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A Molecular Systematics and Taxonomy Research on Trechispora (Hydnodontaceae, Trechisporales): Concentrating on Three New Trechispora Species from East Asia. J Fungi (Basel) 2022; 8:jof8101020. [PMID: 36294585 PMCID: PMC9604563 DOI: 10.3390/jof8101020] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2022] [Revised: 09/17/2022] [Accepted: 09/24/2022] [Indexed: 11/22/2022] Open
Abstract
Trechispora are an important genus of wood-inhabiting fungi that have the ability to decompose rotten wood in the forest ecosystem. In this study, we reported three new species of Trechispora: T. murina, T. odontioidea, T. olivacea from a subtropical region of Yunnan Province, China. Species descriptions were based on a combination of morphological features and phylogenetic analyses of the ITS and LSU region of nuclear ribosomal DNA. Trechispora murina is characterized by the resupinate basidiomata, grandinioid hymenial surface with a greyish tint, monomitic hyphal system and ellipsoid, thick-walled, ornamented basidiospores; T. odontioidea has an odontioid hymenial surface with cylindrical to conical, blunt aculei and subglobose to globose, colorless, slightly thick-walled, ornamented basidiospores; T. olivacea has a farinaceous hymenial surface with olivaceous tint, basidia clavate and thick-walled, ornamented, broadly ellipsoid to globose basidiospores. Sequences of the ITS and nLSU rDNA markers of the studied samples were generated, and phylogenetic analyses were performed with maximum likelihood, maximum parsimony, and Bayesian inference methods. After a series of phylogenetic analyses, the 5.8S+nLSU dataset was constructed to test the phylogenetic relationship of Trechispora with other genera of Hydnodontaceae. The ITS dataset was used to evaluate the phylogenetic relationship of the three new species with other species of Trechispora. Using ITS phylogeny, the new species T. murina was retrieved as a sister to T. bambusicola with moderate supports; T. odontioidea formed a single lineage and then grouped with T. fimbriata and T. nivea; while T. olivacea formed a monophyletic lineage with T. farinacea, T. hondurensis, and T. mollis.
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Ayala-Vásquez O, García-Jiménez J, Aguirre-Acosta E, Castro-Rivera R, Ángeles-Argáiz RE, Saldivar ÁE, Garibay-Orijel R. Hemiaustroboletus, a new genus in the subfamily Austroboletoideae (Boletaceae, Boletales). MycoKeys 2022; 88:55-78. [PMID: 35585930 PMCID: PMC9005474 DOI: 10.3897/mycokeys.88.73951] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2021] [Accepted: 03/09/2022] [Indexed: 11/12/2022] Open
Abstract
The present study describes Hemiaustroboletusgen. nov. in the subfamily Austroboletoideae (Boletaceae). Hemiaustroboletus is supported by morphological and molecular data using LSU and RPB2 regions. Additionally, its geographic distribution and intraspecific variation were inferred using ITS sequences. The genus is characterised by pileate-stipitate basidiomata; purple, brown, reddish-brown, orange-brown to dark brown vinaceous pileus; whitish or lilac to vinaceous context and a subclavate stipe. Microscopically, it is characterised by ornamented, slightly verrucose, cracked to perforated brown basidiospores. Two species are described within the genus, Hemiaustroboletus vinaceobrunneussp. nov. and H. vinaceussp. nov.Hemiaustroboletus vinaceussp. nov. is morphologically similar to Austroboletus gracilis, which suggests they may have been confused in the past. This study presents the phylogenetic placement, microscopic structures, detailed morphological descriptions and illustrations of both new species.
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Gelardi M, Angelini C, Costanzo F, Ercole E, Ortiz-Santana B, Vizzini A. Outstanding Pinkish Brown-Spored Neotropical Boletes: Austroboletus subflavidus and Fistulinella gloeocarpa (Boletaceae, Boletales) from the Dominican Republic. MYCOBIOLOGY 2020; 49:24-45. [PMID: 33536810 PMCID: PMC7832513 DOI: 10.1080/12298093.2020.1843221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/23/2020] [Revised: 10/19/2020] [Accepted: 10/22/2020] [Indexed: 06/12/2023]
Abstract
The occurrence of Austroboletus subflavidus and Fistulinella gloeocarpa is documented from the Dominican Republic. The latter species is reported for the first time outside its original locality in Martinique, extending the geographic range for this uncommon pinkish-spored bolete. A detailed morphological description is provided for each species and accompanied by color pictures of fresh basidiomes in habitat and line drawings of the main anatomical features. Both species represent independent lineages within their respective genera based on phylogenetic inference. In addition, A. subflavidus clusters in a sister lineage to the core Austroboletus clade (Austroboletus clade I) here named as Austroboletus clade II. In order to confirm the accuracy of species identification, their identity and relationships were subjected to multilocus phylogenetic analyses of three gene markers (ITS, nrLSU, RPB2) including genetic material already available in public databases. Austroboletus subflavidus is a widely distributed species in North and Central America, whereas F. gloeocarpa is apparently highly localized and seems to appear sparingly in the Dominican Republic, Martinque, and southern Florida. Comparisons with morphologically similar and molecularly inferred allied species are also presented and discussed.
