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Ma XY, Yang T, Xiao J, Zhang P. The effects of zinc sulfate on mycelial enzyme activity and metabolites of Pholiota adiposa. PLoS One 2023; 18:e0295573. [PMID: 38127967 PMCID: PMC10735028 DOI: 10.1371/journal.pone.0295573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Accepted: 11/23/2023] [Indexed: 12/23/2023] Open
Abstract
The aim of this study was to investigate the effect of zinc sulphate on the activities of different enzymes and metabolites of Pholiota adiposa. In the experiment, we used the conventional enzyme activity assay to determine the changes of six indicators, including protein content, laccase activity, cellulase activity, amylase activity and polyphenol oxidase activity, under different concentrations of zinc sulphate treatment. The results showed that the activities of amylase, laccase, cellulase and peroxidase were Zn2+(200)>Zn2+(0)>Zn2+(400)>Zn2+(800).The activities of catalase and superoxide dismutase were Zn2+(200)>Zn2+(400)>Zn2+(800), and zinc sulfate could significantly affect the activity of polylipic squamase in a dose-dependent manner. Further correlation analysis showed that all six enzyme activities were significantly correlated with each other (P<001); the results of the statistical model test showed that the regression model constructed was statistically significant; overall the residuals met the conditions of normal distribution, and the corresponding points of different enzyme activities Q-Q' were more evenly distributed around y = x, and all fell in the 90% acceptance interval, thus the series was considered to obey normal distribution; the results of the principal The results of the principal component analysis showed that principal component 1 was positively correlated with amylase, laccase and cellulase. Principal component 2 was positively correlated with superoxide dismutase and catalase, and negatively correlated with peroxidase. The analysis of Metabonomic data revealed that zinc sulfate had a significant impact on the expression of metabolites in the mycelium. Moreover, varying concentrations of zinc sulfate exerted significant effects on the levels of amino acids, organic acids, and gluconic acid. This conclusion was confirmed by other experimental data. The results of the study provide a scientific reference for better research, development and utilization of Pholiota adiposa.
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Affiliation(s)
- Xiao-ying Ma
- The Edible Fungus Institute, Liaoning Academy of Agricultural Sciences, Shenyang, Liaoning, China
| | - Tao Yang
- The Edible Fungus Institute, Liaoning Academy of Agricultural Sciences, Shenyang, Liaoning, China
| | - Jun Xiao
- The Edible Fungus Institute, Liaoning Academy of Agricultural Sciences, Shenyang, Liaoning, China
| | - Peng Zhang
- The Edible Fungus Institute, Liaoning Academy of Agricultural Sciences, Shenyang, Liaoning, China
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Du D, Xiong H, Xu C, Zeng W, Li J, Dong G. Nutrient Metabolism Pathways Analysis and Key Candidate Genes Identification Corresponding to Cadmium Stress in Buckwheat through Multiomics Analysis. Genes (Basel) 2023; 14:1462. [PMID: 37510366 PMCID: PMC10378796 DOI: 10.3390/genes14071462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Revised: 07/05/2023] [Accepted: 07/12/2023] [Indexed: 07/30/2023] Open
Abstract
Fagopylum tatarium (L.) Gaertn (buckwheat) can be used both as medicine and food and is also an important food crop in barren areas and has great economic value. Exploring the molecular mechanisms of the response to cadmium (Cd) stress can provide the theoretical reference for improving the buckwheat yield and quality. In this study, perennial tartary buckwheat DK19 was used as the experimental material, its key metabolic pathways in the response to Cd stress were identified and verified through transcriptomic and metabolomic data analysis. In this investigation, 1798 metabolites were identified through non-targeted metabolomic analysis containing 1091 up-regulated and 984down-regulated metabolites after treatment. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis of differential metabolites was significantly enriched in galactose metabolism, glycerol metabolism, phenylpropane biosynthesis, glutathione metabolism, starch and sucrose metabolism. Linkage analysis detected 11 differentially expressed genes (DEGs) in the galactose metabolism pathway, 8 candidate DEGs in the lipid metabolism pathway, and 20 candidate DEGs in the glutathione metabolism pathway. The results of our study provided useful clues for genetically improving the resistance to cadmium by analyzing the molecular mechanism of cadmium tolerance in buckwheat.
