1
|
Bilański P, Jankowiak R, Solheim H, Fortuna P, Chyrzyński Ł, Warzecha P, Taerum SJ. Soil-borne Ophiostomatales species (Sordariomycetes, Ascomycota) in beech, oak, pine, and spruce stands in Poland with descriptions of Sporothrixroztoczensis sp. nov., S.silvicola sp. nov., and S.tumida sp. nov. MycoKeys 2023; 97:41-69. [PMID: 37251288 PMCID: PMC10210257 DOI: 10.3897/mycokeys.97.97416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Accepted: 04/19/2023] [Indexed: 05/31/2023] Open
Abstract
Ophiostomatales (Ascomycota) contains many species, most of which are associated with bark beetles. Some members of this order are plant or animal pathogens, while others colonize soil, different plant tissues, or even carpophores of some Basidiomycota. However, little is known about soil-inhabiting Ophiostomatales fungi. A survey of these fungi associated with soil under beech, oak, pine, and spruce stands in Poland yielded 623 isolates, representing 10 species: Heinzbutiniagrandicarpa, Leptographiumprocerum, L.radiaticola, Ophiostomapiliferum, O.quercus, Sporothrixbrunneoviolacea, S.dentifunda, S.eucastaneae, and two newly described taxa, namely Sporothrixroztoczensissp. nov. and S.silvicolasp. nov. In addition, isolates collected from fallen shoots of Pinussylvestris that were pruned by Tomicus sp. are described as Sporothrixtumidasp. nov. The new taxa were morphologically characterized and phylogenetically analyzed based on multi-loci sequence data (ITS, β-tubulin, calmodulin, and translation elongation factor 1-α genes). The Ophiostomatales species were especially abundant in soil under pine and oak stands. Leptographiumprocerum, S.silvicola, and S.roztoczensis were the most frequently isolated species from soil under pine stands, while S.brunneoviolacea was the most abundant in soil under oak stands. The results highlight that forest soil in Poland has a wide diversity of Ophiostomatales taxa, but further studies are required to uncover the molecular diversity and phylogenetic relationships of these fungi, as well as their roles in soil fungal communities.
Collapse
Affiliation(s)
- Piotr Bilański
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Robert Jankowiak
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Halvor Solheim
- Norwegian Institute of Bioeconomy Research, P.O. Box 115, 1431, Ås, NorwayNorwegian Institute of Bioeconomy ResearchÅsNorway
| | - Paweł Fortuna
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Łukasz Chyrzyński
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Paulina Warzecha
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, PolandUniversity of Agriculture in KrakowKrakowPoland
| | - Stephen Joshua Taerum
- The Connecticut Agricultural Experiment Station, Department of Plant Pathology and Ecology, Jenkins-Waggoner Laboratory, 123 Huntington Street P.O. Box 1106, New Haven, CT 06504-1106, USAThe Connecticut Agricultural Experiment Station, Department of Plant Pathology and Ecology, Jenkins-Waggoner LaboratoryNew HavenUnited States of America
| |
Collapse
|
2
|
Wang H, Liu C, Yue F, Yan DH, Lu Q. Identification of ophiostomatalean fungi associated with Tomicus pilifer infesting Pinus koraiensis in Northeastern China. Front Microbiol 2022; 13:919302. [PMID: 36118248 PMCID: PMC9479222 DOI: 10.3389/fmicb.2022.919302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 07/04/2022] [Indexed: 11/13/2022] Open
Abstract
Ophiostomatalean fungi usually facilitate bark beetles to infest tree hosts and seriously endanger the health of coniferous forests. Tomicus pilifer Spessivtsev is a common endemic bark beetle in Asia and primarily threatens Pinus koraiensis. Tomicus species have similar morphology; however, they can be differentiated by their genetic characteristics through phylogenetic analyses. To date, the 28S rDNA sequence of T. pilifer and the diversity of ophiostomatalean fungi associated with T. pilifer have not been reported. In this study, we aimed to clarify the taxonomic status of T. pilifer and identify ophiostomatalean fungi associated with T. pilifer infesting P. koraiensis in northeastern China. In total, 315 ophiostomatalean fungal strains were isolated from 62 adults of T. pilifer and 220 tissue samples from T. pilifer galleries in Jilin Province. Thirty-five representative strains were further identified by comparing their morphological and physiological characteristics and conducting the phylogenetic analysis of ITS, ITS2-LSU, TUB2, and TEF1-α. We identified nine species of ophiostomatalean fungi belonging to four genera, which included six novel species (Ceratocystiopsis changbaiensis sp. nov., Leptographium linjiangense sp. nov., Leptographium qieshaoense sp. nov., Ophiostoma piliferi sp. nov., Ophiostoma tonghuaense sp. nov., and Ophiostoma yaluense sp. nov.), two previously described species (Graphilbum interstitiale and Ophiostoma fuscum), and one undefined specie (Ceratocystiopsis sp. 1). To the best of our knowledge, this is the first report of G. interstitiale and O. fuscum in China and the fungal diversity of ophiostomatalean in T. pilifer. The dominant species were O. piliferi and L. qieshaoense, representing 39.37% and 35.87% of the isolates, respectively. The results of this study provide valuable information on the symbiotic relationship between bark beetles and ophiostomatalean fungi.
