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Bourgalais J, Mercier X, Al-Mogren MM, Hochlaf M. Accurate Prediction of Adiabatic Ionization Energies for PAHs and Substituted Analogues. J Phys Chem A 2023; 127:8447-8458. [PMID: 37773010 DOI: 10.1021/acs.jpca.3c04088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/30/2023]
Abstract
The accurate calculation of adiabatic ionization energies (AIEs) for polycyclic aromatic hydrocarbons (PAHs) and their substituted analogues is essential for understanding their electronic properties, reactivity, stability, and environmental/health implications. This study demonstrates that the M06-2X density functional theory method excels in predicting the AIEs of polycyclic aromatic hydrocarbons and related molecules, rivaling the (R)CCSD(T)-F12 method in terms of accuracy. These findings suggest that M06-2X, coupled with an appropriate basis set, represents a reliable and efficient method for studying polycyclic aromatic hydrocarbons and related molecules, aligning well with the experimental techniques. The set of molecules examined in this work encompasses numerous polycyclic aromatic hydrocarbons from m/z 67 up to m/z 1,176, containing heteroatoms that may be found in biofuels or nucleic acid bases, making the results highly relevant for photoionization experiments and mass spectrometry. For coronene-derivative molecular species with the C6n2H6n chemical formula, we give an expression to predict their AIEs (AIE (n) = 4.359 + 4.8743n-0.72057, in eV) upon extending the π-aromatic cloud until reaching graphene. In the long term, the application of this method is anticipated to contribute to a deeper understanding of the relationships between PAHs and graphene, guiding research in materials science and electronic applications and serving as a valuable tool for validating theoretical calculation methods.
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Affiliation(s)
| | | | - Muneerah Mogren Al-Mogren
- Department of Chemistry, College of Sciences, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia
| | - Majdi Hochlaf
- Université Gustave Eiffel, COSYS/IMSE, 77454 Champs sur Marne, France
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Liu B, Dong S, Debleza J, Chen W, Xu Q, Wang H, Bourgalais J, Herbinet O, Curran HJ, Battin-Leclerc F, Wang Z. Experimental and Updated Kinetic Modeling Study of Neopentane Low Temperature Oxidation. J Phys Chem A 2023; 127:2113-2122. [PMID: 36815799 DOI: 10.1021/acs.jpca.2c03795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023]
Abstract
Neopentane is an ideal fuel model to study low-temperature oxidation chemistry. The significant discrepancies between experimental data and simulations using the existing neopentane models indicate that an updated study of neopentane oxidation is needed. In this work, neopentane oxidation experiments are carried out using two jet-stirred reactors (JSRs) at 1 atm, at a residence time of 3 s, and at three different equivalence ratios of 0.5, 0.9, and 1.62. Two different analytical methods (synchrotron vacuum ultraviolet photoionization mass spectrometry and gas chromatography) were used to investigate the species distributions. Numerous oxidation intermediates were detected and quantified, including acetone, 3,3-dimethyloxetane, methacrolein, isobutene, 2-methylpropanal, isobutyric acid, and peroxides, which are valuable for validating the kinetic model describing neopentane oxidation. In the model development, the pressure dependencies of the rate constants for the reaction classes Q̇OOH + O2 and Q̇OOH decompositions are considered. This addition improves the prediction of the low-temperature oxidation reactivity of neopentane. Another focus of model development is to improve the prediction of carboxylic acids formed during the low-temperature oxidation of neopentane. The detection and identification of isobutyric acid indicates the existence of the Korcek mechanism during neopentane oxidation. Regarding the formation of acetic acid, the reaction channels are considered to be initiated from the reactions of ȮH radical addition to acetaldehyde/acetone. This updated kinetic model is validated extensively against the experimental data in this work and various experimental data available in the literature, including ignition delay times (IDTs) from both shock tubes (STs) and rapid compression machines (RCMs) and JSR speciation data at high temperatures.
