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Izzati F, Warsito MF, Bayu A, Prasetyoputri A, Atikana A, Sukmarini L, Rahmawati SI, Putra MY. Chemical Diversity and Biological Activity of Secondary Metabolites Isolated from Indonesian Marine Invertebrates. Molecules 2021; 26:1898. [PMID: 33801617 PMCID: PMC8037762 DOI: 10.3390/molecules26071898] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 03/22/2021] [Accepted: 03/23/2021] [Indexed: 12/22/2022] Open
Abstract
Marine invertebrates have been reported to be an excellent resource of many novel bioactive compounds. Studies reported that Indonesia has remarkable yet underexplored marine natural products, with a high chemical diversity and a broad spectrum of biological activities. This review discusses recent updates on the exploration of marine natural products from Indonesian marine invertebrates (i.e., sponges, tunicates, and soft corals) throughout 2007-2020. This paper summarizes the structural diversity and biological function of the bioactive compounds isolated from Indonesian marine invertebrates as antimicrobial, antifungal, anticancer, and antiviral, while also presenting the opportunity for further investigation of novel compounds derived from Indonesian marine invertebrates.
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Affiliation(s)
| | | | - Asep Bayu
- Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Jakarta-Bogor KM 46 Cibinong, Bogor, West Java 16911, Indonesia or (F.I.); (M.F.W.); (A.P.); (A.A.); (L.S.); (S.I.R.)
| | | | | | | | | | - Masteria Yunovilsa Putra
- Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Jakarta-Bogor KM 46 Cibinong, Bogor, West Java 16911, Indonesia or (F.I.); (M.F.W.); (A.P.); (A.A.); (L.S.); (S.I.R.)
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Hanif N, Murni A, Tanaka C, Tanaka J. Marine Natural Products from Indonesian Waters. Mar Drugs 2019; 17:md17060364. [PMID: 31248122 PMCID: PMC6627775 DOI: 10.3390/md17060364] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Revised: 06/10/2019] [Accepted: 06/11/2019] [Indexed: 12/13/2022] Open
Abstract
Natural products are primal and have been a driver in the evolution of organic chemistry and ultimately in science. The chemical structures obtained from marine organisms are diverse, reflecting biodiversity of genes, species and ecosystems. Biodiversity is an extraordinary feature of life and provides benefits to humanity while promoting the importance of environment conservation. This review covers the literature on marine natural products (MNPs) discovered in Indonesian waters published from January 1970 to December 2017, and includes 732 original MNPs, 4 structures isolated for the first time but known to be synthetic entities, 34 structural revisions, 9 artifacts, and 4 proposed MNPs. Indonesian MNPs were found in 270 papers from 94 species, 106 genera, 64 families, 32 orders, 14 classes, 10 phyla, and 5 kingdoms. The emphasis is placed on the structures of organic molecules (original and revised), relevant biological activities, structure elucidation, chemical ecology aspects, biosynthesis, and bioorganic studies. Through the synthesis of past and future data, huge and partly undescribed biodiversity of marine tropical invertebrates and their importance for crucial societal benefits should greatly be appreciated.
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Affiliation(s)
- Novriyandi Hanif
- Department of Chemistry, Faculty of Mathematics and Natural Sciences, IPB University (Bogor Agricultural University), Bogor 16680, Indonesia.
| | - Anggia Murni
- Tropical Biopharmaca Research Center, IPB University (Bogor Agricultural University), Bogor 16128, Indonesia.
| | - Chiaki Tanaka
- Department of Natural Products Chemistry, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka 812-8582, Japan.
| | - Junichi Tanaka
- Department of Chemistry, Biology, and Marine Science, University of the Ryukyus, Nishihara, Okinawa 903-0213, Japan.
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Grand Challenges in Marine Biotechnology: Overview of Recent EU-Funded Projects. GRAND CHALLENGES IN MARINE BIOTECHNOLOGY 2018. [DOI: 10.1007/978-3-319-69075-9_11] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Kuranaga T, Enomoto A, Tan H, Fujita K, Wakimoto T. Total Synthesis of Theonellapeptolide Id. Org Lett 2017; 19:1366-1369. [DOI: 10.1021/acs.orglett.7b00249] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Takefumi Kuranaga
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Kita-12, Nishi-6, Kita-ku, Sapporo 060-0812, Japan
| | - Ayumu Enomoto
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Kita-12, Nishi-6, Kita-ku, Sapporo 060-0812, Japan
| | - Hui Tan
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Kita-12, Nishi-6, Kita-ku, Sapporo 060-0812, Japan
| | - Kazuto Fujita
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Kita-12, Nishi-6, Kita-ku, Sapporo 060-0812, Japan
| | - Toshiyuki Wakimoto
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Kita-12, Nishi-6, Kita-ku, Sapporo 060-0812, Japan
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Rodríguez J, Jiménez C, Blanco M, Tarazona G, Fernández R, Cuevas C. Lanesoic Acid: A Cytotoxic Zwitterion from Theonella sp. Org Lett 2016; 18:5832-5835. [PMID: 27802052 DOI: 10.1021/acs.orglett.6b02832] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Lanesoic acid (1) was isolated and characterized from Theonella sp. during PharmaMar's ongoing program to study cytotoxic substances from marine sources. Its planar structure, elucidated by spectral analysis (NMR, IR, UV, and MS), possesses an unusual skeleton containing a tetrahydropyrimidine cation that is stabilized as a zwitterion by an internal carboxylate counterion. The stereostructure of 1 was deduced from ROESY-NOESY, J-based configurational analysis (JBCA), and density functional theory (DFT) computational calculations fitted using the recently published DP4+ parameter. Compound 1 was moderately active and selective against pancreas PSN1 cells (IC50 = 8.9 μg/mL) and inactive against colon HT-29, breast MD-MB-23, and NSCLC lung tumor cells.
