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Martine CT. Fluidity and Inconstancy: Australian Bush Tomatoes as an Exemplar of Non-Normative Sex Expression. Integr Comp Biol 2023; 63:886-890. [PMID: 37263794 PMCID: PMC10563652 DOI: 10.1093/icb/icad051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Revised: 04/23/2023] [Accepted: 05/05/2023] [Indexed: 06/03/2023] Open
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Cantley JT, Jordon-Thaden IE, Roche MD, Hayes D, Kate S, Martine CT. A Foundational Population Genetics Investigation of the Sexual Systems of Solanum (Solanaceae) in the Australian Monsoon Tropics Suggests Dioecious Taxa May Benefit from Increased Genetic Admixture via Obligate Outcrossing. PLANTS (BASEL, SWITZERLAND) 2023; 12:plants12112200. [PMID: 37299179 DOI: 10.3390/plants12112200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 05/21/2023] [Accepted: 05/26/2023] [Indexed: 06/12/2023]
Abstract
Solanum section Leptostemonum is an ideal lineage to test the theoretical framework regarding proposed evolutionary benefits of outcrossing sexual systems in comparison to cosexuality. Theoretically, non-cosexual taxa should support more genetic diversity within populations, experience less inbreeding, and have less genetic structure due to a restricted ability to self-fertilize. However, many confounding factors present challenges for a confident inference that inherent differences in sexual systems influence observed genetic patterns among populations. This study provides a foundational baseline of the population genetics of several species of different sexual systems with the aim of generating hypotheses of any factor-including sexual system-that influences genetic patterns. Importantly, results indicate that dioecious S. asymmetriphyllum maintains less genetic structure and greater admixture among populations than cosexual S. raphiotes at the same three locations where they co-occur. This suggests that when certain conditions are met, the evolution of dioecy may have proceeded as a means to avoid genetic consequences of self-compatibility and may support hypotheses of benefits gained through differential resource allocation partitioned across sexes. Arguably, the most significant finding of this study is that all taxa are strongly inbred, possibly reflective of a shared response to recent climate shifts, such as the increased frequency and intensity of the region's fire regime.
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Affiliation(s)
- Jason T Cantley
- Department of Biology, San Francisco State University, San Francisco, CA 94132, USA
- Biology Department, Bucknell University, Lewisburg, PA 17837, USA
| | - Ingrid E Jordon-Thaden
- Biology Department, Bucknell University, Lewisburg, PA 17837, USA
- Department of Botany, University of Wisconsin Madison, Madison, WI 53706, USA
| | - Morgan D Roche
- Biology Department, Bucknell University, Lewisburg, PA 17837, USA
- Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37996, USA
| | - Daniel Hayes
- Biology Department, Bucknell University, Lewisburg, PA 17837, USA
| | - Stephanie Kate
- Department of Biology, San Francisco State University, San Francisco, CA 94132, USA
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Knapp S. A revision of Lycianthes (Solanaceae) in Australia, New Guinea, and the Pacific. PHYTOKEYS 2022; 209:1-134. [PMID: 36762125 PMCID: PMC9848948 DOI: 10.3897/phytokeys.209.87681] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/12/2022] [Accepted: 08/26/2022] [Indexed: 06/18/2023]
Abstract
The genus Lycianthes (Dunal) Hassl. (Solanaceae) has in the past been treated as a section of the large genus Solanum L., but is more closely related to Capsicum L. The eighteen species of Lycianthes occurring in Australia, New Guinea (defined as the island of New Guinea, comprising Papua New Guinea [incl. Bougainville] and the Indonesian provinces of Papua Barat and Papua, plus the surrounding islands connected during the last glacial maximum) and the Pacific Islands are here treated in full, with complete descriptions, including synonymy, typifications and synonyms, distribution maps and illustrations. The history of taxonomic treatment of the genus in the region is also discussed. These taxa occupy a diverse range of forested habitats, and are in diverse in habit, from small shrubs to large canopy lianas to epiphytic shrubs. They are for the most part rarely collected, and many are endemic (14 of the 18 species treated here). Australia has a single endemic Lycianthes species (L.shanesii (F.Muell.) A.R.Bean). Nine species are found in both Indonesia and Papua New Guinea, one in Indonesia only, four in Papua New Guinea only, and L.vitiensis (Seem). A.R.Bean is known from Bougainville (Papua New Guinea) and the south Pacific as far east as Samoa. Lyciantheslucens S.Knapp sp. nov. is described from the islands of Lihir, New Ireland and the Louisiade Archipelago of Papua New Guinea. The cultivated L.rantonnetii (Carrière) Bitter is also treated in full, in this region known currently only from Australia; it is native to southern South America. Preliminary conservation assessments are presented for all species except the cultivated L.rantonnetii.