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Affiliation(s)
- Bingzhi Liu
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230029, PR China
| | - Shijun Dong
- Combustion Chemistry Centre, School of Biological and Chemical Sciences, Ryan Institute, MaREI, University of Galway, Galway H91 TK33, Ireland.,School of Energy and Power Engineering, Huazhong University of Science and Technology, Wuhan, Hubei 430074, PR China
| | - Janney Debleza
- LRGP, Université de Lorraine and CNRS, F-54000 Nancy, France
| | - Weiye Chen
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230029, PR China
| | - Qiang Xu
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230029, PR China
| | - Hong Wang
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230029, PR China
| | | | | | - Henry J Curran
- Combustion Chemistry Centre, School of Biological and Chemical Sciences, Ryan Institute, MaREI, University of Galway, Galway H91 TK33, Ireland
| | | | - Zhandong Wang
- National Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230029, PR China.,State Key Laboratory of Fire Science, University of Science and Technology of China, Hefei, Anhui 230026, PR China
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3
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Vin N, Carstensen HH, Herbinet O, Bourgalais J, Alzueta MU, Battin-Leclerc F. A Combined Experimental and Modeling Study on Isopropyl Nitrate Pyrolysis. J Phys Chem A 2023; 127:2123-2135. [PMID: 36821725 DOI: 10.1021/acs.jpca.2c06708] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/25/2023]
Abstract
Alkyl nitrates thermally decompose by homolytic cleavage of the weak nitrate bond at very low temperatures (e.g., around 500 K at reaction times of a few seconds). This provides the opportunity to study the subsequent chemistry of the initially formed radical (or its subsequent pyrolysis products, if unstable) and nitrogen dioxide at such mild conditions. In this work this idea is applied to isopropyl nitrate (iPN) pyrolysis, which is studied in a tubular reactor at atmospheric pressure, temperatures ranging from 373 to 773 K, and residence times of around 2 s. At the experimental conditions, iPN decomposition starts at 473 K with O-N bond fission producing isopropoxy radical (i-C3H7O) and NO2. i-C3H7O is rapidly converted to acetaldehyde (CH3CHO), which is the most abundant product detected, and methyl radicals. Other major products detected are formaldehyde (CH2O), methanol (CH3OH), nitromethane (CH3NO2), NO, methane, formamide (CHONH2), and methyl nitrite (CH3ONO). Four literature nitrogen chemistry models─three of those augmented with iPN specific reactions─have been tested for their ability to predict the iPN decomposition and product profiles. The mechanism by the Curran group performs best, but it still underpredicts the observed high formaldehyde and methanol yields. A rate analysis indicates that the branching ratio of the reaction between methyl radicals and nitrogen dioxide is of significant importance. Based on recent theoretical and experimental data, new rate expressions for the two reactions CH3 + NO2 → CH3O + NO and CH3 + NO2 + He → CH3ONO2 + He are calculated and incorporated in the kinetic models. It is shown that this change clearly improves the predictions, although additional work is needed to achieve good agreement between calculated and measured species profiles.
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Affiliation(s)
- Nicolas Vin
- Université de Lorraine, CNRS, LRGP, Nancy 54000, France
| | - Hans-Heinrich Carstensen
- Fundación Agencia Aragonesa para la Investigación y el Desarrollo (ARAID), Zagaroza 50018, Spain.,Escuela de Ingeniería y Arquitectura, Universidad de Zaragoza, Zaragoza 50018, Spain
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Smith Lewin C, Herbinet O, Battin-Leclerc F, Bourgalais J. Ozone-assisted oxidation of ethylene in a jet-stirred reactor: An experimental and modeling study. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.139986] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Bourgalais J, Carstensen HH, Herbinet O, Garcia GA, Arnoux P, Tran LS, Vanhove G, Nahon L, Hochlaf M, Battin-Leclerc F. Product Identification in the Low-Temperature Oxidation of Cyclohexane Using a Jet-Stirred Reactor in Combination with SVUV-PEPICO Analysis and Theoretical Quantum Calculations. J Phys Chem A 2022; 126:5784-5799. [PMID: 35998573 DOI: 10.1021/acs.jpca.2c04490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Cyclohexane oxidation chemistry was investigated using a near-atmospheric pressure jet-stirred reactor at T = 570 K and equivalence ratio ϕ = 0.8. Numerous intermediates including hydroperoxides and highly oxygenated molecules were detected using synchrotron vacuum ultraviolet photoelectron photoion coincidence spectroscopy. Supported by high-level quantum calculations, the analysis of photoelectron spectra allowed the firm identification of molecular species formed during the oxidation of cyclohexane. Besides, this work validates recently published gas chromatography and synchrotron vacuum ultraviolet photoionization mass spectrometry data. Unambiguous detection of characteristic hydroperoxides (e.g., γ-ketohydroperoxides) and their respective decomposition products provides support for the conventional O2 addition channels up to the third addition and their relative contribution to the cyclohexane oxidation. The results were also compared with the predictions of a recently proposed new detailed kinetic model of cyclohexane oxidation. Most of the predictions are in line with the current experimental findings, highlighting the robustness of the kinetic model. However, the analysis of the recorded slow photoelectron spectra indicating the possible presence of C5 species in the kinetic model provides hints that the substituted cyclopentyl radicals from cyclohexyl ring opening might play a minor role in cyclohexane oxidation. Potentially important missing reactions are also discussed.
