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Keppanan R, Karuppannasamy A, Nagaraja BC, Thiruvengadam V, Kesavan S, Dhawane YA, Ramasamy A. Effectiveness of chitosan nanohydrogel mediated encapsulation of EcR dsRNA against the whitefly, Bemisia tabaci Asia-I (Gennedius) (Hemiptera: Aleyordidae). Pestic Biochem Physiol 2024; 198:105712. [PMID: 38225070 DOI: 10.1016/j.pestbp.2023.105712] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Revised: 11/19/2023] [Accepted: 11/26/2023] [Indexed: 01/17/2024]
Abstract
Bemisia tabaci is a global invasive pest causing substantial loss on several economically important crops and has developed a very high level of resistance to insecticides making current management practices ineffective. Thus, the novel pest management strategy like RNA interference (RNAi) has emerged as a potential molecular tool in the management of insect pests particularly B. tabaci. The present study investigated RNAi mediated silencing of the Ecdysone Receptor (EcR) gene in B. tabaci Asia-I using biodegradable Chitosan Nanoparticles (CNPs) hydrogel containing EcR dsRNA. The formation of nanohydrogel and dsRNA loading were characterized by gel retardation assay, scanning electron microscopy (SEM); transmission electron microscopy (TEM) and Fourier transform infrared microscopy (FTIR). The stability of CNPs/dsRNA was assessed by exposure to direct sunlight and UV light for different time periods. The CNPs/dsRNA exhibited increased stability over the untreated control and further confirmed by bioassay studies which yielded mortality over 80% and effectively down regulated the expression of the EcR gene as confirmed by qRT-PCR analysis. These investigations provide potential avenues for advancing innovative pest management strategies using biopolymer CNPs hydrogel, which can enhance the efficiency of dsRNA as a safe and targeted solution in the management of whiteflies.
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Affiliation(s)
- Ravindran Keppanan
- ICAR - Indian Institute of Horticultural Research, Bengaluru 560089, India
| | - Ashok Karuppannasamy
- ICAR - Indian Institute of Horticultural Research, Bengaluru 560089, India; Tamil Nadu Agricultural University, Coimbatore 641003, Tamil Nadu, India; Tata Institute for Genetics and Society, Bengaluru 560065, Karnataka, India.
| | - Bhargava Chikmagalur Nagaraja
- ICAR - Indian Institute of Horticultural Research, Bengaluru 560089, India; University of Agricultural Sciences, Bengaluru 560065, Karnataka, India
| | | | - Subaharan Kesavan
- ICAR - National Bureau of Agricultural Insect Resources, Bengaluru 560024, Karnataka, India
| | - Yogi Arun Dhawane
- ICAR - Indian Institute of Horticultural Research, Bengaluru 560089, India
| | - Asokan Ramasamy
- ICAR - Indian Institute of Horticultural Research, Bengaluru 560089, India.
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Pradhan SK, Karuppannasamy A, Sujatha PM, Nagaraja BC, Narayanappa AC, Chalapathi P, Dhawane Y, Bynakal S, Riegler M, Maligeppagol M, Ramasamy A. Embryonic microinjection of ribonucleoprotein complex (Cas9+sgRNA) of white gene in melon fly, Zeugodacus cucurbitae (Coquillett) (Diptera: Tephritidae) produced white eye phenotype. Arch Insect Biochem Physiol 2023; 114:e22059. [PMID: 37844014 DOI: 10.1002/arch.22059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2023] [Revised: 09/06/2023] [Accepted: 10/09/2023] [Indexed: 10/18/2023]
Abstract
Melon fly, Zeugodacus cucurbitae (Coquillett) is a major pest of cucurbitaceous crops, and causes substantial yield losses and economic costs. CRISPR/Cas9 is a rapid and effective site-specific genome editing tool for the generation of genetic changes that are stable and heritable. The CRISPR/Cas9 tool uses synthetically designed single guide RNA (sgRNA) that is complementary to the target gene and guides the Cas9 enzyme to perform nuclease activity by making double-strand breaks in the target DNA sequences. This tool can be effectively exploited to improve traits critical for the management of insect pests by targeting specific genes encoding these traits without the need of extensive genetic information. The white gene is an important gene responsible for the transport of body pigment precursor molecules. In this study, we produced effective mutagenesis of the white gene of Z. cucurbitae using the CRISPR/Cas9 tool with double sgRNA to target multiple sites of white to increase the efficiency in the generation of frame-shift mutations resulting in the white eye phenotype in adults. This was achieved through embryonic microinjection of the ribonucleoprotein (RNP) complex in the pre-blastoderm embryo stage 1 h after embryo laying. Our success with the production of a white eye mutant fly by CRISPR/Cas9 mutagenesis is important for the research on gene function and protein-level modifications in melon fly and forms the basis for the development of new genetic control strategies such as precision guided sterile insect technique (pgSIT) for this pest of economic significance.
