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Kalra A, Goel S, Elias AA. Understanding role of roots in plant response to drought: Way forward to climate-resilient crops. THE PLANT GENOME 2024; 17:e20395. [PMID: 37853948 DOI: 10.1002/tpg2.20395] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2023] [Revised: 07/26/2023] [Accepted: 09/18/2023] [Indexed: 10/20/2023]
Abstract
Drought stress leads to a significant amount of agricultural crop loss. Thus, with changing climatic conditions, it is important to develop resilience measures in agricultural systems against drought stress. Roots play a crucial role in regulating plant development under drought stress. In this review, we have summarized the studies on the role of roots and root-mediated plant responses. We have also discussed the importance of root system architecture (RSA) and the various structural and anatomical changes that it undergoes to increase survival and productivity under drought. Various genes, transcription factors, and quantitative trait loci involved in regulating root growth and development are also discussed. A summarization of various instruments and software that can be used for high-throughput phenotyping in the field is also provided in this review. More comprehensive studies are required to help build a detailed understanding of RSA and associated traits for breeding drought-resilient cultivars.
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Affiliation(s)
- Anmol Kalra
- Department of Botany, University of Delhi, North Campus, Delhi, India
| | - Shailendra Goel
- Department of Botany, University of Delhi, North Campus, Delhi, India
| | - Ani A Elias
- ICFRE - Institute of Forest Genetics and Tree Breeding (ICFRE - IFGTB), Coimbatore, India
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Makebe A, Shimelis H, Mashilo J. Selection of M5 mutant lines of wheat ( Triticum aestivum L.) for agronomic traits and biomass allocation under drought stress and non-stressed conditions. FRONTIERS IN PLANT SCIENCE 2024; 15:1314014. [PMID: 38419777 PMCID: PMC10899435 DOI: 10.3389/fpls.2024.1314014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 01/22/2024] [Indexed: 03/02/2024]
Abstract
Introduction In the face of climate changes and limited water availability for irrigated crop production, enhanced drought tolerance and adaptation is vital to improve wheat productivity. The objective of this study was to determine the responses of newly bred and advanced mutant lines of wheat based on agronomic traits and biomass allocation under drought-stressed and non-stressed environments for production and breeding. Methods Fifty-three mutant lines, including the parental check and six check varieties, were evaluated under non-stressed (NS) and drought stressed (DS) conditions in the field and controlled environments using a 20 x 3 alpha lattice design with two replicates. The following agronomic data were collected: days to 50% heading (DTH), days to maturity (DTM), plant height (PH), number of productive tillers (PTN), shoot biomass (SB), root biomass (RB), total biomass (TB), root: shoot ratio (RSR), spike length (SL), thousand seeds weight (TSW) and grain yield (GY). Data were analyzed and summarized using various statistical procedures and drought tolerance indices were computed based on grain yield under NS and DS conditions. Results Significant (P < 0.05) differences were recorded among the mutant lines for most assessed traits under NS and DS conditions. Grain yield positively and significantly (p < 0.001) correlated with PTN (r = 0.85), RB (r = 0.75), SB (r = 0.80), SL (r =0.73), TB (r = 0.65), and TSW (r = 0.67) under DS condition. Principal component analysis revealed three components contributing to 78.55% and 77.21% of the total variability for the assessed agronomic traits under DS and NS conditions, respectively. The following traits: GY, RB, SB, and PTN explained most of the variation with high loading scores under DS condition. Geometric mean productivity (GMP), mean productivity (MP), harmonic mean (HM), and stress tolerance index (STI) were identified as the best drought tolerance indices for the identification of tolerant lines with positive correlations with GY under NS and DS conditions. Discussion Among the advanced lines tested, LMA16, LMA37, LMA47, LMA2, and LMA42 were selected as the superior lines with high performance and drought tolerance. The selected lines are recommended for multi-environment trails and release for production in water-limited environments in South Africa.
