Traditional soil fertility management ameliorates climate change impacts on traditional Andean crops within smallholder farming systems

Global changes, particularly rising temperatures, threaten food security in smallholder mountain communities by impacting the suitability of cultivation areas for many crops. Land-use intensification, associated with agrochemical use and tillage, threatens soil health and overall agroecosystem resilience. In the Andean region, farmers often cultivate crops at multiple elevations. Warming climates have led to a shift in cultivation upslope, but this is not feasible in many areas. Traditional soil fertility management practices together with a focus on traditional (orphan) crops offers promise to cope with rapid climate warming in the region. To understand the impacts of warming and changing nutrient management, we established two side-by-side experiments using the traditional Andean crops Oxalis tuberosa (Oca) and Lupinus mutabilis (Tarwi) at three elevations, each with two fertility treatments (organic and synthetic). Soil and climate data (i.e., temperature and precipitation) were collected throughout the growing season, and crop performance was evaluated through impacts on yield and other growth metrics (e.g., biomass, pest incidence). We used two-way ANOVA to assess the influence of site (elevation) and management type (organic vs. synthetic) on crop performance. Results indicated that warmer climates (i.e., lowest elevation) negatively impact the production and performance of O. tuberosa, but that organic fertilization (sheep manure) can help maintain crop yield and biomass production in warmer conditions relatively to synthetic nutrient inputs. In contrast, L. mutabilis showed accelerated growth in warmer conditions, but grain yield and biomass production were not significantly affected by site and showed no interaction with nutrient management. Our findings highlight that climate warming represents a serious threat to small-scale crop production in the Peruvian Andes and could cause severe declines in the production of locally important crops. Additionally, the continued reliance on traditional crops with organic inputs, instead of synthetic fertilizers, may help support agricultural productivity and resilience under climate change.

Agroforestry enhances biological activity, diversity and soil-based ecosystem functions in mountain agroecosystems of Latin America: A meta-analysis

Mountain agroecosystems in Latin America provide multiple ecosystem functions (EFs) and products from global to local scales, particularly for the rural communities who depend on them. Agroforestry has been proposed as a climate-smart farming strategy throughout much of the region to help conserve biodiversity and enhance multiple EFs, especially in mountainous regions. However, large-scale synthesis on the potential of agroforestry across Latin America is lacking. To understand the potential impacts of agroforestry at the continental level, we conducted a meta-analysis examining the effects of agroforestry on biological activity and diversity (BIAD) and multiple EFs across mountain agroecosystems of Latin America. A total of 78 studies were selected based on a formalized literature search in the Web of Science. We analysed differences between (i) silvoarable systems versus cropland, (ii) silvopastoral systems versus pastureland, and (iii) agroforestry versus forest systems, based on response ratios. Response ratios were further used to understand how climate type, precipitation and soil properties (texture) influence key EFs (carbon sequestration, nutrient provision, erosion control, yield production) and BIAD in agroforestry systems. Results revealed that BIAD and EFs related to carbon sequestration and nutrient provisioning were generally higher in agroforestry systems (silvopastoral and silvoarable) compared to croplands and pasturelands without trees. However, the impacts of agroforestry systems on crop yields varied depending on the system considered (i.e., coffee vs. cereals), while forest systems generally provided greater levels of BIAD and EFs than agroforestry systems. Further analysis demonstrated that the impacts of agroforestry systems on BIAD and EFs depend greatly on climate type, soil, and precipitation. For example, silvoarable systems appear to generate the greatest benefits in arid or tropical climates, on sandier soils, and under lower precipitation regimes. Overall, our findings highlight the widespread potential of agroforestry systems to BIAD and multiple EFs across montane regions of Latin America.

Pseudophoenix ekmanii (Arecaceae) seeds at suboptimal temperature show reduced imbibition rates and enhanced expression of genes related to germination inhibition

Pseudophoenix ekmanii is a critically endangered palm species that can be found in the southeast of the Dominican Republic. The temperatures to which P. ekmanii seeds are exposed upon dispersal range from 32 to 23 °C (max and min) and can reach a low of approximately 20 °C in January. Our aim was to analyse the effect of suboptimal (20 °C) and optimal (30 °C) germination temperature on seed imbibition, moisture content, embryo growth and gene expression patterns in this tropical palm species. Seed imbibition was tracked using whole seeds, while moisture content was assessed for individual seed sections. Embryo and whole seed size were measured before and after full imbibition. For transcriptome sequencing, mRNA was extracted from embryo tissues only and the resulting reads were mapped against the Elaeis guineensis reference genome. Differentially expressed genes were identified after statistical analysis and subsequently probed for enrichment of Gene Ontology categories 'Biological process' and 'Cellular component'. Our results show that prolonged exposure to 20 °C slows whole seed and embryo imbibition and causes germination to be both delayed and inhibited. Embryonic transcriptome patterns associated with the negative regulation of germination by suboptimal temperature include up-regulation of ABA biosynthesis genes, ABA-responsive genes, as well as other genes previously related to physiological dormancy and inhibition of germination. Thus, our manuscript provides the first insights into the gene expression patterns involved in the response to suboptimal temperature during seed imbibition in a tropical palm species.

Effects of a spaceflight environment on heritable changes in wheat gene expression

Once it was established that the spaceflight environment was not a drastic impediment to plant growth, a remaining space biology question was whether long-term spaceflight exposure could cause changes in subsequent generations, even if they were returned to a normal Earth environment. In this study, we used a genomic approach to address this question. We tested whether changes in gene expression patterns occur in wheat plants that are several generations removed from growth in space, compared to wheat plants with no spaceflight exposure in their lineage. Wheat flown on Mir for 167 days in 1991 formed viable seeds back on Earth. These seeds were grown on the ground for three additional generations. Gene expression of fourth-generation Mir flight leaves was compared to that of the control leaves by using custom-made wheat microarrays. The data were evaluated using analysis of variance, and transcript abundance of each gene was contrasted among samples with t-tests. After corrections were made for multiple tests, none of the wheat genes represented on the microarrays showed a statistically significant difference in expression between wheat that has spaceflight exposure in their lineage and plants with no spaceflight exposure. This suggests that exposure to the spaceflight environment in low Earth orbit space stations does not cause significant, heritable changes in gene expression patterns in plants.