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Affiliation(s)
- Sanjay Kumar Pradhan
- Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India
- Department of Agricultural Entomology, University of Agricultural Sciences, Bengaluru, India
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - Ashok Karuppannasamy
- Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India
- Department of Agricultural Entomology, Tamil Nadu Agricultural University, Coimbatore, India
| | - Parvathy Madhusoodanan Sujatha
- Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India
- Department of Plant Biotechnology, University of Agricultural Sciences, Bengaluru, India
| | - Bhargava Chikmagalur Nagaraja
- Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India
- Department of Agricultural Entomology, University of Agricultural Sciences, Bengaluru, India
| | - Anu Cholenahalli Narayanappa
- Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India
- Department of Agricultural Entomology, University of Agricultural Sciences, Bengaluru, India
| | - Pradeep Chalapathi
- Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India
- Department of Plant Biotechnology, University of Agricultural Sciences, Bengaluru, India
| | - Yogi Dhawane
- Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India
| | - Shivanna Bynakal
- Department of Agricultural Entomology, University of Agricultural Sciences, Bengaluru, India
| | - Markus Riegler
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - Manamohan Maligeppagol
- Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India
| | - Asokan Ramasamy
- Division of Basic Sciences, ICAR-Indian Institute of Horticultural Research, Bengaluru, India
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Chikmagalur Nagaraja B, Karuppannasamy A, Ramasamy A, Cholenahalli Narayanappa A, Chalapathi P, Maligeppagol M. CRISPR/Cas9-mediated mutagenesis of Sex lethal (Sxl) gene impacts fertility of the Fall armyworm, Spodoptera frugiperda (J. E. Smith) (Lepidoptera: Noctuidae). Arch Insect Biochem Physiol 2023; 114:1-15. [PMID: 37452759 DOI: 10.1002/arch.22035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2023] [Revised: 06/27/2023] [Accepted: 07/05/2023] [Indexed: 07/18/2023]
Abstract
Identification of novel approaches for managing the global pest, the Fall armyworm, Spodoptera frugiperda, is the need of the hour, as it defies many management strategies including synthetic chemicals, Bt transgenics, and so on. Recently CRISPR/Cas9-based genome editing opened up newer avenues to design novel pest management strategies such as precision-guided sterile insect technique (pgSIT). In this regard, genes governing sex determination, egg reproduction, and spermatogenesis could be the prime targets for genome editing. This requires validation of the target genes, preferably by a nontransgenic DNA-free editing, before the final application. One such important gene regulating sex determination in Drosophila is the Sex lethal (Sxl). However, the function of Sxl is not highly conserved in other insects and, in particular, we are beginning to comprehend its role in Lepidoptera with only one reference available in Spodoptera litura till date. In the present study, we have edited the sxl gene of S. frugiperda through the delivery of ribonucleoprotein complex (sgRNA + Cas9) at G0 stage embryo, targeting the conserved region of all the documented five splice variants. Results clearly showed that editing of sxl gene impacted the overall fecundity and hatching rate. Therefore, Sxl could be one of the target genes for developing pgSIT approach for the management of S. frugiperda.