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Affiliation(s)
- Athenkosi Makebe
- African Centre for Crop Improvement (ACCI), University of KwaZulu-Natal, Pietermaritzburg, South Africa
| | - Hussein Shimelis
- African Centre for Crop Improvement (ACCI), University of KwaZulu-Natal, Pietermaritzburg, South Africa
| | - Jacob Mashilo
- African Centre for Crop Improvement (ACCI), University of KwaZulu-Natal, Pietermaritzburg, South Africa
- Limpopo Department of Agriculture and Rural Development, Bela-Bela, South Africa
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Samanta S, Seth CS, Roychoudhury A. The molecular paradigm of reactive oxygen species (ROS) and reactive nitrogen species (RNS) with different phytohormone signaling pathways during drought stress in plants. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 206:108259. [PMID: 38154293 DOI: 10.1016/j.plaphy.2023.108259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2023] [Revised: 11/13/2023] [Accepted: 12/03/2023] [Indexed: 12/30/2023]
Abstract
Drought is undoubtedly a major environmental constraint that negatively affects agricultural yield and productivity throughout the globe. Plants are extremely vulnerable to drought which imposes several physiological, biochemical and molecular perturbations. Increased generation of reactive oxygen species (ROS) and reactive nitrogen species (RNS) in different plant organs is one of the inevitable consequences of drought. ROS and RNS are toxic byproducts of metabolic reactions and poise oxidative stress and nitrosative stress that are detrimental for plants. In spite of toxic effects, these potentially active radicals also play a beneficial role in mediating several signal transduction events that lead to plant acclimation and enhanced survival under harsh environmental conditions. The precise understanding of ROS and RNS signaling and their molecular paradigm with different phytohormones, such as auxin, gibberellin, cytokinin, abscisic acid, ethylene, brassinosteroids, strigolactones, jasmonic acid, salicylic acid and melatonin play a pivotal role for maintaining plant fitness and resilience to counteract drought toxicity. Therefore, the present review provides an overview of integrated systemic signaling between ROS, RNS and phytohormones during drought stress based on past and recent advancements and their influential role in conferring protection against drought-induced damages in different plant species. Indeed, it would not be presumptuous to hope that the detailed knowledge provided in this review will be helpful for designing drought-tolerant crop cultivars in the forthcoming times.
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Affiliation(s)
- Santanu Samanta
- Post Graduate Department of Biotechnology, St. Xavier's College (Autonomous), 30, Mother Teresa Sarani, Kolkata, 700016, West Bengal, India
| | | | - Aryadeep Roychoudhury
- Discipline of Life Sciences, School of Sciences, Indira Gandhi National Open University, Maidan Garhi, New Delhi, 110068, India.
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Yu X, Liu Y, Cao P, Zeng X, Xu B, Luo F, Yang X, Wang X, Wang X, Xiao X, Yang L, Lei T. Morphological Structure and Physiological and Biochemical Responses to Drought Stress of Iris japonica. PLANTS (BASEL, SWITZERLAND) 2023; 12:3729. [PMID: 37960085 PMCID: PMC10648531 DOI: 10.3390/plants12213729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2023] [Revised: 10/17/2023] [Accepted: 10/29/2023] [Indexed: 11/15/2023]
Abstract
Drought is among the most important abiotic stresses on plants, so research on the physiological regulation mechanisms of plants under drought stress can critically increase the economic and ecological value of plants in arid regions. In this study, the effects of drought stress on the growth status and biochemical indicators of Iris japonica were explored. Under drought stress, the root system, leaves, rhizomes, and terrestrial stems of plants were sequentially affected; the root system was sparse and slender; and the leaves lost their luster and gradually wilted. Among the physiological changes, the increase in the proline and soluble protein content of Iris japonica enhanced the cellular osmotic pressure and reduced the water loss. In anatomical structures, I. japonica chloroplasts were deformed after drought treatment, whereas the anatomical structures of roots did not substantially change. Plant antioxidant systems play an important role in maintaining cellular homeostasis; but, as drought stress intensified, the soluble sugar content of terrestrial stems was reduced by 55%, and the ascorbate peroxidase, glutathione reductase, and monodehydroascorbate reductase (MDHAR) activities of leaves and the MDHAR activity of roots were reduced by 29%, 40%, 22%, and 77%, respectively. Overall, I. japonica was resistant to 63 days of severe drought stress and resisted drought through various physiological responses. These findings provide a basis for the application of I. japonica in water-scarce areas.
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Affiliation(s)
- Xiaofang Yu
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Yujia Liu
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Panpan Cao
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Xiaoxuan Zeng
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Bin Xu
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Fuwen Luo
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Xuan Yang
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Xiantong Wang
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Xiaoyu Wang
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Xue Xiao
- Triticeae Research Institute, Sichuan Agricultural University, Chengdu 611130, China;
| | - Lijuan Yang
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
| | - Ting Lei
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu 611130, China; (Y.L.); (P.C.); (X.Z.); (B.X.); (F.L.); (X.Y.); (X.W.); (X.W.); (L.Y.); (T.L.)
