biotechnology, Yonsei University, Seoul, Republic of Korea
| | - Jae-Hyun Lee
- Center for Nanomedicine, Institute for Basic Science (IBS), Seoul, Republic of Korea
- Department of Nano Biomedical Engineering (NanoBME), Advanced Science Institute, Yonsei University, Seoul, Republic of Korea
| | - Soo Han Bae
- Severance Biomedical Science Institute, Yonsei Biomedical Research Institute, Yonsei University College of Medicine, Seoul, Republic of Korea
- Severance Biomedical Science Institute, Graduate School of Medical Science, Brain Korea 21 Project, Yonsei University College of Medicine, Seoul, Republic of Korea
| | - Jin Gu Lee
- Department of Thoracic and Cardiovascular Surgery, Severance Hospital, Yonsei University College of Medicine, Seoul, Republic of Korea
| | - Minsuk Kwak
- Center for Nanomedicine, Institute for Basic Science (IBS), Seoul, Republic of Korea
- Department of Nano Biomedical Engineering (NanoBME), Advanced Science Institute, Yonsei University, Seoul, Republic of Korea
| | - Seung-Woo Cho
- Center for Nanomedicine, Institute for Basic Science (IBS), Seoul, Republic of Korea.
- Department of Nano Biomedical Engineering (NanoBME), Advanced Science Institute, Yonsei University, Seoul, Republic of Korea.
- Department of Biotechnology, Yonsei University, Seoul, Republic of Korea.
| | - Mikhail G Shapiro
- Center for Nanomedicine, Institute for Basic Science (IBS), Seoul, Republic of Korea.
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA.
- Department of Nano Biomedical Engineering (NanoBME), Advanced Science Institute, Yonsei University, Seoul, Republic of Korea.
- Andrew and Peggy Cherng Department of Medical Engineering, California Institute of Technology, Pasadena, CA, USA.
- Howard Hughes Medical Institute, Pasadena, CA, USA.
| | - Jinwoo Cheon
- Center for Nanomedicine, Institute for Basic Science (IBS), Seoul, Republic of Korea.
- Department of Nano Biomedical Engineering (NanoBME), Advanced Science Institute, Yonsei University, Seoul, Republic of Korea.
- Department of Chemistry, Yonsei University, Seoul, Republic of Korea.
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4
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Yoon H, Kim J, Lee K, Song TK. Design and Implementation of Analog-Digital Hybrid Beamformers for Low-Complexity Ultrasound Systems: A Feasibility Study. Bioengineering (Basel) 2023; 11:8. [PMID: 38275576 PMCID: PMC10813642 DOI: 10.3390/bioengineering11010008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Revised: 12/17/2023] [Accepted: 12/19/2023] [Indexed: 01/27/2024] Open
Abstract
Low-complexity ultrasound systems are increasingly desired for both wearable, point-of-care ultrasound and high-end massive-channel ultrasound for 3-D matrix imaging. However, the imaging capabilities, including spatial resolution and contrast, could suffer as low complexity systems are pursued, which remains as an unresolved tradeoff. To mitigate this limitation, this study revisits the general structures of analog and digital beamformers and introduces a hybrid approach, referred to as analog-digital hybrid beamforming, to implement efficient ultrasound systems. The suggested hybrid beamforming takes two stages sequentially, where the first analog stage partially beamforms M-channel RF signals to N sum-out data (i.e., M-to-N beamforming), and the second digital stage beamforms N partial sums to single final beamformed data (i.e., N-to-1 beamforming). Our approach was systematically designed and implemented with only four major integrated circuits, which was capable of driving full 64-channel transmission and reception. The developed system was demonstrated with a customized 64-channel 1-D phased array using a commercial tissue mimicking phantom. From the phantom imaging results, signal-to-noise ratio, contrast-to-noise ratio, and full beam width at half maximum values were quantitatively evaluated. The demonstrated results indicate that the analog-digital hybrid beamforming can be applied to any type of array for sophisticated 3-D imaging and tiny wearable ultrasound applications.
