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Moussa M, Cauvin E, Le Piouffle A, Lucas O, Bidault A, Paillard C, Benoit F, Thuillier B, Treilles M, Travers MA, Garcia C. A MALDI-TOF MS database for fast identification of Vibrio spp. potentially pathogenic to marine mollusks. Appl Microbiol Biotechnol 2021; 105:2527-2539. [PMID: 33590268 PMCID: PMC7954726 DOI: 10.1007/s00253-021-11141-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Revised: 01/15/2021] [Accepted: 01/25/2021] [Indexed: 02/05/2023]
Abstract
In mollusk aquaculture, a large number of Vibrio species are considered major pathogens. Conventional methods based on DNA amplification and sequencing used to accurately identify Vibrio species are unsuitable for monitoring programs because they are time-consuming and expensive. The aim of this study was, therefore, to develop the MALDI-TOF MS method in order to establish a rapid identification technique for a large panel of Vibrio species. We created the EnviBase containing 120 main spectra projections (MSP) of the Vibrio species that are potentially responsible for mollusk diseases, comprising 25 species: V. aestuarianus, V. cortegadensis, V. tapetis and species belonging to the Coralliilyticus, Harveyi, Mediterranei, and Orientalis clades. Each MSP was constructed by the merger of raw spectra obtained from three different media and generated by three collaborating laboratories to increase the diversity of the conditions and thus obtain a good technique robustness. Perfect discrimination was obtained with all of the MSP created for the Vibrio species and even for very closely related species as V. europaeus and V. bivalvicida. The new EnviBase library was validated through a blind test on 100 Vibrio strains performed by our three collaborators who used the direct transfer and protein extraction methods. The majority of the Vibrio strains were successfully identified with the newly created EnviBase by the three laboratories for both protocol methods. This study documents the first development of a freely accessible database exclusively devoted to Vibrio found in marine environments, taking into account the high diversity of this genus. KEY POINTS: • Development of a MALDI-TOF MS database to quickly affiliate Vibrio species. • Increase of the reactivity when faced with Vibrio associated with mollusk diseases. • Validation of MALDI-TOF MS as routine diagnostic tool.
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Affiliation(s)
- M Moussa
- Ifremer, SG2M-LGPMM, Laboratoire de Génétique et Pathologie des Mollusques Marins, F-17390, La Tremblade, France
| | - E Cauvin
- Labeo-Manche, 1352 avenue de Paris, 50000, Saint-Lô, France
| | - A Le Piouffle
- Labocea, Avenue de la Plage des Gueux, 29330, Quimper, France
| | - O Lucas
- Qualyse, ZI Montplaisir, 79220, Champdeniers Saint-Denis, France
| | - A Bidault
- Univ Brest, CNRS, IRD, Ifremer, UMR6539 LEMAR, F-29280, Plouzané, France
| | - C Paillard
- Univ Brest, CNRS, IRD, Ifremer, UMR6539 LEMAR, F-29280, Plouzané, France
| | - F Benoit
- Labeo-Manche, 1352 avenue de Paris, 50000, Saint-Lô, France
| | - B Thuillier
- Labocea, Avenue de la Plage des Gueux, 29330, Quimper, France
| | - M Treilles
- Qualyse, ZI Montplaisir, 79220, Champdeniers Saint-Denis, France
| | - M A Travers
- Ifremer, SG2M-LGPMM, Laboratoire de Génétique et Pathologie des Mollusques Marins, F-17390, La Tremblade, France
- IHPE, Univ. Montpellier, CNRS, Ifremer, Univ. Perpignan Via Domitia, F-34090, Montpellier, France
| | - Céline Garcia
- Ifremer, SG2M-LGPMM, Laboratoire de Génétique et Pathologie des Mollusques Marins, F-17390, La Tremblade, France.