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Arnhold J, Grunwald D, Braun-Kiewnick A, Koch HJ. Effect of crop rotational position and nitrogen supply on root development and yield formation of winter wheat. FRONTIERS IN PLANT SCIENCE 2023; 14:1265994. [PMID: 37936943 PMCID: PMC10626475 DOI: 10.3389/fpls.2023.1265994] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Accepted: 09/18/2023] [Indexed: 11/09/2023]
Abstract
The lower yield of wheat grown after wheat (second wheat) compared with the first wheat after a break crop is frequently attributed to fungal disease occurrence, but has also been found without visible disease infection; thus, other factors might be responsible for the lower yield of the second wheat. The aims of this study were to analyze the effects of growing wheat as first and second wheat after oilseed rape, as well as monoculture in a long-term field experiment over three years on (i) aboveground biomass formation, root development and nutrient acquisition during the growing season, (ii) take-all occurrence, and (iii) grain yield and yield components. Subsoil root length density of winter wheat was significantly higher after oilseed rape as pre-crop than after wheat, which was independent of take-all occurrence. Differences in wheat aboveground biomass occurred at early growth stages and were persistent until harvest. Grain yield loss correlated well with take-all disease severity in a wet year but yield differences among crop rotational positions occurred also in a dry year without visible fungal infection. Thus, an effect of the crop rotational position of wheat beyond take-all disease pressure can be assumed. Overall, wheat root length density might be the key to understand wheat biomass formation and grain yield in different crop rotational positions.
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Affiliation(s)
- Jessica Arnhold
- Department of Agronomy, Institute of Sugar Beet Research, Göttingen, Germany
| | - Dennis Grunwald
- Department of Agronomy, Institute of Sugar Beet Research, Göttingen, Germany
| | - Andrea Braun-Kiewnick
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn-Institute - Federal Research Centre for Cultivated Plants, Braunschweig, Germany
| | - Heinz-Josef Koch
- Department of Agronomy, Institute of Sugar Beet Research, Göttingen, Germany
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Xiao Y, Guo W, Qi X, Hashem MS, Wang D, Sun C. Differences in Cadmium Uptake and Accumulation in Seedlings of Wheat Varieties with Low- and High-Grain Cadmium Accumulation under Different Drought Stresses. PLANTS (BASEL, SWITZERLAND) 2023; 12:3499. [PMID: 37836239 PMCID: PMC10574867 DOI: 10.3390/plants12193499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 09/25/2023] [Accepted: 10/03/2023] [Indexed: 10/15/2023]
Abstract
Cadmium (Cd) and drought, as abiotic stresses, have long been significant challenges for crop growth and agricultural production. However, there have been relatively few studies conducted on the effects of drought stress on Cd uptake, especially regarding the differences in Cd uptake characterization in varieties with varying Cd accumulation under different drought stress. To investigate the effects of drought conditions on Cd uptake by wheat in different genotypes under specific background levels of Cd pollution, we validated the differences in root absorption characteristics of low- (YM) and high-grain Cd accumulating wheat genotypes (XM) using non-invasive micro-test technology, and we conducted a hydroponic experiment on the Cd addition and different drought levels in a climate-controlled chamber. The biomass, root morphology, Cd uptake, and accumulation were determined under Cd (100 µmol L-1) and different drought levels of 0% (0 MPa), 5% (-0.100 Mpa), 10% (-0.200 Mpa), and 15% (-0.388 Mpa) simulated by polyethylene glycol (PEG-6000). We found that the simultaneous exposure to Cd and drought had a suppressive effect on the total root lengths, root surface areas, and root volumes of XM and YM, albeit with distinct patterns of variation. As the concentration of PEG-6000 increased, the Cd concentrations and the amount of Cd accumulated in the roots and shoots of XM and YM decreased. Specifically, the Cd concentration in the roots exhibited a reduction ranging from 12.51% to 66.90%, while the Cd concentration in the shoots experienced an even greater decrease of 50.46% to 80.57%. The PEG-6000 concentration was significantly negatively correlated (p < 0.001) with Cd concentration of roots and shoots and Cd accumulation in roots, shoots, and the whole plants and significantly negatively correlated (p < 0.05) with the total length, surface area, and volume of roots. This study confirms that drought stress (5% PEG-6000) can decrease the uptake and accumulation of Cd in wheat seedlings without significant inhibition of biomass, and the change of root morphology (root length) and the decrease of Cd concentration in roots may be the main direct pathways for achieving these effects under drought stress. This research provides a new perspective and idea for water management in Cd-contaminated farmland.
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Affiliation(s)
- Yatao Xiao
- Institute of Farmland Irrigation of CAAS/Key Laboratory of High-Efficient and Safe Utilization of Agriculture Water Resources, Chinese Academy of Agricultural Sciences, Xinxiang 453003, China;
- College of Mechanical and Electrical Engineering, Henan Agricultural University, Zhengzhou 450002, China; (D.W.)
| | - Wei Guo
- Institute of Farmland Irrigation of CAAS/Key Laboratory of High-Efficient and Safe Utilization of Agriculture Water Resources, Chinese Academy of Agricultural Sciences, Xinxiang 453003, China;
| | - Xuebin Qi
- Institute of Farmland Irrigation of CAAS/Key Laboratory of High-Efficient and Safe Utilization of Agriculture Water Resources, Chinese Academy of Agricultural Sciences, Xinxiang 453003, China;
| | - Mahmoud S. Hashem
- Agricultural Research Center, Agricultural Engineering Research Institute (AEnRI), Giza 256, Egypt
| | - Dezhe Wang
- College of Mechanical and Electrical Engineering, Henan Agricultural University, Zhengzhou 450002, China; (D.W.)
| | - Chaoxiang Sun
- College of Mechanical and Electrical Engineering, Henan Agricultural University, Zhengzhou 450002, China; (D.W.)