Collapse
Affiliation(s)
- Huimin Wang
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
| | - Caixia Liu
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
| | - Fangzheng Yue
- Biological Disaster Control and Prevention Center, National Forestry and Grassland Administration, Shenyang, China
| | - Dong-Hui Yan
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
| | - Quan Lu
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing, China
- *Correspondence: Quan Lu
| |
Collapse
|
3
|
Zheng G, You M, Li X, Zhou Q, Wang Z, Wang H, Lu Q. Diversity of fungi associated with Monochamusalternatus larval habitats in Bursaphelenchusxylophilus-infected Pinusmassoniana and identification of two new ophiostomatalean species (Ascomycota, Ophiostomatales). MycoKeys 2022; 92:1-25. [PMID: 36761318 PMCID: PMC9849073 DOI: 10.3897/mycokeys.92.80682] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2022] [Accepted: 06/01/2022] [Indexed: 11/12/2022] Open
Abstract
Bursaphelenchusxylophilus, a pathogenic pine wood nematode (PWN), is responsible for pine wilt disease (PWD), which has caused significant economic and ecological damage worldwide, particularly in East Asia. Multiple biological factors, such as the beetle vector Monochamus, symbiotic bacteria and associated fungi, are involved in the disease infection cycle. This study isolated and identified the fungal communities of Monochamusalternatus larval galleries and pupal chambers from different instars through field investigation, morphological observation and multi-locus DNA sequence analyses in Zhejiang Province, China. A total of 255 and 454 fungal strains were isolated from M.alternatus galleries and pupal chambers infected with PWN, from the 2nd-3rd and 4th-5th instar larvae, respectively. A total of 18 species of fungi were identified, 14 species were isolated from the 2nd-3rd instar larval galleries and six species from the galleries and pupal chambers of the 4th-5th instar larvae. Amongst them were six species belonging to four genera of ophiostomatalean fungi, including two novel species, Graphilbumxianjuensis sp. nov. and Ophiostomataizhouense sp. nov. and four known species, Ceratocystiopsisweihaiensis, Ophiostomaips, Sporothrixzhejiangensis and S.macroconidia. The findings revealed that the fungal diversity and abundance of the 2nd-3rd instar larvae differed markedly from those of the 4th-5th instar larvae. This difference could be the result of fungal succession. This study provides a thorough understanding of the fungi associated with PWD and lays the groundwork for future research.
Collapse
Affiliation(s)
- Guiheng Zheng
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, ChinaEcology and Nature Conservation Institute, Chinese Academy of ForestryBeijingChina
| | - Minqi You
- Agriculture and Rural Affairs Bureau of Huangyan District, Taizhou City 318020, ChinaAgriculture and Rural Affairs Bureau of Huangyan DistrictZhejiangChina
| | - Xuening Li
- Research Institute of Desertification, Chinese Academy of Forestry, Beijing 100091, ChinaResearch Institute of Desertification, Chinese Academy of ForestryBeijingChina
| | - Qinzheng Zhou
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, ChinaEcology and Nature Conservation Institute, Chinese Academy of ForestryBeijingChina
| | - Zheng Wang
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, ChinaEcology and Nature Conservation Institute, Chinese Academy of ForestryBeijingChina
| | - Huimin Wang
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, ChinaEcology and Nature Conservation Institute, Chinese Academy of ForestryBeijingChina
| | - Quan Lu
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, ChinaEcology and Nature Conservation Institute, Chinese Academy of ForestryBeijingChina
| |
Collapse
|
4
|
Kovač M, Rigling D, Pernek M. Ophiostomatales Associated with Mediterranean Pine Engraver, Orthotomicus erosus (Coleoptera, Curculionidae) in Dalmatia, Croatia. J Fungi (Basel) 2022; 8:jof8080788. [PMID: 36012778 PMCID: PMC9410398 DOI: 10.3390/jof8080788] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Revised: 07/18/2022] [Accepted: 07/26/2022] [Indexed: 02/04/2023] Open
Abstract
Mediterranean pine engraver, Orthotomicus erosus was never considered as a significant pest in Croatia and did not appear in high population densities until 2017, when it reached outbreak level in Aleppo pine stands. The beetle was first detected in Marjan Forest Park, Split, and was soon recorded in other parts of the Dalmatian coast. Soon after the outbreak occurred, we observed that all of the attacked trees exhibit severe blue staining in the sapwood which indicated fungal infection caused by the Ophiostomatales group of fungi. This raised the need to investigate their relationship with O. erosus and the pine decline, and the main aim of this study was to isolate and identify them. Isolates were obtained from adult O. erosus beetles, their galleries, and blue-stained sapwood, and identified according to the morphological characteristics and DNA sequencing. A total of six Ophiostomatales (Ophiostoma ips, O. piceae, Graphilbum cf. rectangulosporium, O. floccosum, Sporothrix pseudoabietina and Ceratocystiopsis cf. minuta) were identified in the study. This is the first record of Ophiostomatales as organisms associated with the pest O. erosus and pine species in Croatia.