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Affiliation(s)
| | - Claudio Angelini
- Pordenone, Italy
- National Botanical Garden of Santo Domingo, Santo Domingo, Dominican Republic
| | | | - Enrico Ercole
- Department of Life Science and Systems Biology, University of Turin, Torino, Italy
| | - Beatriz Ortiz-Santana
- USDA Forest Service, Northern Research Station, Center for Forest Mycology Research, Madison, WI, USA
| | - Alfredo Vizzini
- Department of Life Science and Systems Biology, University of Turin, Torino, Italy
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He MQ, Zhao RL, Hyde KD, Begerow D, Kemler M, Yurkov A, McKenzie EHC, Raspé O, Kakishima M, Sánchez-Ramírez S, Vellinga EC, Halling R, Papp V, Zmitrovich IV, Buyck B, Ertz D, Wijayawardene NN, Cui BK, Schoutteten N, Liu XZ, Li TH, Yao YJ, Zhu XY, Liu AQ, Li GJ, Zhang MZ, Ling ZL, Cao B, Antonín V, Boekhout T, da Silva BDB, De Crop E, Decock C, Dima B, Dutta AK, Fell JW, Geml J, Ghobad-Nejhad M, Giachini AJ, Gibertoni TB, Gorjón SP, Haelewaters D, He SH, Hodkinson BP, Horak E, Hoshino T, Justo A, Lim YW, Menolli N, Mešić A, Moncalvo JM, Mueller GM, Nagy LG, Nilsson RH, Noordeloos M, Nuytinck J, Orihara T, Ratchadawan C, Rajchenberg M, Silva-Filho AGS, Sulzbacher MA, Tkalčec Z, Valenzuela R, Verbeken A, Vizzini A, Wartchow F, Wei TZ, Weiß M, Zhao CL, Kirk PM. Notes, outline and divergence times of Basidiomycota. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00435-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
AbstractThe Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in species numbers to the Ascomycota. The present work provides an overview of all validly published, currently used basidiomycete genera to date in a single document. An outline of all genera of Basidiomycota is provided, which includes 1928 currently used genera names, with 1263 synonyms, which are distributed in 241 families, 68 orders, 18 classes and four subphyla. We provide brief notes for each accepted genus including information on classification, number of accepted species, type species, life mode, habitat, distribution, and sequence information. Furthermore, three phylogenetic analyses with combined LSU, SSU, 5.8s, rpb1, rpb2, and ef1 datasets for the subphyla Agaricomycotina, Pucciniomycotina and Ustilaginomycotina are conducted, respectively. Divergence time estimates are provided to the family level with 632 species from 62 orders, 168 families and 605 genera. Our study indicates that the divergence times of the subphyla in Basidiomycota are 406–430 Mya, classes are 211–383 Mya, and orders are 99–323 Mya, which are largely consistent with previous studies. In this study, all phylogenetically supported families were dated, with the families of Agaricomycotina diverging from 27–178 Mya, Pucciniomycotina from 85–222 Mya, and Ustilaginomycotina from 79–177 Mya. Divergence times as additional criterion in ranking provide additional evidence to resolve taxonomic problems in the Basidiomycota taxonomic system, and also provide a better understanding of their phylogeny and evolution.
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Jabeen S, Kiran M, Khan J, Ahmad I, Ahmad H, Sher H, Khalid AN. Amanitaahmadii, a new species of Amanita subgenus Amanitina section Validae from Pakistan. MycoKeys 2019; 56:81-99. [PMID: 31388329 PMCID: PMC6667395 DOI: 10.3897/mycokeys.56.31819] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2018] [Accepted: 12/26/2018] [Indexed: 01/12/2023] Open
Abstract
A new species from coniferous forests in Pakistan, Amanitaahmadii, is described on the basis of morpho-anatomy and molecular data set analyses. This species is characterized by its medium-sized to large basidiomata, grayish brown to brown pileal surface and rimose pileus margin with gray to dark brown verrucose veil remnants, a cream stipe with bulbous base having grayish brown or brown longitudinal striations above the annulus, a scaly surface towards the base, globose to broadly ellipsoid and amyloid basidiospores, and the absence of clamped septa in all tissues. Molecular phylogenetic analyses based on ITS and LSU sequences confirmed its identity as a new taxon nested within subgen. Amanitinasect.Validae.