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Affiliation(s)
- Bhargava Chikmagalur Nagaraja
- Division of Basic Sciences, ICAR - Indian Institute of Horticultural Research, Bengaluru, Karnataka, India
- Department of Agricultural Entomology, University of Agricultural Sciences, Bengaluru, Karnataka, India
| | - Ashok Karuppannasamy
- Division of Basic Sciences, ICAR - Indian Institute of Horticultural Research, Bengaluru, Karnataka, India
- Department of Agricultural Entomology, Tamil Nadu Agricultural University, Coimbatore, Tamil Nadu, India
| | - Asokan Ramasamy
- Division of Basic Sciences, ICAR - Indian Institute of Horticultural Research, Bengaluru, Karnataka, India
| | - Anu Cholenahalli Narayanappa
- Division of Basic Sciences, ICAR - Indian Institute of Horticultural Research, Bengaluru, Karnataka, India
- Department of Agricultural Entomology, University of Agricultural Sciences, Bengaluru, Karnataka, India
| | - Pradeep Chalapathi
- Division of Basic Sciences, ICAR - Indian Institute of Horticultural Research, Bengaluru, Karnataka, India
- Department of Agricultural Entomology, University of Agricultural Sciences, Bengaluru, Karnataka, India
| | - Manamohan Maligeppagol
- Division of Basic Sciences, ICAR - Indian Institute of Horticultural Research, Bengaluru, Karnataka, India
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Kumar CNP, Somashekar RK, Nagaraja BC, Shivaprasad D. Pollination ecology and reproductive biology of Canarium strictum Roxb. from evergreen forests of Central Western Ghats, India. J Environ Biol 2015; 36:1131-1136. [PMID: 26521556] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Pollination and reproductive biology of a dioecious tree Canarium strictum Roxb. (Burseraceae) was extensively studied within the Agumbe forest range of Western Ghats, Karnataka to identify primary pollen vectors and to enumerate interrelationship with the pollinators. The study also investigated phenology, floral biology, pollen production, pollen viability, stigma receptivity and nectar production. Trees produced functionally unisexual flowers with white petals, organized densely on inflorescences. Staminate flowers produced high percentage of viable pollen and relatively abundant nectar (15.75 μl) as a reward to the pollinators, while pistillate flowers produced only nectar (12 μl). Successful fruit set with wind pollination was facilitated by synchronization of flowering male and female trees, long term receptivity of stigma in female flowers and extended lifespan of flowers. The highest mean percent of fruit set with hand cross-pollination (μ = 91.06) suggests the influence of local male tree density, as well as, frequency and abundance of pollinator community on fruit set by open pollination.
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Sunil C, Somashekar RK, Nagaraja BC. Riparian vegetation assessment of Cauvery River Basin of South India. Environ Monit Assess 2010; 170:545-53. [PMID: 20024615 DOI: 10.1007/s10661-009-1256-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2009] [Accepted: 12/02/2009] [Indexed: 05/24/2023]
Abstract
The Cauvery river basin of South India has a large phyto-floristic wealth, rightfully enough to constitute a separate phyto-geographic unit. Increase in the anthropogenic pressures within the river basin and surrounding landscapes have persistently stressed the riparian ecosystem structure adversely, besides altering its composition. The objective of this study was to examine the present status of riparian vegetation along the Cauvery river basin, in response to anthropogenic pressures. For vegetation analysis, the riparian forest coming in the middle stretch of Cauvery river was categorized into two zones, viz., forest zone covering ~54 km stretch and agroecosystem zone covering ~80 km stretch. In each zone, tree species were quantified using transects at 8-km interval. Overall tree species accounting for both forest and agroecosystem were recorded and compared. The results indicate that the mean density and basal area of trees per plot were higher in the forest zone than agroecosystem zone. The Shannon-Weiner diversity of forest zone is 4.6, which is higher than agroecosystem. In addition, species composition indicated a relatively low or poor similarity between the two zones. The vegetation density and site disturbance scores for all the study sites reveals that sand mining and grazing areas have exerted negative impact on riparian forest. The results of the present study clearly brought out the need for preparing and implementing site-specific conservation plans for riparian ecosystem.
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Affiliation(s)
- C Sunil
- Department of Environmental Science, Bangalore University, Bangalore, 560056, India.
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Nagaraja BC, Somashekar RK, Raj MB. Tree species diversity and composition in logged and unlogged rainforest of Kudremukh National Park, South India. J Environ Biol 2005; 26:627-34. [PMID: 16459548] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
Species composition and diversity in logged and unlogged forests were assesed to understand the regeneration of the residual stand twenty years after logging in Kudremukh National Park, South India. Relative density, frequency and basal area were measured by Point Centered Quarter method to calculate the diversity and stand quality. The logged forest harbored lower stem density of mature trees (508 ha(-1)) than unlogged ones (630 ha(-1)). Indeed, logging operations increased the species diversity in the regenerative phase (seedling phase) due to the creation of larger canopy gaps. The extra radiation reaching the ground, facilitated the colonization of early and late secondary species. Ramakrishanan Index of Stand Quality (RISQ) values in logged forest was higher in comparison with unlogged forest, indicating the dominance of early and late secondary species, especially at sapling phase. The light demanding secondary forest species contribute higher percentage to the overall tree population in logged forest. It is observed from the study that a sufficient period of felling cycle should be practiced to reinstate the same set of species prevailed before logging.
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Affiliation(s)
- B C Nagaraja
- Department of Environmental Sciences, Bangalore University, Bangalore-560 056, India
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