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Affiliation(s)
| | - Hans-Heinrich Carstensen
- Thermochemical Processes Group (GPT), Department of Chemical and Environmental Engineering, Engineering and Architecture School, University of Zaragoza, C. Maria de Luna, 50018 Zaragoza, Spain.,Fundacion Agencia Aragonesa para la Investigacion y el Desarrollo (ARAID), Av. de Ranillas, 50018 Zagaroza, Spain
| | | | - Gustavo A Garcia
- Synchrotron SOLEIL, L'Orme des Merisiers, Saint-Aubin-BP 48, F-91192 Gif-sur-Yvette Cedex, France
| | | | - Luc-Sy Tran
- Université Lille, CNRS, UMR 8522─PC2A─Physicochimie des Processus de Combustion et de l'Atmosphère, F-59000 Lille, France
| | - Guillaume Vanhove
- Université Lille, CNRS, UMR 8522─PC2A─Physicochimie des Processus de Combustion et de l'Atmosphère, F-59000 Lille, France
| | - Laurent Nahon
- Synchrotron SOLEIL, L'Orme des Merisiers, Saint-Aubin-BP 48, F-91192 Gif-sur-Yvette Cedex, France
| | - Majdi Hochlaf
- Université Gustave Eiffel, COSYS/LISIS, 5 Bd Descartes, F-77454 Champs-sur-Marne, France
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Bourgalais J, Jiang Z, Bloino J, Herbinet O, Carstensen HH, Garcia GA, Arnoux P, Tran LS, Vanhove G, Nahon L, Battin-Leclerc F, Hochlaf M. Accounting for molecular flexibility in photoionization: case of tert-butyl hydroperoxide. Phys Chem Chem Phys 2022; 24:10826-10837. [PMID: 35485277 DOI: 10.1039/d2cp00929c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
tert-Butyl hydroperoxide (tBuOOH) is a common intermediate in the oxidation of organic compounds that needs to be accurately quantified in complex gas mixtures for the development of chemical kinetic models of low temperature combustion. This work presents a combined theoretical and experimental investigation on the synchrotron-based VUV single photon ionization of gas-phase tBuOOH in the 9.0 - 11.0 eV energy range, including dissociative ionization processes. Computations consist of the determination of the structures, vibrational frequencies and the energetics of neutral and ionic tBuOOH. The Franck-Condon spectrum for the tBuOOH+ (X+) + e- ← tBuOOH (X) + hν transition is computed, where special treatment is undertaken because of the flexibility of tBuOOH, in particular regarding the OOH group. Through comparison of the experimental mass-selected threshold photoelectron spectra with explicitly correlated coupled cluster calculations and Franck-Condon simulations that account for the flexibility of the molecule, an estimation of the ionization energy is given. The appearance energy of the only fragment observed within the above-mentioned energy range, identified as the tert-butyl C4H9+, is also reported. Finally, the signal branching ratio between the parent and the fragment ions is provided as a function of photon energy, essential to quantify tBuOOH in gas-phase oxidation/combustion experiments via advanced mass spectrometry techniques.
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Affiliation(s)
| | | | - Julien Bloino
- SMART Laboratory, Scuola Normale Superiore, Pisa, Italy
| | | | - Hans-Heinrich Carstensen
- Thermochemical Processes Group (GPT), Department of Chemical and Environmental Engineering, Engineering and Architecture School, University of Zaragoza, Spain.,Fundacion Agencia Aragonesa para la Investigacion y el Desarrollo (ARAID), Zagaroza, Spain
| | - Gustavo A Garcia
- Synchrotron SOLEIL, L'Orme des Merisiers, Saint-Aubin-BP 48, 91192 Gif-sur-Yvette Cedex, France
| | | | - Luc-Sy Tran
- PC2A, Université de Lille, CNRS, Avenue Mendeleiev, 59650 Villeneuve-d'Ascq, France
| | - Guillaume Vanhove
- PC2A, Université de Lille, CNRS, Avenue Mendeleiev, 59650 Villeneuve-d'Ascq, France
| | - Laurent Nahon
- Synchrotron SOLEIL, L'Orme des Merisiers, Saint-Aubin-BP 48, 91192 Gif-sur-Yvette Cedex, France
| | | | - Majdi Hochlaf
- Université Gustave Eiffel, COSYS/LISIS, 5 Bd Descartes 77454, Champs sur Marne, France.