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Affiliation(s)
- Sana Jabeen
- Department of Botany, Division of Science and Technology, University of Education, Lahore, Punjab, Pakistan University of Education Lahore Pakistan.,Department of Botany, University of the Punjab, Quaid-e-Azam Campus-54590, Lahore, Punjab, Pakistan University of the Punjab Lahore Pakistan
| | - Munazza Kiran
- Department of Botany, University of the Punjab, Quaid-e-Azam Campus-54590, Lahore, Punjab, Pakistan University of the Punjab Lahore Pakistan
| | - Junaid Khan
- Center for Plant Sciences and Biodiversity, University of Swat, Swat, Khyber Pakhtunkhwa, Pakistan University of Swat Swat Pakistan
| | - Ishtiaq Ahmad
- Department of Botany, Division of Science and Technology, University of Education, Lahore, Punjab, Pakistan University of Education Lahore Pakistan.,Centre of Plant Biodiversity and Conservation, University of Peshawar, Peshawar, Khyber Pakhtunkhwa, Pakistan Islamia College University Peshawar Pakistan.,Islamia College University, Peshawar, Khyber Pakhtunkhwa, Pakistan University of Peshawar Peshawar Pakistan
| | - Habib Ahmad
- Islamia College University, Peshawar, Khyber Pakhtunkhwa, Pakistan University of Peshawar Peshawar Pakistan
| | - Hassan Sher
- Center for Plant Sciences and Biodiversity, University of Swat, Swat, Khyber Pakhtunkhwa, Pakistan University of Swat Swat Pakistan
| | - Abdul Nasir Khalid
- Department of Botany, University of the Punjab, Quaid-e-Azam Campus-54590, Lahore, Punjab, Pakistan University of the Punjab Lahore Pakistan
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Ectomycorrhizal Fungi in South America: Their Diversity in Past, Present and Future Research. Fungal Biol 2019. [DOI: 10.1007/978-3-030-15228-4_4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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7
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Overview of the Mycorrhizal Fungi in South America. Fungal Biol 2019. [DOI: 10.1007/978-3-030-15228-4_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Peña-Venegas CP, Vasco-Palacios AM. Endo- and Ectomycorrhizas in Tropical Ecosystems of Colombia. Fungal Biol 2019. [DOI: 10.1007/978-3-030-15228-4_6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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Magnago AC, Neves MA, da Silveira RMB. Fistulinella ruschii, sp. nov., and a new record of Fistulinella campinaranae var. scrobiculata for the Atlantic Forest, Brazil. Mycologia 2018. [PMID: 29528277 DOI: 10.1080/00275514.2018.1431503] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
Fistulinella is a small genus of boletoid fungi in the subfamily Austroboletoideae in the order Boletales. In this paper, F. ruschii from the Atlantic Forest is proposed as new to science and F. campinaranae var. scrobiculata, known from the Brazilian Amazon forest, is recorded for the first time in the Atlantic Forest. Macro- and microscopic descriptions, molecular data (nuc rDNA ITS1-5.8S-ITS2 and nuc 28S rDNA), photographs of the basidiomata, and scanning electron microscopy images of basidiospores are provided for both species. Based on sampling of six taxa, New World Fistulinella is found to be a strongly supported monophyletic group, but the genus at large is nonmonophyletic.