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Benzimra C, Couturier L, Gatel L, Cauvin E, Gory G, Rault D. Ultrasonographic findings associated with uterine migrating grass seeds in eleven dogs. VLAAMS DIERGEN TIJDS 2021. [DOI: 10.21825/vdt.v90i1.17767] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Numerous locations have been reported for vegetal foreign body migration. However, urogenital migration has rarely been documented. In this retrospective study, the ultrasonographic features associated with intrauterine migrating vegetal foreign bodies (grass seeds) are described in one intact and ten ovariectomized bitches. The most common ultrasonographic finding was focal and mild ampullary dilation of the uterus, containing the foreign body outlined by scant intraluminal fluid. There were no changes seen to the uterine wall, except in one dog with uterine perforation, confirmed at surgery. The remainder of the uterus had a normal appearance in 8/11 dogs, while there was a small amount of intraluminal fluid in 2/11 cases. Mild, focal steatitis around the focal dilation of the uterus segment containing the foreign body was observed in one case. The subtlety of these findings suggests that the ultrasonographic diagnosis of uterine grass awns can be challenging. This underlines a discrepancy with other reported migration sites commonly associated with marked inflammation.
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Fritz J, Mahinc M, Rannou B, Cauvin E. Medical management of Echinococcus multilocularis infection mimicking a locally aggressive cavitary tumor with pulmonary metastases in a dog. VLAAMS DIERGEN TIJDS 2019. [DOI: 10.21825/vdt.v88i4.16012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A two-year-old Labrador retriever living in the French Alps was presented with abdominal distension, lethargy and weight loss but no other specific clinical signs. CT examination revealed a large, cavitary liver mass invading the caudal vena cava, associated with multiple hepatic lesions of similar appearance, lymphadenopathy and pulmonary nodules. The condition was initially mistaken for a malignant neoplasm. However, cytologic and histologic examinations of the largest liver mass were consistent with cestodiasis and PCR testing confirmed infection with Echinococcus multilocularis. Medical treatment with albendazole was initiated. The dog remained clinically well for ten months following the diagnosis, but had to be euthanized because the owners had to return to Great-Britain and the dog could not be legally imported. To the authors’ knowledge, this is the first case report, in which long-term follow-up of Echinococcus sp. infection in a dog, managed medically, is described. This case also shows that medical management may be a viable option in case surgery is not feasible.
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Gory G, Couturier J, Cauvin E, Fournel-Fleury C, Couturier L, Rault DN. Nervous system lymphoma with sciatic nerve involvement in two cats diagnosed using computed tomography and ultrasound guided fine needle aspiration. VLAAMS DIERGEN TIJDS 2014. [DOI: 10.21825/vdt.v83i3.16649] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Two cats were presented with a recent history of difficulty in walking and jumping. Neurological examination was consistent with a lumbosacral or a sciatic nerve lesion in both cases with an additional C6-T2 spinal cord segment lesion in case 2. Differential diagnosis included neoplastic, inflammatory/infectious (neuritis, meningomyelitis, discospondylitis) and compressive disc disease. Computed tomography (CT) revealed an enlarged, contrast enhancing sciatic nerve from the L7-S1 intervertebral foramen, to the distal third portion of the femoral shaft. In case 2, CT also revealed an enlarged femoral nerve and an extradural mass causing mild compression of the spinal cord at T1-2 and T3-4. Ultrasonography allowed to perform fine needle aspiration of the affected sciatic nerve. Cytology was highly suggestive of indolent, small cell lymphoma in case 1, and confirmed a high-grade lymphoma in case 2, both belonging to the large granular lymphoma subtype.
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Abstract
An investigation was undertaken with the aim of studying the repetitive region of the MUC1 gene and analyzing its polymorphisms in some Italian sheep breeds. Two primers previously used for the goat MUC1 gene analyses allowed for the amplification of 4 different alleles. The sequence analysis showed that the repetitive region of the sheep MUC1 gene is an array of 60-bp repeats, in accordance with the information reported in humans, cattle, and goats. The polypeptide sequence encoded by the consensus repeat was very similar to the corresponding sequences of goats and cattle. The average homology of all repeated units was 82%; when the repeats were compared with the derived consensus repeat, homology dropped to 78%. The repeats were not all perfectly conserved, but the sequence homology was nevertheless clearly sufficient to preserve the mechanism giving rise to the variable-number tandem-repeat polymorphism. In spite of their reduced sequence homology, the sheep repeats shared a high number of potential glycosylation sites. The conservation of the exact number and position of glycosylation sites did not seem to be very important for the purpose of functional integrity, but glycosylation appeared to be conserved as a bulk property. Analysis of the polymorphism in 6 Italian breeds showed that the sheep repetitive region seemed to be less variable and smaller in size than the repetitive region of the goat. The findings of this study suggest that ruminants can be a useful model to study the mechanisms by which the variation in the repeat number and the extracellular domain size can modulate the effectiveness of MUC1 as a cell-surface shield.
