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Alex C, Visansirikul S, Zhang Y, Yasomanee JP, Codee J, Demchenko AV. Synthesis of 2-azido-2-deoxy- and 2-acetamido-2-deoxy-D-manno derivatives as versatile building blocks. Carbohydr Res 2019; 488:107900. [PMID: 31901454 DOI: 10.1016/j.carres.2019.107900] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2019] [Revised: 12/20/2019] [Accepted: 12/20/2019] [Indexed: 11/30/2022]
Abstract
Reported herein is the synthesis of a number of building blocks of 2-amino-2-deoxy-d-mannose from common d-glucose precursors.
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Affiliation(s)
- Catherine Alex
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri, 63121, USA
| | - Satsawat Visansirikul
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri, 63121, USA; Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Mahidol University, 447 Sri-Ayuddhaya Road, Rajathevee, Bangkok, 10400, Thailand
| | - Yongzhen Zhang
- Bio-organic Synthesis, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, the Netherlands
| | - Jagodige P Yasomanee
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri, 63121, USA
| | - Jeroen Codee
- Bio-organic Synthesis, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, the Netherlands
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri, 63121, USA.
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2
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Panza M, Civera M, Yasomanee JP, Belvisi L, Demchenko AV. Bromine-Promoted Glycosidation of Conformationally Superarmed Thioglycosides. Chemistry 2019; 25:11831-11836. [PMID: 31286579 DOI: 10.1002/chem.201901969] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2019] [Revised: 07/03/2019] [Indexed: 01/24/2023]
Abstract
Presented herein is a study of the conformation and reactivity of highly reactive thioglycoside donors. The structural studies have been conducted using NMR spectroscopy and computational methods. The reactivity of these donors has been investigated in bromine-promoted glycosylations of aliphatic and sugar alcohols. Swift reaction times, high yields, and respectable 1,2-cis stereoselectivity were observed in a majority of these glycosylations.
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Affiliation(s)
- Matteo Panza
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri, 63121, USA
| | - Monica Civera
- Department of Chemistry, University of Milan, 20133, Milan, Italy
| | - Jagodige P Yasomanee
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri, 63121, USA
| | - Laura Belvisi
- Department of Chemistry, University of Milan, 20133, Milan, Italy
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri, 63121, USA
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3
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Wang T, Nigudkar SS, Yasomanee JP, Rath NP, Stine KJ, Demchenko AV. Glycosyl nitrates in synthesis: streamlined access to glucopyranose building blocks differentiated at C-2. Org Biomol Chem 2019; 16:3596-3604. [PMID: 29693690 DOI: 10.1039/c8ob00477c] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
In an attempt to refine a CAN-mediated synthesis of 1,3,4,6-tetra-O-acetyl-α-d-glucopyranose (2-OH glucose) we unexpectedly discovered that this reaction proceeds via the intermediacy of glycosyl nitrates. Improved mechanistic understanding of this reaction led to the development of a more versatile synthesis of 2-OH glucose from a variety of precursors. Also demonstrated is the conversion of 2-OH glucose into a variety of building blocks differentially protected at C-2, a position that is generally hard to protect regioselectively in the glucopyranose series.
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Affiliation(s)
- Tinghua Wang
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
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4
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Mannino MP, Yasomanee JP, Demchenko AV. Investigation of the H-bond-mediated aglycone delivery reaction in application to the synthesis of β-glucosides. Carbohydr Res 2018; 470:1-7. [PMID: 30286335 PMCID: PMC6215728 DOI: 10.1016/j.carres.2018.09.003] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2018] [Revised: 09/10/2018] [Accepted: 09/10/2018] [Indexed: 01/16/2023]
Abstract
In an attempt to refine the H-bond-mediated Aglycone Delivery (HAD) glycosylation reaction reported herein is the synthesis of β-glucosides using an ethylthio glucoside donor equipped with the remote 6-O-picoloyl substituent. Upon examining various aliphatic, aromatic, and carbohydrate acceptors, it was determined that both electronic and steric factors may greatly affect the stereoselectivity of the HAD reaction with this donor.