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7
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Smith Lewin C, Herbinet O, Garcia GA, Arnoux P, Tran LS, Vanhove G, Nahon L, Battin-Leclerc F, Bourgalais J. Experimental Evidence for the Elusive Ketohydroperoxide Pathway and the Formation of Glyoxal in Ethylene Ozonolysis. Chem Commun (Camb) 2022; 58:13139-13142. [DOI: 10.1039/d2cc05229f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Despite decades of research on alkene ozonolysis, the kinetic network of the archetypal case of ethylene (CH2=CH2) with ozone (O3) still lacks consensus. In this work, experimental evidence of a...
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8
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Bourgalais J, Carrasco N, Vettier L, Comby A, Descamps D, Petit S, Blanchet V, Gaudin J, Mairesse Y, Marty B. Aromatic Formation Promoted by Ion-Driven Radical Pathways in EUV Photochemical Experiments Simulating Titan's Atmospheric Chemistry. J Phys Chem A 2021; 125:3159-3168. [PMID: 33843236 DOI: 10.1021/acs.jpca.1c00324] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In the atmosphere of Titan, Saturn's main satellite, molecular growth is initiated by 85.6 nm extreme ultraviolet (EUV) photons triggering a chemistry with charged and free-radical species. However, the respective contribution of these species to the complexification of matter is far from being known. This work presents a chemical analysis in order to contribute to a better understanding of aromatic formation pathways. A gas mixture of N2/CH4 (90/10%) within the closed SURFACAT reactor was irradiated at a relatively low pressure (0.1 mbar) and room temperature for 6 h by EUV photons (∼85.6 nm). The neutral molecules formed at the end of the irradiation were condensed in a cryogenic trap and analyzed by electron ionization mass spectrometry. An analysis of the dominant chemical pathways highlights the identification of benzene and toluene and underlies the importance of small ion and radical reactions. On the basis of the experimental results, a speculative mechanism based on sequential H-elimination/CH3-addition reactions is proposed for the growth of aromatics in Titan's atmosphere. Elementary reactions to be studied are given to instill future updates of photochemical models of Titan's atmosphere.
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Affiliation(s)
- Jérémy Bourgalais
- LATMOS-IPSL, Université Versailles St-Quentin, CNRS/INSU, Sorbonne Université, UPMC Univ. Paris 06, 11 boulevard d'Alembert, 78280 Guyancourt, France.,Centre de Recherches Pétrographiques et Géochimiques, UMR 7358 CNRS-Université de Lorraine, 15 rue Notre Dame des Pauvres, BP 20, F-54501 Vandoeuvre-lès-Nancy, France
| | - Nathalie Carrasco
- LATMOS-IPSL, Université Versailles St-Quentin, CNRS/INSU, Sorbonne Université, UPMC Univ. Paris 06, 11 boulevard d'Alembert, 78280 Guyancourt, France
| | - Ludovic Vettier
- LATMOS-IPSL, Université Versailles St-Quentin, CNRS/INSU, Sorbonne Université, UPMC Univ. Paris 06, 11 boulevard d'Alembert, 78280 Guyancourt, France
| | - Antoine Comby
- CELIA, Université de Bordeaux - CNRS - CEA, UMR5107, 351 Cours de la Libération, F33405 Talence, France
| | - Dominique Descamps
- CELIA, Université de Bordeaux - CNRS - CEA, UMR5107, 351 Cours de la Libération, F33405 Talence, France
| | - Stéphane Petit
- CELIA, Université de Bordeaux - CNRS - CEA, UMR5107, 351 Cours de la Libération, F33405 Talence, France
| | - Valérie Blanchet
- CELIA, Université de Bordeaux - CNRS - CEA, UMR5107, 351 Cours de la Libération, F33405 Talence, France
| | - Jérôme Gaudin
- CELIA, Université de Bordeaux - CNRS - CEA, UMR5107, 351 Cours de la Libération, F33405 Talence, France
| | - Yann Mairesse
- CELIA, Université de Bordeaux - CNRS - CEA, UMR5107, 351 Cours de la Libération, F33405 Talence, France
| | - Bernard Marty
- Centre de Recherches Pétrographiques et Géochimiques, UMR 7358 CNRS - Université de Lorraine, 15 rue Notre Dame des Pauvres, BP 20, F-54501 Vandoeuvre-lès-Nancy, France
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Durif O, Capron M, Messinger JP, Benidar A, Biennier L, Bourgalais J, Canosa A, Courbe J, Garcia GA, Gil JF, Nahon L, Okumura M, Rutkowski L, Sims IR, Thiévin J, Le Picard SD. A new instrument for kinetics and branching ratio studies of gas phase collisional processes at very low temperatures. Rev Sci Instrum 2021; 92:014102. [PMID: 33514236 DOI: 10.1063/5.0029991] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Accepted: 12/16/2020] [Indexed: 06/12/2023]