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Affiliation(s)
- Jaime Rodríguez
- Departamento de Química Fundamental, Facultade de Ciencias e Centro de Investigacións Científicas Avanzadas (CICA) Rua As Carballeiras s/n, Universidade da Coruña , 15071 A Coruña, Spain
| | - Carlos Jiménez
- Departamento de Química Fundamental, Facultade de Ciencias e Centro de Investigacións Científicas Avanzadas (CICA) Rua As Carballeiras s/n, Universidade da Coruña , 15071 A Coruña, Spain
| | - María Blanco
- Departamento de Química Fundamental, Facultade de Ciencias e Centro de Investigacións Científicas Avanzadas (CICA) Rua As Carballeiras s/n, Universidade da Coruña , 15071 A Coruña, Spain
| | - Guillermo Tarazona
- Natural Products Department, PharmaMar S.A., Pol. Ind. La Mina Norte , Avda de los Reyes 1, 28770 Colmenar Viejo, Spain
| | - Rogelio Fernández
- Natural Products Department, PharmaMar S.A., Pol. Ind. La Mina Norte , Avda de los Reyes 1, 28770 Colmenar Viejo, Spain
| | - Carmen Cuevas
- Natural Products Department, PharmaMar S.A., Pol. Ind. La Mina Norte , Avda de los Reyes 1, 28770 Colmenar Viejo, Spain
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Abstract
This review covers the literature published in 2013 for marine natural products (MNPs), with 982 citations (644 for the period January to December 2013) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1163 for 2013), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.
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Affiliation(s)
- John W Blunt
- Department of Chemistry, University of Canterbury, Christchurch, New Zealand.
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Chianese G, Sepe V, Limongelli V, Renga B, D'Amore C, Zampella A, Taglialatela-Scafati O, Fiorucci S. Incisterols, highly degraded marine sterols, are a new chemotype of PXR agonists. Steroids 2014; 83:80-5. [PMID: 24582706 DOI: 10.1016/j.steroids.2014.02.003] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/02/2013] [Revised: 02/17/2014] [Accepted: 02/20/2014] [Indexed: 12/15/2022]
Abstract
During the chromatographic purification of organic extracts obtained from Plakortis cfr. lita we obtained three highly degraded steroid derivatives, the known incisterol A2 (1) and the new incisterols A5 (2) and A6 (3). The new compounds were characterized basing on NMR and MS evidences along with comparison with model compounds. Incisterol A5 proved to bear a 17S-ethyl-15E,18-diene (incisterol numbering system) side chain, found for the first time in a marine organism. The new incisterols A5 and A6 proved to be potent inducers of transactivation of the pregnane X receptor (PXR) and they also stimulate the expression of CYP7A4 and MDR1 with a potency comparable to that of Rifaximin. These observations prompt to consider incisterols A5 and A6 as new potent agonists of PXR. On the other hand, the 17R-methyl analogue incisterol A2 shows only a poor PXR agonist activity. Molecular docking simulations elucidated the binding mechanism of the active incisterols in the ligand binding domain of PXR.
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Affiliation(s)
- Giuseppina Chianese
- Dipartimento di Farmacia, Università di Napoli "Federico II", Via D. Montesano, 49, I-80131 Napoli, Italy
| | - Valentina Sepe
- Dipartimento di Farmacia, Università di Napoli "Federico II", Via D. Montesano, 49, I-80131 Napoli, Italy
| | - Vittorio Limongelli
- Dipartimento di Farmacia, Università di Napoli "Federico II", Via D. Montesano, 49, I-80131 Napoli, Italy
| | - Barbara Renga
- Dipartimento di Medicina Clinica e Sperimentale, Nuova Facoltà di Medicina, Via Gambuli 1, 06132 Perugia, Italy
| | - Claudio D'Amore
- Dipartimento di Medicina Clinica e Sperimentale, Nuova Facoltà di Medicina, Via Gambuli 1, 06132 Perugia, Italy
| | - Angela Zampella
- Dipartimento di Farmacia, Università di Napoli "Federico II", Via D. Montesano, 49, I-80131 Napoli, Italy
| | | | - Stefano Fiorucci
- Dipartimento di Medicina Clinica e Sperimentale, Nuova Facoltà di Medicina, Via Gambuli 1, 06132 Perugia, Italy
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