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Affiliation(s)
- Heechul Yoon
- School of Electronics and Electrical Engineering, Dankook University, Yongin-si 16890, Republic of Korea;
| | - Junseung Kim
- Department of Electronic Engineering, Sogang University, Seoul 04107, Republic of Korea
| | - Kunkyu Lee
- Department of Electronic Engineering, Sogang University, Seoul 04107, Republic of Korea
| | - Tai-Kyong Song
- Department of Electronic Engineering, Sogang University, Seoul 04107, Republic of Korea
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5
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Zhang G, Liao C, Hu JR, Hu HM, Lei YM, Harput S, Ye HR. Nanodroplet-Based Super-Resolution Ultrasound Localization Microscopy. ACS Sens 2023; 8:3294-3306. [PMID: 37607403 DOI: 10.1021/acssensors.3c00418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/24/2023]
Abstract
Over the past decade, super-resolution ultrasound localization microscopy (SR-ULM) has revolutionized ultrasound imaging with its capability to resolve the microvascular structures below the ultrasound diffraction limit. The introduction of this imaging technique enables the visualization, quantification, and characterization of tissue microvasculature. The early implementations of SR-ULM utilize microbubbles (MBs) that require a long image acquisition time due to the requirement of capturing sparsely isolated microbubble signals. The next-generation SR-ULM employs nanodroplets that have the potential to significantly reduce the image acquisition time without sacrificing the resolution. This review discusses various nanodroplet-based ultrasound localization microscopy techniques and their corresponding imaging mechanisms. A summary is given on the preclinical applications of SR-ULM with nanodroplets, and the challenges in the clinical translation of nanodroplet-based SR-ULM are presented while discussing the future perspectives. In conclusion, ultrasound localization microscopy is a promising microvasculature imaging technology that can provide new diagnostic and prognostic information for a wide range of pathologies, such as cancer, heart conditions, and autoimmune diseases, and enable personalized treatment monitoring at a microlevel.
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Affiliation(s)
- Ge Zhang
- Department of Medical Ultrasound, China Resources & Wisco General Hospital, Wuhan University of Science and Technology, Wuhan 430080, People's Republic of China
- Hubei Province Key Laboratory of Occupational Hazard Identification and Control, Wuhan University of Science and Technology, Wuhan 430065, People's Republic of China
- Physics for Medicine Paris, Inserm U1273, ESPCI Paris, PSL University, CNRS, Paris 75015, France
| | - Chen Liao
- Department of Medical Ultrasound, China Resources & Wisco General Hospital, Wuhan University of Science and Technology, Wuhan 430080, People's Republic of China
- Medical College, Wuhan University of Science and Technology, Wuhan 430065, People's Republic of China
| | - Jun-Rui Hu
- Department of Pharmacy, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430022, People's Republic of China
| | - Hai-Man Hu
- Department of Electrical and Electronic Engineering, Hubei University of Technology, Wuhan 430068, People's Republic of China
| | - Yu-Meng Lei
- Department of Medical Ultrasound, China Resources & Wisco General Hospital, Wuhan University of Science and Technology, Wuhan 430080, People's Republic of China
| | - Sevan Harput
- Department of Electrical and Electronic Engineering, London South Bank University, London SE1 0AA, U.K
| | - Hua-Rong Ye
- Department of Medical Ultrasound, China Resources & Wisco General Hospital, Wuhan University of Science and Technology, Wuhan 430080, People's Republic of China
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6
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Fasoula NA, Xie Y, Katsouli N, Reidl M, Kallmayer MA, Eckstein HH, Ntziachristos V, Hadjileontiadis L, Avgerinos DV, Briasoulis A, Siasos G, Hosseini K, Doulamis I, Kampaktsis PN, Karlas A. Clinical and Translational Imaging and Sensing of Diabetic Microangiopathy: A Narrative Review. J Cardiovasc Dev Dis 2023; 10:383. [PMID: 37754812 PMCID: PMC10531807 DOI: 10.3390/jcdd10090383] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 08/21/2023] [Accepted: 08/25/2023] [Indexed: 09/28/2023] Open
Abstract
Microvascular changes in diabetes affect the function of several critical organs, such as the kidneys, heart, brain, eye, and skin, among others. The possibility of detecting such changes early enough in order to take appropriate actions renders the development of appropriate tools and techniques an imperative need. To this end, several sensing and imaging techniques have been developed or employed in the assessment of microangiopathy in patients with diabetes. Herein, we present such techniques; we provide insights into their principles of operation while discussing the characteristics that make them appropriate for such use. Finally, apart from already established techniques, we present novel ones with great translational potential, such as optoacoustic technologies, which are expected to enter clinical practice in the foreseeable future.
