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Ağaç DK, Oktay E, Onuk B, Kabak M, Gündemir O. Shape variation in cranium, mandible and teeth in selected mouse strains. Anat Histol Embryol 2024; 53:e13064. [PMID: 38841825 DOI: 10.1111/ahe.13064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2024] [Revised: 05/15/2024] [Accepted: 05/16/2024] [Indexed: 06/07/2024]
Abstract
There are different strains of laboratory mouse used in many different fields. These strains differ anatomically. In order to determine these anatomical differences, shape analysis was conducted according to species. CD-1, C57bl/6 and Balb-c strains were preferred to study these differences. Forty-eight adult mouse strains belonging to these strains were utilized. The bones were photographed and geometric morphometry was applied to these photographs. Principal Component Analysis was applied to determine shape variations. In Principal component 1 for cranium, CD-1 and C57bl/6 strain groups showed different shape variations, while Balb-c strain group showed similar shape variations to the other strain groups. Principal Component 1 for the mandible separated the CD-1 and C57bl/6 strain groups in terms of shape variation. Principal Component 2 explained most of the variation between the C57bl/6 and CD-1 lineage groups. In PC1 for molars, the CD-1 group showed a different shape variation from the other groups. Mahalanobis distances and Procrustes distances were measured using Canonical variance analysis to explain the differences between the lineage groups. These measurements were statistically significant. For cranium, in canonical variate 1, CD-1 group of mouse and Balb-c group of mouse were separated from each other. In canonical variate 2, C57bl/6 group of mouse were separated from the other groups. For mandible, Balb-c group of mouse in canonical variate 1 and CD-1 group of mouse in canonical variate 2 were separated from the other groups. For molars, CD-1 group of mouse in canonical variate 1 and Balb-c group of mouse in canonical variate 2 were separated from the other groups. It was thought that these anatomical differences could be caused by genotypic factors as well as dietary differences and many different habits that would affect the way their muscles work.
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Affiliation(s)
- Duygu Küçük Ağaç
- Department of Veterinary, Şiran Mustafa Beyaz Vocational School, Gümüşhane University, Gumushane, Turkey
| | - Ece Oktay
- Institute of Graduate Studies, Istanbul University-Cerrahpaşa, Istanbul, Turkey
| | - Burcu Onuk
- Department of Anatomy, Faculty of Veterinary Medicine, Ondokuz Mayıs University, Samsun, Turkey
| | - Murat Kabak
- Department of Anatomy, Faculty of Veterinary Medicine, Ondokuz Mayıs University, Samsun, Turkey
| | - Ozan Gündemir
- Department of Anatomy, Faculty of Veterinary Medicine, Istanbul University-Cerrahpasa, Istanbul, Turkey
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Vitek NS, McDaniel SF, Bloch JI. Microevolutionary variation in molar morphology of Onychomys leucogaster decoupled from genetic structure. Evolution 2022; 76:2032-2048. [PMID: 35872621 DOI: 10.1111/evo.14576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Revised: 04/22/2022] [Accepted: 04/29/2022] [Indexed: 01/22/2023]
Abstract
In neutral models of quantitative trait evolution, both genetic and phenotypic divergence scale as random walks, producing a correlation between the two measures. However, complexity in the genotype-phenotype map may alter the correlation between genotypic and phenotypic divergence, even when both are evolving neutrally or nearly so. Understanding this correlation between phenotypic and genetic variation is critical for accurately interpreting the fossil record. This study compares the geographic structure and scaling of morphological variation of the shape of the first lower molar of 77 individuals of the northern grasshopper mouse Onychomys leucogaster to genome-wide SNP variation in the same sample. We found strong genetic structure but weak or absent morphological structure indicating that the scaling of each type of variation is decoupled from one another. Low PST values relative to FST values are consistent with a lack of morphological divergence in contrast to genetic divergence between groups. This lack of phenotypic structure and the presence of notable within-sample phenotypic variance are consistent with uniform selection or constraints on molar shape across a wide geographic and environmental range. Over time, this kind of decoupling may result in patterns of phenotypic stasis masking underlying genetic patterns.
