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Douëllou T, Delannoy S, Ganet S, Fach P, Loukiadis E, Montel MC, Sergentet-Thevenot D. Molecular characterization of O157:H7, O26:H11 and O103:H2 Shiga toxin-producing Escherichia coli isolated from dairy products. Int J Food Microbiol 2017; 253:59-65. [PMID: 28499121 DOI: 10.1016/j.ijfoodmicro.2017.04.010] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2016] [Revised: 04/18/2017] [Accepted: 04/19/2017] [Indexed: 01/10/2023]
Abstract
Pathogenic Shiga toxin-producing E. coli (STEC) are recognized worldwide as environment and foodborne pathogens which can be transmitted by ingestion of ready-to-eat food such as raw milk-derived products. STEC show a prevalence rate in dairy products of 0.9%, yet comparably few outbreaks have been related to dairy products consumption. In this study, we used rt-qPCR to identify the virulence potential of O157, O26 and O103 STEC strains isolated from raw-milk dairy products by analyzing virulence-related gene frequencies and associations with O-island (OI) 44, OI-48, OI-50, OI-57, OI-71 and OI-122. Results showed that 100% of STEC strains investigated harbored genes associated with EHEC-related virulence profile patterns (eae and stx, with either espK, espV, ureD and/or Z2098). We also found similarities in virulence-related gene content between O157:H7 and O103:H2 dairy and non-dairy STEC strains, especially isolates from human cases. The O26:H11-serotype STEC strains investigated harbor the arcA-allele 2 gene associated with specific genetic markers. These profiles are associated with high-virulence seropathotype-A STEC. However, the low frequency of stx2 gene associated with absence of other virulence genes in dairy isolates of O26:H11 remains a promising avenue of investigation to estimate their real pathogenicity. All O26:H11 attaching-effacing E. coli (AEEC) strains carried CRISPRO26:H11SP_O26_E but not genetic markers espK, espV, ureD and/or Z2098 associated with the emerging potentially high-virulence "new French clone". These strains are potentially as "EHEC-like" strains because they may acquire (or have lost) stx gene. In this study, O157:H7, O103:H2 and O26:H11 STEC strains isolated from dairy products were assigned as potential pathogens. However, research now needs to investigate the impact of dairy product environment and dairy processing on the expression of their pathogenicity.
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Affiliation(s)
- T Douëllou
- Institute National de Recherche Agronomique, Unité de Recherches Fromagères, 15000 Aurillac, France; Université de Lyon, Research Group "Bacterial Opportunistic Pathogens and Environment", UMR5557 Ecologie Microbienne Lyon, Université Lyon 1, CNRS, VetAgro Sup, 69280 Marcy l'Etoile, France.
| | - S Delannoy
- Université Paris-Est, ANSES, Laboratoire de Sécurité des Aliments, Plateforme IdentyPath, 14 rue Pierre et Marie Curie, 94701 Maisons-Alfort, France
| | - S Ganet
- Université de Lyon, Research Group "Bacterial Opportunistic Pathogens and Environment", UMR5557 Ecologie Microbienne Lyon, Université Lyon 1, CNRS, VetAgro Sup, 69280 Marcy l'Etoile, France; Université de Lyon, VetAgro Sup Campus Vétérinaire, Laboratoire d'Etudes des Microorganismes Alimentaires Pathogènes-French National Reference laboratory for Escherichia coli including Shiga toxin-producing E. coli (NRL-STEC), 69280 Marcy l'Etoile, France
| | - P Fach
- Université Paris-Est, ANSES, Laboratoire de Sécurité des Aliments, Plateforme IdentyPath, 14 rue Pierre et Marie Curie, 94701 Maisons-Alfort, France
| | - E Loukiadis
- Université de Lyon, Research Group "Bacterial Opportunistic Pathogens and Environment", UMR5557 Ecologie Microbienne Lyon, Université Lyon 1, CNRS, VetAgro Sup, 69280 Marcy l'Etoile, France; Université de Lyon, VetAgro Sup Campus Vétérinaire, Laboratoire d'Etudes des Microorganismes Alimentaires Pathogènes-French National Reference laboratory for Escherichia coli including Shiga toxin-producing E. coli (NRL-STEC), 69280 Marcy l'Etoile, France
| | - M-C Montel
- Institute National de Recherche Agronomique, Unité de Recherches Fromagères, 15000 Aurillac, France
| | - D Sergentet-Thevenot
- Université de Lyon, Research Group "Bacterial Opportunistic Pathogens and Environment", UMR5557 Ecologie Microbienne Lyon, Université Lyon 1, CNRS, VetAgro Sup, 69280 Marcy l'Etoile, France; Université de Lyon, VetAgro Sup Campus Vétérinaire, Laboratoire d'Etudes des Microorganismes Alimentaires Pathogènes-French National Reference laboratory for Escherichia coli including Shiga toxin-producing E. coli (NRL-STEC), 69280 Marcy l'Etoile, France