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Affiliation(s)
- Nikolina-Alexia Fasoula
- Institute of Biological and Medical Imaging, Helmholtz Zentrum München, 85764 Neuherberg, Germany; (N.-A.F.); (Y.X.); (N.K.); (V.N.)
- Chair of Biological Imaging at the Central Institute for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, 81675 Munich, Germany
| | - Yi Xie
- Institute of Biological and Medical Imaging, Helmholtz Zentrum München, 85764 Neuherberg, Germany; (N.-A.F.); (Y.X.); (N.K.); (V.N.)
- Chair of Biological Imaging at the Central Institute for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, 81675 Munich, Germany
| | - Nikoletta Katsouli
- Institute of Biological and Medical Imaging, Helmholtz Zentrum München, 85764 Neuherberg, Germany; (N.-A.F.); (Y.X.); (N.K.); (V.N.)
- Chair of Biological Imaging at the Central Institute for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, 81675 Munich, Germany
| | - Mario Reidl
- Institute of Biological and Medical Imaging, Helmholtz Zentrum München, 85764 Neuherberg, Germany; (N.-A.F.); (Y.X.); (N.K.); (V.N.)
- Chair of Biological Imaging at the Central Institute for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, 81675 Munich, Germany
| | - Michael A. Kallmayer
- Department for Vascular and Endovascular Surgery, Klinikum rechts der Isar, Technical University of Munich (TUM), 81675 Munich, Germany; (M.A.K.); (H.-H.E.)
| | - Hans-Henning Eckstein
- Department for Vascular and Endovascular Surgery, Klinikum rechts der Isar, Technical University of Munich (TUM), 81675 Munich, Germany; (M.A.K.); (H.-H.E.)
| | - Vasilis Ntziachristos
- Institute of Biological and Medical Imaging, Helmholtz Zentrum München, 85764 Neuherberg, Germany; (N.-A.F.); (Y.X.); (N.K.); (V.N.)
- Chair of Biological Imaging at the Central Institute for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, 81675 Munich, Germany
- DZHK (German Centre for Cardiovascular Research), Partner Site Munich Heart Alliance, 80336 Munich, Germany
| | - Leontios Hadjileontiadis
- Department of Biomedical Engineering, Healthcare Engineering Innovation Center (HEIC), Khalifa University, Abu Dhabi P.O. Box 127788, United Arab Emirates;
- Department of Electrical and Computer Engineering, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece
| | | | - Alexandros Briasoulis
- Aleksandra Hospital, National and Kapodistrian University of Athens Medical School, 11527 Athens, Greece;
| | - Gerasimos Siasos
- Sotiria Hospital, National and Kapodistrian University of Athens Medical School, 11527 Athens, Greece;
| | - Kaveh Hosseini
- Cardiac Primary Prevention Research Center, Cardiovascular Disease Research Institute, Tehran University of Medical Sciences, Tehran 1411713138, Iran;
| | - Ilias Doulamis
- Department of Surgery, The Johns Hopkins Hospital, School of Medicine, Baltimore, MD 21287, USA;
| | | | - Angelos Karlas
- Institute of Biological and Medical Imaging, Helmholtz Zentrum München, 85764 Neuherberg, Germany; (N.-A.F.); (Y.X.); (N.K.); (V.N.)
- Chair of Biological Imaging at the Central Institute for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, 81675 Munich, Germany
- Department for Vascular and Endovascular Surgery, Klinikum rechts der Isar, Technical University of Munich (TUM), 81675 Munich, Germany; (M.A.K.); (H.-H.E.)
- DZHK (German Centre for Cardiovascular Research), Partner Site Munich Heart Alliance, 80336 Munich, Germany
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7
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Sohn J, Se Cha M. Evidence and Practicality of Real-Time Ultrasound-Guided Procedures in the Intensive Care Unit: A New Skill Set for the Intensivist. Tex Heart Inst J 2023; 50:e238166. [PMID: 37432768 PMCID: PMC10660895 DOI: 10.14503/thij-23-8166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/13/2023]
Affiliation(s)
- Jacqueline Sohn
- Department of Anesthesiology, Division of Cardiovascular Anesthesia and Critical Care Medicine, Baylor College of Medicine, Houston, Texas
| | - Min Se Cha
- Department of Cardiovascular Anesthesiology, The Texas Heart Institute, Houston, Texas
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8
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Ruiter NV, Zapf M, Hopp T, Gemmeke H. Ultrasound Tomography. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2023; 1403:171-200. [PMID: 37495919 DOI: 10.1007/978-3-031-21987-0_9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/28/2023]
Abstract
Ultrasound tomography (USCT) is a promising imaging modality, mainly aiming at early diagnosis of breast cancer. It provides three-dimensional, reproducible images of higher quality than conventional ultrasound methods and additionally offers quantitative information on tissue properties. This chapter provides an introduction to the background and history of USCT, followed by an overview of image reconstruction algorithms and system design. It concludes with a discussion of current and future applications as well as limitations and their potential solutions.