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Affiliation(s)
- Natasha S Vitek
- Department of Biology, University of Florida, Gainesville, Florida, 32611.,Florida Museum of Natural History, University of Florida, Gainesville, Florida, 32611.,Department of Ecology and Evolution, Stony Brook University, Stony Brook, New York, 11794
| | - Stuart F McDaniel
- Department of Biology, University of Florida, Gainesville, Florida, 32611
| | - Jonathan I Bloch
- Florida Museum of Natural History, University of Florida, Gainesville, Florida, 32611
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Savriama Y, Romestaing C, Clair A, Averty L, Ulmann J, Ledevin R, Renaud S. Wild versus lab house mice: Effects of age, diet, and genetics on molar geometry and topography. J Anat 2022; 240:66-83. [PMID: 34333769 PMCID: PMC8655182 DOI: 10.1111/joa.13529] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Revised: 07/20/2021] [Accepted: 07/20/2021] [Indexed: 11/30/2022] Open
Abstract
Molar morphology is shaped by phylogenetic history and adaptive processes related to food processing. Topographic parameters of the occlusal surface, such as sharpness and relief, can be especially informative regarding diet preferences of a species. The occlusal surface can however be deeply modified by wear throughout an animal's life, potentially obliterating other signals. Age being difficult to assess in wild populations, especially small rodents, experimental studies of wear through age in laboratory populations may constitute a powerful way to assess its impact on molar geometry and topography, and to validate descriptors of molar morphology that could mitigate this issue. Molar morphology was therefore quantified using 3D geometric morphometrics and topographic estimates in four groups of house mice: wild-trapped mice, lab-bred offspring of these wild mice, typical laboratory mice, and their hybrids. Three descriptors of the molar morphology were considered: the surface of the whole molar row, the surface of the first upper molar, and a truncated template of the first upper molar mimicking advanced wear. Increasing wear with age was demonstrated in the different groups, with a more pronounced effect in the wild-trapped population. The geometry of the molar row is not only modified by wear, but also by the relative position of the late developing molars on the jaw due to loading during mastication. As a consequence, the alignment of the molars is modified in wild mice, showing a qualitative difference between wild animals and their lab-bred offspring. Results obtained from the lab should thus be transferred with caution to the interpretation of differences in wild populations. Topographic estimates computed for the first upper molar seems to provide more stable parameters than those based on the whole molar row, because issues related to non-planar occlusal surface along the molar row are discarded. The truncated template was proven efficient in discarding the wear effect to focus on genetic differences, allowing an efficient characterization of the hybridization signature between wild and lab mice. Dominance of the wild phenotype for the first molar shape supports that the lab strain evolved in a context of relaxation of the selective pressures related to nutrition.
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Affiliation(s)
| | - Caroline Romestaing
- Laboratoire d'Écologie des Hydrosystèmes Naturels et Anthropisés (LEHNA)ENTPEUniversité de LyonUniversité Claude Bernard Lyon 1UMR 5023 CNRSVilleurbanneFrance
| | - Angéline Clair
- Plateforme Animalerie Conventionnelle et Sauvage Expérimentale de la Doua (ACSED)Fédération de Recherche 3728Université de LyonUniversité Claude Bernard Lyon 1CNRSENS‐LyonINRAEINSAVetAgroSupVilleurbanneFrance
| | - Laetita Averty
- Plateforme Animalerie Conventionnelle et Sauvage Expérimentale de la Doua (ACSED)Fédération de Recherche 3728Université de LyonUniversité Claude Bernard Lyon 1CNRSENS‐LyonINRAEINSAVetAgroSupVilleurbanneFrance
| | - Julie Ulmann
- Plateforme Animalerie Conventionnelle et Sauvage Expérimentale de la Doua (ACSED)Fédération de Recherche 3728Université de LyonUniversité Claude Bernard Lyon 1CNRSENS‐LyonINRAEINSAVetAgroSupVilleurbanneFrance
| | - Ronan Ledevin
- PACEAUMR 5199 CNRSUniversité de BordeauxPessacFrance
| | - Sabrina Renaud
- Laboratoire de Biométrie et Biologie EvolutiveUMR 5558CNRSUniversité Claude Bernard Lyon 1Université de LyonVilleurbanneFrance
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Renaud S, Girard C, Dufour AB. Morphometric variance, evolutionary constraints and their change through time in Late Devonian Palmatolepis conodonts. Evolution 2021; 75:2911-2929. [PMID: 34396530 DOI: 10.1111/evo.14330] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Revised: 07/08/2021] [Accepted: 07/29/2021] [Indexed: 11/28/2022]