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Douëllou T, Delannoy S, Ganet S, Mariani-Kurkdjian P, Fach P, Loukiadis E, Montel M, Thevenot-Sergentet D. Shiga toxin-producing Escherichia coli strains isolated from dairy products - Genetic diversity and virulence gene profiles. Int J Food Microbiol 2016; 232:52-62. [PMID: 27257743 DOI: 10.1016/j.ijfoodmicro.2016.04.032] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2015] [Revised: 04/27/2016] [Accepted: 04/29/2016] [Indexed: 01/01/2023]
Abstract
Shiga toxin-producing Escherichia coli (STEC) are widely recognized as pathogens causing food borne disease. Here we evaluate the genetic diversity of 197 strains, mainly STEC, from serotypes O157:H7, O26:H11, O103:H2, O111:H8 and O145:28 and compared strains recovered in dairy products against strains from human, meat and environment cases. For this purpose, we characterized a set of reference-collection STEC isolates from dairy products by PFGE DNA fingerprinting and a subset of these by virulence-gene profiling. PFGE profiles of restricted STEC total DNA showed high genomic variability (0.9976 on Simpson's discriminatory index), enabling all dairy isolates to be differentiated. High-throughput real-time PCR screening of STEC virulence genes were applied on the O157:H7 and O26:H11 STEC isolates from dairy products and human cases. The virulence gene profiles of dairy and human STEC strains were similar. Nevertheless, frequency-wise, stx1 was more prevalent among dairy O26:H11 isolates than in human cases ones (87% vs. 44%) while stx2 was more prevalent among O26:H11 human isolates (23% vs. 81%). For O157:H7 isolates, stx1 (0% vs. 39%), nleF (40% vs 94%) and Z6065 (40% vs 100%) were more prevalent among human than dairy strains. Our data point to differences between human and dairy strains but these differences were not sufficient to associate PFGE and virulence gene profiles to a putative lower pathogenicity of dairy strains based on their lower incidence in disease. Further comparison of whole-genome expression and virulence gene profiles should be investigated in cheese and intestinal tract samples.
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Affiliation(s)
- T Douëllou
- INRA UR Fromagères 545, 20 Cote de Reyne, 15000 Aurillac, France; Université de Lyon, "Bacterial Opportunistic Pathogens and Environment" Research Group, UMR5557 Ecologie Microbienne Lyon, Université Lyon 1, CNRS, VetAgro Sup, 69280 Marcy l'Etoile, France
| | - S Delannoy
- Université Paris-Est, ANSES, Laboratoire de Sécurité des Aliments, Plateforme IdentyPath, 14 rue Pierre et Marie Curie, 94701 Maisons-Alfort, France
| | - S Ganet
- Université de Lyon, "Bacterial Opportunistic Pathogens and Environment" Research Group, UMR5557 Ecologie Microbienne Lyon, Université Lyon 1, CNRS, VetAgro Sup, 69280 Marcy l'Etoile, France; Université de Lyon, VetAgro Sup Campus Vétérinaire, Laboratoire d'études des Microorganismes Alimentaires Pathogènes, French National Reference Laboratory for Escherichia coli including Shiga-like toxin-producing E. coli (NRL-STEC), 69280 Marcy-l'Etoile, France
| | - P Mariani-Kurkdjian
- Centre National de Référence Associé des Escherichia coli, AP-HP, Service de Microbiologie, Hôpital Robert-Debré, 75019 Paris, France
| | - P Fach
- Université Paris-Est, ANSES, Laboratoire de Sécurité des Aliments, Plateforme IdentyPath, 14 rue Pierre et Marie Curie, 94701 Maisons-Alfort, France
| | - E Loukiadis
- Université de Lyon, "Bacterial Opportunistic Pathogens and Environment" Research Group, UMR5557 Ecologie Microbienne Lyon, Université Lyon 1, CNRS, VetAgro Sup, 69280 Marcy l'Etoile, France; Université de Lyon, VetAgro Sup Campus Vétérinaire, Laboratoire d'études des Microorganismes Alimentaires Pathogènes, French National Reference Laboratory for Escherichia coli including Shiga-like toxin-producing E. coli (NRL-STEC), 69280 Marcy-l'Etoile, France
| | - Mc Montel
- INRA UR Fromagères 545, 20 Cote de Reyne, 15000 Aurillac, France
| | - D Thevenot-Sergentet
- Université de Lyon, "Bacterial Opportunistic Pathogens and Environment" Research Group, UMR5557 Ecologie Microbienne Lyon, Université Lyon 1, CNRS, VetAgro Sup, 69280 Marcy l'Etoile, France; Université de Lyon, VetAgro Sup Campus Vétérinaire, Laboratoire d'études des Microorganismes Alimentaires Pathogènes, French National Reference Laboratory for Escherichia coli including Shiga-like toxin-producing E. coli (NRL-STEC), 69280 Marcy-l'Etoile, France.