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Affiliation(s)
- Nicole V Ruiter
- Institute for Data Processing and Electronics, Karlsruhe Institute of Technology, Karlsruhe, Germany.
| | - Michael Zapf
- Institute for Data Processing and Electronics, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Torsten Hopp
- Institute for Data Processing and Electronics, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - Hartmut Gemmeke
- Institute for Data Processing and Electronics, Karlsruhe Institute of Technology, Karlsruhe, Germany
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9
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Lok UW, Huang C, Trzasko JD, Kim Y, Lucien F, Tang S, Gong P, Song P, Chen S. Three-Dimensional Ultrasound Localization Microscopy with Bipartite Graph-Based Microbubble Pairing and Kalman-Filtering-Based Tracking on a 256-Channel Verasonics Ultrasound System with a 32 × 32 Matrix Array. J Med Biol Eng 2022; 42:767-779. [PMID: 36712192 PMCID: PMC9881453 DOI: 10.1007/s40846-022-00755-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 10/05/2022] [Indexed: 02/02/2023]
Abstract
Three-dimensional (3D) ultrasound localization microscopy (ULM) using a 2-D matrix probe and microbubbles (MBs) has been recently proposed to visualize microvasculature beyond the ultrasound diffraction limit in three spatial dimensions. However, 3D ULM suffers from several limitations: (1) high system complexity due to numerous channel counts, (2) complex MB flow dynamics in 3D, and (3) extremely long acquisition time. To reduce the system complexity while maintaining high image quality, we used a sub-aperture process to reduce received channel counts. To address the second issue, a 3D bipartite graph-based method with Kalman filtering-based tracking was used in this study for MB tracking. An MB separation approach was incorporated to separate high concentration MB data into multiple, sparser MB datasets, allowing better MB localization and tracking for a limited acquisition time. The proposed method was first validated in a flow channel phantom, showing improved spatial resolutions compared with the contrasted enhanced power Doppler image. Then the proposed method was evaluated with an in vivo chicken embryo brain dataset. Results showed that the reconstructed 3D super-resolution image achieved a spatial resolution of around 52 μm (smaller than the wavelength of around 200 μm). Microvessels that cannot be resolved clearly using localization only, can be well identified with the tailored 3D pairing and tracking algorithms. To sum up, the feasibility of the 3D ULM is shown, indicating the great possibility in clinical applications.
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Affiliation(s)
- U-Wai Lok
- Department of Radiology, Mayo Clinic College of Medicine and Science, Rochester, MN
| | - Chengwu Huang
- Department of Radiology, Mayo Clinic College of Medicine and Science, Rochester, MN
| | - Joshua D. Trzasko
- Department of Radiology, Mayo Clinic College of Medicine and Science, Rochester, MN
| | - Yohan Kim
- Department of Urology, Mayo Clinic College of Medicine and Science, Rochester, MN
| | - Fabrice Lucien
- Department of Urology, Mayo Clinic College of Medicine and Science, Rochester, MN
| | - Shanshan Tang
- Department of Radiology, Mayo Clinic College of Medicine and Science, Rochester, MN
| | - Ping Gong
- Department of Radiology, Mayo Clinic College of Medicine and Science, Rochester, MN
| | - Pengfei Song
- Department of Radiology, Mayo Clinic College of Medicine and Science, Rochester, MN
- Beckman Institute, University of Illinois at Urbana-Champaign, Urbana, IL
- Department of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Urbana, IL
| | - Shigao Chen
- Corresponding Author: Dr. Shigao Chen, Department of Radiology, Mayo Clinic, 200 First Street SW, Rochester, MN 55905,
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10
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Martinez P, Bottenus N, Borden M. Cavitation Characterization of Size-Isolated Microbubbles in a Vessel Phantom Using Focused Ultrasound. Pharmaceutics 2022; 14:pharmaceutics14091925. [PMID: 36145673 PMCID: PMC9501432 DOI: 10.3390/pharmaceutics14091925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Revised: 08/30/2022] [Accepted: 09/06/2022] [Indexed: 12/03/2022] Open