Abstract
A new instrument dedicated to the kinetic study of low-temperature gas phase neutral-neutral reactions, including clustering processes, is presented. It combines a supersonic flow reactor with vacuum ultra-violet synchrotron photoionization time-of-flight mass spectrometry. A photoion-photoelectron coincidence detection scheme has been adopted to optimize the particle counting efficiency. The characteristics of the instrument are detailed along with its capabilities illustrated through a few results obtained at low temperatures (<100 K) including a photoionization spectrum of n-butane, the detection of formic acid dimer formation, and the observation of diacetylene molecules formed by the reaction between the C2H radical and C2H2.
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Affiliation(s)
- O Durif
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
| | - M Capron
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
| | - J P Messinger
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - A Benidar
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
| | - L Biennier
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
| | - J Bourgalais
- LATMOS/IPSL, UVSQ, Université Paris-Saclay, UPMC, Univ Paris 06, CNRS, 78280 Guyancourt, France
| | - A Canosa
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
| | - J Courbe
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
| | - G A Garcia
- Synchrotron SOLEIL, L'orme des Merisiers, BP48 St Aubin, 91192 Gif Sur Yvette Cedex, France
| | - J F Gil
- Synchrotron SOLEIL, L'orme des Merisiers, BP48 St Aubin, 91192 Gif Sur Yvette Cedex, France
| | - L Nahon
- Synchrotron SOLEIL, L'orme des Merisiers, BP48 St Aubin, 91192 Gif Sur Yvette Cedex, France
| | - M Okumura
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - L Rutkowski
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
| | - I R Sims
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
| | - J Thiévin
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
| | - S D Le Picard
- Univ Rennes, CNRS, IPR (Institut de Physique de Rennes) - UMR 6251, F-35000 Rennes, France
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Gautier T, Serigano J, Bourgalais J, Hörst SM, Trainer MG. Decomposition of electron ionization mass spectra for space application using a Monte-Carlo approach. Rapid Commun Mass Spectrom 2020; 34:e8684. [PMID: 31783433 DOI: 10.1002/rcm.8684] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Revised: 11/15/2019] [Accepted: 11/26/2019] [Indexed: 06/10/2023]
Abstract
RATIONALE Quadrupole mass spectrometers equipped with an electron ionization (EI) sources have been widely used in space exploration to investigate the composition of planetary surfaces and atmospheres. However, the complexity of the samples and the minimal calibration for the fragmentation of molecules in the ionization chambers have prevented the deconvolution of the majority of the mass spectra obtained at different targets, thus limiting the determination of the exact composition of the samples analyzed. We propose a Monte-Carlo approach to solve this issue mathematically. METHODS We decomposed simulated mass spectra of mixtures acquired with unit resolving power mass spectrometers and EI sources into the sum of the single components fragmentation patterns weighted by their relative concentration using interior-point least-square fitting. To fit compounds with poorly known fragmentation patterns, we used a Monte-Carlo method to vary the intensity of individual fragment ions. We then decomposed the spectrum thousands of times to obtain a statistical distribution. RESULTS By performing the deconvolution on a mixture of seven different molecules with interfering fragmentation patterns (H2 O, O2 , CH4 , Ar, N2 , C2 H4 , and C2 H6 ) we show that this approach retrieves the mixing ratio of the individual components more accurately than regular mass spectra decomposition methods that rely on fragmentation patterns from general databases. It also provides the probability density function for each species's mixing ratio. CONCLUSIONS By removing the solution degeneracy in the decomposition of mass spectra, the method described herein could significantly increase the scientific retrieval from archived space flight mass spectrometry data, where calibration of the ionization source is no longer an option.