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Affiliation(s)
- Altielys Casale Magnago
- a Departamento de Botânica, Instituto de Biociências , Universidade Federal do Rio Grande do Sul , Campus do Vale 91509-900 , Porto Alegre , RS , Brazil
| | - Maria Alice Neves
- b Departamento de Botânica, Centro de Ciências Biológicas , Universidade Federal de Santa Catarina , Campus Reitor João David Ferreira Lima 88040-900 , Florianópolis , SC , Brazil
| | - Rosa Mara Borges da Silveira
- a Departamento de Botânica, Instituto de Biociências , Universidade Federal do Rio Grande do Sul , Campus do Vale 91509-900 , Porto Alegre , RS , Brazil
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Vasco-Palacios AM, Hernandez J, Peñuela-Mora MC, Franco-Molano AE, Boekhout T. Ectomycorrhizal fungi diversity in a white sand forest in western Amazonia. FUNGAL ECOL 2018. [DOI: 10.1016/j.funeco.2017.10.003] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Roy M, Vasco-Palacios A, Geml J, Buyck B, Delgat L, Giachini A, Grebenc T, Harrower E, Kuhar F, Magnago A, Rinaldi AC, Schimann H, Selosse MA, Sulzbacher MA, Wartchow F, Neves MA. The (re)discovery of ectomycorrhizal symbioses in Neotropical ecosystems sketched in Florianópolis. THE NEW PHYTOLOGIST 2017; 214:920-923. [PMID: 28397362 DOI: 10.1111/nph.14531] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Affiliation(s)
- Mélanie Roy
- Laboratoire Evolution et Diversité Biologique, Université Paul Sabatier - CNRS, UMR5174 UPS CNRS ENFA IRD, 118 route de Narbonne, 31062, Toulouse cedex, France
| | - Aida Vasco-Palacios
- Fundación Biodiversa Colombia, Bogotá, Colombia
- TEHO University of Antioquia, Medellín, 111311, Colombia
| | - József Geml
- Naturalis Biodiversity Center, PO Box 9517, 2300 RA, Leiden, the Netherlands
| | - Bart Buyck
- Muséum National d'Histoire Naturelle, Département Systématique et Evolution, CP 39, ISYEB, UMR 7205 CNRS MNHN UPMC EPHE, 12 Rue Buffon, F-75005, Paris, France
| | - Lynn Delgat
- Department of Biology, Ghent University, K.L. Ledeganckstraat 35, L10, 9000, Gent, Belgium
| | - Admir Giachini
- Universidade Federal de Santa Catarina, Florianopolis, Santa Catarina, 88040-900, Brazil
| | - Tine Grebenc
- Slovenian Forestry Institute, Večna pot 2, 1000, Ljubljana, Slovenia
| | - Emma Harrower
- University of Tennessee, 569 Dabney Hall, Knoxville, TN, 37996, USA
| | - Francisco Kuhar
- Centro de Investigación y Extensión Forestal Andino Patagónico - CONICET, Esquel, 9200, Argentina
| | - Altielys Magnago
- Universidade Federal do Rio Grande do Sul, Porto Alegre, RS, 90040-060, Brazil
| | - Andrea C Rinaldi
- Department of Biomedical Sciences, University of Cagliari, Cittadella Universitaria, I-09042, Monserrato (CA), Italy
| | - Heidy Schimann
- INRA UMR Ecology of Guiana Forests (AgroParisTech, CNRS, CIRAD, Université des Antilles, Université de la Guyane), F-97310, Kourou, Guyane, France
| | - Marc-André Selosse
- Muséum National d'Histoire Naturelle, Département Systématique et Evolution, CP 39, ISYEB, UMR 7205 CNRS MNHN UPMC EPHE, 12 Rue Buffon, F-75005, Paris, France
| | - Marcelo Aloisio Sulzbacher
- Departamento de Solos, Universidade Federal de Santa Maria, Santa Maria, Rio Grande do Sul, 97105-900, Brazil
| | - Felipe Wartchow
- Departamento de Sistemática e Ecologia/CCEN, Laboratório de Morfo-Taxonomia Fúngica, Universidade Federal da Paraíba, 58051-900, João Pessoa, Paraíba, Brazil
| | - Maria-Alice Neves
- Universidade Federal de Santa Catarina, Florianopolis, Santa Catarina, 88040-900, Brazil
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Grupe AC, Vasco-Palacios AM, Smith ME, Boekhout T, Henkel TW. Sarcodonin the Neotropics II: four new species from Colombia and a key to the regional species. Mycologia 2017; 108:791-805. [DOI: 10.3852/15-254] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2015] [Accepted: 02/17/2016] [Indexed: 11/10/2022]
Affiliation(s)
- Arthur C. Grupe
- Department of Biological Sciences, Humboldt State University, Arcata, California 95521
| | - Aída Marcela Vasco-Palacios
- Laboratorio de Taxonomía y Ecología de Hongos, Instituto de Biología, Universidad de Antioquia, Medellín, Colombia
| | - Matthew E. Smith
- Department of Plant Pathology, University of Florida, Gainesville, Florida 32611
| | - Teun Boekhout
- Fungal Biodiversity Centre, CBS-KNAW, Utrecht, the Netherlands
| | - Terry W. Henkel
- Department of Biological Sciences, Humboldt State University, Arcata, California 95521
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Yilmaz N, López-Quintero CA, Vasco-Palacios AM, Frisvad JC, Theelen B, Boekhout T, Samson RA, Houbraken J. Four novel Talaromyces species isolated from leaf litter from Colombian Amazon rain forests. Mycol Prog 2016. [DOI: 10.1007/s11557-016-1227-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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