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Ramudingana P, Mamphogoro TP, Kamutando CN, Maboko MM, Modika KY, Moloto KW, Thantsha MS. Antagonistic potential of endophytic fungal isolates of tomato (Solanum lycopersicum L.) fruits against post-harvest disease-causing pathogens of tomatoes: An in vitro investigation. Fungal Biol 2024; 128:1847-1858. [PMID: 38876537 DOI: 10.1016/j.funbio.2024.05.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Revised: 05/02/2024] [Accepted: 05/21/2024] [Indexed: 06/16/2024]
Abstract
Post-harvest decay of fresh agricultural produce is a major threat to food security globally. Synthetic fungicides, commonly used in practice for managing the post-harvest losses, have negative impacts on consumers' health. Studies have reported the effectiveness of fungal isolates from plants as biocontrol agents of post-harvest diseases, although this is still poorly established in tomatoes (Solanum lycopersicum L. cv. Jasmine). In this study, 800 endophytic fungi were isolated from mature green and ripe untreated and fungicide-treated tomato fruits grown in open soil and hydroponics systems. Of these, five isolates (Aureobasidium pullulans SUG4.1, Coprinellus micaceus SUG4.3, Epicoccum nigrum SGT8.6, Fusarium oxysporum HTR8.4, Preussia africana SUG3.1) showed antagonistic properties against selected post-harvest pathogens of tomatoes (Alternaria alternata, Fusarium solani, Fusarium oxysporum, Geotrichum candidum, Rhizopus stolonifera, Rhizoctonia solani), with Lactiplantibacillus plantarum as a positive control. P. africana SUG3.1 and C. micaceus SUG4.3 significantly inhibited growth of all the pathogens, with antagonistic capabilities comparable to that exhibited by L. plantarum. Furthermore, the isolates produced an array of enzymes, including among others, amylase, cellulose and protease; and were able to utilize several carbohydrates (glucose, lactose, maltose, mannitol, sucrose). In conclusion, P. africana SUG3.1 and C. micaceus SUG4.3 may complement L. plantarum as biocontrol agents against post-harvest pathogens of tomatoes.
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Affiliation(s)
- Phathutshedzo Ramudingana
- Gastro-Intestinal Microbiology and Biotechnology Unit, Agricultural Research Council-Animal Production, Private Bag X02, Irene, 0062, Pretoria, South Africa; Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Private Bag X20, Hatfield, Pretoria, South Africa.
| | - Tshifhiwa Paris Mamphogoro
- Gastro-Intestinal Microbiology and Biotechnology Unit, Agricultural Research Council-Animal Production, Private Bag X02, Irene, 0062, Pretoria, South Africa.
| | - Casper Nyaradzai Kamutando
- Department of Plant Production Sciences and Technologies, University of Zimbabwe, P.O. Box MP167, Mount Pleasant, Harare, 0263, Zimbabwe.
| | - Martin Makgose Maboko
- Crop Science Unit, Agricultural Research Council-Vegetables, Industrial and Medicinal Plants, Private Bag x293, Roodeplaat, 0001, Pretoria, South Africa.
| | - Kedibone Yvonne Modika
- Department of Meat Science, Agricultural Research Council-Animal Production, Private Bag X02, Irene, 0062, Pretoria, South Africa.
| | - Kgantjie Walter Moloto
- Department of Meat Science, Agricultural Research Council-Animal Production, Private Bag X02, Irene, 0062, Pretoria, South Africa.
| | - Mapitsi Silvester Thantsha
- Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Private Bag X20, Hatfield, Pretoria, South Africa.
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Lim TW, Choo KY, Lim RLH, Pui LP, Tan CP, Ho CW. The indigenous microbial diversity involved in the spontaneous fermentation of red dragon fruit ( Hylocereus polyrhizus) identified by means of molecular tools. Heliyon 2023; 9:e21940. [PMID: 38027851 PMCID: PMC10658323 DOI: 10.1016/j.heliyon.2023.e21940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2023] [Revised: 10/31/2023] [Accepted: 10/31/2023] [Indexed: 12/01/2023] Open
Abstract
Red dragon fruit (RDF) is well-known for its high nutritional content, especially the red pigment betacyanins that possess high antioxidant activity. Natural fermentation is an ancient yet outstanding technique that relies on the autochthonous microbiota from fruits and vegetables surfaces to preserve and improve the nutritional values and quality of the food product. The present study was to evaluate and identify the indigenous microbial community (bacteria and fungi) that are involved in the natural fermentation of RDF. Results revealed a total of twenty bacterial pure cultures and nine fungal pure cultures were successfully isolated from fermented red dragon fruit drink (FRDFD). For the first time, the PCR amplification of 16S rRNA and ITS regions and sequence analysis suggested nine genera of bacteria and three genera of fungi (Aureobasidium pullulans, Clavispora opuntiae, and Talaromyces aurantiacus) present in the FRDFD. Four dominant (≥10 % isolates) bacteria species identified from FRDFD were Klebsiella pneumonia, Brevibacillus parabrevis, Bacillus tequilensis and Bacillus subtilis. The carbohydrate fermentation test showed that all the indigenous microbes identified were able to serve as useful starter culture by fermenting sucrose and glucose, thereby producing acid to lower the pH of FRDFD to around pH 4 for better betacyanins stability. The present study provides a more comprehensive understanding of the indigenous microbial community that serves as the starter culture in the fermentation of RDF. Besides, this study provides a useful guide for future research to be conducted on studying the rare bacterial strains (such as B. tequilensis) identified from the FRDFD for their potential bioactivities and applications in medical treatment and functional foods industries.
