Screening for Abiotic Stress Response in Rice

Rice (Oryza sativa L.) is the staple food for over half of the world population. However, most rice varieties are severely injured by abiotic stresses, with strong social and economic impacts. Understanding rice responses to stress may guide breeding for more tolerant varieties. However, the lack of consistency in the design of the stress experiments described in the literature limits comparative studies and output assessments. The use of identical setups is the only way to generate comparable data. This chapter comprises three sections, describing the experimental conditions established at the Genomics of Plant Stress (GPlantS) unit of ITQB NOVA to assess the response of rice plants to different abiotic stresses-high salinity, cold, drought, simulated drought, and submergence-and their recovery capacity when intended. All sections include a detailed description of the materials and methodology and useful notes gathered from our team experience. We use seedlings since rice plants at this stage show high sensitivity to abiotic stresses. For the salt, cold, and simulated drought (PEG, polyethylene glycol) stress assays, we grow rice seedlings in a hydroponic system, while for the drought assay, plants are grown in soil and subjected to water withholding. For submergence, we use water-filled Magenta boxes. All setups enable visual score determination and are suitable for sample collection during stress imposition and also recovery. The proposed methodologies are affordable and straightforward to implement in most labs, allowing the discrimination of several rice genotypes at the molecular and phenotypic levels.

Predicting tearing paths in thin sheets

This study investigates the tearing of a thin notched sheet when two points on the sheet are pulled apart. The concepts that determine the crack trajectory are reviewed in the general anisotropic case, in which the energy of the fracture depends on the fracture direction. When observed as a flat sheet a purely geometric "tearing vector" is defined through the location of the crack tip and the pulling points. Both Griffiths's criterion and the maximum energy release rate criterion (MERR) predict a fracture path that is parallel to the tearing vector in the isotropic case. However, for the anisotropic case, the application of the MERR leads to a crack path that deviates from the tearing vector, following a propagation direction that tends to minimize the fracture energy. In the case of strong anisotropy, it is more difficult to obtain an analytical prediction of the tearing trajectory. Thus, simple geometrical arguments are provided to give a derivation of a differential equation accounting for crack trajectory, according to the natural coordinates of the pulling, and in the case that the anisotropy is sufficiently weak. The solution derived from this analysis is in good agreement with previous experimental observations.

Foam rheology at large deformation

Large deformations are prone to cause irreversible changes in materials structure, generally leading to either material hardening or softening. Aqueous foam is a metastable disordered structure of densely packed gas bubbles. We report on the mechanical response of a foam layer subjected to quasistatic periodic shear at large amplitude. We observe that, upon increasing shear, the shear stress follows a universal curve that is nearly exponential and tends to an asymptotic stress value interpreted as the critical yield stress at which the foam structure is completely remodeled. Relevant trends of the foam mechanical response to cycling are mathematically reproduced through a simple law accounting for the amount of plastic deformation upon increasing stress. This view provides a natural interpretation to stress hardening in foams, demonstrating that plastic effects are present in this material even for minute deformation.

Effects of tetrahydrohyperforin in mouse hippocampal slices: neuroprotection, long-term potentiation and TRPC channels

Tetrahydrohyperforin (IDN5706) is a semi-synthetic compound derived from hyperforin (IDN5522) and is the main active principle of St. John's Wort. IDN5706 has shown numerous beneficial effects when administered to wild-type and double transgenic (APPswe/PSEN1ΔE9) mice that model Alzheimer's disease. However, its mechanism of action is currently unknown. Toward this end, we analysed field excitatory postsynaptic potentials (fEPSPs) in mouse hippocampal slices incubated with IDN5706 and in the presence of the TRPC3/6/7 activator 1-oleoyl-2-acetyl-sn-glycerol (OAG), the TRPC channel blocker SKF96365, and neurotoxic amyloid β-protein (Aβ) oligomers. To study spatial memory, Morris water maze (MWM) behavioural tests were conducted on wild-type mice treated with IDN5706 and SKF96365. In silico studies were conducted to predict a potential pharmacophore. IDN5706 and OAG had a similar stimulating effect on fEPSPs, which was inhibited by SKF96365. IDN5706 protected from reduced fEPSPs induced by Aβ oligomers. IDN5706 improved spatial memory in wild-type mice, an effect that was counteracted by co-administration of SKF96365. Our in silico studies suggest strong pharmacophore similarity of IDN5706 and other reported TRPC6 activators (IDN5522, OAG and Hyp9). We propose that the effect of IDN5706 is mediated through activation of the TRPC3/6/7 channel subfamily. The unveiling of the drug's mechanism of action is a necessary step toward the clinical use of IDN5706 in Alzheimer's disease.