Abstract
Pharmaceutical delivery can be noninvasively targeted on-demand by microbubble (MB) assisted focused ultrasound (FUS). Passive cavitation detection (PCD) has become a useful method to obtain real-time feedback on MB activity due to a FUS pulse. Previous work has demonstrated the acoustic PCD response of MBs at a variety of acoustic parameters, but few have explored variations in microbubble parameters. The goal of this study was to determine the acoustic response of different MB size populations and concentrations. Four MB size distributions were prepared (2, 3, 5 µm diameter and polydisperse) and pulled through a 2% agar wall-less vessel phantom. FUS was applied by a 1.515 MHz geometrically focused transducer for 1 ms pulses at 1 Hz PRF and seven distinct mechanical indices (MI) ranging from 0.01 to 1.0 (0.0123 to 1.23 MPa PNP). We found that the onset of harmonic (HCD) and broadband cavitation dose (BCD) depends on the mechanical index, MB size and MB concentration. When matched for MI, the HCD and BCD rise, plateau, and decline as microbubble concentration is increased. Importantly, when microbubble size and concentration are combined into gas volume fraction, all four microbubble size distributions align to similar onset and peak; these results may help guide the planning and control of MB + FUS therapeutic procedures.
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Affiliation(s)
- Payton Martinez
- Biomedical Engineering Program, University of Colorado, Boulder, CO 80309, USA; (P.M.); (N.B.)
- IQ Biology Program, University of Colorado, Boulder, CO 80309, USA
| | - Nick Bottenus
- Biomedical Engineering Program, University of Colorado, Boulder, CO 80309, USA; (P.M.); (N.B.)
- Mechanical Engineering Department, University of Colorado, Boulder, CO 80309, USA
| | - Mark Borden
- Biomedical Engineering Program, University of Colorado, Boulder, CO 80309, USA; (P.M.); (N.B.)
- Mechanical Engineering Department, University of Colorado, Boulder, CO 80309, USA
- Correspondence:
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11
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Kumar V, Cecconi V, Peters L, Bertolotti J, Pasquazi A, Totero Gongora JS, Peccianti M. Deterministic Terahertz Wave Control in Scattering Media. ACS PHOTONICS 2022; 9:2634-2642. [PMID: 35996370 PMCID: PMC9389618 DOI: 10.1021/acsphotonics.2c00061] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Scattering-assisted synthesis of broadband optical pulses is recognized to have a cross-disciplinary fundamental and application importance. Achieving full-waveform synthesis generally requires means for assessing the instantaneous electric field, i.e., the absolute electromagnetic phase. These are generally not accessible to established methodologies for scattering-assisted pulse envelope and phase shaping. The lack of field sensitivity also results in complex indirect approaches to evaluate the scattering space-time properties. The terahertz frequency domain potentially offers some distinctive new possibilities, thanks to the availability of methods to perform absolute measurements of the scattered electric field, as opposed to optical intensity-based diagnostics. An interesting conceptual question is whether this additional degree of freedom can lead to different types of methodologies toward wave shaping and direct field-waveform control. In this work, we theoretically investigate a deterministic scheme to achieve broadband, spatiotemporal waveform control of terahertz fields mediated by a scattering medium. Direct field access via time-domain spectroscopy enables a process in which the field and scattering matrix of the medium are assessed with minimal experimental efforts. Then, illumination conditions for an arbitrary targeted output field waveform are deterministically retrieved through numerical inversion. In addition, complete field knowledge enables reconstructing field distributions with complex phase profiles, as in the case of phase-only masks and optical vortices, a significantly challenging task for traditional implementations at optical frequencies based on intensity measurements aided with interferometric techniques.