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Affiliation(s)
- Sandra Knapp
- Natural History Museum, Cromwell Road, London SW7 5BD, UKThe Natural History MuseumLondonUnited Kingdom
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Aubriot X, Knapp S. A revision of the "spiny solanums" of Tropical Asia ( Solanum, the Leptostemonum Clade, Solanaceae). PHYTOKEYS 2022; 198:1-270. [PMID: 36760991 PMCID: PMC9849010 DOI: 10.3897/phytokeys.198.79514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/18/2021] [Accepted: 04/20/2022] [Indexed: 06/18/2023]
Abstract
The Leptostemonum Clade, or the "spiny solanums", is the most species-rich monophyletic clade of the large cosmopolitan genus Solanum (Solanaceae) and represents almost half the species diversity of the genus. Species diversity in the clade is highest in the Americas, but significant clusters of endemic taxa occur in the Eastern Hemisphere. We present here a taxonomic revision of the 51 species of spiny solanums occurring in tropical Asia (excluding the island of New Guinea, and the lowlands of Nepal and Bhutan). Three species are described as new: Solanumkachinense X.Aubriot & S.Knapp, sp. nov. from northern Myanmar, S.peikuoense S.S.Ying, sp. nov. from Taiwan, and S.sulawesi X.Aubriot & S.Knapp, sp. nov. from northern Sulawesi, Indonesia. Of the spiny solanums occurring in the region, 38 are native and 13 are introduced from the Americas or Africa, either as adventive weeds or as cultivated plants. Phylogenetic resolution amongst these taxa is still a work in progress, so we have chosen to treat these taxa in a geographical context to aid with identification and further taxon discovery. For the native species we provide complete nomenclatural details for all recognised species and their synonyms, complete descriptions, distributions including maps, common names and uses, and preliminary conservation assessments. For the introduced taxa that have been treated in detail elsewhere we provide details of types, synonyms based on tropical Asian material, general distributions, and common names for the region. We provide lecto- or neotypifications for 67 names; 63 for native and 4 for introduced taxa. All taxa are discussed and compared to similar species; keys are provided for all taxa. We illustrate all native species with herbarium and field photographs and introduced species with field photographs only. All specimens examined for this treatment are included in Suppl. materials 1-3 as searchable files.
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Affiliation(s)
- Xavier Aubriot
- Université Paris-Saclay, CNRS, AgroParisTech, Ecologie Systématique et Evolution, 91190, Gif-sur-Yvette, FranceThe Natural History MuseumLondonUnited Kingdom
- The Natural History Museum, Cromwell Road, London SW7 5BD, UKUniversité Paris-SaclayParisFrance
| | - Sandra Knapp
- The Natural History Museum, Cromwell Road, London SW7 5BD, UKUniversité Paris-SaclayParisFrance
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Ndem‐Galbert JR, Hall JE, McDonnell AJ, Martine CT. Differential reward in "male" versus "female" pollen of functionally dioecious Solanum. AMERICAN JOURNAL OF BOTANY 2021; 108:2282-2293. [PMID: 34643272 PMCID: PMC9298796 DOI: 10.1002/ajb2.1765] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Revised: 08/24/2021] [Accepted: 08/27/2021] [Indexed: 06/12/2023]
Abstract
PREMISE Five to six percent of angiosperm species exhibit a dioecious sexual system, with unisexual "male" or "female" flowers borne on separate plants. The consequent need for inter-individual pollen exchange is a special challenge for taxa where pollen is the sole pollinator reward. Dioecious Australian Solanum assure visits from pollen-foraging bees via production of inaperturate pollen in functionally female (morphologically bisexual) flowers. Biochemical composition of pollen from Australian Solanum has not been assessed nor compared to porate pollen from staminate flowers to reveal whether these flowers differ in their pollinator reward potential. METHODS Porate pollen from male flowers and inaperturate pollen from functionally female flowers of two functionally dioecious Australian species were compared for protein and amino acid content. We also assessed pollen from bisexual and staminate flowers of a closely related andromonoecious species, in which all pollen is porate, as a comparison across co-occurring sexual systems. RESULTS In both functionally dioecious species, porate pollen grains from staminate flowers had significantly higher levels of proteins and amino acids than inaperturate pollen grains from functionally female flowers. Levels of proteins and amino acids were highest in bisexual and staminate flowers of the andromonoecious species. CONCLUSIONS Higher levels of proteins and amino acids in porate pollen of "male" flowers in our functionally dioecious Solanum species suggests a greater nutritive reward for bees foraging on "male" plants than for those foraging on functionally "female" plants. Greater reward in porate pollen (including andromonoecious species) may be connected to the potential to generate a pollen tube.