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Affiliation(s)
- R Rasero
- Dipartimento di Produzioni Animali, Epidemiologia ed Ecologia, University of Torino, Grugliasco 10095, Italy.
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Affiliation(s)
- D Forresu
- Département Hippique, Ecole Nationale Vétérinaire de Lyon, 1 Avenue Bourgelat, F-69280 Marcy l'Etoile, France
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Affiliation(s)
- B Carstanjen
- Département Hippique, Ecole Nationale Vétérinaire de Lyon, 1 avenue Bourgelat, 69280 Marcy l'Etoile, France
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Abstract
The aim of this work was to investigate the genetic structure of the casein gene cluster in 5 Italian goat breeds and to evaluate the haplotype variability within and among populations. A total of 430 goats from Vallesana, Roccaverano, Jonica, Garganica, and Maltese breeds were genotyped at alphas1-casein (CSN1S1), alphas2-casein, (CSN1S2), beta-casein (CSN2), and kappa-casein (CSN3) loci using several genomic techniques and milk protein analysis. Casein haplotype frequencies were estimated for each breed. Principal component analysis was carried out to highlight the relationship among breeds. Allele and haplotype distributions indicated considerable differences among breeds. The haplotype CSN1S1*F- CSN1S2*F-CSN3*D occurred in all breeds with frequencies >0.100 and was the most common haplotype in the Southern breeds. A high frequency of CSN1S1*0-CSN1S2*C-CSN3*A haplotype was found in Vallesana population (0.162). Principal component analysis clearly separated the Northern and Southern breeds by the first component. The variability of the caprine casein loci and variety of resulting haplotypes should be exploited in the future using specific breeding programs aiming to preserve biodiversity and to select goat genetic lines for specific protein production.
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Affiliation(s)
- P Sacchi
- Dipartimento di Produzioni Animali, Epidemiologia ed Ecologia, via Leonardo da Vinci 44, 10095 Grugliasco, Torino, Italy
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Sartore S, Sacchi P, Maione S, Soglia D, Cauvin E, Rasero R. Polymorphism of Genetic variability of gene in sheep. Italian Journal of Animal Science 2005. [DOI: 10.4081/ijas.2005.2s.67] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Abstract
The objective of our study was to demonstrate the existence of a repetitive region in the goat MUC1 gene and to develop a polymerase chain reaction (PCR) protocol to analyze its polymorphism in different breeds. Using 2 primers derived from the bovine MUC1 sequence, a PCR fragment was obtained and cloned. The sequence analysis shows that the repetitive region of goat MUC1 is an array of 60 bp repeats in accordance with the data reported for other species. The polypeptide sequences encoded by the consensus repeats of goat and bovine were exactly alike. A PCR protocol to improve the detection of goat MUC1 polymorphism was developed, and a total of 178 animals from 6 Italian breeds were analyzed. Fifteen different alleles, ranging in size from 1500 to 3000 bp, were found. The high number of alleles observed shows that the goat MUC1 is a hypervariable gene. These results are the basis for further investigations on the possible role of MUC1 polymorphism in the genetic control of disease susceptibility and production traits in the goat species.
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Affiliation(s)
- P Sacchi
- Dipartimento di Produzioni Animali, Epidemiologia ed Ecologia, University of Torino, Grugliasco 10095, Italy.
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Abstract
The clinical, radiographic and ultrasonographic findings in a case of a comminuted articular fracture of the accessory carpal bone of a thoroughbred chaser are described, and its surgical treatment and aftercare are detailed. The horse made an uneventful recovery and successfully returned to racing.
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Affiliation(s)
- G A Munroe
- Department of Veterinary Clinical Studies, Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Roslin, Midlothian
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Liberatori J, Ambrosino C, Cauvin E. C-terminal amino acid sequence of buffalo beta-lactoglobulin. Ric Sci 1968; 38:493-4. [PMID: 5761102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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Ambrosino C, Liberatori J, Cauvin E, Ubertalle A. [Amino acids in cheeses prepared with cow's milk and ewe's milk]. Ric Sci 1967; 37:869-72. [PMID: 5606142] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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