Collapse
Affiliation(s)
- Marta Kovač
- Croatian Forest Research Institute, Division for Forest Protection and Game Management, Cvjetno Naselje 41, 10450 Jastrebarsko, Croatia;
- Correspondence:
| | - Daniel Rigling
- Swiss Federal Research Institute WSL, 8903 Birmensdorf, Switzerland;
| | - Milan Pernek
- Croatian Forest Research Institute, Division for Forest Protection and Game Management, Cvjetno Naselje 41, 10450 Jastrebarsko, Croatia;
| |
Collapse
|
5
|
Diversity of Ophiostomatoid Fungi Associated with Dendroctonus armandi Infesting Pinus armandii in Western China. J Fungi (Basel) 2022; 8:jof8030214. [PMID: 35330216 PMCID: PMC8951329 DOI: 10.3390/jof8030214] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2022] [Revised: 02/17/2022] [Accepted: 02/19/2022] [Indexed: 11/16/2022] Open
Abstract
Pinus armandii (P. armandii) is extensively abundant in western China and, as a pioneer tree, and prominently influences local ecology. However, pine forests in this region have been significantly damaged by Dendroctonus armandi (D. armandi) infestations, in close association with ophiostomatoid fungi. This study aimed to identify the diversity of ophiostomatoid fungi associated with D. armandi infesting P. armandii in western China. A total of 695 ophiostomatoid fungal strains were isolated from 1040 tissue pieces from D. armandi galleries and 89 adult beetles at four sites. In this study, based on multiloci DNA sequence data, as well as morphological and physiological characteristics, seven species belonging to five genera were identified including three known species, Esteyea vermicola, Graphium pseudormiticum and L. wushanense, two novel taxa, Graphilbum parakesiyea and Ophiostoma shennongense, and an unidentified Ophiostoma sp. 1. A neotype of Leptographium qinlingense. Ophiostoma shennongense was the dominant taxon (78.99%) in the ophiostomatoid community. This study provides a valuable scientific theoretical basis for the occurrence and management of D. armandi in the future.
Collapse
|
6
|
Pires D, Vicente CSL, Inácio ML, Mota M. The Potential of Esteya spp. for the Biocontrol of the Pinewood Nematode, Bursaphelenchus xylophilus. Microorganisms 2022; 10:microorganisms10010168. [PMID: 35056617 PMCID: PMC8781088 DOI: 10.3390/microorganisms10010168] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 01/07/2022] [Accepted: 01/12/2022] [Indexed: 01/21/2023] Open
Abstract
The pinewood nematode (PWN), Bursaphelenchus xylophilus, is the causal agent of pine wilt disease (PWD) and a quarantine organism in many countries. Managing PWD involves strict regulations and heavy contingency plans, and present climate change scenarios predict a spread of the disease. The urgent need for sustainable management strategies has led to an increasing interest in promising biocontrol agents capable of suppressing the PWN, like endoparasitic nematophagous fungi of the Esteya genus. Here, we review different aspects of the biology and ecology of these nematophagous fungi and provide future prospects.
Collapse
Affiliation(s)
- David Pires
- Instituto Nacional de Investigação Agrária e Veterinária (INIAV, I.P.), 2780-159 Oeiras, Portugal;
- Mediterranean Institute for Agriculture, Environment and Development (MED), University of Évora, Pólo da Mitra, Apartado 94, 7006-554 Evora, Portugal;
| | - Cláudia S. L. Vicente
- Mediterranean Institute for Agriculture, Environment and Development (MED), University of Évora, Pólo da Mitra, Apartado 94, 7006-554 Evora, Portugal;
- Correspondence: (C.S.L.V.); (M.L.I.)
| | - Maria L. Inácio
- Instituto Nacional de Investigação Agrária e Veterinária (INIAV, I.P.), 2780-159 Oeiras, Portugal;
- GREEN-IT Bioresources for Sustainability, ITQB NOVA, Av. da República, 2780-157 Oeiras, Portugal
- Correspondence: (C.S.L.V.); (M.L.I.)
| | - Manuel Mota
- Mediterranean Institute for Agriculture, Environment and Development (MED), University of Évora, Pólo da Mitra, Apartado 94, 7006-554 Evora, Portugal;
| |
Collapse
|
7
|
Morphological and Phylogenetic Analyses Reveal a New Species of Ceratocystiopsis (Ophiostomataceae, Ophiostomatales) Associated with Ips subelongatus in Inner Mongolia (China) with Weak Host Pathogenicity. FORESTS 2021. [DOI: 10.3390/f12121795] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Ophiostomatoid fungi are known for their associations with bark beetles, and some species are important sources of tree diseases. Ceratocystiopsis is a genus of the ophiostomatoid fungi in order Ophiostomatales. The shortage of DNA barcodes for many species in this genus has resulted in the presence of many unnamed cryptic species. In this study, Ceratocystiopsis subelongati sp. nov. associated with Ips subelongatus infesting Pinus sylvestris var. mongolica in Inner Mongolia, China, was identified and described based on phylogenetic inference of multi-gene DNA sequences and morphological characteristics. The species is characterized by a hyalorhinocladiella- to sporothrix-like asexual state and an optimal growth temperature of 30 °C. Artificial inoculation tests in the field showed that it is mildly pathogenic to five-year-old larch trees, the main host of I. subelongatus. It is also the first described Ceratocystiopsis species associated with I. subelongatus in China. This discovery should provide new avenues for studying the symbiosis between bark beetles and ophiostomatoid fungi.