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Affiliation(s)
- Jackie R. Ndem‐Galbert
- Bucknell University, Biology Department1 Dent DriveLewisburgPA17837USA
- ETH Zurich, Department of Health Sciences and TechnologyVladimr‐Prelog route 1‐5/10, 8093 ZurichSwitzerland
| | - Jessica E. Hall
- Ohio Dominican University, Department of Biology, 1216 Sunbury RoadColumbusOH43219USA
| | - Angela J. McDonnell
- Negaunee Institute for Plant Conservation Science and ActionChicago Botanic Garden, 1000 Lake Cook RoadGlencoeIL60022USA
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Barrios S, Monsegur-Rivera OA, Heller TM, Harrigan N, Grant KA, Gibney E, Clubbe CP, Hamilton MA. Range extension and conservation status of the rare Solanaceae shrub, Solanum conocarpum. Biodivers Data J 2021; 9:e69156. [PMID: 34393587 PMCID: PMC8324583 DOI: 10.3897/bdj.9.e69156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Accepted: 06/26/2021] [Indexed: 11/30/2022] Open
Abstract
Background The British Virgin Islands and the US Virgin Islands, two island groups located in the Caribbean archipelago, hold unique plant diversity and high endemism. Until recently, Solanumconocarpum was considered a rare plant species endemic to the island of St. John in the US Virgin Islands. Ongoing botanical surveys in this region are revealing new populations and refining our understanding of the distribution of these narrow endemic plant species. The objective of this paper is to assess the conservation status of S.conocarpum, including a review of its geographic range, population numbers, threats and conservation actions needed for its long-term survival. New information In this paper, we present new occurrences for S.conocarpum, extending its geographic range to a new island, Tortola and new territory, the British Virgin Islands. Despite this range expansion, this species is evaluated as Endangered (EN), based on Criteria B1b(iii,v)+2b(iii,v)+C2a(i), according to the IUCN Red List Categories and Criteria. The extent of occurrence (EOO = 46 km2) and area of occupancy (AOO = 20 km2) are highly restricted. On St. John (US Virgin Islands), the historically recorded individuals at Reef Bay, Europa Ridge and Sabbat Point are now considered extirpated due to disturbance from development compounded by invasive species, as well as the impact of feral ungulates and drought stress. These threats are impacting the species across the whole island of St. John and contributing to a continuing decline of suitable habitat, despite the island being a National Park. On the island of Tortola, the species occurs on unprotected lands subject to development and habitat modification and decline by feral ungulates. Based on these threats acting separately across the two islands, two locations were defined. The estimated total number of mature individuals ranges between 150 and 250, with the largest subpopulation at Nanny Point in the US Virgin Islands, containing 108 mature individuals. Conservation action, focused on protecting this species' habitat, is urgently needed.
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Affiliation(s)
- Sara Barrios
- Royal Botanic Gardens, Kew, Richmond, United Kingdom Royal Botanic Gardens, Kew Richmond United Kingdom
| | - Omar A Monsegur-Rivera
- US Fish and Wildlife Service, Boquerón, Puerto Rico US Fish and Wildlife Service Boquerón Puerto Rico
| | - Thomas M Heller
- Royal Botanic Gardens, Kew, Richmond, United Kingdom Royal Botanic Gardens, Kew Richmond United Kingdom
| | - Natasha Harrigan
- National Parks Trust of the Virgin Islands, Road Town, Virgin Islands (British) National Parks Trust of the Virgin Islands Road Town Virgin Islands (British)
| | - Keith A Grant
- National Parks Trust of the Virgin Islands, Road Town, Virgin Islands (British) National Parks Trust of the Virgin Islands Road Town Virgin Islands (British)
| | - Eleanor Gibney
- Independent Researcher, Saint John, Virgin Islands (USA) Independent Researcher Saint John Virgin Islands (USA)
| | - Colin P Clubbe
- Royal Botanic Gardens, Kew, Richmond, United Kingdom Royal Botanic Gardens, Kew Richmond United Kingdom
| | - Martin A Hamilton
- Royal Botanic Gardens, Kew, Richmond, United Kingdom Royal Botanic Gardens, Kew Richmond United Kingdom.,Oak Spring Garden Foundation, Upperville, VA, United States of America Oak Spring Garden Foundation Upperville, VA United States of America
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Essenberg CJ. Intraspecific relationships between floral signals and rewards with implications for plant fitness. AOB PLANTS 2021; 13:plab006. [PMID: 33708371 PMCID: PMC7937183 DOI: 10.1093/aobpla/plab006] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/01/2020] [Accepted: 01/11/2021] [Indexed: 06/12/2023]
Abstract
Within-species variation in traits such as petal size or colour often provides reliable information to pollinators about the rewards offered to them by flowers. In spite of potential disadvantages of allowing pollinators to discriminate against less-rewarding flowers, examples of informative floral signals are diverse in form and widely distributed across plant taxa, apparently having evolved repeatedly in different lineages. Although hypotheses about the adaptive value of providing reward information have been proposed and tested in a few cases, a unified effort to understand the evolutionary mechanisms favouring informative floral signals has yet to emerge. This review describes the diversity of ways in which floral signals can be linked with floral rewards within plant species and discusses the constraints and selective pressures on floral signal-reward relationships. It focuses particularly on how information about floral rewards can influence pollinator behaviour and how those behavioural changes may, in turn, affect plant fitness, selecting either for providing or withholding reward information. Most of the hypotheses about the evolution of floral signal-reward relationships are, as yet, untested, and the review identifies promising research directions for addressing these considerable gaps in knowledge. The advantages and disadvantages of sharing floral reward information with pollinators likely play an important role in floral trait evolution, and opportunities abound to further our understanding of this neglected aspect of floral signalling.