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Affiliation(s)
- Michael P. Mannino
- Department of Chemistry and Biochemistry, University of Missouri – St. Louis One University Boulevard, St. Louis, MO 63121, USA Fax: (+) 1-314-516-5342;
| | - Jagodige P. Yasomanee
- Department of Chemistry and Biochemistry, University of Missouri – St. Louis One University Boulevard, St. Louis, MO 63121, USA Fax: (+) 1-314-516-5342;
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry, University of Missouri – St. Louis One University Boulevard, St. Louis, MO 63121, USA Fax: (+) 1-314-516-5342;
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5
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Bandara MD, Yasomanee JP, Rath NP, Pedersen CM, Bols M, Demchenko AV. Conformationally superarmed S-ethyl glycosyl donors as effective building blocks for chemoselective oligosaccharide synthesis in one pot. Org Biomol Chem 2017; 15:559-563. [PMID: 27942674 PMCID: PMC5496005 DOI: 10.1039/c6ob02498j] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
A new series of superarmed glycosyl donors has been investigated. It was demonstrated that the S-ethyl leaving group allows for high reactivity, which is much higher than that of equally equipped S-phenyl glycosyl donors that were previously investigated by our groups. The superarmed S-ethyl glycosyl donors equipped with a 2-O-benzoyl group gave complete β-stereoselectivity. Utility of the new glycosyl donors has been demonstrated in a one-pot one-addition oligosaccharide synthesis with all of the reaction components present from the beginning.
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Affiliation(s)
- Mithila D Bandara
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Jagodige P Yasomanee
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Nigam P Rath
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | | | - Mikael Bols
- Department of Chemistry, University of Copenhagen, 2100 Copenhagen Ø, Denmark
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
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6
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Abstract
Previously we communicated 3,3-difluoroxindole (HOFox) - mediated glycosylations wherein 3,3-difluoro-3H-indol-2-yl (OFox) imidates were found to be key intermediates. Both the in situ synthesis from the corresponding glycosyl bromides and activation of the OFox imidates could be conducted in a regenerative fashion. Herein, we extend this study with the main focus on the synthesis of various OFox imidates and their investigation as glycosyl donors for chemical 1,2-cis and 1,2-trans glycosylation.
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Affiliation(s)
- Swati S Nigudkar
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Tinghua Wang
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Salvatore G Pistorio
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Jagodige P Yasomanee
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Keith J Stine
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
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7
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Yasomanee JP, Visansirikul S, Pornsuriyasak P, Thompson M, Kolodziej SA, Demchenko AV. Synthesis of the Repeating Unit of Capsular Polysaccharide Staphylococcus aureus Type 5 To Study Chemical Activation and Conjugation of Native CP5. J Org Chem 2016; 81:5981-7. [DOI: 10.1021/acs.joc.6b00910] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- Jagodige P. Yasomanee
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Satsawat Visansirikul
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Papapida Pornsuriyasak
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Melissa Thompson
- Analytical R&D, Biotherapeutics Pharmaceutical Sciences, Pfizer, Inc., 700 Chesterfield Parkway W, Chesterfield, Missouri 63017, United States
| | - Stephen A. Kolodziej
- Bioprocess R&D, Biotherapeutics Pharmaceutical Sciences, Pfizer, Inc., 700 Chesterfield Parkway W, Chesterfield, Missouri 63017, United States
| | - Alexei V. Demchenko
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
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8
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Yasomanee JP, Parameswar AR, Pornsuriyasak P, Rath NP, Demchenko AV. 2,3-Di-O-picolinyl building blocks as glycosyl donors with switchable stereoselectivity. Org Biomol Chem 2016; 14:3159-69. [DOI: 10.1039/c6ob00107f] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Coordination of 2,3-di-O-picolinyl protected glycosyl donors with PdBr2 allows to “switch” the stereoselectivity of glycosylations from β- to α-.