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Affiliation(s)
- Teck Wei Lim
- Department of Biotechnology, Faculty of Applied Sciences, UCSI University, No. 1, Jalan Menara Gading, UCSI Heights, 56000, Cheras, Kuala Lumpur, Malaysia
- Department of Food Science and Nutrition, Faculty of Applied Sciences, UCSI University, No. 1, Jalan Menara Gading, UCSI Heights, 56000, Cheras, Kuala Lumpur, Malaysia
| | - Kah Yee Choo
- Department of Food Science and Nutrition, Faculty of Applied Sciences, UCSI University, No. 1, Jalan Menara Gading, UCSI Heights, 56000, Cheras, Kuala Lumpur, Malaysia
| | - Renee Lay Hong Lim
- Department of Biotechnology, Faculty of Applied Sciences, UCSI University, No. 1, Jalan Menara Gading, UCSI Heights, 56000, Cheras, Kuala Lumpur, Malaysia
| | - Liew Phing Pui
- Department of Food Science and Nutrition, Faculty of Applied Sciences, UCSI University, No. 1, Jalan Menara Gading, UCSI Heights, 56000, Cheras, Kuala Lumpur, Malaysia
| | - Chin Ping Tan
- Department of Food Technology, Faculty of Food Science and Technology, Universiti Putra Malaysia (UPM), 43400, Serdang, Selangor, Malaysia
| | - Chun Wai Ho
- Department of Food Science and Nutrition, Faculty of Applied Sciences, UCSI University, No. 1, Jalan Menara Gading, UCSI Heights, 56000, Cheras, Kuala Lumpur, Malaysia
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Iturritxa E, Hill AE, Torija MJ. Profiling potential brewing yeast from forest and vineyard ecosystems. Int J Food Microbiol 2023; 394:110187. [PMID: 36989930 DOI: 10.1016/j.ijfoodmicro.2023.110187] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Revised: 03/09/2023] [Accepted: 03/15/2023] [Indexed: 03/30/2023]
Abstract
The brewing ability of wild yeast strains obtained from forest and vineyards ecosystems was analysed and compared with commercial yeast strains. The selection of new yeast strains as a way to create new beer aromas and flavours and to use local strains to promote the proximity ingredients in brewing is a topic of interest in the craft beer sector. Seventy-six wild Saccharomyces and non-Saccharomyces isolates and eighteen control strains were evaluated for their enzymatic activity and brewing capacity. The early screening system was set up to profile their enzymatic activity, utilisation of wort sugars and the effect of hop acids and ethanol on yeast growth. The microvolume screening method allows a large number of samples to be studied at the same time, permitting an affordable and rapid characterization in a relatively short period of time. Twenty-eight strains were selected using this method and tested in small-scale fermentations. Finally, three of these strains, all belonging to the species Lachancea thermotolerans, showed great potential and adaptability to ferment different wort styles, although further studies will be necessary to test their possibilities as beer starters. Understanding yeast enzymatic profiles and the influence of beer ingredients on their fermentation activity provides a platform to select strains for further consideration in brewing research.
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Prabhu A, Nandagopal M S G, Peralam Yegneswaran P, Prabhu V, Verma U, Mani NK. Thread integrated smart-phone imaging facilitates early turning point colorimetric assay for microbes. RSC Adv 2020; 10:26853-26861. [PMID: 35515782 PMCID: PMC9055509 DOI: 10.1039/d0ra05190j] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 07/13/2020] [Indexed: 12/19/2022] Open
Abstract
This study employs a commercial multifilament cotton thread as a low-cost microbial identification assay integrated with smartphone-based imaging for high throughput and rapid detection of pathogens. The thread device with inter-twined fibers was drop-cast with test media and a pH indicator. The target pathogens scavenge the media components with different sugars and release acidic by-products, which in turn act as markers for pH-based color change. The developed thread-based proof-of-concept was demonstrated for the visual color detection (red to yellow) of Candida albicans (≈16 hours) and Escherichia coli (≈5 hours). Besides that, using a smart-phone to capture images of the thread-based colorimetric assay facilitates early detection of turning point of the pH-based color change and further reduces the detection time of pathogens viz. Candida albicans (≈10 hours) and Escherichia coli (≈1.5 hours). The reported thread and smartphone integrated image analysis works towards identifying the turning point of the colorimetric change rather than the end-point analysis. Using this approach, the interpretation time can be significantly reduced compared to the existing conventional microbial methods (≈24 hours). The thread-based colorimetric microbial assay represents a ready-to-use, low-cost and straightforward technology with applicability in resource-constrained environments, surpassing the need for frequent fresh media preparation, expensive instrumentation, complex fabrication techniques and expert intervention. The proposed method possesses high scalability and reproducibility, which can be further extended to bio(chemical) assays.