Collapse
|
8
|
Wang Z, Zhou Q, Zheng G, Fang J, Han F, Zhang X, Lu Q. Abundance and Diversity of Ophiostomatoid Fungi Associated With the Great Spruce Bark Beetle ( Dendroctonus micans) in the Northeastern Qinghai-Tibet Plateau. Front Microbiol 2021; 12:721395. [PMID: 34733243 PMCID: PMC8558629 DOI: 10.3389/fmicb.2021.721395] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Accepted: 09/22/2021] [Indexed: 11/25/2022] Open
Abstract
The role of several virulent tree pathogens in host death has been overlooked because of the aggressiveness of their associated bark beetles. The great spruce bark beetle (Dendroctonus micans) is a widely distributed beetle that infests coniferous plants in Eurasia; however, its associated fungi have been poorly studied. Therefore, in this study, we elucidated the diversity of ophiostomatoid fungi associated with D. micans in the northeastern Qinghai-Tibet Plateau through field investigation, laboratory isolation, and culture analyses. A total of 220 strains of ophiostomatoid fungi were isolated from adults and tunnel galleries of D. micans infesting Picea crassifolia. We identified that the isolated strains belonged to eight ophiostomatoid species, including five new species (Ophiostoma huangnanense sp. nov., Ophiostoma maixiuense sp. nov., Ophiostoma sanum sp. nov., Leptographium sanjiangyuanense sp. nov., and Leptographium zekuense sp. nov.), one undefined species (Ophiostoma sp. 1), and two known species (Ophiostoma bicolor and Endoconidiophora laricicola), using phylogenetic analysis of multigene DNA sequences and morphological characteristics. This is the first time that E. laricicola, a pioneer invader and virulent pathogen, has been reported in China. We found that E. laricicola was the dominant species, accounting for 40.91% of the total number of ophiostomatoid communities. This study enriched the knowledge of the fungal associates of D. micans and elucidated that it carried the virulent pathogen E. laricicola at a surprisingly high frequency. Our findings show increased species association between D. micans and ophiostomatoid fungi and provide a basis for understanding the occurrence of forest diseases and pests.
Collapse
Affiliation(s)
- Zheng Wang
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, China
| | - Qinzheng Zhou
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, China
| | - Guiheng Zheng
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, China
| | - Jiaxing Fang
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, China
| | | | - Xingyao Zhang
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, China
| | - Quan Lu
- Key Laboratory of Forest Protection of National Forestry and Grassland Administration, Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, China
| |
Collapse
|
9
|
Trollip C, Carnegie AJ, Dinh Q, Kaur J, Smith D, Mann R, Rodoni B, Edwards J. Ophiostomatoid fungi associated with pine bark beetles and infested pines in south-eastern Australia, including Graphilbum ipis-grandicollis sp. nov. IMA Fungus 2021; 12:24. [PMID: 34465398 PMCID: PMC8408996 DOI: 10.1186/s43008-021-00076-w] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2020] [Accepted: 07/31/2021] [Indexed: 11/28/2022] Open
Abstract
The ophiostomatoid fungi are an assemblage of ascomycetes which are arguably best-known for their associations with bark and ambrosia beetles (Curculonidae) and blue stain (sap stain) of many economically important tree species. These fungi are considered a significant threat to coniferous forests, which has resulted in numerous studies characterising the diversity of bark beetles and their ophiostomatoid associates globally. The diversity of ophiostomatoid fungi present in Australian pine plantations, however, remains largely undetermined. The aims of this study were therefore to reconsider the diversity of ophiostomatoid fungi associated with Pinus in Australia, and to establish the baseline of expected taxa found within these plantation ecosystems. To achieve this, we reviewed Australian plant pathogen reference collections, and analysed samples collected during forest health surveillance programs from the major pine growing regions in south-eastern Australia. In total, 135 ophiostomatoid isolates (15 from reference collections and 120 collected during the current study) were assessed using morphological identification and ITS screening which putatively distinguished 15 taxonomic groups. Whole genome sequencing (WGS) of representative isolates from each taxon was performed to obtain high-quality sequence data for multi-locus phylogenetic analysis. Our results revealed a greater than expected diversity, expanding the status of ophiostomatoid fungi associated with Pinus in Australia to include 14 species from six genera in the Ophiostomatales and a single species residing in the Microascales. While most of these were already known to science, our study includes seven first records for Australia and the description of one new species, Graphilbum ipis-grandicollis sp. nov.. This study also provides an early example of whole genome sequencing (WGS) approaches replacing traditional PCR-based methods for taxonomic surveys. This not only allowed for robust multi-locus sequence extraction during taxonomic assessment, but also permitted the rapid establishment of a curated genomic database for ophiostomatoid fungi which will continue to aid in the development of improved diagnostic resources and capabilities for Australian biosecurity.