Elastic response and wrinkling onset of curved elastic membranes subjected to indentation test

Starting from a polymeric-fluid droplet, by vulcanization of the fluid free surface, curved elastic membranes, several nanometers thick and a few millimeters in diameter, which enclose a constant fluid volume, are produced. In an indentation-type test, carried out by pushing the membrane along its normal by means of a micro-needle, under some conditions, wrinkles are likely to appear around the contact region. Interestingly, we observe that the instability does not significantly alter the force-displacement relation: the relation between the force and the displacement remains linear and the associated stiffness is simply proportional to the tension of the membrane. In addition, we determine that the wrinkles develop when the stretching modulus of the membrane compares with its tension, which provides a useful method to estimate the elastic constant.

Significantly reduced expression of the proteoglycan decorin in Alzheimer's disease fibroblasts

Aims-To investigate whether proteoglycan synthesis is altered in skin fibroblasts in patients with Alzheimer's disease compared with normal subjects.Methods-Cell lines obtained from donors with Alzheimer's disease and healthy controls were incubated with radioactive sulphate. The proteoglycans synthesised were determined and analysed by chromatographic, sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) and glycosaminoglycans-lyase treatment. The amount of decorin synthesised by each cell line was quantified using western blot analysis. Transcripts for human decorin were determined using northern blot analysis.Results-No significant changes in total sulphate incorporation and glycos-aminoglycan (GAG) composition were detected in the incubation media of these cells. However, chromatographic and SDS-PAGE analysis of the proteoglycans secreted by the cell lines showed that a dermatan sulphate proteoglycan of 150-125 kilodaltons was substantially reduced in Alzheimer's disease fibroblasts. The molecular characteristics of this proteoglycan correspond to decorin. Western blot analysis indicated that decorin was reduced in Alzheimer's disease incubation medium compared with normal medium. Northern blotting indicated that in Alzheimer's disease fibroblasts decorin transcripts were significantly reduced compared with normal fibroblasts. Glypican concentrations, a cell surface heparan sulphate proteoglycan, remained the same.Conclusions-These results strongly suggest that the expression and synthesis of decorin is affected in Alzheimer's disease skin fibroblasts.

Ultrasound propagation in wet and airless non-consolidated granular materials

This paper deals with an experimental description of the acoustic behaviour of non-consolidated granular materials submitted to static force. The aim of this work is to investigate the effect of a small amount of an interstitial fluid on the acoustic propagation. Measurements of the velocity and of the transmission of the coherent wave are performed for different values of the applied force. It is shown that the behaviour of the speed of the ultrasonic coherent wave according to pressure have a slope close to the one of the Hertz-Mindlin's model in the case of a dry medium. When a small amount of a low viscosity fluid is added in a mono-disperse granular medium, the speed of the ultrasonic wave increases according to the power 1/6 to the force applied following the Hertz-Mindlin law (v approximately P(1/6)). Moreover, measurements of the velocity and of the transmission of the ultrasonic wave are strongly dependent on the nature of the interstitial fluid. In order to quantify its effect on the propagation, measurements are performed using various fluids having different characteristics. In a first step, silicon oils of different viscosities (from 50 x 10(-3) to 10 Pa s) are used, showing that with increasing viscosity, the wave velocity no longer varies according to the power law 1/6. The transmission coefficient also increases with the viscosity, showing a better propagation of the wave through the medium. Then, measurements are done in the vacuum allowing a comparison with ultrasonic propagation in presence of an interstitial fluid. This experiment shows a strong increase of the transmission coefficient while velocity remains the same as in the dry case. The study of scattered waves in vacuum shows also a significant increase in amplitude and duration of these typical waves. Then, different saturating inert gases are added to the medium showing that the propagation of the scattered wave is not influenced by their different characteristics.