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Wu M, Haak DC, Anderson GJ, Hahn MW, Moyle LC, Guerrero RF. Inferring the Genetic Basis of Sex Determination from the Genome of a Dioecious Nightshade. Mol Biol Evol 2021; 38:2946-2957. [PMID: 33769517 PMCID: PMC8233512 DOI: 10.1093/molbev/msab089] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
Dissecting the genetic mechanisms underlying dioecy (i.e., separate female and male individuals) is critical for understanding the evolution of this pervasive reproductive strategy. Nonetheless, the genetic basis of sex determination remains unclear in many cases, especially in systems where dioecy has arisen recently. Within the economically important plant genus Solanum (∼2,000 species), dioecy is thought to have evolved independently at least 4 times across roughly 20 species. Here, we generate the first genome sequence of a dioecious Solanum and use it to ascertain the genetic basis of sex determination in this species. We de novo assembled and annotated the genome of Solanum appendiculatum (assembly size: ∼750 Mb scaffold N50: 0.92 Mb; ∼35,000 genes), identified sex-specific sequences and their locations in the genome, and inferred that males in this species are the heterogametic sex. We also analyzed gene expression patterns in floral tissues of males and females, finding approximately 100 genes that are differentially expressed between the sexes. These analyses, together with observed patterns of gene-family evolution specific to S. appendiculatum, consistently implicate a suite of genes from the regulatory network controlling pectin degradation and modification in the expression of sex. Furthermore, the genome of a species with a relatively young sex-determination system provides the foundational resources for future studies on the independent evolution of dioecy in this clade.
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Affiliation(s)
- Meng Wu
- Department of Biology, Indiana University, Bloomington, IN, USA
| | - David C Haak
- School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, VA, USA
| | - Gregory J Anderson
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA
| | - Matthew W Hahn
- Department of Biology, Indiana University, Bloomington, IN, USA.,Department of Computer Science, Indiana University, Bloomington, IN, USA
| | - Leonie C Moyle
- Department of Biology, Indiana University, Bloomington, IN, USA
| | - Rafael F Guerrero
- Department of Computer Science, Indiana University, Bloomington, IN, USA.,Department of Biological Sciences, North Carolina State University, Raleigh, NC, USA
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Carey S, Yu Q, Harkess A. The Diversity of Plant Sex Chromosomes Highlighted through Advances in Genome Sequencing. Genes (Basel) 2021; 12:381. [PMID: 33800038 PMCID: PMC8000587 DOI: 10.3390/genes12030381] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Revised: 03/02/2021] [Accepted: 03/03/2021] [Indexed: 01/21/2023] Open
Abstract
For centuries, scientists have been intrigued by the origin of dioecy in plants, characterizing sex-specific development, uncovering cytological differences between the sexes, and developing theoretical models. Through the invention and continued improvements in genomic technologies, we have truly begun to unlock the genetic basis of dioecy in many species. Here we broadly review the advances in research on dioecy and sex chromosomes. We start by first discussing the early works that built the foundation for current studies and the advances in genome sequencing that have facilitated more-recent findings. We next discuss the analyses of sex chromosomes and sex-determination genes uncovered by genome sequencing. We synthesize these results to find some patterns are emerging, such as the role of duplications, the involvement of hormones in sex-determination, and support for the two-locus model for the origin of dioecy. Though across systems, there are also many novel insights into how sex chromosomes evolve, including different sex-determining genes and routes to suppressed recombination. We propose the future of research in plant sex chromosomes should involve interdisciplinary approaches, combining cutting-edge technologies with the classics to unravel the patterns that can be found across the hundreds of independent origins.
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Affiliation(s)
- Sarah Carey
- Department of Crop, Soil, and Environmental Sciences, Auburn University, Auburn, AL 36849, USA;
- HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA
| | - Qingyi Yu
- Texas A&M AgriLife Research, Texas A&M University System, Dallas, TX 75252, USA
| | - Alex Harkess
- Department of Crop, Soil, and Environmental Sciences, Auburn University, Auburn, AL 36849, USA;
- HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA
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