Collapse
Affiliation(s)
- Conrad Trollip
- School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083 Australia
- Department of Jobs, Precincts and Regions, Agriculture Victoria Research, AgriBio Centre, Bundoora, VIC 3083 Australia
| | - Angus J. Carnegie
- Forest Science, NSW Department of Primary Industries – Forestry, Parramatta, NSW 2150 Australia
| | - Quang Dinh
- Department of Jobs, Precincts and Regions, Agriculture Victoria Research, AgriBio Centre, Bundoora, VIC 3083 Australia
| | - Jatinder Kaur
- Department of Jobs, Precincts and Regions, Agriculture Victoria Research, AgriBio Centre, Bundoora, VIC 3083 Australia
| | - David Smith
- Department of Jobs, Precincts and Regions, Biosecurity and Agricultural Services, Agriculture Victoria, Cranbourne, VIC 3977 Australia
| | - Ross Mann
- Department of Jobs, Precincts and Regions, Agriculture Victoria Research, AgriBio Centre, Bundoora, VIC 3083 Australia
| | - Brendan Rodoni
- School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083 Australia
- Department of Jobs, Precincts and Regions, Agriculture Victoria Research, AgriBio Centre, Bundoora, VIC 3083 Australia
| | - Jacqueline Edwards
- School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083 Australia
- Department of Jobs, Precincts and Regions, Agriculture Victoria Research, AgriBio Centre, Bundoora, VIC 3083 Australia
| |
Collapse
|
10
|
Ostafińska A, Jankowiak R, Bilański P, Solheim H, Wingfield MJ. Six new species of Sporothrix from hardwood trees in Poland. MycoKeys 2021; 82:1-32. [PMID: 34393590 PMCID: PMC8357686 DOI: 10.3897/mycokeys.82.66603] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2021] [Accepted: 07/09/2021] [Indexed: 11/12/2022] Open
Abstract
Sporothrix (Sordariales, Ascomycota) is a well-supported monophyletic lineage within the Ophiostomatales, species of which occur in a diverse range of habitats including on forest trees, in the soil, associated with bark beetles and mites as well as on the fruiting bodies of some Basidiomycota. Several species have also been reported as important human and animal pathogens. During surveys of insect- and wound-associated Ophiostomatales from hardwood trees in Poland, many isolates with affinity to Sporothrix were recovered. In the present study, six undescribed Sporothrix spp. collected during these surveys are characterized based on their morphological characteristics and multi-locus phylogenenetic inference. They are described as Sporothrixcavum, Sporothrixcracoviensis, S.cryptarchum, S.fraxini, S.resoviensis, and S.undulata. Two of the Sporothrix spp. reside in the S.gossypina-complex, while one forms part of the S.stenoceras-complex. One Sporothrix sp. is a member of lineage F, and two other species grouped outside any of the currently defined species complexes. All the newly described species were recovered from hardwood habitats in association with sub-cortical insects, wounds or woodpecker cavities. These species were morphologically similar, with predominantly asexual states having hyaline or lightly pigmented conidia, which produce holoblastically on denticulate conidiogenous cells. Five of the new taxa produce ascomata with necks terminating in long ostiolar hyphae and allantoid ascospores without sheaths. The results suggest that Sporothrix species are common members of the Ophiostomatales in hardwood ecosystems of Poland.
Collapse
Affiliation(s)
- Agnieszka Ostafińska
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, Poland University of Agriculture Krakow Poland.,State Forets, Forest District Dynów, ul. Jaklów 2, 36-065 Dynów, Poland State Forets, Forest District Dynów Dynów Poland
| | - Robert Jankowiak
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, Poland University of Agriculture Krakow Poland
| | - Piotr Bilański
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, Poland University of Agriculture Krakow Poland
| | - Halvor Solheim
- Norwegian Institute of Bioeconomy Research, P.O. Box 115, 1431 Ås, Norway Norwegian Institute of Bioeconomy Research Ås Norway
| | - Michael J Wingfield
- Department of Biochemistry, Microbiology and Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa University of Pretoria Pretoria South Africa
| |
Collapse
|
11
|
Li Y, Yu H, Araújo JPM, Zhang X, Ji Y, Hulcr J. Esteya floridanum sp. nov.: An Ophiostomatalean Nematophagous Fungus and Its Potential to Control the Pine Wood Nematode. PHYTOPATHOLOGY 2021; 111:304-311. [PMID: 32734814 DOI: 10.1094/phyto-06-20-0229-r] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The nematophagous fungal genus Esteya is reported as a natural enemy of the pine wood nematode Bursaphelenchus xylophilus, which causes pine wilt in Asia and Europe. During a survey of fungi associated with ambrosia beetles in Florida, an undescribed Esteya species was found. A phylogenetic analysis based on nuclear large subunit and β-tubulin DNA sequences supported this isolate as a new species, E. floridanum. Morphological and phylogenetic characteristics and a species description are provided here. The fungus was observed to kill the pine wood nematode in vitro. To evaluate the ability of E. floridanum to protect trees against the pine wood nematode in vivo, the effect of prophylactic inoculation was tested on Pinus koraiensis and Larix olgensis in Liaoning, China. The results suggest that the fungus is not a plant pathogen and that it delays wilt and postpones death of two conifer trees. This presents a potential new avenue for research on biocontrol of pine wilt disease and stresses the value of research on pest organisms in their native regions.