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Affiliation(s)
- Anusha Prabhu
- Department of Biotechnology, Manipal Institute of Technology, Manipal Academy of Higher Education Manipal 576104 Karnataka India
| | - Giri Nandagopal M S
- Department of Mechanical Engineering, Indian Institute of Technology Kharagpur 721302 India
| | - Prakash Peralam Yegneswaran
- Department of Microbiology, Kasturba Medical College Manipal, Manipal Academy of Higher Education Manipal 576104 Karnataka India
- Manipal Center for Infectious Diseases, Prasanna School of Public Health, Manipal Academy of Higher Education Manipal 576104 Karnataka India
| | - Vijendra Prabhu
- Department of Biotechnology, Manipal Institute of Technology, Manipal Academy of Higher Education Manipal 576104 Karnataka India
| | - Ujjwal Verma
- Department of Electronics & Communication, Manipal Institute of Technology, Manipal Academy of Higher Education Manipal 576104 Karnataka India
- Manipal Center for Infectious Diseases, Prasanna School of Public Health, Manipal Academy of Higher Education Manipal 576104 Karnataka India
| | - Naresh Kumar Mani
- Department of Biotechnology, Manipal Institute of Technology, Manipal Academy of Higher Education Manipal 576104 Karnataka India
- Manipal Center for Infectious Diseases, Prasanna School of Public Health, Manipal Academy of Higher Education Manipal 576104 Karnataka India
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Nystatin Profile on Candida Species in HIV/AIDS Patients with Oral Candidiasis: A Phenomenology Study. JOURNAL OF PURE AND APPLIED MICROBIOLOGY 2019. [DOI: 10.22207/jpam.13.4.12] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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Balasingham K, Valli C, Radhakrishnan L, Balasuramanyam D. Probiotic characterization of lactic acid bacteria isolated from swine intestine. Vet World 2017; 10:825-829. [PMID: 28831230 PMCID: PMC5553155 DOI: 10.14202/vetworld.2017.825-829] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2017] [Accepted: 05/29/2017] [Indexed: 11/25/2022] Open
Abstract
AIM A study was conducted with the objective to isolate probiotic microorganisms from swine intestine. MATERIALS AND METHODS In this study 63 isolates (24 caeca, 24 colon mucosal scrapings, and 15 rectal swab samples) were collected from Large White Yorkshire pigs. The isolates were inoculated and grown in de Man Rogosa Sharpe broth at 37°C with 5% CO2 for 48 h and subjected to morphological identification. Colonies having Gram-positive rods were selected for further physiological and biochemical identification tests, which were conducted in triplicate in two runs for each of the selected isolates using a standard protocol. Probiotic properties among the identified species were determined through the implementation of several tests related with pH tolerance, bile tolerance, and antimicrobial activity. RESULTS Morphological identification revealed that only 23 isolates were Gram-positive rods. Physiological tests performed on these 23 isolates further revealed that four of them did not exhibit any growth, at all conditions studied. The rest 19 isolates were, therefore, selected and subjected to biochemical tests. Six isolates were rejected because they were oxidase and nitrate reduction positive. From the 13 isolates subjected to sugar fermentation tests, speciation of only two isolates could be ascertained, one of the isolates showed characteristics for Lactobacillus acidophilus and the other for Lactobacillus plantarum. These two isolates were assessed for the strain possessing maximum probiotic property, and it was inferred that both - L. plantarum and L. acidophilus could tolerate a wide pH range (2-9), a wide bile concentration (0.05-0.3%) and revealed antimicrobial activity toward Escherichia coli, and Enterobacter spp. CONCLUSION L. plantarum and L. acidophilus were isolated from swine intestine and were found to have good probiotic properties.
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Affiliation(s)
- K. Balasingham
- Postgraduate Research Institute of Animal Sciences, Tamil Nadu Veterinary and Animal Sciences University, Chennai, Tamil Nadu, India
| | - C. Valli
- Institute of Animal Nutrition, Tamil Nadu Veterinary and Animal Sciences University, Chennai, Tamil Nadu, India
| | - L. Radhakrishnan
- Central Feed Technology Unit, Tamil Nadu Veterinary and Animal Sciences University, Chennai, Tamil Nadu, India
| | - D. Balasuramanyam
- Postgraduate Research Institute of Animal Sciences, Tamil Nadu Veterinary and Animal Sciences University, Chennai, Tamil Nadu, India
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