Morphological traits and RAPD markers for characterization and identification of minor Spanish olive cultivars from the Extremadura region

Hormonal Content and Gene Expression during Olive Fruit Growth and Ripening

The cultivated olive (Olea europaea L. subsp. europaea var. europaea) is one of the most valuable fruit trees worldwide. However, the hormonal mechanisms underlying the fruit growth and ripening in olives remain largely uncharacterized. In this study, we investigated the physiological and hormonal changes, by ultra-high performance liquid chromatography-mass spectrometry (UHPLC-MS), as well as the expression patterns of hormone-related genes, using quantitative real-time PCR (qRT-PCR) analysis, during fruit growth and ripening in two olive cultivars, 'Arbequina' and 'Picual', with contrasting fruit size and shape as well as fruit ripening duration. Hormonal profiling revealed that olive fruit growth involves a lowering of auxin (IAA), cytokinin (CKs), and jasmonic acid (JA) levels as well as a rise in salicylic acid (SA) levels from the endocarp lignification to the onset of fruit ripening in both cultivars. During olive fruit ripening, both abscisic acid (ABA) and anthocyanin levels rose, while JA levels fell, and SA levels showed no significant changes in either cultivar. By contrast, differential accumulation patterns of gibberellins (GAs) were found between the two cultivars during olive fruit growth and ripening. GA1 was not detected at either stage of fruit development in 'Arbequina', revealing a specific association between the GA1 and 'Picual', the cultivar with large sized, elongated, and fast-ripening fruit. Moreover, ABA may play a central role in regulating olive fruit ripening through transcriptional regulation of key ABA metabolism genes, whereas the IAA, CK, and GA levels and/or responsiveness differ between olive cultivars during olive fruit ripening. Taken together, the results indicate that the relative absence or presence of endogenous GA1 is associated with differences in fruit morphology and size as well as in the ripening duration in olives. Such detailed knowledge may be of help to design new strategies for effective manipulation of olive fruit size as well as ripening duration.

Species identification of polygonati rhizoma in China by both morphological and molecular marker methods

Morphological markers as well as two types of molecular markers, inter-sample sequence repeat (ISSR) and start codon targeted (SCoT) are suitable for species identification of the polygonati rhizoma germplasms. In this paper, we adopted these methods for the identification of rhizomes collected from 47 areas in China. Based on their morphological characters, the collected germplasms were classified into two populations, one with alternate leaf arrangement and the other with verticillate leaf arrangement, and they were comprised of five species and fourteen subgroups. Of the five species identified: Polygonatum kingianum, P. cirrhifolium, P. alternicirrhosum, and P. sibiricum belonged to one cluster, and P. cyrtonema belonged to a different cluster. According to the analysis of both ISSR and SCoT markers, all germplasms with greater genetic similarity were classified into one group. Especially, P. sibiricum and P. cirrhifolium, which shared ∼80% similarity, were clustered together, whereas the germplasms identified as P. kingianum with ∼86% similarity formed a separate clade. P. kingianum showed a much greater genetic similarity with P. cyrtonema than with P. sibiricum. The multidimensional scaling analysis further verified the accuracy and reliability of the molecular marker-based results. Thus, both morphological and molecular methods should be combined for the differentiation of germplasms such as those of polygonati rhizoma.

Recent developments in olive (Olea europaea L.) genetics and genomics: applications in taxonomy, varietal identification, traceability and breeding

The latest results in DNA markers application and genomic studies in olive. Olive (Olea europaea L.) is among the most ancient tree crops worldwide and the source of oil beneficial for human health. Despite this, few data on olive genetics are available in comparison with other cultivated plant species. Molecular information is mainly linked to molecular markers and their application to the study of DNA variation in the Olea europaea complex. In terms of genomic research, efforts have been made in sequencing, heralding the era of olive genomic. The present paper represents an update of a previous review work published in this journal in 2011. The review is again mainly focused on DNA markers, whose application still constitutes a relevant percentage of the most recently published researches. Since the olive genomic era has recently started, the latest results in this field are also being discussed.

Combination of morphological and molecular markers for the characterization of ancient native olive accessions in Central-Eastern Tunisia

Increasing olive germplasm erosion in the coastline of Tunisia has required an imperious conservation of the traditional genotypes before an ultimate disappearance. This region has been relatively neglected in the literature sources of olive identification. In this context, a prospection effort and a preliminary selection of olive accessions belonging to Central-Eastern Tunisia was carried out. Twenty-seven ancient olive accessions were studied by combining molecular and morphological data in order to fingerprint them, and to evaluate their relationships with classical cultivars. Compared to known classic Tunisian olive cultivars, the new prospected olive accessions were well distinguished, presenting a potential use as promising genotypes. The morphological and molecular data showed a high diversity between genotypes. 92 and 63 polymorphic bands were scored using 10 RAPD and 9 SSR markers, respectively. Significant correlation coefficients were obtained among fruit and stone sizes (r=0.90) and among their shapes (r=0.73). The genetic distances obtained with the two DNA marker systems were significantly correlated (r=0.45) according to Mantel's test. No significant correlation was observed between distances based on molecular and morphological markers. UPGMA analysis based on molecular data showed no clear clustering trends according to morphological traits or fruit use. Despite the high genetic variation among accessions in each prospected area, geographical origin seemed to have significant impact on the observed variability. The relationship between morphological and molecular data has confirmed that each marker expressed different aspects of variability. Integration between all markers will be useful for distinguishing new accessions and genotyping local varieties.