Collapse
Affiliation(s)
- You Li
- School of Forest Resources and Conservation, University of Florida, Gainesville, FL 32611, U.S.A
| | - Haiying Yu
- Technology Center, General Station of Forest Pest Control, National Forestry Administration, Shenyang, Liaoning 110034, China
- Shenyang Institute of Technology, Shenyang, Liaoning 113122, China
| | - João P M Araújo
- School of Forest Resources and Conservation, University of Florida, Gainesville, FL 32611, U.S.A
| | - Xinfeng Zhang
- Technology Center, General Station of Forest Pest Control, National Forestry Administration, Shenyang, Liaoning 110034, China
| | - Yingchao Ji
- College of Plant Protection, Shandong Agricultural University, Tai'an 271018, China
| | - Jiri Hulcr
- School of Forest Resources and Conservation, University of Florida, Gainesville, FL 32611, U.S.A
| |
Collapse
|
12
|
Wang Z, Liu Y, Wang T, Decock C, Chu B, Zheng Q, Lu Q, Zhang X. Grosmannia tibetensis, a new ophiostomatoid fungus associated with Orthotomicus sp. (Coleoptera) in Tibetan subalpine forests. MYCOSCIENCE 2020. [DOI: 10.1016/j.myc.2020.05.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
13
|
Pan Y, Lu J, Zhou XD, Yu ZF, Chen P, Wang J, Ye H. Two new species of Leptographium associated with Tomicus spp. infesting Pinus spp. in Southwestern China. Int J Syst Evol Microbiol 2020; 70:4798-4807. [PMID: 32783804 DOI: 10.1099/ijsem.0.004349] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Leptographium panxianense and L. puerense are proposed as new taxa based on sequence data and morphological characters. The phylogenetic analyses based on ITS2-partial LSU rDNA region, β-tubulin and elongation factor 1-α genes showed that L. panxianense and L. puerense formed well-supported clades and were closely related to L. yunnanense, L. wushanense and L. conjunctum, and then nested within the L. lundbergii complex. The two species differ in their conidial size and shape. The conidia of L. panxianense are larger than those of L. puerense while the conidial shape of L. puerense is more ovovoid. The optimal growth temperature of both L. panxianense and L. puerense is at 20 °C, which is different from those of L. yunnanense, L. wushanense and L. conjunctum. Comparison of sequence data and morphological characters confirmed the placement of the two undescribed taxa in the genus of Leptographium.
Collapse
Affiliation(s)
- Yue Pan
- Eco-development Academy, Southwest Forestry University, Kunming, 650224, PR China.,Laboratory of Biological Invasion and Ecosecurity, Yunnan University, Kunming, 650091, PR China
| | - Jun Lu
- Laboratory of Biological Invasion and Ecosecurity, Yunnan University, Kunming, 650091, PR China
| | - Xu-Dong Zhou
- School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, 311300, PR China
| | - Ze-Fen Yu
- Laboratory for Conservation and Utilization of Bio-Resources, Key Laboratory Resources of the Ministry of Education, Yunnan University, Kunming, 650091, PR China
| | - Peng Chen
- Yunnan Academy of Forestry and Glassland, Kunming, 650201, PR China
| | - Juan Wang
- Eco-development Academy, Southwest Forestry University, Kunming, 650224, PR China
| | - Hui Ye
- Laboratory of Biological Invasion and Ecosecurity, Yunnan University, Kunming, 650091, PR China
| |
Collapse
|
14
|
Chang R, Duong TA, Taerum SJ, Wingfield MJ, Zhou X, de Beer ZW. Ophiostomatoid fungi associated with mites phoretic on bark beetles in Qinghai, China. IMA Fungus 2020; 11:15. [PMID: 32775175 PMCID: PMC7391587 DOI: 10.1186/s43008-020-00037-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2020] [Accepted: 06/23/2020] [Indexed: 11/21/2022] Open
Abstract
Bark beetle galleries are complex ecosystems where many microbes and other arthropods co-exist with the beetles. Fungi isolated from these galleries are often referred to as ‘beetle associates’, but the nature of these associations are poorly understood. The possibility that many of these fungi might in fact be mite associates is often overlooked. Several recent studies explored the diversity of fungi from conifer-infesting bark beetles and their galleries in China, but only one study considered phoretic mites and their fungi from conifer-infesting bark beetles in Yunnan, southwestern China. We studied the mites and fungi from galleries of four spruce-infesting bark beetle species in the high altitude forests of Qinghai province, western China. Mites were identified based on morphological characteristics, and fungi based on DNA sequences of four gene regions. In total, 173 mite individuals were collected belonging to 18 species in 11 genera. A total of 135 fungal isolates were obtained from the mites, representing 14 taxa from the Ophiostomatales. The most frequently isolated fungus was Ophiostoma nitidum, which represented 23.5% of the total isolates. More fungal species were found from fewer mites and bark beetle species than from the study in Yunnan. Although we could not elucidate the exact nature of interactions between mites and their fungi, our results re-enforce that these organisms should not be ignored in pest risk assessments of bark beetles, that often focus only on the beetles and their fungi. Three new species are described: Grosmannia zekuensis, O. manchongi, and O. kunlunense spp. nov., and our data revealed that O. typographi, recently described from China, is a synonym of O. ainoae.