Acoustic emission associated with the bursting of a gas bubble at the free surface of a non-Newtonian fluid

We report experimental measurements of the acoustic emission associated with the bursting of a gas bubble at the free surface of a non-Newtonian fluid. On account of the viscoelastic properties of the fluid, the bubble is generally elongated. The associated frequency and duration of the acoustic signal are discussed with regard to the shape of the bubble and successfully accounted for by a simple linear model. The acoustic energy exhibits a high sensitivity to the dynamics of the thin film bursting, which demonstrates that, in practice, it is barely possible to deduce from the acoustic measurements the total amount of energy released by the event. Our experimental findings provide clues for the understanding of the signals from either volcanoes or foams, where one observes respectively, the bursting of giant bubbles at the free surface of lava and bubble bursting avalanches.

Wrinkle formations in axi-symmetrically stretched membranes

We study experimentally the main features of wrinkles that form in an initially stretched and flat elastic membrane when subjected to an axi-symmetric traction force at the center. The wavelength and amplitude of the wrinkle pattern are accurately characterized as the membrane tension and the traction forced are varied. We show that wrinkles are the result of a supercritical instability and appear for a well-defined critical traction force that is a function of the membrane tension. Wrinkle length and amplitude increase as the traction force is increased further. By contrast, both quantities decrease as the membrane tension is increased. Calculations based on symmetry arguments and elastic-energy minimization are in good agreement with experiments and provide a simple way to investigate configurations that are difficult to access experimentally. Such problems include wrinkles in elastic nano-films on finite-thickness viscous substrates used in semiconductor technology or in cellular forces detection.

Normal-mode-vortex interactions

Standing surface waves that interact with a confined, vertical, vorticity field with zero net circulation are studied both analytically and experimentally. The surface waves are generated by vertical vibration, and constant vorticity injection is achieved by a rotating disk flush mounted in the cell. Experimental results are indicative of a local wave-vortex interaction (no dislocation), and a simple theoretical model is able to explain them in quantitative detail.

Comparative protein structure modeling of genes and genomes

Comparative modeling predicts the three-dimensional structure of a given protein sequence (target) based primarily on its alignment to one or more proteins of known structure (templates). The prediction process consists of fold assignment, target-template alignment, model building, and model evaluation. The number of protein sequences that can be modeled and the accuracy of the predictions are increasing steadily because of the growth in the number of known protein structures and because of the improvements in the modeling software. Further advances are necessary in recognizing weak sequence-structure similarities, aligning sequences with structures, modeling of rigid body shifts, distortions, loops and side chains, as well as detecting errors in a model. Despite these problems, it is currently possible to model with useful accuracy significant parts of approximately one third of all known protein sequences. The use of individual comparative models in biology is already rewarding and increasingly widespread. A major new challenge for comparative modeling is the integration of it with the torrents of data from genome sequencing projects as well as from functional and structural genomics. In particular, there is a need to develop an automated, rapid, robust, sensitive, and accurate comparative modeling pipeline applicable to whole genomes. Such large-scale modeling is likely to encourage new kinds of applications for the many resulting models, based on their large number and completeness at the level of the family, organism, or functional network.

Experimental study of solid-liquid-type transitions in vibrated granular layers and the relation with surface waves

From pressure and surface dilation measurements, we show that a solid-liquid-type transition occurs at low excitation frequencies in vertically vibrated granular layers. This transition precedes subharmonic bifurcations from flat surface to standing wave patterns, indicating that these waves are in fact associated with the fluidlike behavior of the layer. At higher frequencies we show that another kind of subharmonic waves can be distinguished. These waves do not involve any lateral transfer of grains within the layer, and correspond to excitations for which the layer slightly bends alternately in time and space. These bending waves have very low amplitude, and we observe them in a vibrated two-dimensional layer of photoelastic particles.

Protein structure modeling for structural genomics

The shapes of most protein sequences will be modeled based on their similarity to experimentally determined protein structures. The current role, limitations, challenges and prospects for protein structure modeling (using information about genes and genomes) are discussed in the context of structural genomics.

Surface spiral waves in a filamentary vortex

Spiral surface waves emitted from a vertical vortex are studied experimentally. It is found that, similar to what occurs in the scattered wave of electrons for the Aharonov-Bohm effect, the number of arms of these waves is linked to circulation flux and therefore to the number of dislocations in the wave front.