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King L, Loukiadis E, Mariani-Kurkdjian P, Haeghebaert S, Weill FX, Baliere C, Ganet S, Gouali M, Vaillant V, Pihier N, Callon H, Novo R, Gaillot O, Thevenot-Sergentet D, Bingen E, Chaud P, de Valk H. Foodborne transmission of sorbitol-fermenting Escherichia coli O157:[H7] via ground beef: an outbreak in northern France, 2011. Clin Microbiol Infect 2014; 20:O1136-44. [DOI: 10.1111/1469-0691.12736] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2014] [Revised: 06/17/2014] [Accepted: 06/17/2014] [Indexed: 10/25/2022]
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Charron M, Loukiadis E, Mariani-Kurkdjian P, Gouali M, Poignet-Leroux B, Barret AS. Utilité des cartes de fidélité dans l’investigation d’une épidémie d’infections à Escherichia coli O157:H7. Rev Epidemiol Sante Publique 2013. [DOI: 10.1016/j.respe.2013.07.677] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022] Open
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Barret AS, Charron M, Mariani-Kurkdjian P, Gouali M, Loukiadis E, Poignet-Leroux B, Godron A, Gault G, Faure M, Mailles A. Shopper cards data and storage practices for the investigation of an outbreak of Shiga-toxin producing Escherichia coli O157 infections. Med Mal Infect 2013; 43:368-73. [PMID: 23910937 DOI: 10.1016/j.medmal.2013.05.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2013] [Revised: 03/18/2013] [Accepted: 05/24/2013] [Indexed: 11/30/2022]
Abstract
INTRODUCTION An outbreak of shiga-toxin producing Escherichia coli infections occurred in southwest France in June 2012. The outbreak was investigated to identify the source of infection, and guide control measures. METHODS Confirmed outbreak cases were patients who developed bloody diarrhoea or haemolytic uremic syndrome (HUS) between 28 May and 6 July 2012, with E. coli O157 isolates showing indistinguishable patterns on pulse field gel electrophoresis (PFGE). A standardized questionnaire was administered to patients to document food consumption and other risk exposures. Their purchase was checked through their supermarket shopper card data. RESULTS Six patients (four with HUS and two with bloody diarrhea) were confirmed outbreak cases. Fresh ground beef burgers from one supermarket were the only common food exposure, identified by interviews and shopper card data. The PFGE profile of shiga toxin-producing E. coli O157 isolated from the suspected beef burgers was identical to those from the human cases. The suspected beef burgers were no longer on sale at the time of investigation but three patients confirmed as outbreak cases had deep-frozen some at home. CONCLUSION Shopper card data was particularly useful to obtain precise and reliable information on the traceability of consumed food. Despite the expired use-by date, a recall was issued for the beef burgers. This contributed to preventing other cases among consumers who had deep-frozen the beef burgers.
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Affiliation(s)
- A-S Barret
- Institut de veille sanitaire, département des maladies infectieuses, 12, rue du Val-d'Osne, 94415 Saint-Maurice cedex, France.
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Haeghebaert S, Chaud P, Billaut C, Mariani P, Weill FX, Loukiadis E, Pihier N, King L. Épidémie d’infections à Escherichia coli producteurs de shiga-toxines (STEC). Rev Epidemiol Sante Publique 2012. [DOI: 10.1016/j.respe.2012.06.283] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Madic J, de Garam CP, Brugère H, Loukiadis E, Fach P, Jamet E, Auvray F. Duplex real-time PCR detection of type III effector tccP and tccP2 genes in pathogenic Escherichia coli and prevalence in raw milk cheeses. Lett Appl Microbiol 2011; 52:538-45. [DOI: 10.1111/j.1472-765x.2011.03038.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Loukiadis E, Kerouredan M, Oswald E, Brugere H. Virulence Factors of Enterohemorrhagic Escherichia Coli (EHEC) in Sewage of French Slaughterhouses and Environmental Risk for Public Health. Epidemiology 2006. [DOI: 10.1097/00001648-200611001-00608] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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