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Affiliation(s)
- Thomas Gautier
- LATMOS-IPSL, CNRS, Sorbonne Université, UVSQ - Planetary Sciences, Guyancourt, France
| | - Joseph Serigano
- Johns Hopkins University, Earth and Planetary Sciences, Baltimore, Maryland
| | - Jérémy Bourgalais
- LATMOS-IPSL, CNRS, Sorbonne Université, UVSQ - Planetary Sciences, Guyancourt, France
| | - Sarah M Hörst
- Johns Hopkins University, Earth and Planetary Sciences, Baltimore, Maryland
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11
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Bourgalais J, Gouid Z, Herbinet O, Garcia GA, Arnoux P, Wang Z, Tran LS, Vanhove G, Hochlaf M, Nahon L, Battin-Leclerc F. Isomer-sensitive characterization of low temperature oxidation reaction products by coupling a jet-stirred reactor to an electron/ion coincidence spectrometer: case of n-pentane. Phys Chem Chem Phys 2020; 22:1222-1241. [DOI: 10.1039/c9cp04992d] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Using a tunable vacuum ultraviolet synchrotron beam line and first principle computations, a jet-stirred reactor was coupled for the first time to a photoionization mass spectrometer using electron/ion coincidence imaging.
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Affiliation(s)
- Jérémy Bourgalais
- LATMOS/IPSL
- UVSQ Université Paris-Saclay
- Sorbonne Université
- CNRS
- Guyancourt
| | - Zied Gouid
- Université Gustave Eiffel
- COSYS/LISIS
- Champs sur Marne
- France
| | - Olivier Herbinet
- CNRS
- Université de Lorraine
- Laboratoire Réactions et Génie des Procédés
- UPR 3349
- Nancy F-54000
| | - Gustavo A. Garcia
- Synchrotron SOLEIL
- L’Orme des Merisiers
- 91192 Gif-sur-Yvette Cedex
- France
| | | | - Zhandong Wang
- National Synchrotron Radiation Laboratory
- University of Science and Technology of China
- Hefei
- People's Republic of China
| | - Luc-Sy Tran
- Physicochimie des Processus de Combustion et de l’Atmosphère (PC2A)
- UMR 8522 CNRS
- Université de Lille
- F-59000 Lille
- France
| | - Guillaume Vanhove
- Physicochimie des Processus de Combustion et de l’Atmosphère (PC2A)
- UMR 8522 CNRS
- Université de Lille
- F-59000 Lille
- France
| | - Majdi Hochlaf
- Université Gustave Eiffel
- COSYS/LISIS
- Champs sur Marne
- France
| | - Laurent Nahon
- Synchrotron SOLEIL
- L’Orme des Merisiers
- 91192 Gif-sur-Yvette Cedex
- France
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Bourgalais J, Spencer M, Osborn DL, Goulay F, Le Picard SD. Reactions of Atomic Carbon with Butene Isomers: Implications for Molecular Growth in Carbon-Rich Environments. J Phys Chem A 2016; 120:9138-9150. [PMID: 27798961 DOI: 10.1021/acs.jpca.6b09785] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- J. Bourgalais
- Institut
de Physique de Rennes, Département de Physique Moléculaire, Astrophysique de Laboratoire, UMR CNRS 6251, Université de Rennes 1, Campus de Beaulieu, 35042 Rennes Cedex, France
| | - Michael Spencer
- Department
of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - David L. Osborn
- Combustion
Research Facility, Mail Stop 9055, Sandia National Laboratories, Livermore, California 94551, United States
| | - F. Goulay
- Department
of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - S. D. Le Picard
- Institut
de Physique de Rennes, Département de Physique Moléculaire, Astrophysique de Laboratoire, UMR CNRS 6251, Université de Rennes 1, Campus de Beaulieu, 35042 Rennes Cedex, France
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13
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Bourgalais J, Roussel V, Capron M, Benidar A, Jasper AW, Klippenstein SJ, Biennier L, Le Picard SD. Low Temperature Kinetics of the First Steps of Water Cluster Formation. Phys Rev Lett 2016; 116:113401. [PMID: 27035301 DOI: 10.1103/physrevlett.116.113401] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2015] [Indexed: 06/05/2023]
Abstract
We present a combined experimental and theoretical low temperature kinetic study of water cluster formation. Water cluster growth takes place in low temperature (23-69 K) supersonic flows. The observed kinetics of formation of water clusters are reproduced with a kinetic model based on theoretical predictions for the first steps of clusterization. The temperature- and pressure-dependent association and dissociation rate coefficients are predicted with an ab initio transition state theory based master equation approach over a wide range of temperatures (20-100 K) and pressures (10^{-6}-10 bar).