Crescent singularities and stress focusing in a buckled thin sheet: mechanics of developable cones

The localization of deformation is a simple consequence of the fact that bending a thin sheet is energetically cheaper than stretching it. In this paper we investigate conical singularities that appear on a crumpled sheet and called developable cones (d cones). We found that for a sample of a finite thickness the singularity is never pointlike but has a spatial extension in the form of a crescent. A further deformation of the d cone leads to a transition to a plastic deformation equivalent to a decrease in the singularity size characterized from curvature and profile analysis. The crescent radius of curvature is measured both at small deformations and at large deformations. It is found that, during the buckling process, the curvature of the crescent exhibits two different scalings versus the deformation. From the cone profile, we measured the reaction force of the plate to deformation; and from force measurements, the energy that is necessary to create the singularity is characterized.

Therapeutic effects of different doses of botulinum toxin in chronic anal fissure

PURPOSE

The aim of this study was to evaluate the clinical and manometric results of three different doses of botulinum toxin and two methods of injection for the treatment of chronic idiopathic anal fissure.

METHODS

Sixty-nine patients with chronic anal fissure were included in a non-randomized, prospective trial of intrasphincteric injection of botulinum toxin. All patients reported postdefecatory anal pain lasting more than two months. Scoring systems were developed for anal pain, bleeding, and defecatory difficulty. Maximum resting and squeeze anal pressures were determined before and one month after treatment. Twenty-three patients undergoing a 5-U injection of diluted botulinum toxin A (BOTOX) on each side of the anal sphincter (total dose, 10 U) constituted the first group. In a second group 27 patients were injected as previously described, with an additional 5-U injection below the fissure (total dose, 15 U). The 19 patients constituting the third group received a 7-U injection on each side of the anus and below the fissure (total dose, 21 U). All patients were followed up for at least six months.

RESULTS

Pain relief one month after treatment was more evident in the second and the third group (48 percent of patients in the first group, 74 percent in the second group, and 100 percent in the third group). A significant reduction of the mean resting pressure was demonstrated only in Groups II and III (P < 0.05), whereas the mean squeeze pressure significantly decreased in the three groups (P < 0.01 in Group I and P < 0.001 in Groups II and III). Fifty-two percent of the patients in the first group, 30 percent in the second group, and 37 percent in the third group were reinjected during the follow-up period, because of persistence of symptomatology or early relapse. The need for surgery was similar in the first and the second group (17 and 19 percent, respectively) and clearly lower in the last group (5 percent). No serious complications or incontinence attributable to this therapeutic modality developed in any patient.

CONCLUSIONS

Intrasphincteric injection of botulinum toxin is a reliable new option in the treatment of uncomplicated chronic anal fissure. The healing rate is related to the dose and probably to the number of puncture sites. No permanent damage to the continence mechanism was detected in these patients.

[Importance of J. Brazy's neurobiological index. Prediction of the number and severity of complications in very low birth weight infants]

The objective of this study was to evaluate the neurodevelopment outcome of Very-Low-Birth-Weight Infants (VLBW), between 1987 and 1993, and correlate these findings with J.Brazy's Neurobiologic Risk Score (NBRS). The minimum corrected age at follow-up was 12 months. The neurodevelopmental assessment was performed using Mary Sheridan and Ruth Griffiths scales, Auditory and Visual Brainstem Evoked Responses and Stycar test. The NBRS was applied to 77 children. According to the score, three groups of risk were defined: Low < or = 4; Intermediate 5-7; High > or = 8. We obtained the following results: children with NBRS < 4, 20% had handicaps (5% of which major); children with NBRS 5-7, 41% had handicaps (23% of which major); in children with NBRS > 8, 95% had handicaps (80% of which major). The incidence of handicaps, (all grades included) was 71.4% for those weighing less than 1000 gr at birth, and 39.2% for those weighing 1000-1499 gr at birth. Major handicaps, mainly motor deficits, occurred in 26.8% of VLBW infants and minor to moderate handicaps were observed in 18.3% of patients in this group. These results were compared to J.Brazy's originals. We concluded that the NBRS, which is simple and objective to perform, is a good predictor of subsquent abnormal development in VLBW infants, allowing the infant's integration as soon as possible in high-risk follow-up programs, to place as soon as possible.