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Affiliation(s)
- Jagodige P. Yasomanee
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
| | - Archana R. Parameswar
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
| | - Papapida Pornsuriyasak
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
| | - Nigam P. Rath
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
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9
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Kayastha AK, Jia XG, Yasomanee JP, Demchenko AV. 6-O-Picolinyl and 6-O-Picoloyl Building Blocks As Glycosyl Donors with Switchable Stereoselectivity. Org Lett 2015; 17:4448-51. [DOI: 10.1021/acs.orglett.5b02110] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Abhijeet K. Kayastha
- Department of Chemistry and
Biochemistry, University of Missouri—St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
| | - Xiao G. Jia
- Department of Chemistry and
Biochemistry, University of Missouri—St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
| | - Jagodige P. Yasomanee
- Department of Chemistry and
Biochemistry, University of Missouri—St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V. Demchenko
- Department of Chemistry and
Biochemistry, University of Missouri—St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
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10
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Visansirikul S, Yasomanee JP, Pornsuriyasak P, Kamat MN, Podvalnyy NM, Gobble CP, Thompson M, Kolodziej SA, Demchenko AV. A Concise Synthesis of the Repeating Unit of Capsular Polysaccharide Staphylococcus aureus Type 8. Org Lett 2015; 17:2382-4. [DOI: 10.1021/acs.orglett.5b00899] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Satsawat Visansirikul
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Jagodige P. Yasomanee
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Papapida Pornsuriyasak
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Medha N. Kamat
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Nikita M. Podvalnyy
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Chase P. Gobble
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Melissa Thompson
- Analytical R&D, Biotherapeutics Pharmaceutical Sciences, Pfizer, Inc., 700 Chesterfield Parkway West, Chesterfield, Missouri 63017, United States
| | - Stephen A. Kolodziej
- Bioprocess R&D, Biotherapeutics Pharmaceutical Sciences, Pfizer, Inc., 700 Chesterfield Parkway West, Chesterfield, Missouri 63017, United States
| | - Alexei V. Demchenko
- Department
of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
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11
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Yasomanee JP, Demchenko AV. Hydrogen-Bond-Mediated Aglycone Delivery (HAD): A Highly Stereoselective Synthesis of 1,2-cisα-D-Glucosides from Common Glycosyl Donors in the Presence of Bromine. Chemistry 2015; 21:6572-81. [DOI: 10.1002/chem.201406589] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2014] [Revised: 02/09/2015] [Indexed: 11/06/2022]
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13
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Yasomanee JP, Demchenko AV. Hydrogen bond mediated aglycone delivery: synthesis of linear and branched α-glucans. Angew Chem Int Ed Engl 2014; 53:10453-6. [PMID: 25115776 DOI: 10.1002/anie.201405084] [Citation(s) in RCA: 75] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2014] [Indexed: 01/02/2023]
Abstract
A Hydrogen bond mediated aglycone delivery (HAD) method was applied to the synthesis of α-glucans, which are abundant in nature, but as targets represent a notable challenge to chemists. The synthesis of linear oligosaccharide sequences was accomplished in complete stereoselectivity in all glycosylations. The efficacy of HAD may diminish with the increased bulk of the glycosyl acceptor, and may be an important factor for the syntheses of oligomers beyond pentasaccharides. The synthesis of a branched structure proved more challenging, particularly with bulky trisaccharide acceptors.
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Affiliation(s)
- Jagodige P Yasomanee
- Department of Chemistry and Biochemistry, University of Missouri, St. Louis, One University Boulevard, St. Louis, MO 63121 (USA) http://www.umsl.edu/chemistry/faculty/demchenko.htm
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14
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Abstract
O-Picoloyl groups at remote positions can mediate the course of glycosylation reactions by providing high facial selectivity for the H-bond-mediated attack of the glycosyl acceptor. A new practical method for the stereoselective synthesis of β-mannosides at ambient temperature is presented.
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Affiliation(s)
- Salvatore G Pistorio
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis , One University Boulevard, St. Louis, Missouri 63121, United States
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16
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Yasomanee JP, Demchenko AV. Effect of Remote Picolinyl and Picoloyl Substituents on the Stereoselectivity of Chemical Glycosylation. J Am Chem Soc 2012; 134:20097-102. [DOI: 10.1021/ja307355n] [Citation(s) in RCA: 200] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Jagodige P. Yasomanee
- Department of Chemistry
and Biochemistry, University of Missouri − St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V. Demchenko
- Department of Chemistry
and Biochemistry, University of Missouri − St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
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17
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Kaeothip S, Yasomanee JP, Demchenko AV. Glycosidation of thioglycosides in the presence of bromine: mechanism, reactivity, and stereoselectivity. J Org Chem 2011; 77:291-9. [PMID: 22136383 DOI: 10.1021/jo2019174] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Elaborating on previous studies by Lemieux for highly reactive "armed" bromides, we discovered that β-bromide of the superdisarmed (2-O-benzyl-3,4,6-tri-O-benzoyl) series can be directly obtained from the thioglycoside precursor. When this bromide is glycosidated, α-glycosides form exclusively; however, the yields of such transformations may be low due to the competing anomerization into α-bromide that is totally unreactive under the established reaction conditions.
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Affiliation(s)
- Sophon Kaeothip
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
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