Collapse
Affiliation(s)
- Runlei Chang
- Department of Biochemistry, Genetics & Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002 South Africa.,College of Life Sciences, Shandong Normal University, Jinan, 250014 China
| | - Tuan A Duong
- Department of Biochemistry, Genetics & Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002 South Africa
| | - Stephen J Taerum
- Department of Biochemistry, Genetics & Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002 South Africa
| | - Michael J Wingfield
- Department of Biochemistry, Genetics & Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002 South Africa
| | - XuDong Zhou
- Department of Biochemistry, Genetics & Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002 South Africa
| | - Z Wilhelm de Beer
- Department of Biochemistry, Genetics & Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, 0002 South Africa
| |
Collapse
|
15
|
Jankowiak R, Solheim H, Bilański P, Marincowitz S, Wingfield MJ. Seven new species of Graphilbum from conifers in Norway, Poland, and Russia. Mycologia 2020; 112:1240-1262. [DOI: 10.1080/00275514.2020.1778375] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Robert Jankowiak
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, Poland
| | - Halvor Solheim
- Norwegian Institute of Bioeconomy Research, P.O. Box 115, 1431 Ås, Norway
| | - Piotr Bilański
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, Poland
| | - Seonju Marincowitz
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0002, South Africa
| | - Michael J. Wingfield
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0002, South Africa
| |
Collapse
|
16
|
Six DL. Niche construction theory can link bark beetle-fungus symbiosis type and colonization behavior to large scale causal chain-effects. CURRENT OPINION IN INSECT SCIENCE 2020; 39:27-34. [PMID: 32114295 DOI: 10.1016/j.cois.2019.12.005] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Revised: 12/16/2019] [Accepted: 12/21/2019] [Indexed: 06/10/2023]
Abstract
Bark beetles form a variety of symbioses with fungi. Recent studies reveal how the fungi influence beetle nutrition and detoxify tree defenses and provide insight into why these symbioses vary so greatly in their outcomes, not only for host and symbiont, but also for the forest ecosystems within which they exist. Here, I review recent advances in our knowledge of these systems. I then introduce how niche construction theory can provide a framework to use this knowledge to better understand how different symbiosis types result in a gradient of ecosystem effects ranging from massive and durable to those of little ecological consequence.
Collapse
Affiliation(s)
- Diana L Six
- Department of Ecosystem and Conservation Sciences, University of Montana, Missoula, MT 59804, USA.
| |
Collapse
|
17
|
Rodrigues AM, Della Terra PP, Gremião ID, Pereira SA, Orofino-Costa R, de Camargo ZP. The threat of emerging and re-emerging pathogenic Sporothrix species. Mycopathologia 2020; 185:813-842. [PMID: 32052359 DOI: 10.1007/s11046-020-00425-0] [Citation(s) in RCA: 59] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Accepted: 01/09/2020] [Indexed: 01/19/2023]
Abstract
Sporotrichosis is a neglected subcutaneous mycosis of humans and animals acquired by traumatic inoculation of soil and plant material (classical route) contaminated with infectious propagules of the pathogen or being bitten/scratched by infected cats (alternative route). Within a genus composed of 53 species displaying an essentially environmental core, there are only a few members which have considerable impacts on human or animal health. Infections are typically caused by S. brasiliensis, S. schenckii or S. globosa. Rare mammal pathogens include members of the S. pallida and S. stenocereus complexes. To illustrate the tremendous impact of emerging zoonotic sporotrichosis on public health, we discuss the main features of the expanding epidemics driven by S. brasiliensis in cats and humans. The cat entry in the transmission chain of sporotrichosis, causing epizooties (cat-cat) or zoonosis (cat-human), has contributed to the definition of new paradigms in Sporothrix transmission, reaching epidemic levels, making the disease a serious public health problem. Indeed, S. brasiliensis infection in humans and animals is likely to become even more important in the future, with projections of its expansion in biogeographic domains and host range, as well as greater virulence in mammals. Therefore, lessons from a long-standing outbreak in the state of Rio de Janeiro about the source and distribution of the etiological agents among outbreak areas can be used to create better control and prevention plans and increase awareness of sporotrichosis as a serious emerging zoonotic disease.
Collapse
Affiliation(s)
- Anderson Messias Rodrigues
- Laboratory of Emerging Fungal Pathogens, Cell Biology Division, Department of Microbiology, Immunology and Parasitology, Paulista School of Medicine, Federal University of São Paulo, São Paulo, 04023-062, Brazil.