Assessing protein structures with a non-local atomic interaction energy

We describe a new approach, based on the energy of non-local interactions, to assess protein structures. The method uses a very sensitive and accurate atomic mean force potential (AMFP) to calculate the non-local energy profile (NL-profile) of a proteins structure. Several protein models, built using the comparative modeling technique and containing several errors, were evaluated. These models exhibit a good stereochemistry and have been previously checked with different, widely used, methods that failed to detect the errors. The AMFP-derived energy profiles are able to correlate high scores with point errors and misalignments in the models. The point errors are frequently found in loops or regions of structural differences between the template and the target protein. The misalignments are clearly detected with very high scores. The performance of the method was also tested for the assessment of X-ray solved protein structures. In a data set of 143 well solved and non-redundant protein structures, we find that the average energy Z-scores, obtained from AMFP, increase as the resolution decreases. In the case of structures that have already been described as having an unusual stereochemistry, very high Z-scores are obtained. Moreover, energy calculations for some pairs of obsolete and replacement proteins always show higher Z-scores for the obsolete proteins. Finally, two particular cases show the usefulness of the profiles in the assessment of X-ray solved protein structures. First, the NL-profile of a protein structure refined in the incorrect space group has very high scores in several regions. One region has already been described to be out-of-register with the density map of the structure. The NL-profile of the re-refined structure with the correct space group is vastly improved. In the second case, the method is able to accurately point out disordered residues, even if the atoms of these residues do not violate the sum of the van der Waals radii. ANOLEA, the program used to calculate the NL-profile of a protein structure containing one or more chains is accessible through the World Wide Web at: http://www.fundp.ac.be/pub/ANOLEA.html.

[Agenesis of the vagina]

In the last 10 years we treated ten patients with the diagnosis of vaginal agenesia. The reconstruction was performed according to the McIndoe procedure. The medical records of these patients were retrospectively reviewed in what concerns the diagnosis (Mayer-Rokitansky S.-7, Androgenital S.-1, Testicular feminization S.-1), classification, treatment, complications, and outcome. It is the authors' opinion that the McIndoe method is the most appropriate for the treatment of vaginal agenesia, because of its simplicity, low morbidity and absence of mortality.

ANOLEA: a www server to assess protein structures

ANOLEA (Atomic Non-Local Environment Assessment) is a www server that performs energy calculations at the atomic level in protein structures. The calculations involve the non-local interactions between all the heavy atoms of the twenty standard amino acids in the molecule. The input of the server is a PDB file containing one or more protein chains. The output is an energy profile, which gives an energy value for each amino acid of the protein. High energy zones (HEZs) in the profile correlate with errors or with potential interacting zones of proteins. The output of the server also displays the structure in three dimensions, pointing out the high energy amino acids in the protein. This option requires the CHIME plug-in, which is freely available on Internet and makes possible, in real time, to rotate, translate and change the point of view and presentation of the molecule in three dimensions. Thus, a fast analysis of a protein structure can be done using a personal computer connected to Internet. The server is available at: http:@www.fundp.ac.be/pub/ANOLEA.html.

Novel knowledge-based mean force potential at atomic level

We present a new approach at the atomic level for the development of knowledge-based mean force potentials (MFPs) that can be used in fold recognition, ab initio structure prediction, comparative modelling and molecular recognition. Our method is based on atom-type definitions, raising the total frequency of the pairwise distributions and leading to very accurate and specific distance-dependent energy functions. Forty different heavy atom types were defined depending on their bond connectivity, chemical nature and location level (side-chain or backbone). Using this approach it has been possible to obtain average frequencies of pairwise contacts about 15 times higher than the ones obtained using the classic way of one heavy atom definition for each amino acid (i.e. alpha-carbon, beta-carbon, virtual centroid or virtual beta-carbon co-ordinates). In this paper we use this approach to develop a MFP that can be used in fold recognition and we compare it with a classic MFP at the amino acid level compiled from the alpha-carbon distances between the different amino acid pairs. Both potentials involve all the pairwise contacts extracted from a non-redundant folds database of 180 protein chains with a sequence identity threshold of 25%. The pairwise energy functions of the MFP at the atomic level have a deep and very well defined minimum for each pairwise interaction, in contrast to the same curves obtained from the MFP developed at the amino acid level, which generally have multiple minima with similar depth. Our results also show that this MFP is able to produce very similar energy profiles for couples of proteins that share a very low sequence identity but are closely related at the structural level. When these profiles are plotted considering the structure-structure alignment, they are mostly superimposed, showing a correlation with the structure-structure similarity. In the same test, the MFP at the amino acid level fails to produce similar profiles. We suggest that using this MFP at the atomic level in the last stages of fold recognition or threading, when some candidates are available, can improve the sequence-structure alignments and, therefore, the final models. We also discuss the possibility of using this approach in the development of new MFPs to be used in ab initio structure prediction, comparative modelling and molecular recognition procedures.