Abstract
Phenotypic variation is the raw material of evolution. Standing variation can facilitate response to selection along "lines of least evolutionary resistance", but selection itself might alter the structure of the variance. Shape was quantified using 2D geometric morphometrics in Palmatolepis conodonts through the Late Devonian period. Patterns of variance were characterized along the record by the variance-covariance matrix (P-matrix) and its first axis (Pmax). The Late Frasnian was marked by environmental oscillations culminating with the Frasnian/Famennian mass extinction. A shape response was associated with these fluctuations, together with a deflection of the Pmax and the P-matrix. Thereafter, along the Famennian, Palmatolepis mean shape shifted from broad elements with a large platform to slender elements devoid of platform. This shift in shape was associated with a reorientation of Pmax and the P-matrix, due to profound changes in the functioning of the elements selecting for new types of variants. Both cases provide empirical evidences that moving adaptive optimum can reorient phenotypic variation, boosting response to environmental changes. On such time scales, the question seems thus not to be whether the P-matrix is stable, but how it is varying in response to changes in selection regimes and shifts in adaptive optimum. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- Sabrina Renaud
- Laboratoire de Biométrie et Biologie Evolutive, UMR 5558, CNRS, Université Claude Bernard Lyon 1, Université de Lyon, Villeurbanne, 69622, France
| | - Catherine Girard
- Institut des Sciences de l'Evolution de Montpellier (ISEM), Université de Montpellier, CNRS, EPHE, IRD, Montpellier, France
| | - Anne-Béatrice Dufour
- Laboratoire de Biométrie et Biologie Evolutive, UMR 5558, CNRS, Université Claude Bernard Lyon 1, Université de Lyon, Villeurbanne, 69622, France
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Esquivel DA, Maestri R, Santana SE. Evolutionary implications of dental anomalies in bats. Evolution 2021; 75:1087-1096. [PMID: 33742462 DOI: 10.1111/evo.14211] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 02/05/2021] [Accepted: 02/17/2021] [Indexed: 01/17/2023]
Abstract
The gain or loss of anatomical features is an important mechanism of morphological evolution and ecological adaptation. Dental anomalies-the loss or gain of teeth-are widespread and a potential source of craniodental specialization among mammals, yet their macroevolutionary patterns have been rarely explored. We present the first phylogenetic comparative study of dental anomalies across the second largest mammal Order, Chiroptera (bats). We conducted an extensive literature review and surveyed a large sample of museum specimens to analyze the types and prevalence of dental anomalies across bats, and performed phylogenetic comparative analyses to investigate the role of phylogenetic history and dietary specialization on incidence of dental anomalies. We found dental anomalies have a significant phylogenetic signal, suggesting they are not simply the result of idiosyncratic mutations or random developmental disorders, but may have ancestral genetic origins or result from shared developmental pathways among closely related species. The incidence of dental anomalies was not associated with diet categories, suggesting no effect of craniodental specialization on dental anomalies across bats. Our results give insight into the macroevolutionary patterns of dental anomalies in bats, and provide a foundation for investigating new hypotheses underlying the evolution of dental variation and diversity in mammals.
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Affiliation(s)
- Diego A Esquivel
- Programa de Pós-Graduação em Biologia Animal, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS, 91501-970, Brazil.,Fundación Kurupira, Bogotá, DC, 110921, Colombia
| | - Renan Maestri
- Department of Ecology, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS, 91501-970, Brazil.,Negaunee Integrative Research Center, Field Museum of Natural History, Chicago, Illinois, 60605
| | - Sharlene E Santana
- Department of Biology, University of Washington, Seattle, Washington, 98195.,Burke Museum of Natural History and Culture, University of Washington, Seattle, Washington, 98195
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Hmga2 regulation of tooth formation and association with Sox2 and Nanog expression. Biochem Biophys Res Commun 2019; 509:1008-1014. [DOI: 10.1016/j.bbrc.2019.01.017] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Accepted: 01/04/2019] [Indexed: 01/01/2023]
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