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Affiliation(s)
- Dengxiang Du
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China
| | - Hanxian Xiong
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China
| | - Congping Xu
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China
| | - Wanyong Zeng
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China
| | - Jinhua Li
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China
| | - Guoqing Dong
- School of Life Science and Technology, Wuhan Polytechnic University, Wuhan 430023, China
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Huibo Z, Yong Z, Rui L, Guorui L, Jianjun D, Qi W, Xiaotian L, Mingda Y, Yanpeng W, Zhiyan W, Fenglan H. Analysis of the mechanism of Ricinus communis L. tolerance to Cd metal based on proteomics and metabolomics. PLoS One 2023; 18:e0272750. [PMID: 36862668 PMCID: PMC9980742 DOI: 10.1371/journal.pone.0272750] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Accepted: 01/26/2023] [Indexed: 03/03/2023] Open
Abstract
The pollution of soil with heavy metals is an increasingly serious worldwide problem, and cadmium (Cd) has attracted attention because of its high toxicity to almost all plants. Since castor tolerates the accumulation of heavy metals, it has the potential for heavy metal soil remediation. We studied the mechanism of the tolerance of castor to Cd stress treatments at three doses: 300 mg/L, 700 mg/L, and 1,000 mg/L. This research provides new ideas for revealing the defense and detoxification mechanisms of Cd-stressed castor. By combining the results of physiology, differential proteomics and comparative metabolomics, we conducted a comprehensive analysis of the networks that regulate the response of castor to Cd stress. The physiological results mainly emphasize the super-sensitive responses of castor plant roots to Cd stress and the effects of Cd stress on plants' antioxidant system, ATP synthesis and ion homeostasis. We confirmed these results at the protein and metabolite levels. In addition, proteomics and metabolomics indicated that under Cd stress, the expressions of proteins involved in defense and detoxification, energy metabolism and other metabolites such as organic acids and flavonoids were significantly up-regulated. At the same time, proteomics and metabolomics also show that castor plants mainly block the root system's absorption of Cd2+ by enhancing the strength of the cell wall, and inducing programmed cell death in response to the three different doses of Cd stress. In addition, the plasma membrane ATPase encoding gene (RcHA4), which was significantly upregulated in our differential proteomics and RT-qPCR studies, was transgenically overexpressed in wild type Arabidopsis thaliana for functional verification. The results indicated that this gene plays an important role in improving plant Cd tolerance.
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Affiliation(s)
- Zhao Huibo
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
| | - Zhao Yong
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
- College of Life Sciences, Baicheng Normal University, Baicheng, Jilin, 137099, China
| | - Luo Rui
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
| | - Li Guorui
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
| | - Di Jianjun
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
| | - Wen Qi
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
| | - Liang Xiaotian
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
| | - Yin Mingda
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
| | - Wen Yanpeng
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
| | - Wang Zhiyan
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
| | - Huang Fenglan
- School of Life Science and Food, Inner Mongolia University for Nationalities, Tongliao, Inner Mongolia, China
- Key Laboratory of Castor Breeding of the State Ethnic Affairs Commission, Tongliao, Inner Mongolia, China
- Inner Mongolia Key Laboratory of Castor Breeding, Tongliao, Inner Mongolia, China
- Inner Mongolia Engineering Research Center of Industrial Technology Innovation of Castor, Tongliao, Inner Mongolia, China
- Inner Mongolia Industrial Engineering Research Center of Universities for Castor, Tongliao, Inner Mongolia, China
- Inner Mongolia Collaborative Innovation Center for Castor Industry, Tongliao, Inner Mongolia, China
- * E-mail:
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Song F, Zhang G, Li H, Ma L, Yang N. Comparative transcriptomic analysis of Stenotrophomonas sp. MNB17 revealed mechanisms of manganese tolerance at different concentrations and the role of histidine biosynthesis in manganese removal. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2022; 244:114056. [PMID: 36075124 DOI: 10.1016/j.ecoenv.2022.114056] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 08/21/2022] [Accepted: 09/03/2022] [Indexed: 06/15/2023]
Abstract
Bacteria possess protective mechanisms against excess Mn(Ⅱ) to reduce its toxicity. Stenotrophomonas sp. MNB17 showed high Mn(Ⅱ) removal capacity (92.24-99.16 %) by forming Mn-precipitates (MnCO3 and Mn-oxides), whose Mn-oxides content increased with increasing Mn(Ⅱ) concentrations (10-50 mM). Compared with 0 mM Mn(Ⅱ)-stressed cells, transcriptomic analysis identified genes with the same transcriptional trends in 10 mM and 50 mM Mn(Ⅱ)-stressed cells, including genes involved in metal transport, cell envelope homeostasis, and histidine biosynthesis, as well as genes with different transcriptional trends, such as those involved in oxidative stress response, glyoxylate cycle, electron transport, and protein metabolism. The upregulation of histidine biosynthesis and oxidative stress responses were the most prominent features of these metabolisms under Mn(Ⅱ) stress. We confirmed that the increased level of reactive oxygen species was one of the reasons for the increased Mn-oxides formation at high Mn(Ⅱ) concentrations. Metabolite analysis indicated that the enhanced histidine biosynthesis rather than the tricarboxylic acid cycle resulted in an elevated level of α-ketoglutarate, which helped eliminate reactive oxygen species. Consistent with these results, the exogenous addition of histidine significantly reduced the production of reactive oxygen species and Mn-oxides and enhanced the removal of Mn(Ⅱ) as MnCO3. This study is the first to correlate histidine biosynthesis, reactive oxygen species, and Mn-oxides formation at high Mn(Ⅱ) concentrations, providing novel insights into the molecular regulatory mechanisms associated with Mn(Ⅱ) removal in bacteria.
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Affiliation(s)
- Fuhang Song
- School of Light Industry, Beijing Technology and Business University, 11 Fucheng Road, Beijing 100048, China
| | - Guoliang Zhang
- Center of Deep Sea Research, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao 266071, China
| | - Honghua Li
- School of Light Industry, Beijing Technology and Business University, 11 Fucheng Road, Beijing 100048, China
| | - Linlin Ma
- Griffith Institute for Drug Discovery, Griffith University, Australia; School of Environment and Science, Griffith University, Australia
| | - Na Yang
- CAS Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao 266071, China; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, 1 Wenhai Road, Qingdao 266237, China.
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