Synthesis and processing of glypican during differentiation of skeletal muscle cells

We identified previously a glycosylphosphatidylinositol (GPI)-anchored heparan sulfate proteoglycan (HSPG) releasable by phosphatidylinositol-specific phospholipase C (PI-PLC) on the surface of differentiated skeletal muscle cells (Campos et al., Eur. J. Biochem. 216, 587-595 (1993)) which is homologous to the HSPG synthesized by fibroblasts and Schwann cells called glypican. In this study we have evaluated the processing, location and amount of this HSPG in skeletal muscle cells during differentiation. Immunoprecipitation of incubation medium obtained from differentiated cells incubated with [35S]sulfate by specific antibodies against glypican isolated from Schwann cells demonstrated that the antisera precipitated an intact HSPG. Immunoblot analysis of the proteins released by PI-PLC after heparitinase treatment revealed the presence of a main band of 64 and a faint band of 62 kDa, whereas the sizes of the core proteins for glypican present in the incubation media were 62 and 59 kDa. Pulse-chase experiments indicated that glypican present in the membrane was spontaneously released into the culture medium with a t1/2 of 12 h. The level of expression of glypican was analyzed during in vitro differentiation. The specific amount of the PI-PLC releasable HSPG increased about fourfold during cell differentiation. No changes were detected in the level of the mRNA for glypican. Indirect analysis revealed that in myotubes glypican is present on the cell surface as well as associated with the extracellular matrix (ECM). These results indicate that glypican is present, at least, in two different compartments on the surface of skeletal muscle cells.

Extracellular matrix is required for skeletal muscle differentiation but not myogenin expression

Skeletal muscle cells are a useful model for studying cell differentiation. Muscle cell differentiation is marked by myoblast proliferation followed by progressive fusion to form large multinucleated myotubes that synthesize muscle-specific proteins and contract spontaneously. The molecular analysis of myogenesis has advanced with the identification of several myogenic regulatory factors, including myod1, myd, and myogenin. These factors regulate each other's expression and that of muscle-specific proteins such as the acetylcholine receptor and acetylcholinesterase (AChE). In order to investigate the role of extracellular matrix (ECM) in myogenesis we have cultured myoblasts (C2C12) in the presence or absence of an exogenous ECM (Matrigel). In addition, we have induced differentiation of myoblasts in the presence or absence of Matrigel and/or chlorate, a specific inhibitor of proteoglycan sulfation. Our results indicated that the formation of fused myotubes and expression of AChE was stimulated by Matrigel. Treatment of myoblasts induced to differentiate with chlorate resulted in an inhibition of cell fusion and AChE activity. Chlorate treatment was also found to inhibit the deposition and assembly of ECM components such fibronectin and laminin. The expression of myogenin mRNA was observed when myoblasts were induced to differentiate, but was unaffected by the presence of Matrigel or by culture of the cells in the presence of chlorate. These results suggest that the expression of myogenin is independent of the presence of ECM, but that the presence of ECM is essential for the formation of myotubes and the expression of later muscle-specific gene products.

[Auricular fibrillation. Antiarrhythmic treatment revisited]

Atrial fibrillation is one of the most common symptomatic sustained arrhythmias seen in clinical practice. Long-term control of heart rate and maintenance of sinus rhythm often require chronic antiarrhythmic therapy. For patients with disabling symptoms of atrial fibrillation that cannot be controlled with pharmacologic therapy, catheter ablation techniques of the atrioventricular junction and surgical procedures aimed at maintaining sinus rhythm have now been effectively used. The efficacy, risks and limitations of pharmacologic and non-pharmacologic therapies are presented in this review article.

Decorin is specifically solubilized by heparin from the extracellular matrix of rat skeletal muscles

We have previously communicated that heparin co-solubilizes the asymmetric form of acetylcholinesterase (AChE) and a dermatan sulfate proteoglycan from the extracellular matrix (ECM) of rat skeletal muscles. In this report we unequivocally demonstrate by biochemical and immunological analyses that the proteoglycan that is solubilized by heparin from rat skeletal muscle ECM corresponds to decorin. These results support the concept for the role of decorin in the ECM organization.