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Affiliation(s)
- J Bourgalais
- Institut de Physique de Rennes, UMR 6251 CNRS-Université de Rennes 1, 263 avenue Général Leclerc, 35042 Rennes cedex, France
| | - V Roussel
- Institut de Physique de Rennes, UMR 6251 CNRS-Université de Rennes 1, 263 avenue Général Leclerc, 35042 Rennes cedex, France
| | - M Capron
- Institut de Physique de Rennes, UMR 6251 CNRS-Université de Rennes 1, 263 avenue Général Leclerc, 35042 Rennes cedex, France
| | - A Benidar
- Institut de Physique de Rennes, UMR 6251 CNRS-Université de Rennes 1, 263 avenue Général Leclerc, 35042 Rennes cedex, France
| | - A W Jasper
- Combustion Research Facility, Sandia National Laboratories, Livermore, California 94551, USA
| | - S J Klippenstein
- Chemistry Division, Argonne National Laboratory, Argonne, Illinois 60439, USA
| | - L Biennier
- Institut de Physique de Rennes, UMR 6251 CNRS-Université de Rennes 1, 263 avenue Général Leclerc, 35042 Rennes cedex, France
| | - S D Le Picard
- Institut de Physique de Rennes, UMR 6251 CNRS-Université de Rennes 1, 263 avenue Général Leclerc, 35042 Rennes cedex, France
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14
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Hickson KM, Loison JC, Bourgalais J, Capron M, Picard SDL, Goulay F, Wakelam V. THE C(3P) + NH3REACTION IN INTERSTELLAR CHEMISTRY. II. LOW TEMPERATURE RATE CONSTANTS AND MODELING OF NH, NH2, AND NH3ABUNDANCES IN DENSE INTERSTELLAR CLOUDS. ACTA ACUST UNITED AC 2015. [DOI: 10.1088/0004-637x/812/2/107] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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15
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Bourgalais J, Capron M, Kailasanathan RKA, Osborn DL, Hickson KM, Loison JC, Wakelam V, Goulay F, Picard SDL. THE C(3P) + NH3REACTION IN INTERSTELLAR CHEMISTRY. I. INVESTIGATION OF THE PRODUCT FORMATION CHANNELS. ACTA ACUST UNITED AC 2015. [DOI: 10.1088/0004-637x/812/2/106] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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16
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Capron M, Bourgalais J, Abhinavam Kailasanathan RK, Osborn DL, Le Picard SD, Goulay F. Flow tube studies of the C(3P) reactions with ethylene and propylene. Phys Chem Chem Phys 2015; 17:23833-46. [DOI: 10.1039/c5cp03918e] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Product detection studies of C(3P) atom reactions with ethylene, C2H4(X1Ag) and propylene, C3H6(X1A′) are carried out in a flow tube reactor at 332 K and 4 Torr (553.3 Pa) under multiple collision conditions.
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Affiliation(s)
- Michael Capron
- Institut de Physique de Rennes
- Département de Physique Moléculaire
- Astrophysique de Laboratoire
- 35042 Rennes Cedex
- France
| | - Jérémy Bourgalais
- Institut de Physique de Rennes
- Département de Physique Moléculaire
- Astrophysique de Laboratoire
- 35042 Rennes Cedex
- France
| | | | - David L. Osborn
- Combustion Research Facility
- Sandia National Laboratories
- Livermore
- USA
| | - Sébastien D. Le Picard
- Institut de Physique de Rennes
- Département de Physique Moléculaire
- Astrophysique de Laboratoire
- 35042 Rennes Cedex
- France
| | - Fabien Goulay
- Department of Chemistry
- West Virginia University
- Morgantown
- USA
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