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Affiliation(s)
- Vivek Kumar
- Emergent
Photonics Lab (EPic), Department of Physics and Astronomy, University of Sussex, Brighton BN1 9QH, U.K.
| | - Vittorio Cecconi
- Emergent
Photonics Lab (EPic), Department of Physics and Astronomy, University of Sussex, Brighton BN1 9QH, U.K.
| | - Luke Peters
- Emergent
Photonics Lab (EPic), Department of Physics and Astronomy, University of Sussex, Brighton BN1 9QH, U.K.
| | - Jacopo Bertolotti
- Department
of Physics and Astronomy, University of
Exeter, Exeter, Devon EX4 4QL, U.K.
| | - Alessia Pasquazi
- Emergent
Photonics Lab (EPic), Department of Physics and Astronomy, University of Sussex, Brighton BN1 9QH, U.K.
| | | | - Marco Peccianti
- Emergent
Photonics Lab (EPic), Department of Physics and Astronomy, University of Sussex, Brighton BN1 9QH, U.K.
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12
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Abstract
In this review, the roles of detectors in various medical imaging techniques were described. Ultrasound, optical (near-infrared spectroscopy and optical coherence tomography) and thermal imaging, magnetic resonance imaging, computed tomography, single-photon emission tomography, positron emission tomography were the imaging modalities considered. For each methodology, the state of the art of detectors mainly used in the systems was described, emphasizing new technologies applied.
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13
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Yoon C, Lee C. Recent Advances in Imaging Sensors and Applications. SENSORS 2021; 21:s21123970. [PMID: 34207534 PMCID: PMC8229651 DOI: 10.3390/s21123970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 05/29/2021] [Accepted: 06/07/2021] [Indexed: 11/25/2022]
Affiliation(s)
- Changhan Yoon
- Department of Biomedical Engineering, Inje University, Gimhae 50834, Korea;
- Department of Nanoscience and Engineering, Inje University, Gimhae 50834, Korea
| | - Changho Lee
- Department of Artificial Intelligence Convergence, Chonnam National University, 77 Yongbong-ro, Buk-gu, Gwangju 61186, Korea
- Department of Nuclear Medicine, Chonnam National University Medical School & Hwasun Hospital, Hwasun 58128, Korea
- Correspondence:
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14
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Attention Mechanisms in CNN-Based Single Image Super-Resolution: A Brief Review and a New Perspective. ELECTRONICS 2021. [DOI: 10.3390/electronics10101187] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
With the advance of deep learning, the performance of single image super-resolution (SR) has been notably improved by convolution neural network (CNN)-based methods. However, the increasing depth of CNNs makes them more difficult to train, which hinders the SR networks from achieving greater success. To overcome this, a wide range of related mechanisms has been introduced into the SR networks recently, with the aim of helping them converge more quickly and perform better. This has resulted in many research papers that incorporated a variety of attention mechanisms into the above SR baseline from different perspectives. Thus, this survey focuses on this topic and provides a review of these recently published works by grouping them into three major categories: channel attention, spatial attention, and non-local attention. For each of the groups in the taxonomy, the basic concepts are first explained, and then we delve deep into the detailed insights and contributions. Finally, we conclude this review by highlighting the bottlenecks of the current SR attention mechanisms, and propose a new perspective that can be viewed as a potential way to make a breakthrough.
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15
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Starkhammar J, Reinhold I, Erlöv T, Sandsten M. Scaled reassigned spectrograms applied to linear transducer signals. JASA EXPRESS LETTERS 2021; 1:052001. [PMID: 36154114 DOI: 10.1121/10.0005000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
This study evaluates the applicability of scaled reassigned spectrograms (ReSTS) on ultrasound radio frequency data obtained with a clinical linear array ultrasound transducer. The ReSTS's ability to resolve axially closely spaced objects in a phantom is compared to the classical cross-correlation method with respect to the ability to resolve closely spaced objects as individual reflectors using ultrasound pulses with different lengths. The results show that the axial resolution achieved with the ReSTS was superior to the cross-correlation method when the reflected pulses from two objects overlap. A novel B-mode imaging method, facilitating higher image resolution for distinct reflectors, is proposed.
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Affiliation(s)
- Josefin Starkhammar
- Department of Biomedical Engineering, Faculty of Engineering, Lund University, Lund, Sweden
| | - Isabella Reinhold
- Mathematical Statistics, Centre for Mathematical Sciences, Lund University, Lund, Sweden , , ,
| | - Tobias Erlöv
- Department of Biomedical Engineering, Faculty of Engineering, Lund University, Lund, Sweden
| | - Maria Sandsten
- Mathematical Statistics, Centre for Mathematical Sciences, Lund University, Lund, Sweden , , ,
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