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Gupta A, Kaur L, Kaur G. Drought stress detection technique for wheat crop using machine learning. PeerJ Comput Sci 2023; 9:e1268. [PMID: 37346648 PMCID: PMC10280683 DOI: 10.7717/peerj-cs.1268] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Accepted: 02/10/2023] [Indexed: 06/23/2023]
Abstract
The workflow of this research is based on numerous hypotheses involving the usage of pre-processing methods, wheat canopy segmentation methods, and whether the existing models from the past research can be adapted to classify wheat crop water stress. Hence, to construct an automation model for water stress detection, it was found that pre-processing operations known as total variation with L1 data fidelity term (TV-L1) denoising with a Primal-Dual algorithm and min-max contrast stretching are most useful. For wheat canopy segmentation curve fit based K-means algorithm (Cfit-kmeans) was also validated for the most accurate segmentation using intersection over union metric. For automated water stress detection, rapid prototyping of machine learning models revealed that there is a need only to explore nine models. After extensive grid search-based hyper-parameter tuning of machine learning algorithms and 10 K fold cross validation it was found that out of nine different machine algorithms tested, the random forest algorithm has the highest global diagnostic accuracy of 91.164% and is the most suitable for constructing water stress detection models.
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Affiliation(s)
- Ankita Gupta
- Computer Science and Engineering, Punjabi University, Patiala, Punjab, India
| | - Lakhwinder Kaur
- Computer Science and Engineering, Punjabi University, Patiala, Punjab, India
| | - Gurmeet Kaur
- Electronics and Communication Engineering, Punjabi University, Patiala, Punjab, India
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Yang Y, Nan R, Mi T, Song Y, Shi F, Liu X, Wang Y, Sun F, Xi Y, Zhang C. Rapid and Nondestructive Evaluation of Wheat Chlorophyll under Drought Stress Using Hyperspectral Imaging. Int J Mol Sci 2023; 24:ijms24065825. [PMID: 36982900 PMCID: PMC10056805 DOI: 10.3390/ijms24065825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 03/11/2023] [Accepted: 03/17/2023] [Indexed: 03/30/2023] Open
Abstract
Chlorophyll drives plant photosynthesis. Under stress conditions, leaf chlorophyll content changes dramatically, which could provide insight into plant photosynthesis and drought resistance. Compared to traditional methods of evaluating chlorophyll content, hyperspectral imaging is more efficient and accurate and benefits from being a nondestructive technique. However, the relationships between chlorophyll content and hyperspectral characteristics of wheat leaves with wide genetic diversity and different treatments have rarely been reported. In this study, using 335 wheat varieties, we analyzed the hyperspectral characteristics of flag leaves and the relationships thereof with SPAD values at the grain-filling stage under control and drought stress. The hyperspectral information of wheat flag leaves significantly differed between control and drought stress conditions in the 550-700 nm region. Hyperspectral reflectance at 549 nm (r = -0.64) and the first derivative at 735 nm (r = 0.68) exhibited the strongest correlations with SPAD values. Hyperspectral reflectance at 536, 596, and 674 nm, and the first derivatives bands at 756 and 778 nm, were useful for estimating SPAD values. The combination of spectrum and image characteristics (L*, a*, and b*) can improve the estimation accuracy of SPAD values (optimal performance of RFR, relative error, 7.35%; root mean square error, 4.439; R2, 0.61). The models established in this study are efficient for evaluating chlorophyll content and provide insight into photosynthesis and drought resistance. This study can provide a reference for high-throughput phenotypic analysis and genetic breeding of wheat and other crops.
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Affiliation(s)
- Yucun Yang
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
| | - Rui Nan
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
| | - Tongxi Mi
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
| | - Yingxin Song
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
| | - Fanghui Shi
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
| | - Xinran Liu
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
| | - Yunqi Wang
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
| | - Fengli Sun
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
- Key Laboratory of Wheat Biology and Genetic Improvement on Northwestern China, Ministry of Agriculture, Xianyang 712100, China
| | - Yajun Xi
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
- Key Laboratory of Wheat Biology and Genetic Improvement on Northwestern China, Ministry of Agriculture, Xianyang 712100, China
| | - Chao Zhang
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Xianyang 712100, China
- Key Laboratory of Wheat Biology and Genetic Improvement on Northwestern China, Ministry of Agriculture, Xianyang 712100, China
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