| | - Paula Portella Della Terra
- Laboratory of Emerging Fungal Pathogens, Cell Biology Division, Department of Microbiology, Immunology and Parasitology, Paulista School of Medicine, Federal University of São Paulo, São Paulo, 04023-062, Brazil
| | - Isabella Dib Gremião
- Laboratory of Clinical Research on Dermatozoonoses in Domestic Animals, Evandro Chagas National Institute of Infectious Diseases, Oswaldo Cruz Foundation (Fiocruz), Rio de Janeiro, RJ, Brazil
| | - Sandro Antonio Pereira
- Laboratory of Clinical Research on Dermatozoonoses in Domestic Animals, Evandro Chagas National Institute of Infectious Diseases, Oswaldo Cruz Foundation (Fiocruz), Rio de Janeiro, RJ, Brazil
| | - Rosane Orofino-Costa
- Dermatology Department, Faculdade de Ciências Médicas, Universidade do Estado do Rio de Janeiro (FCM-UERJ), Rio de Janeiro, RJ, Brazil
| | - Zoilo Pires de Camargo
- Laboratory of Emerging Fungal Pathogens, Cell Biology Division, Department of Microbiology, Immunology and Parasitology, Paulista School of Medicine, Federal University of São Paulo, São Paulo, 04023-062, Brazil
| |
Collapse
|
18
|
Wang Z, Liu Y, Wang H, Meng X, Liu X, Decock C, Zhang X, Lu Q. Ophiostomatoid fungi associated with Ips subelongatus, including eight new species from northeastern China. IMA Fungus 2020; 11:3. [PMID: 32617255 PMCID: PMC7325231 DOI: 10.1186/s43008-019-0025-3] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2019] [Accepted: 12/20/2019] [Indexed: 11/30/2022] Open
Abstract
Ips subelongatus is a major pest that infects larch plantations over large areas of northern and northeastern China. Ips species are closely associated with ophiostomatoid fungi that are morphologically well-adapted for dispersal by beetles. These associations result in important threat for coniferous forests worldwide. The aim of this study was to characterize the ophiostomatoid communities associated with I. subelongatus infesting Larix species and sympatric Pinus sylvestris var. mongolica in northeastern China forests. Morphological and multilocus phylogenetic approaches (based on six markers: ITS, LSU, 60S, β-tubulin, EF-1α, and CAL gene regions) allowed identifying 14 species of four genera (Ceratocystiopsis, Endoconidiophora, Leptographium and Ophiostoma). Eight species are showed to be new to science. Most strains resided in two Ophiostoma species complexes, viz. the O. clavatum and the O. ips complexes, all together accounting for 76.8% of all isolates. Ophiostoma hongxingense sp. nov., O. peniculi sp. nov., and O. subelongati sp. nov. (O. clavatum complex) and O. pseudobicolor sp. nov. (O. ips complex) were the four dominant species. The ophiostomatoid communities associated with larch bark beetles, I. cembrae and I. subelongatus, in Europe and Asia, China and Japan, also were compared. These comparisons showed distinct, specific assemblage patterns.
Collapse
Affiliation(s)
- Zheng Wang
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, 100091 China
| | - Ya Liu
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, 100091 China
| | - Huimin Wang
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, 100091 China
| | - Xianjing Meng
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, 100091 China
| | - Xuewei Liu
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, 100091 China.,Wuqing Forestry Bureau, Tianjin, 301700 China
| | - Cony Decock
- Mycothèque de l'Université Catholique de Louvain (MUCL), Earth and Life Institute, Microbiology, B-1348 Louvain-la-Neuve, Belgium
| | - Xingyao Zhang
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, 100091 China
| | - Quan Lu
- Key Laboratory of Forest Protection, National Forestry and Grassland Administration; Research Institute of Forest Ecology, Environment and Protection, Chinese Academy of Forestry, Beijing, 100091 China
| |
Collapse
|
19
|
Musvuugwa T, de Beer ZW, Dreyer LL, Duong T, Marincowitz S, Oberlander KC, Roets F. New ophiostomatoid fungi from wounds on storm-damaged trees in Afromontane forests of the Cape Floristic Region. Mycol Prog 2020. [DOI: 10.1007/s11557-019-01545-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
|
20
|
Epibiotic Fungal Communities of Three Tomicus spp. Infesting Pines in Southwestern China. Microorganisms 2019; 8:microorganisms8010015. [PMID: 31861833 PMCID: PMC7023379 DOI: 10.3390/microorganisms8010015] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2019] [Revised: 12/14/2019] [Accepted: 12/16/2019] [Indexed: 01/13/2023] Open
Abstract
The association between insects and fungi has evolved over millions of years and is ubiquitous in nature. This symbiotic relationship holds critical implications for both partners, the insects and the associated microbes. Numerous fungi are externally allied with bark beetles and form a close symbiosis, but the community structures of these fungi are largely unknown. In Yunnan Province in southwestern China, the beetles Tomicus yunnanensis, T. minor, and T. brevipilosus are major forest pests that cause large losses of two indigenous pines, Pinus yunnanensis and P. kesiya. In this study, we used the Illumina MiSeq PE300 platform to process 48 samples of epibiotic fungal communities pooled from 1348 beetles; the beetles were collected during both the branch- and trunk-infection sections from five locations across Yunnan Province. Considerably greater species richness was detected using high-throughput sequencing of amplified internal transcribed spacer 1 (ITS1) ribosomal DNA (rDNA) libraries than previously documented by using culture-dependent methods. In total, 1,413,600 reads were generated, and a 97% sequence-similarity cutoff produced eight phyla, 31 classes, 83 orders, 181 families, 331 genera, 471 species, and 1157 operational taxonomic units (OTUs), with 659, 621, and 609 OTUs being confined to T. yunnanensis, T. minor, and T. brevipilosus, respectively. Tomicus yunnanensis, T. minor, and T. brevipilosus had the similar OTUs richness and evenness of fungal communities in Yunnan Province; nevertheless, the two fungal community compositions associated with T. yunnanensis and T. minor were structurally similar to each other but distinct from that associated with T. brevipilosus. Lastly, the results of principal co-ordinates analysis suggested that epibiotic fungal community structures of the three Tomicus spp. were conditioned strongly by the locations and pine hosts but weakly by beetle species and infection sections. Our findings provide baseline knowledge regarding the epibiotic fungal communities of three major Tomicus spp. in southwestern China.
Collapse
|